Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072540 | ACJ85286.1 | 93.675 | 332 | 19 | 1 | 1 | 330 | 1 | 332 | 0.0 | 632 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072540 | sp|Q41009|TOC34_PEA | 89.389 | 311 | 30 | 2 | 1 | 309 | 1 | 310 | 0.0 | 565 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072540 | B7FKK2 | 93.675 | 332 | 19 | 1 | 1 | 330 | 1 | 332 | 0.0 | 632 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1072540 | Msa1161650 | 0.802625 | 5.132415e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072540 | MtrunA17_Chr7g0254961 | 94.277 | 332 | 17 | 1 | 1 | 330 | 1 | 332 | 0.0 | 614 |
| Msa1072540 | MtrunA17_Chr3g0126061 | 93.578 | 327 | 20 | 1 | 4 | 330 | 7 | 332 | 0.0 | 598 |
| Msa1072540 | MtrunA17_Chr2g0292751 | 36.475 | 244 | 139 | 6 | 3 | 235 | 667 | 905 | 8.28e-34 | 132 |
| Msa1072540 | MtrunA17_Chr2g0292401 | 37.736 | 212 | 116 | 7 | 36 | 235 | 208 | 415 | 7.51e-33 | 129 |
| Msa1072540 | MtrunA17_Chr8g0380401 | 37.143 | 210 | 118 | 4 | 37 | 235 | 742 | 948 | 2.85e-31 | 124 |
| Msa1072540 | MtrunA17_Chr4g0067361 | 38.389 | 211 | 114 | 5 | 37 | 235 | 623 | 829 | 7.12e-31 | 123 |
| Msa1072540 | MtrunA17_Chr4g0064571 | 30.579 | 242 | 146 | 6 | 37 | 264 | 177 | 410 | 1.95e-22 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072540 | AT5G05000.1 | 66.013 | 306 | 104 | 0 | 2 | 307 | 3 | 308 | 4.93e-155 | 437 |
| Msa1072540 | AT5G05000.2 | 66.013 | 306 | 104 | 0 | 2 | 307 | 3 | 308 | 4.93e-155 | 437 |
| Msa1072540 | AT5G05000.3 | 66.013 | 306 | 104 | 0 | 2 | 307 | 3 | 308 | 4.93e-155 | 437 |
| Msa1072540 | AT1G02280.1 | 60.410 | 293 | 115 | 1 | 6 | 298 | 5 | 296 | 2.99e-130 | 374 |
| Msa1072540 | AT1G02280.2 | 60.410 | 293 | 115 | 1 | 6 | 298 | 5 | 296 | 2.99e-130 | 374 |
| Msa1072540 | AT3G16620.1 | 36.134 | 238 | 138 | 5 | 7 | 235 | 425 | 657 | 1.82e-36 | 140 |
| Msa1072540 | AT2G16640.2 | 36.975 | 238 | 136 | 5 | 7 | 235 | 543 | 775 | 1.42e-35 | 137 |
| Msa1072540 | AT2G16640.1 | 36.975 | 238 | 136 | 5 | 7 | 235 | 543 | 775 | 1.42e-35 | 137 |
| Msa1072540 | AT2G16640.3 | 36.975 | 238 | 136 | 5 | 7 | 235 | 543 | 775 | 1.42e-35 | 137 |
| Msa1072540 | AT4G02510.1 | 36.283 | 226 | 136 | 2 | 18 | 235 | 836 | 1061 | 4.75e-30 | 121 |
| Msa1072540 | AT4G02510.4 | 36.283 | 226 | 136 | 2 | 18 | 235 | 836 | 1061 | 4.75e-30 | 121 |
| Msa1072540 | AT4G02510.3 | 36.283 | 226 | 136 | 2 | 18 | 235 | 836 | 1061 | 4.75e-30 | 121 |
| Msa1072540 | AT4G02510.2 | 36.283 | 226 | 136 | 2 | 18 | 235 | 836 | 1061 | 4.75e-30 | 121 |
| Msa1072540 | AT5G20300.3 | 33.816 | 207 | 124 | 3 | 37 | 235 | 38 | 239 | 6.03e-25 | 105 |
| Msa1072540 | AT5G20300.4 | 33.816 | 207 | 124 | 3 | 37 | 235 | 166 | 367 | 6.44e-25 | 105 |
| Msa1072540 | AT5G20300.1 | 33.816 | 207 | 124 | 3 | 37 | 235 | 166 | 367 | 6.44e-25 | 105 |
| Msa1072540 | AT5G20300.5 | 33.816 | 207 | 124 | 3 | 37 | 235 | 166 | 367 | 6.44e-25 | 105 |
| Msa1072540 | AT5G20300.2 | 33.816 | 207 | 124 | 3 | 37 | 235 | 166 | 367 | 6.44e-25 | 105 |
Find 108 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAACATCATCCTTCTTTA+AGG | 0.099227 | 7_2:-69670009 | None:intergenic |
| AACCAAATTGCTTGAACTTT+TGG | 0.170239 | 7_2:+69668850 | Msa1072540:CDS |
| ATTGATTCTTCAAGGATTTA+TGG | 0.185610 | 7_2:+69672287 | Msa1072540:three_prime_UTR |
| TTCCTATGCCACACGCTAAT+AGG | 0.238595 | 7_2:-69672129 | None:intergenic |
| TCCCAAAAGTTCAAGCAATT+TGG | 0.280508 | 7_2:-69668852 | None:intergenic |
| ATCTATCGTCGCTTCCCTTC+CGG | 0.280823 | 7_2:+69668518 | Msa1072540:five_prime_UTR |
| GGTGACGATTAGTCCCTTTC+AGG | 0.306780 | 7_2:+69669424 | Msa1072540:CDS |
| GTGGAATTAGTGGAACATTA+TGG | 0.310688 | 7_2:+69668772 | Msa1072540:intron |
| AGCAATTTGGTTTGTGTAGC+AGG | 0.313096 | 7_2:-69668839 | None:intergenic |
| TTGATTCTTCAAGGATTTAT+GGG | 0.315515 | 7_2:+69672288 | Msa1072540:three_prime_UTR |
| GGAATTTGTCTGTGATTTAG+AGG | 0.331508 | 7_2:+69672148 | Msa1072540:three_prime_UTR |
| ATGCAATTTCTGTGATTGTT+TGG | 0.334323 | 7_2:-69671620 | None:intergenic |
| TTATGTGAATTCAGTTTGAT+AGG | 0.342439 | 7_2:+69672181 | Msa1072540:three_prime_UTR |
| TAGGATAAGGTGGAGGGTTA+AGG | 0.344222 | 7_2:+69668469 | Msa1072540:five_prime_UTR |
| AAAGCTATTACCGACAGTTT+TGG | 0.350381 | 7_2:+69669855 | Msa1072540:CDS |
| ATGCATCTGGTGGAGAGAAC+TGG | 0.359249 | 7_2:-69669920 | None:intergenic |
| AAGGATTTATGGGTCTTCAT+TGG | 0.364659 | 7_2:+69672298 | Msa1072540:three_prime_UTR |
| TCAACAAAACAGATACAAAA+AGG | 0.364771 | 7_2:-69672076 | None:intergenic |
| TCCTATGCCACACGCTAATA+GGG | 0.365349 | 7_2:-69672128 | None:intergenic |
| CTTAAAGAAGGATGATGTTC+AGG | 0.370155 | 7_2:+69670010 | Msa1072540:CDS |
| TTCTTCCAAATGGGATTGCT+TGG | 0.375270 | 7_2:+69671583 | Msa1072540:CDS |
| TTTCCTCTCTGATTTGGATT+CGG | 0.383451 | 7_2:-69671690 | None:intergenic |
| TCCCCAAGATTGATTCTTCA+AGG | 0.385942 | 7_2:+69672279 | Msa1072540:three_prime_UTR |
| TCCTGTCATATTTGCTCTAC+AGG | 0.390727 | 7_2:+69671722 | Msa1072540:CDS |
| AATCCTTGAAGAATCAATCT+TGG | 0.393813 | 7_2:-69672282 | None:intergenic |
| GCCTTTCCCCATCACAAGTA+TGG | 0.395215 | 7_2:-69669354 | None:intergenic |
| ATCCTTGAAGAATCAATCTT+GGG | 0.396786 | 7_2:-69672281 | None:intergenic |
| CTTGCTCGCGACACCATAAC+AGG | 0.401022 | 7_2:-69669563 | None:intergenic |
| GGAATCCAAGCAATCCCATT+TGG | 0.403774 | 7_2:-69671588 | None:intergenic |
| TGGTGACAGGTTCTTCCAAA+TGG | 0.415072 | 7_2:+69671573 | Msa1072540:intron |
| TCGAAACAGTATACTCTGAT+AGG | 0.420181 | 7_2:+69668450 | Msa1072540:five_prime_UTR |
| TCAACTGTGAACTCTATCAT+TGG | 0.422316 | 7_2:+69669392 | Msa1072540:CDS |
| CAACTGTGAACTCTATCATT+GGG | 0.422468 | 7_2:+69669393 | Msa1072540:CDS |
| CACGTAAAGCAGAACATCTA+TGG | 0.427275 | 7_2:-69669784 | None:intergenic |
| CAACAAGTTCGTGAGTGGTC+TGG | 0.428686 | 7_2:+69668800 | Msa1072540:CDS |
| ATAGATAGATAGAGAGAGAT+GGG | 0.432213 | 7_2:-69668501 | None:intergenic |
| AGGATAAGGTGGAGGGTTAA+GGG | 0.432229 | 7_2:+69668470 | Msa1072540:five_prime_UTR |
| GGAAGGGCCAAGACCTGTTA+TGG | 0.439208 | 7_2:+69669550 | Msa1072540:CDS |
| GTTGACAAGAATTTGATTGA+AGG | 0.442484 | 7_2:+69671666 | Msa1072540:CDS |
| CGTAAAGAGAAGCGTGGTGC+AGG | 0.446680 | 7_2:+69671965 | Msa1072540:CDS |
| CTATTACAAATTATAAAATC+AGG | 0.450237 | 7_2:+69669981 | Msa1072540:CDS |
| TCATCATAAGCCAATGCATC+TGG | 0.455523 | 7_2:-69669933 | None:intergenic |
| GATACTCCTGGTCTTATTGA+AGG | 0.474002 | 7_2:+69669611 | Msa1072540:CDS |
| AATTCATGACATACCTGAAA+GGG | 0.474503 | 7_2:-69669437 | None:intergenic |
| GTTCTCTCCACCAGATGCAT+TGG | 0.475208 | 7_2:+69669923 | Msa1072540:CDS |
| TTCTTGATCAGTGCTTCTAT+AGG | 0.477157 | 7_2:-69671854 | None:intergenic |
| CTGTTCTCAATCAAGACAAC+AGG | 0.482067 | 7_2:-69671424 | None:intergenic |
| AGTAGACAACTTGGATAAGT+TGG | 0.484708 | 7_2:+69669827 | Msa1072540:CDS |
| ATGTTCTGCTTTACGTGGAC+CGG | 0.489258 | 7_2:+69669790 | Msa1072540:CDS |
| CGCGACACCATAACAGGTCT+TGG | 0.490128 | 7_2:-69669557 | None:intergenic |
| CAGTATACTCTGATAGGATA+AGG | 0.495140 | 7_2:+69668456 | Msa1072540:five_prime_UTR |
| GGTGACAGGTTCTTCCAAAT+GGG | 0.497063 | 7_2:+69671574 | Msa1072540:intron |
| ATGGTGTCGCGAGCAAGGGC+TGG | 0.505340 | 7_2:+69669569 | Msa1072540:CDS |
| TGCATCTGGTGGAGAGAACT+GGG | 0.514376 | 7_2:-69669919 | None:intergenic |
| CTCTATCATTGGGGAAAGAG+TGG | 0.517485 | 7_2:+69669403 | Msa1072540:CDS |
| CTACTCGATATGCATCTAAC+CGG | 0.517570 | 7_2:-69669809 | None:intergenic |
| CTCCTTGACCATACTTGTGA+TGG | 0.518881 | 7_2:+69669346 | Msa1072540:CDS |
| ATCAGGTGCATCCTTAAAGA+AGG | 0.519105 | 7_2:+69669998 | Msa1072540:CDS |
| CTGTTATGGTGTCGCGAGCA+AGG | 0.521500 | 7_2:+69669564 | Msa1072540:CDS |
| TGAAGAATCAATCTTGGGGA+TGG | 0.524469 | 7_2:-69672276 | None:intergenic |
| ACCATACTTGTGATGGGGAA+AGG | 0.525719 | 7_2:+69669353 | Msa1072540:CDS |
| AAAGGATGTGTCAGCAGTGA+TGG | 0.526871 | 7_2:-69672058 | None:intergenic |
| ACCTGTAGAGCAAATATGAC+AGG | 0.529529 | 7_2:-69671723 | None:intergenic |
| GTGATGGGGAAAGGCGGTGT+TGG | 0.534363 | 7_2:+69669362 | Msa1072540:CDS |
| ATACTCCTGGTCTTATTGAA+GGG | 0.535356 | 7_2:+69669612 | Msa1072540:CDS |
| CATCTATGGTCTTGTCCAGA+AGG | 0.535370 | 7_2:-69669770 | None:intergenic |
| TCCTTGACCATACTTGTGAT+GGG | 0.544068 | 7_2:+69669347 | Msa1072540:CDS |
| TACTCCTGGTCTTATTGAAG+GGG | 0.552263 | 7_2:+69669613 | Msa1072540:CDS |
| TGCATATCGAGTAGACAACT+TGG | 0.557200 | 7_2:+69669818 | Msa1072540:CDS |
| GATAGATAGATAGAGAGAGA+TGG | 0.557309 | 7_2:-69668502 | None:intergenic |
| TTTATCTTGAATAGTCGGAA+GGG | 0.557686 | 7_2:+69669534 | Msa1072540:intron |
| TCCCTATTAGCGTGTGGCAT+AGG | 0.560088 | 7_2:+69672127 | Msa1072540:three_prime_UTR |
| TGTTATGGTGTCGCGAGCAA+GGG | 0.561068 | 7_2:+69669565 | Msa1072540:CDS |
| TTTCTGTGATTGTTTGGACT+AGG | 0.564078 | 7_2:-69671614 | None:intergenic |
| CCCCATCACAAGTATGGTCA+AGG | 0.568031 | 7_2:-69669348 | None:intergenic |
| TTGAACATTATCGATACTCC+TGG | 0.568301 | 7_2:+69669599 | Msa1072540:CDS |
| ACTCTGATAGGATAAGGTGG+AGG | 0.573574 | 7_2:+69668462 | Msa1072540:five_prime_UTR |
| TGGCACTTGATATCATAAAA+CGG | 0.573744 | 7_2:+69669651 | Msa1072540:CDS |
| TATTCCTTTGCCAAAACTGT+CGG | 0.575835 | 7_2:-69669865 | None:intergenic |
| CTCTGATAGGATAAGGTGGA+GGG | 0.581109 | 7_2:+69668463 | Msa1072540:five_prime_UTR |
| TTTGGGAAAACTCAAACAAG+AGG | 0.582314 | 7_2:+69668868 | Msa1072540:CDS |
| CTCAATCAAGACAACAGGAA+TGG | 0.587478 | 7_2:-69671419 | None:intergenic |
| CAGAAAGAGACGCGTGAAGG+TGG | 0.593888 | 7_2:+69671929 | Msa1072540:CDS |
| CATAGATGTTCTGCTTTACG+TGG | 0.595198 | 7_2:+69669785 | Msa1072540:CDS |
| CAATTCATGACATACCTGAA+AGG | 0.595623 | 7_2:-69669438 | None:intergenic |
| TTGTCTTGATTGAGAACAGT+GGG | 0.596287 | 7_2:+69671428 | Msa1072540:CDS |
| TCATAAGCCAATGCATCTGG+TGG | 0.606653 | 7_2:-69669930 | None:intergenic |
| TCTTGGGAGACACGTGATGT+CGG | 0.608203 | 7_2:+69671902 | Msa1072540:CDS |
| GGAAGAAATGGTTACCGGAA+GGG | 0.613712 | 7_2:-69668532 | None:intergenic |
| ACATCACGTGTCTCCCAAGA+GGG | 0.623468 | 7_2:-69671899 | None:intergenic |
| TATACTCTGATAGGATAAGG+TGG | 0.626587 | 7_2:+69668459 | Msa1072540:five_prime_UTR |
| CATCTCAACAAGTTCGTGAG+TGG | 0.631583 | 7_2:+69668795 | Msa1072540:CDS |
| TGGCAAAGGAATATGGAACA+AGG | 0.632914 | 7_2:+69669875 | Msa1072540:CDS |
| TCCTTGAAGAATCAATCTTG+GGG | 0.635761 | 7_2:-69672280 | None:intergenic |
| AACTGTGAACTCTATCATTG+GGG | 0.637041 | 7_2:+69669394 | Msa1072540:CDS |
| GTGATTGTTTGGACTAGGTG+AGG | 0.644553 | 7_2:-69671609 | None:intergenic |
| CTCCTGGTCTTATTGAAGGG+GGG | 0.648814 | 7_2:+69669615 | Msa1072540:CDS |
| ACTCCTGGTCTTATTGAAGG+GGG | 0.649298 | 7_2:+69669614 | Msa1072540:CDS |
| CCTTGACCATACTTGTGATG+GGG | 0.651438 | 7_2:+69669348 | Msa1072540:CDS |
| CTGCAATCCCTATTAGCGTG+TGG | 0.663426 | 7_2:+69672121 | Msa1072540:three_prime_UTR |
| GACATCACGTGTCTCCCAAG+AGG | 0.672049 | 7_2:-69671900 | None:intergenic |
| GTTCAGAAAGAGACGCGTGA+AGG | 0.686151 | 7_2:+69671926 | Msa1072540:CDS |
| ATACTTGTGATGGGGAAAGG+CGG | 0.699216 | 7_2:+69669356 | Msa1072540:CDS |
| GTTGTCTTGATTGAGAACAG+TGG | 0.701119 | 7_2:+69671427 | Msa1072540:CDS |
| ATAAGGTGGAGGGTTAAGGG+CGG | 0.713125 | 7_2:+69668473 | Msa1072540:five_prime_UTR |
| TCTTGATTGAGAACAGTGGG+AGG | 0.720229 | 7_2:+69671431 | Msa1072540:CDS |
| GGACCGAATCCAAATCAGAG+AGG | 0.731341 | 7_2:+69671687 | Msa1072540:CDS |
| GATACGCGTAAAGAGAAGCG+TGG | 0.744582 | 7_2:+69671959 | Msa1072540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAAATAAAATAAAATT+GGG | - | chr7_2:69668605-69668624 | None:intergenic | 0.0% |
| !! | TTATATAAATAAAATAAAAT+TGG | - | chr7_2:69668606-69668625 | None:intergenic | 0.0% |
| !!! | TTTTCATTATACTAATTATT+AGG | + | chr7_2:69668702-69668721 | Msa1072540:intron | 10.0% |
| !! | TTCAGAATTTATTAAAAAAT+TGG | + | chr7_2:69670489-69670508 | Msa1072540:intron | 10.0% |
| !! | AAGAATTTGTATTTAAAAGA+TGG | + | chr7_2:69669264-69669283 | Msa1072540:intron | 15.0% |
| !! | AGAATTTGTATTTAAAAGAT+GGG | + | chr7_2:69669265-69669284 | Msa1072540:intron | 15.0% |
| !!! | GTGAATCTTTTATTTTTTTT+GGG | + | chr7_2:69669705-69669724 | Msa1072540:intron | 15.0% |
| !! | CTATTACAAATTATAAAATC+AGG | + | chr7_2:69669981-69670000 | Msa1072540:CDS | 15.0% |
| !! | TAATAAATTCTGAATTTCAA+GGG | - | chr7_2:69670483-69670502 | None:intergenic | 15.0% |
| !! | TTAATAAATTCTGAATTTCA+AGG | - | chr7_2:69670484-69670503 | None:intergenic | 15.0% |
| !! | AATATATAAGTAAAACTAGA+AGG | - | chr7_2:69670721-69670740 | None:intergenic | 15.0% |
| !!! | AAAATTACTTTATTTGTGAA+TGG | + | chr7_2:69671189-69671208 | Msa1072540:intron | 15.0% |
| !!! | ATGTTTCTAGTTTTGTTAAA+GGG | + | chr7_2:69668920-69668939 | Msa1072540:intron | 20.0% |
| !! | TTAAAAGTAAAACAAAACCA+AGG | - | chr7_2:69669217-69669236 | None:intergenic | 20.0% |
| !!! | CTATTTTTATCTTGAATAGT+CGG | + | chr7_2:69669529-69669548 | Msa1072540:intron | 20.0% |
| !!! | CGTGAATCTTTTATTTTTTT+TGG | + | chr7_2:69669704-69669723 | Msa1072540:intron | 20.0% |
| !! | AATAAATTCTGAATTTCAAG+GGG | - | chr7_2:69670482-69670501 | None:intergenic | 20.0% |
| !!! | TTGTTCAGTTTTAGAAAAAT+TGG | + | chr7_2:69670879-69670898 | Msa1072540:intron | 20.0% |
| !!! | ATTTTTCTCATTGAATATCT+AGG | - | chr7_2:69670913-69670932 | None:intergenic | 20.0% |
| !!! | TTATTACTTGCTTTAAAAGT+AGG | + | chr7_2:69671228-69671247 | Msa1072540:intron | 20.0% |
| !!! | TATTACTTGCTTTAAAAGTA+GGG | + | chr7_2:69671229-69671248 | Msa1072540:intron | 20.0% |
| !! | GGAAGAATAAAATAAACAAA+AGG | - | chr7_2:69671807-69671826 | None:intergenic | 20.0% |
| ! | GAAACAATTACTAACAATAG+TGG | - | chr7_2:69668672-69668691 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTTGTTCTGTTTG+TGG | + | chr7_2:69668753-69668772 | Msa1072540:intron | 25.0% |
| !!! | CATGTTTCTAGTTTTGTTAA+AGG | + | chr7_2:69668919-69668938 | Msa1072540:intron | 25.0% |
| !! | ATTTTTCGTAATACCAACTA+TGG | + | chr7_2:69669050-69669069 | Msa1072540:intron | 25.0% |
| !!! | TACCAACTATGGTTTTAAAT+TGG | + | chr7_2:69669061-69669080 | Msa1072540:intron | 25.0% |
| !!! | ACCAACTATGGTTTTAAATT+GGG | + | chr7_2:69669062-69669081 | Msa1072540:intron | 25.0% |
| !! | AAACTGAGATGTATTTTTCA+AGG | - | chr7_2:69670063-69670082 | None:intergenic | 25.0% |
| ! | TTTGAAAGTTAAAACTGTCA+AGG | + | chr7_2:69670081-69670100 | Msa1072540:intron | 25.0% |
| ! | TGTATATATAATCAACCAAG+TGG | - | chr7_2:69670178-69670197 | None:intergenic | 25.0% |
| ! | CAATTATAAGAATTGAACCA+GGG | + | chr7_2:69670512-69670531 | Msa1072540:intron | 25.0% |
| ! | ATAAGTAAAACTAGAAGGAA+AGG | - | chr7_2:69670716-69670735 | None:intergenic | 25.0% |
| ! | CAATAAATGATGCAATGTAT+GGG | - | chr7_2:69670760-69670779 | None:intergenic | 25.0% |
| ! | TCAATAAATGATGCAATGTA+TGG | - | chr7_2:69670761-69670780 | None:intergenic | 25.0% |
| !!! | CATTTAGGGTATTTGTTTTA+TGG | + | chr7_2:69671130-69671149 | Msa1072540:intron | 25.0% |
| ! | CAAAAATGAAACTGATGAAA+AGG | + | chr7_2:69671459-69671478 | Msa1072540:CDS | 25.0% |
| ! | TCAGATTAAGCAAGATAAAT+GGG | - | chr7_2:69671536-69671555 | None:intergenic | 25.0% |
| ! | ATCAGATTAAGCAAGATAAA+TGG | - | chr7_2:69671537-69671556 | None:intergenic | 25.0% |
| ! | TCAACAAAACAGATACAAAA+AGG | - | chr7_2:69672079-69672098 | None:intergenic | 25.0% |
| !!! | TCTGTTTTGTTGAATTTAGT+TGG | + | chr7_2:69672086-69672105 | Msa1072540:three_prime_UTR | 25.0% |
| ! | TTATGTGAATTCAGTTTGAT+AGG | + | chr7_2:69672181-69672200 | Msa1072540:three_prime_UTR | 25.0% |
| !! | ATTGATTCTTCAAGGATTTA+TGG | + | chr7_2:69672287-69672306 | Msa1072540:three_prime_UTR | 25.0% |
| ! | TTGATTCTTCAAGGATTTAT+GGG | + | chr7_2:69672288-69672307 | Msa1072540:three_prime_UTR | 25.0% |
| !!! | CAGTTGCTTTATATTTTGAA+TGG | + | chr7_2:69672344-69672363 | Msa1072540:three_prime_UTR | 25.0% |
| ATAGATAGATAGAGAGAGAT+GGG | - | chr7_2:69668504-69668523 | None:intergenic | 30.0% | |
| ATGAAAGTGAAGAAAGACAA+CGG | - | chr7_2:69668569-69668588 | None:intergenic | 30.0% | |
| ! | AACCAAATTGCTTGAACTTT+TGG | + | chr7_2:69668850-69668869 | Msa1072540:CDS | 30.0% |
| ! | ACCAAATTGCTTGAACTTTT+GGG | + | chr7_2:69668851-69668870 | Msa1072540:CDS | 30.0% |
| !!! | CCAACTATGGTTTTAAATTG+GGG | + | chr7_2:69669063-69669082 | Msa1072540:intron | 30.0% |
| !!! | CAACTATGGTTTTAAATTGG+GGG | + | chr7_2:69669064-69669083 | Msa1072540:intron | 30.0% |
| !!! | GTTTTTTTTGTTTCCGCTTT+GGG | + | chr7_2:69669287-69669306 | Msa1072540:intron | 30.0% |
| AATTCATGACATACCTGAAA+GGG | - | chr7_2:69669440-69669459 | None:intergenic | 30.0% | |
| ! | TTTTATCTTGAATAGTCGGA+AGG | + | chr7_2:69669533-69669552 | Msa1072540:intron | 30.0% |
| TTTATCTTGAATAGTCGGAA+GGG | + | chr7_2:69669534-69669553 | Msa1072540:intron | 30.0% | |
| TGGCACTTGATATCATAAAA+CGG | + | chr7_2:69669651-69669670 | Msa1072540:CDS | 30.0% | |
| !!! | GAGATGTATTTTTCAAGGAT+AGG | - | chr7_2:69670058-69670077 | None:intergenic | 30.0% |
| AAATCCAAATACTTCGATTC+CGG | - | chr7_2:69670109-69670128 | None:intergenic | 30.0% | |
| !!! | GTATTTGGATTTTAAGTTCC+TGG | + | chr7_2:69670117-69670136 | Msa1072540:intron | 30.0% |
| ! | TGGATTTTATGATCCATGAA+CGG | + | chr7_2:69670137-69670156 | Msa1072540:intron | 30.0% |
| TAGGAAAACATATCCCTATA+AGG | - | chr7_2:69670227-69670246 | None:intergenic | 30.0% | |
| ! | TTATAGGGATATGTTTTCCT+AGG | + | chr7_2:69670226-69670245 | Msa1072540:intron | 30.0% |
| ! | CAGGGGTGTATTATATAAAT+TGG | - | chr7_2:69670260-69670279 | None:intergenic | 30.0% |
| GTAAATAAAGATTCATGCCT+TGG | + | chr7_2:69670430-69670449 | Msa1072540:intron | 30.0% | |
| GCAATTATAAGAATTGAACC+AGG | + | chr7_2:69670511-69670530 | Msa1072540:intron | 30.0% | |
| TAGTTAGTAACTAGATGCTA+TGG | - | chr7_2:69670625-69670644 | None:intergenic | 30.0% | |
| CATTGCATCATTTATTGATC+TGG | + | chr7_2:69670763-69670782 | Msa1072540:intron | 30.0% | |
| ! | CTCATTGAATATCTAGGTTT+TGG | - | chr7_2:69670907-69670926 | None:intergenic | 30.0% |
| CTAAACTAAGTTATGACACA+CGG | + | chr7_2:69671104-69671123 | Msa1072540:intron | 30.0% | |
| !!! | TTTGTTTTATGGATGTTCTG+TGG | + | chr7_2:69671141-69671160 | Msa1072540:intron | 30.0% |
| !! | TTGTTTTATGGATGTTCTGT+GGG | + | chr7_2:69671142-69671161 | Msa1072540:intron | 30.0% |
| AATGAAACTGATGAAAAGGT+TGG | + | chr7_2:69671463-69671482 | Msa1072540:intron | 30.0% | |
| ATGCAATTTCTGTGATTGTT+TGG | - | chr7_2:69671623-69671642 | None:intergenic | 30.0% | |
| GTTGACAAGAATTTGATTGA+AGG | + | chr7_2:69671666-69671685 | Msa1072540:CDS | 30.0% | |
| ! | CATATTTTTCCTCTCTGATT+TGG | - | chr7_2:69671699-69671718 | None:intergenic | 30.0% |
| CAAATCAGAGAGGAAAAATA+TGG | + | chr7_2:69671697-69671716 | Msa1072540:CDS | 30.0% | |
| !!! | GGGATGGTTTTAATAGTTAA+AGG | - | chr7_2:69672263-69672282 | None:intergenic | 30.0% |
| ATCCTTGAAGAATCAATCTT+GGG | - | chr7_2:69672284-69672303 | None:intergenic | 30.0% | |
| AATCCTTGAAGAATCAATCT+TGG | - | chr7_2:69672285-69672304 | None:intergenic | 30.0% | |
| TCGAAACAGTATACTCTGAT+AGG | + | chr7_2:69668450-69668469 | Msa1072540:five_prime_UTR | 35.0% | |
| CAGTATACTCTGATAGGATA+AGG | + | chr7_2:69668456-69668475 | Msa1072540:five_prime_UTR | 35.0% | |
| TATACTCTGATAGGATAAGG+TGG | + | chr7_2:69668459-69668478 | Msa1072540:five_prime_UTR | 35.0% | |
| GATAGATAGATAGAGAGAGA+TGG | - | chr7_2:69668505-69668524 | None:intergenic | 35.0% | |
| AATTGGGAAGAAATGGTTAC+CGG | - | chr7_2:69668540-69668559 | None:intergenic | 35.0% | |
| ! | GTTGATGAATTGGGAAGAAA+TGG | - | chr7_2:69668547-69668566 | None:intergenic | 35.0% |
| !! | AAGACAACGGTTGATGAATT+GGG | - | chr7_2:69668556-69668575 | None:intergenic | 35.0% |
| !! | AAAGACAACGGTTGATGAAT+TGG | - | chr7_2:69668557-69668576 | None:intergenic | 35.0% |
| GTTGAGAGAAGTAAAATGGT+GGG | - | chr7_2:69668650-69668669 | None:intergenic | 35.0% | |
| AGTGGTTGAGAGAAGTAAAA+TGG | - | chr7_2:69668654-69668673 | None:intergenic | 35.0% | |
| TGTTCTGTTTGTGGAATTAG+TGG | + | chr7_2:69668762-69668781 | Msa1072540:intron | 35.0% | |
| GTGGAATTAGTGGAACATTA+TGG | + | chr7_2:69668772-69668791 | Msa1072540:intron | 35.0% | |
| TCCCAAAAGTTCAAGCAATT+TGG | - | chr7_2:69668855-69668874 | None:intergenic | 35.0% | |
| TTTGGGAAAACTCAAACAAG+AGG | + | chr7_2:69668868-69668887 | Msa1072540:CDS | 35.0% | |
| ACTGTCTGCAATTGTGATTA+TGG | + | chr7_2:69668951-69668970 | Msa1072540:intron | 35.0% | |
| CAGACCACAACTTCAATTAT+AGG | + | chr7_2:69669003-69669022 | Msa1072540:intron | 35.0% | |
| TTCGCCTATAATTGAAGTTG+TGG | - | chr7_2:69669010-69669029 | None:intergenic | 35.0% | |
| ! | CCCCAATTTAAAACCATAGT+TGG | - | chr7_2:69669066-69669085 | None:intergenic | 35.0% |
| AGACCTAAAATCCTGTATGT+TGG | + | chr7_2:69669110-69669129 | Msa1072540:intron | 35.0% | |
| ! | CAACCAACATACAGGATTTT+AGG | - | chr7_2:69669116-69669135 | None:intergenic | 35.0% |
| ! | ATGTTGGTTGTTGTTGCAAT+TGG | + | chr7_2:69669126-69669145 | Msa1072540:intron | 35.0% |
| ! | CCAAGGTTTTTAATCGTGAT+TGG | - | chr7_2:69669200-69669219 | None:intergenic | 35.0% |
| CCAATCACGATTAAAAACCT+TGG | + | chr7_2:69669197-69669216 | Msa1072540:intron | 35.0% | |
| !!! | GGTTTTTTTTGTTTCCGCTT+TGG | + | chr7_2:69669286-69669305 | Msa1072540:intron | 35.0% |
| TCAACTGTGAACTCTATCAT+TGG | + | chr7_2:69669392-69669411 | Msa1072540:CDS | 35.0% | |
| CAACTGTGAACTCTATCATT+GGG | + | chr7_2:69669393-69669412 | Msa1072540:CDS | 35.0% | |
| AACTGTGAACTCTATCATTG+GGG | + | chr7_2:69669394-69669413 | Msa1072540:CDS | 35.0% | |
| CAATTCATGACATACCTGAA+AGG | - | chr7_2:69669441-69669460 | None:intergenic | 35.0% | |
| ! | CTTTCAGGTATGTCATGAAT+TGG | + | chr7_2:69669439-69669458 | Msa1072540:intron | 35.0% |
| TTGAACATTATCGATACTCC+TGG | + | chr7_2:69669599-69669618 | Msa1072540:CDS | 35.0% | |
| !! | ATACTCCTGGTCTTATTGAA+GGG | + | chr7_2:69669612-69669631 | Msa1072540:CDS | 35.0% |
| ! | AAACGGTATGCTTTTATGTC+TGG | + | chr7_2:69669668-69669687 | Msa1072540:intron | 35.0% |
| GAAGGAAGCTACAAGAAAAA+GGG | - | chr7_2:69669755-69669774 | None:intergenic | 35.0% | |
| AGAAGGAAGCTACAAGAAAA+AGG | - | chr7_2:69669756-69669775 | None:intergenic | 35.0% | |
| ! | TTTTTCTTGTAGCTTCCTTC+TGG | + | chr7_2:69669755-69669774 | Msa1072540:intron | 35.0% |
| AGTAGACAACTTGGATAAGT+TGG | + | chr7_2:69669827-69669846 | Msa1072540:CDS | 35.0% | |
| ! | AAAGCTATTACCGACAGTTT+TGG | + | chr7_2:69669855-69669874 | Msa1072540:CDS | 35.0% |
| TATTCCTTTGCCAAAACTGT+CGG | - | chr7_2:69669868-69669887 | None:intergenic | 35.0% | |
| !! | ACAGTTTTGGCAAAGGAATA+TGG | + | chr7_2:69669868-69669887 | Msa1072540:CDS | 35.0% |
| CTGAACATCATCCTTCTTTA+AGG | - | chr7_2:69670012-69670031 | None:intergenic | 35.0% | |
| CTTAAAGAAGGATGATGTTC+AGG | + | chr7_2:69670010-69670029 | Msa1072540:CDS | 35.0% | |
| GTTCATGGATCATAAAATCC+AGG | - | chr7_2:69670138-69670157 | None:intergenic | 35.0% | |
| ! | GGATTTTATGATCCATGAAC+GGG | + | chr7_2:69670138-69670157 | Msa1072540:intron | 35.0% |
| CTATAAGGTTGAGTGCATTT+GGG | - | chr7_2:69670212-69670231 | None:intergenic | 35.0% | |
| CAAATGCACTCAACCTTATA+GGG | + | chr7_2:69670211-69670230 | Msa1072540:intron | 35.0% | |
| ! | ATATGTTTTCCTAGGACACT+TGG | + | chr7_2:69670234-69670253 | Msa1072540:intron | 35.0% |
| ATAATACACCCCTGATGAAA+TGG | + | chr7_2:69670266-69670285 | Msa1072540:intron | 35.0% | |
| TAATACACCCCTGATGAAAT+GGG | + | chr7_2:69670267-69670286 | Msa1072540:intron | 35.0% | |
| !! | CACTTTTTACAAAAGCAGAC+TGG | - | chr7_2:69670358-69670377 | None:intergenic | 35.0% |
| !! | CAGTCTGCTTTTGTAAAAAG+TGG | + | chr7_2:69670356-69670375 | Msa1072540:intron | 35.0% |
| ! | TGGATTTGAAACTGTTGAAC+TGG | + | chr7_2:69670376-69670395 | Msa1072540:intron | 35.0% |
| !! | TCCATAAATGACTTGGTGAT+GGG | - | chr7_2:69670560-69670579 | None:intergenic | 35.0% |
| !! | ATCCATAAATGACTTGGTGA+TGG | - | chr7_2:69670561-69670580 | None:intergenic | 35.0% |
| ACAGAGATCCATAAATGACT+TGG | - | chr7_2:69670567-69670586 | None:intergenic | 35.0% | |
| ! | TGGATCTCTGTTTCTTAGTA+TGG | + | chr7_2:69670576-69670595 | Msa1072540:intron | 35.0% |
| CAAAGATTGAGGATGAAATG+TGG | - | chr7_2:69670834-69670853 | None:intergenic | 35.0% | |
| CAGTTATGAACTAGCACAAT+GGG | - | chr7_2:69670937-69670956 | None:intergenic | 35.0% | |
| ACAGTTATGAACTAGCACAA+TGG | - | chr7_2:69670938-69670957 | None:intergenic | 35.0% | |
| TAATAAAGAAGGCTAGTAGC+AGG | - | chr7_2:69670968-69670987 | None:intergenic | 35.0% | |
| AACGGGTAGAGTAATAAAGA+AGG | - | chr7_2:69670979-69670998 | None:intergenic | 35.0% | |
| ACATTCAACAGAGAACCAAA+AGG | - | chr7_2:69671025-69671044 | None:intergenic | 35.0% | |
| !! | TTTGGTTCTCTGTTGAATGT+TGG | + | chr7_2:69671025-69671044 | Msa1072540:intron | 35.0% |
| ! | TTGGTTCTCTGTTGAATGTT+GGG | + | chr7_2:69671026-69671045 | Msa1072540:intron | 35.0% |
| TATGACACACGGTTTCATTT+AGG | + | chr7_2:69671115-69671134 | Msa1072540:intron | 35.0% | |
| ATGACACACGGTTTCATTTA+GGG | + | chr7_2:69671116-69671135 | Msa1072540:intron | 35.0% | |
| CTCAAAAAAAAGAGAGAACC+TGG | - | chr7_2:69671261-69671280 | None:intergenic | 35.0% | |
| !!! | GGTTCTCTCTTTTTTTTGAG+AGG | + | chr7_2:69671261-69671280 | Msa1072540:intron | 35.0% |
| ! | GTGACTCATAATTTTCATGC+TGG | + | chr7_2:69671365-69671384 | Msa1072540:intron | 35.0% |
| ! | TTTTGCCTTTTCTTAACCCT+AGG | + | chr7_2:69671390-69671409 | Msa1072540:intron | 35.0% |
| TTGTCTTGATTGAGAACAGT+GGG | + | chr7_2:69671428-69671447 | Msa1072540:CDS | 35.0% | |
| !! | GGTTGATAGAAGAGGATATA+AGG | - | chr7_2:69671515-69671534 | None:intergenic | 35.0% |
| !! | GATAAATGGGTTGATAGAAG+AGG | - | chr7_2:69671523-69671542 | None:intergenic | 35.0% |
| TGATTGAGAAAATGTGTGCA+TGG | + | chr7_2:69671553-69671572 | Msa1072540:intron | 35.0% | |
| TTTCTGTGATTGTTTGGACT+AGG | - | chr7_2:69671617-69671636 | None:intergenic | 35.0% | |
| !! | TTTCCTCTCTGATTTGGATT+CGG | - | chr7_2:69671693-69671712 | None:intergenic | 35.0% |
| ! | AGGTAAGCTTTTGAACTTTG+AGG | + | chr7_2:69671742-69671761 | Msa1072540:intron | 35.0% |
| TTCTTGATCAGTGCTTCTAT+AGG | - | chr7_2:69671857-69671876 | None:intergenic | 35.0% | |
| TAATGAGAAAAAGCCCTCTT+GGG | + | chr7_2:69671886-69671905 | Msa1072540:CDS | 35.0% | |
| GGAATTTGTCTGTGATTTAG+AGG | + | chr7_2:69672148-69672167 | Msa1072540:three_prime_UTR | 35.0% | |
| TCCTTGAAGAATCAATCTTG+GGG | - | chr7_2:69672283-69672302 | None:intergenic | 35.0% | |
| AAGGATTTATGGGTCTTCAT+TGG | + | chr7_2:69672298-69672317 | Msa1072540:three_prime_UTR | 35.0% | |
| GGTTGAGAGAAGTAAAATGG+TGG | - | chr7_2:69668651-69668670 | None:intergenic | 40.0% | |
| !! | AGCAATTTGGTTTGTGTAGC+AGG | - | chr7_2:69668842-69668861 | None:intergenic | 40.0% |
| AAATTGGGGGTGATGTATTG+TGG | + | chr7_2:69669077-69669096 | Msa1072540:intron | 40.0% | |
| TGCAACAACAACCAACATAC+AGG | - | chr7_2:69669124-69669143 | None:intergenic | 40.0% | |
| TGTTGTTGCAATTGGAGTTG+CGG | + | chr7_2:69669134-69669153 | Msa1072540:intron | 40.0% | |
| ATTGGTTGCATTGCGAAAGT+TGG | - | chr7_2:69669182-69669201 | None:intergenic | 40.0% | |
| TCCTTGACCATACTTGTGAT+GGG | + | chr7_2:69669347-69669366 | Msa1072540:CDS | 40.0% | |
| GAATTGGTACTTTCCTGTGA+TGG | + | chr7_2:69669455-69669474 | Msa1072540:intron | 40.0% | |
| !! | GATACTCCTGGTCTTATTGA+AGG | + | chr7_2:69669611-69669630 | Msa1072540:CDS | 40.0% |
| !! | TACTCCTGGTCTTATTGAAG+GGG | + | chr7_2:69669613-69669632 | Msa1072540:CDS | 40.0% |
| CACGTAAAGCAGAACATCTA+TGG | - | chr7_2:69669787-69669806 | None:intergenic | 40.0% | |
| CATAGATGTTCTGCTTTACG+TGG | + | chr7_2:69669785-69669804 | Msa1072540:CDS | 40.0% | |
| CTACTCGATATGCATCTAAC+CGG | - | chr7_2:69669812-69669831 | None:intergenic | 40.0% | |
| TGCATATCGAGTAGACAACT+TGG | + | chr7_2:69669818-69669837 | Msa1072540:CDS | 40.0% | |
| !! | ATTACCGACAGTTTTGGCAA+AGG | + | chr7_2:69669861-69669880 | Msa1072540:CDS | 40.0% |
| TGGCAAAGGAATATGGAACA+AGG | + | chr7_2:69669875-69669894 | Msa1072540:CDS | 40.0% | |
| TCATCATAAGCCAATGCATC+TGG | - | chr7_2:69669936-69669955 | None:intergenic | 40.0% | |
| ATCAGGTGCATCCTTAAAGA+AGG | + | chr7_2:69669998-69670017 | Msa1072540:CDS | 40.0% | |
| AGTTAAAACTGTCAAGGCAC+CGG | + | chr7_2:69670087-69670106 | Msa1072540:intron | 40.0% | |
| ATCCATGAACGGGAATACAT+TGG | + | chr7_2:69670148-69670167 | Msa1072540:intron | 40.0% | |
| AACCAATGTATTCCCGTTCA+TGG | - | chr7_2:69670153-69670172 | None:intergenic | 40.0% | |
| ATGAACGGGAATACATTGGT+TGG | + | chr7_2:69670152-69670171 | Msa1072540:intron | 40.0% | |
| CCTATAAGGTTGAGTGCATT+TGG | - | chr7_2:69670213-69670232 | None:intergenic | 40.0% | |
| CCAAATGCACTCAACCTTAT+AGG | + | chr7_2:69670210-69670229 | Msa1072540:intron | 40.0% | |
| ATAAATTGGCCAAGTGTCCT+AGG | - | chr7_2:69670246-69670265 | None:intergenic | 40.0% | |
| AATACACCCCTGATGAAATG+GGG | + | chr7_2:69670268-69670287 | Msa1072540:intron | 40.0% | |
| AAAACTGCCCCATTTCATCA+GGG | - | chr7_2:69670278-69670297 | None:intergenic | 40.0% | |
| AAAAACTGCCCCATTTCATC+AGG | - | chr7_2:69670279-69670298 | None:intergenic | 40.0% | |
| ! | ATTCATTGGTTAACCAGGTC+CGG | - | chr7_2:69670324-69670343 | None:intergenic | 40.0% |
| GACCTGGTTAACCAATGAAT+TGG | + | chr7_2:69670324-69670343 | Msa1072540:intron | 40.0% | |
| ! | GACCAATTCATTGGTTAACC+AGG | - | chr7_2:69670329-69670348 | None:intergenic | 40.0% |
| TAACCAATGAATTGGTCCAG+TGG | + | chr7_2:69670332-69670351 | Msa1072540:intron | 40.0% | |
| ! | ATCACATTTTATGATCGCCC+TGG | - | chr7_2:69670532-69670551 | None:intergenic | 40.0% |
| AGGGCGATCATAAAATGTGA+TGG | + | chr7_2:69670531-69670550 | Msa1072540:intron | 40.0% | |
| TCCCATCACCAAGTCATTTA+TGG | + | chr7_2:69670556-69670575 | Msa1072540:intron | 40.0% | |
| ACAACATCCGCATAAGTAGA+GGG | - | chr7_2:69670863-69670882 | None:intergenic | 40.0% | |
| AACAACATCCGCATAAGTAG+AGG | - | chr7_2:69670864-69670883 | None:intergenic | 40.0% | |
| ACTCTTTACGGAGAGATCAA+CGG | - | chr7_2:69670997-69671016 | None:intergenic | 40.0% | |
| CAAAAGGCTGCTACTCTTTA+CGG | - | chr7_2:69671009-69671028 | None:intergenic | 40.0% | |
| ACAGCATTCTTGCATTCTCA+TGG | + | chr7_2:69671060-69671079 | Msa1072540:intron | 40.0% | |
| CAGCATTCTTGCATTCTCAT+GGG | + | chr7_2:69671061-69671080 | Msa1072540:intron | 40.0% | |
| TTAAAAGTAGGGTTCTGTCC+AGG | + | chr7_2:69671240-69671259 | Msa1072540:intron | 40.0% | |
| AGAAGCCTAGGGTTAAGAAA+AGG | - | chr7_2:69671398-69671417 | None:intergenic | 40.0% | |
| CTCAATCAAGACAACAGGAA+TGG | - | chr7_2:69671422-69671441 | None:intergenic | 40.0% | |
| CTGTTCTCAATCAAGACAAC+AGG | - | chr7_2:69671427-69671446 | None:intergenic | 40.0% | |
| GTTGTCTTGATTGAGAACAG+TGG | + | chr7_2:69671427-69671446 | Msa1072540:CDS | 40.0% | |
| ! | AAGGTTGGAGATTTGCTTCA+TGG | + | chr7_2:69671478-69671497 | Msa1072540:intron | 40.0% |
| TTCTTCCAAATGGGATTGCT+TGG | + | chr7_2:69671583-69671602 | Msa1072540:CDS | 40.0% | |
| TCCTGTCATATTTGCTCTAC+AGG | + | chr7_2:69671722-69671741 | Msa1072540:CDS | 40.0% | |
| ACCTGTAGAGCAAATATGAC+AGG | - | chr7_2:69671726-69671745 | None:intergenic | 40.0% | |
| CTAATGAGAAAAAGCCCTCT+TGG | + | chr7_2:69671885-69671904 | Msa1072540:CDS | 40.0% | |
| ! | CTTCACAGATTTTCACGAGA+AGG | - | chr7_2:69672032-69672051 | None:intergenic | 40.0% |
| TGAAGAATCAATCTTGGGGA+TGG | - | chr7_2:69672279-69672298 | None:intergenic | 40.0% | |
| ! | TCCCCAAGATTGATTCTTCA+AGG | + | chr7_2:69672279-69672298 | Msa1072540:three_prime_UTR | 40.0% |
| ACTCTGATAGGATAAGGTGG+AGG | + | chr7_2:69668462-69668481 | Msa1072540:five_prime_UTR | 45.0% | |
| CTCTGATAGGATAAGGTGGA+GGG | + | chr7_2:69668463-69668482 | Msa1072540:five_prime_UTR | 45.0% | |
| TAGGATAAGGTGGAGGGTTA+AGG | + | chr7_2:69668469-69668488 | Msa1072540:five_prime_UTR | 45.0% | |
| AGGATAAGGTGGAGGGTTAA+GGG | + | chr7_2:69668470-69668489 | Msa1072540:five_prime_UTR | 45.0% | |
| GGAAGAAATGGTTACCGGAA+GGG | - | chr7_2:69668535-69668554 | None:intergenic | 45.0% | |
| CATCTCAACAAGTTCGTGAG+TGG | + | chr7_2:69668795-69668814 | Msa1072540:CDS | 45.0% | |
| !! | TTGTTTCCGCTTTGGGAACT+TGG | + | chr7_2:69669294-69669313 | Msa1072540:intron | 45.0% |
| !! | AACTTGGTGCATGTTTCGTC+TGG | + | chr7_2:69669310-69669329 | Msa1072540:intron | 45.0% |
| CTCCTTGACCATACTTGTGA+TGG | + | chr7_2:69669346-69669365 | Msa1072540:CDS | 45.0% | |
| CCTTGACCATACTTGTGATG+GGG | + | chr7_2:69669348-69669367 | Msa1072540:CDS | 45.0% | |
| ! | ACCATACTTGTGATGGGGAA+AGG | + | chr7_2:69669353-69669372 | Msa1072540:CDS | 45.0% |
| ! | ATACTTGTGATGGGGAAAGG+CGG | + | chr7_2:69669356-69669375 | Msa1072540:CDS | 45.0% |
| CTCTATCATTGGGGAAAGAG+TGG | + | chr7_2:69669403-69669422 | Msa1072540:CDS | 45.0% | |
| ! | ACTTTCCTGTGATGGTTTGC+AGG | + | chr7_2:69669463-69669482 | Msa1072540:intron | 45.0% |
| ! | CTTTCCTGTGATGGTTTGCA+GGG | + | chr7_2:69669464-69669483 | Msa1072540:intron | 45.0% |
| !! | ACTCCTGGTCTTATTGAAGG+GGG | + | chr7_2:69669614-69669633 | Msa1072540:CDS | 45.0% |
| ! | AGGGGGGTACATCAATGATA+TGG | + | chr7_2:69669631-69669650 | Msa1072540:CDS | 45.0% |
| !! | CATCTATGGTCTTGTCCAGA+AGG | - | chr7_2:69669773-69669792 | None:intergenic | 45.0% |
| ATGTTCTGCTTTACGTGGAC+CGG | + | chr7_2:69669790-69669809 | Msa1072540:CDS | 45.0% | |
| TCATAAGCCAATGCATCTGG+TGG | - | chr7_2:69669933-69669952 | None:intergenic | 45.0% | |
| ! | GAATACATTGGTTGGCCACT+TGG | + | chr7_2:69670160-69670179 | Msa1072540:intron | 45.0% |
| AAACTGCCCCATTTCATCAG+GGG | - | chr7_2:69670277-69670296 | None:intergenic | 45.0% | |
| ! | GGCAGTTTTTGAACCCATAC+CGG | + | chr7_2:69670289-69670308 | Msa1072540:intron | 45.0% |
| TGAACCCATACCGGATTATC+CGG | + | chr7_2:69670298-69670317 | Msa1072540:intron | 45.0% | |
| GTGGTGAATCGAAGTTGAAC+TGG | - | chr7_2:69670815-69670834 | None:intergenic | 45.0% | |
| GAGGGAAAGGTCAAAGATTG+AGG | - | chr7_2:69670845-69670864 | None:intergenic | 45.0% | |
| GACCTTTCCCTCTACTTATG+CGG | + | chr7_2:69670853-69670872 | Msa1072540:intron | 45.0% | |
| ATCCGCATAAGTAGAGGGAA+AGG | - | chr7_2:69670858-69670877 | None:intergenic | 45.0% | |
| CTCTTTACGGAGAGATCAAC+GGG | - | chr7_2:69670996-69671015 | None:intergenic | 45.0% | |
| ! | CGTAAAGAGTAGCAGCCTTT+TGG | + | chr7_2:69671007-69671026 | Msa1072540:intron | 45.0% |
| TCTTGATTGAGAACAGTGGG+AGG | + | chr7_2:69671431-69671450 | Msa1072540:CDS | 45.0% | |
| GAAAATGTGTGCATGGTGAC+AGG | + | chr7_2:69671560-69671579 | Msa1072540:intron | 45.0% | |
| TGGTGACAGGTTCTTCCAAA+TGG | + | chr7_2:69671573-69671592 | Msa1072540:intron | 45.0% | |
| GGTGACAGGTTCTTCCAAAT+GGG | + | chr7_2:69671574-69671593 | Msa1072540:intron | 45.0% | |
| GGAATCCAAGCAATCCCATT+TGG | - | chr7_2:69671591-69671610 | None:intergenic | 45.0% | |
| ! | GTGATTGTTTGGACTAGGTG+AGG | - | chr7_2:69671612-69671631 | None:intergenic | 45.0% |
| TTCTTCCTCTCTGCAGTTCT+TGG | + | chr7_2:69671820-69671839 | Msa1072540:intron | 45.0% | |
| GAAAACCAAGAACTGCAGAG+AGG | - | chr7_2:69671828-69671847 | None:intergenic | 45.0% | |
| AAAGGATGTGTCAGCAGTGA+TGG | - | chr7_2:69672061-69672080 | None:intergenic | 45.0% | |
| TCCTATGCCACACGCTAATA+GGG | - | chr7_2:69672131-69672150 | None:intergenic | 45.0% | |
| TTCCTATGCCACACGCTAAT+AGG | - | chr7_2:69672132-69672151 | None:intergenic | 45.0% | |
| ATAAGGTGGAGGGTTAAGGG+CGG | + | chr7_2:69668473-69668492 | Msa1072540:five_prime_UTR | 50.0% | |
| ATCTATCGTCGCTTCCCTTC+CGG | + | chr7_2:69668518-69668537 | Msa1072540:five_prime_UTR | 50.0% | |
| GGGAAGAAATGGTTACCGGA+AGG | - | chr7_2:69668536-69668555 | None:intergenic | 50.0% | |
| CAACAAGTTCGTGAGTGGTC+TGG | + | chr7_2:69668800-69668819 | Msa1072540:CDS | 50.0% | |
| CATGCACCAAGTTCCCAAAG+CGG | - | chr7_2:69669303-69669322 | None:intergenic | 50.0% | |
| GTGCATGTTTCGTCTGGCAT+AGG | + | chr7_2:69669316-69669335 | Msa1072540:intron | 50.0% | |
| CCCCATCACAAGTATGGTCA+AGG | - | chr7_2:69669351-69669370 | None:intergenic | 50.0% | |
| GCCTTTCCCCATCACAAGTA+TGG | - | chr7_2:69669357-69669376 | None:intergenic | 50.0% | |
| ! | GGTGACGATTAGTCCCTTTC+AGG | + | chr7_2:69669424-69669443 | Msa1072540:CDS | 50.0% |
| !! | TGTTATGGTGTCGCGAGCAA+GGG | + | chr7_2:69669565-69669584 | Msa1072540:CDS | 50.0% |
| !! | CTCCTGGTCTTATTGAAGGG+GGG | + | chr7_2:69669615-69669634 | Msa1072540:CDS | 50.0% |
| TACCCCCCTTCAATAAGACC+AGG | - | chr7_2:69669620-69669639 | None:intergenic | 50.0% | |
| TGCATCTGGTGGAGAGAACT+GGG | - | chr7_2:69669922-69669941 | None:intergenic | 50.0% | |
| ATGCATCTGGTGGAGAGAAC+TGG | - | chr7_2:69669923-69669942 | None:intergenic | 50.0% | |
| GTTCTCTCCACCAGATGCAT+TGG | + | chr7_2:69669923-69669942 | Msa1072540:CDS | 50.0% | |
| ! | GGCACCGGAATCGAAGTATT+TGG | + | chr7_2:69670102-69670121 | Msa1072540:intron | 50.0% |
| TGGCCACTGGACCAATTCAT+TGG | - | chr7_2:69670338-69670357 | None:intergenic | 50.0% | |
| ! | TACAAAAGCAGACTGGCCAC+TGG | - | chr7_2:69670351-69670370 | None:intergenic | 50.0% |
| ACAGGAATGGCAGAAGCCTA+GGG | - | chr7_2:69671409-69671428 | None:intergenic | 50.0% | |
| AACAGGAATGGCAGAAGCCT+AGG | - | chr7_2:69671410-69671429 | None:intergenic | 50.0% | |
| GGACCGAATCCAAATCAGAG+AGG | + | chr7_2:69671687-69671706 | Msa1072540:CDS | 50.0% | |
| ACATCACGTGTCTCCCAAGA+GGG | - | chr7_2:69671902-69671921 | None:intergenic | 50.0% | |
| TCTTGGGAGACACGTGATGT+CGG | + | chr7_2:69671902-69671921 | Msa1072540:CDS | 50.0% | |
| GTTCAGAAAGAGACGCGTGA+AGG | + | chr7_2:69671926-69671945 | Msa1072540:CDS | 50.0% | |
| GATACGCGTAAAGAGAAGCG+TGG | + | chr7_2:69671959-69671978 | Msa1072540:CDS | 50.0% | |
| !! | AGAAGCGTGGTGCAGGTTTT+CGG | + | chr7_2:69671972-69671991 | Msa1072540:CDS | 50.0% |
| CTGCAATCCCTATTAGCGTG+TGG | + | chr7_2:69672121-69672140 | Msa1072540:three_prime_UTR | 50.0% | |
| TCCCTATTAGCGTGTGGCAT+AGG | + | chr7_2:69672127-69672146 | Msa1072540:three_prime_UTR | 50.0% | |
| ! | TCCTGTGATGGTTTGCAGGG+TGG | + | chr7_2:69669467-69669486 | Msa1072540:intron | 55.0% |
| ACCACCCTGCAAACCATCAC+AGG | - | chr7_2:69669471-69669490 | None:intergenic | 55.0% | |
| ! | TGTGATGGTTTGCAGGGTGG+TGG | + | chr7_2:69669470-69669489 | Msa1072540:intron | 55.0% |
| GGAAGGGCCAAGACCTGTTA+TGG | + | chr7_2:69669550-69669569 | Msa1072540:CDS | 55.0% | |
| CGCGACACCATAACAGGTCT+TGG | - | chr7_2:69669560-69669579 | None:intergenic | 55.0% | |
| CTTGCTCGCGACACCATAAC+AGG | - | chr7_2:69669566-69669585 | None:intergenic | 55.0% | |
| !! | CTGTTATGGTGTCGCGAGCA+AGG | + | chr7_2:69669564-69669583 | Msa1072540:CDS | 55.0% |
| ATTGGTTAACCAGGTCCGGC+CGG | - | chr7_2:69670320-69670339 | None:intergenic | 55.0% | |
| TCATGCCTTGGCTGCTGCAT+TGG | + | chr7_2:69670442-69670461 | Msa1072540:intron | 55.0% | |
| ! | CCTTGGCTGCTGCATTGGTA+GGG | + | chr7_2:69670447-69670466 | Msa1072540:intron | 55.0% |
| GACATCACGTGTCTCCCAAG+AGG | - | chr7_2:69671903-69671922 | None:intergenic | 55.0% | |
| CAGAAAGAGACGCGTGAAGG+TGG | + | chr7_2:69671929-69671948 | Msa1072540:CDS | 55.0% | |
| ! | CGTAAAGAGAAGCGTGGTGC+AGG | + | chr7_2:69671965-69671984 | Msa1072540:CDS | 55.0% |
| TGGGTGTGGGGGGAGAAAGA+AGG | + | chr7_2:69668410-69668429 | Msa1072540:five_prime_UTR | 60.0% | |
| ! | GTGATGGGGAAAGGCGGTGT+TGG | + | chr7_2:69669362-69669381 | Msa1072540:CDS | 60.0% |
| CCGGCCGGATAATCCGGTAT+GGG | - | chr7_2:69670305-69670324 | None:intergenic | 60.0% | |
| CCCATACCGGATTATCCGGC+CGG | + | chr7_2:69670302-69670321 | Msa1072540:intron | 60.0% | |
| TCCGGCCGGATAATCCGGTA+TGG | - | chr7_2:69670306-69670325 | None:intergenic | 60.0% | |
| ! | GCCTTGGCTGCTGCATTGGT+AGG | + | chr7_2:69670446-69670465 | Msa1072540:intron | 60.0% |
| CCCTACCAATGCAGCAGCCA+AGG | - | chr7_2:69670450-69670469 | None:intergenic | 60.0% | |
| !! | ATGGTGTCGCGAGCAAGGGC+TGG | + | chr7_2:69669569-69669588 | Msa1072540:CDS | 65.0% |
| CCAGGTCCGGCCGGATAATC+CGG | - | chr7_2:69670311-69670330 | None:intergenic | 65.0% | |
| CCGGATTATCCGGCCGGACC+TGG | + | chr7_2:69670308-69670327 | Msa1072540:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 69668408 | 69672368 | 69668408 | ID=Msa1072540;Name=Msa1072540 |
| chr7_2 | mRNA | 69668408 | 69672368 | 69668408 | ID=Msa1072540-mRNA-1;Parent=Msa1072540;Name=Msa1072540-mRNA-1;_AED=0.00;_eAED=0.00;_QI=141|1|1|1|0.85|0.75|8|368|330 |
| chr7_2 | exon | 69668408 | 69668539 | 69668408 | ID=Msa1072540-mRNA-1:exon:15483;Parent=Msa1072540-mRNA-1 |
| chr7_2 | exon | 69668782 | 69668889 | 69668782 | ID=Msa1072540-mRNA-1:exon:15484;Parent=Msa1072540-mRNA-1 |
| chr7_2 | exon | 69669338 | 69669445 | 69669338 | ID=Msa1072540-mRNA-1:exon:15485;Parent=Msa1072540-mRNA-1 |
| chr7_2 | exon | 69669548 | 69669672 | 69669548 | ID=Msa1072540-mRNA-1:exon:15486;Parent=Msa1072540-mRNA-1 |
| chr7_2 | exon | 69669767 | 69670031 | 69669767 | ID=Msa1072540-mRNA-1:exon:15487;Parent=Msa1072540-mRNA-1 |
| chr7_2 | exon | 69671412 | 69671480 | 69671412 | ID=Msa1072540-mRNA-1:exon:15488;Parent=Msa1072540-mRNA-1 |
| chr7_2 | exon | 69671582 | 69671743 | 69671582 | ID=Msa1072540-mRNA-1:exon:15489;Parent=Msa1072540-mRNA-1 |
| chr7_2 | exon | 69671836 | 69672368 | 69671836 | ID=Msa1072540-mRNA-1:exon:15490;Parent=Msa1072540-mRNA-1 |
| chr7_2 | five_prime_UTR | 69668408 | 69668539 | 69668408 | ID=Msa1072540-mRNA-1:five_prime_utr;Parent=Msa1072540-mRNA-1 |
| chr7_2 | five_prime_UTR | 69668782 | 69668790 | 69668782 | ID=Msa1072540-mRNA-1:five_prime_utr;Parent=Msa1072540-mRNA-1 |
| chr7_2 | CDS | 69668791 | 69668889 | 69668791 | ID=Msa1072540-mRNA-1:cds;Parent=Msa1072540-mRNA-1 |
| chr7_2 | CDS | 69669338 | 69669445 | 69669338 | ID=Msa1072540-mRNA-1:cds;Parent=Msa1072540-mRNA-1 |
| chr7_2 | CDS | 69669548 | 69669672 | 69669548 | ID=Msa1072540-mRNA-1:cds;Parent=Msa1072540-mRNA-1 |
| chr7_2 | CDS | 69669767 | 69670031 | 69669767 | ID=Msa1072540-mRNA-1:cds;Parent=Msa1072540-mRNA-1 |
| chr7_2 | CDS | 69671412 | 69671480 | 69671412 | ID=Msa1072540-mRNA-1:cds;Parent=Msa1072540-mRNA-1 |
| chr7_2 | CDS | 69671582 | 69671743 | 69671582 | ID=Msa1072540-mRNA-1:cds;Parent=Msa1072540-mRNA-1 |
| chr7_2 | CDS | 69671836 | 69672000 | 69671836 | ID=Msa1072540-mRNA-1:cds;Parent=Msa1072540-mRNA-1 |
| chr7_2 | three_prime_UTR | 69672001 | 69672368 | 69672001 | ID=Msa1072540-mRNA-1:three_prime_utr;Parent=Msa1072540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
