AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1074440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1074440 MtrunA17_Chr7g0257681 97.015 268 8 0 81 348 1 268 0.0 538
Msa1074440 MtrunA17_Chr1g0173421 67.247 287 73 4 81 348 1 285 2.46e-131 376
Msa1074440 MtrunA17_Chr6g0451591 43.312 157 81 4 82 234 50 202 1.66e-35 129
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1074440 AT2G41835.1 58.451 284 95 5 81 348 1 277 8.20e-110 322
Msa1074440 AT3G57480.2 57.836 268 92 4 81 348 1 247 1.43e-101 300
Msa1074440 AT3G57480.1 57.836 268 92 4 81 348 1 247 1.43e-101 300
Msa1074440 AT3G28210.2 44.231 156 78 4 82 234 5 154 4.87e-35 127
Msa1074440 AT3G28210.1 44.231 156 78 4 82 234 5 154 4.87e-35 127
Msa1074440 AT5G48205.1 54.128 109 22 3 81 186 1 84 2.19e-27 107

Find 104 sgRNAs with CRISPR-Local

Find 615 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTCCCATTTCTGGATTTC+TGG -0.035419 7_2:-72267525 Msa1074440:CDS
AGACGATTCCCTCCCATTTC+TGG 0.113556 7_2:-72267533 Msa1074440:CDS
GTTCATTAAATAATTTATTT+TGG 0.197602 7_2:+72267605 None:intergenic
TGACGTGGTTGAAGTTAAAT+TGG 0.210618 7_2:+72257234 None:intergenic
AATTATTAGAGCGTGGAATT+AGG 0.225673 7_2:-72267560 Msa1074440:CDS
CCCAAACTGTGTTTGGATCT+TGG 0.232007 7_2:+72257509 None:intergenic
TAATTAGAGAATCATAATTT+TGG 0.240465 7_2:+72267583 None:intergenic
AGGAGTGGCGGCAACCAATA+TGG 0.258450 7_2:-72257046 Msa1074440:CDS
AATGAATAGCACTTTCTTGA+TGG 0.275542 7_2:-72256894 Msa1074440:three_prime_UTR
TTCTGGATTTCTGGTTGGTT+GGG 0.311039 7_2:-72267516 Msa1074440:CDS
CTTGCCTAGATCTGGGAATT+CGG 0.320931 7_2:+72267338 None:intergenic
ACATGCTCTACAAGGGAAAC+TGG 0.328561 7_2:+72256968 None:intergenic
TTGGATCTTGGTCTGGAATT+AGG 0.328693 7_2:+72257521 None:intergenic
ACCAAGATCCAAACACAGTT+TGG 0.335125 7_2:-72257510 Msa1074440:CDS
TTTGAGCTTGGTTTGGATCA+TGG 0.341751 7_2:-72267367 Msa1074440:CDS
ATTCTACTACTCGTTGTCTT+TGG 0.343219 7_2:-72267639 Msa1074440:five_prime_UTR
ATTATTAGAGCGTGGAATTA+GGG 0.343452 7_2:-72267559 Msa1074440:CDS
TCTTCGGTTTGAGCTTGGTT+TGG 0.348637 7_2:-72267374 Msa1074440:CDS
GACTTCAAGCCTTCTTGACT+TGG 0.353989 7_2:-72257203 Msa1074440:CDS
CACTTGTGATCGTTGCAATC+AGG 0.365381 7_2:-72267271 Msa1074440:intron
CCCATTTCTGGATTTCTGGT+TGG 0.366874 7_2:-72267521 Msa1074440:CDS
TTCATACATACACCGATATA+CGG 0.368726 7_2:-72256733 Msa1074440:three_prime_UTR
GAGCAATGCTTGCCTAGATC+TGG 0.369502 7_2:+72267330 None:intergenic
AACGGTGACATCTTGTTTGT+TGG 0.370225 7_2:+72257576 None:intergenic
TGACGCTCCCAAACTGTGTT+TGG 0.371562 7_2:+72257502 None:intergenic
AGGATTTCGTTTCTTCTCTT+CGG 0.372070 7_2:-72267390 Msa1074440:CDS
TATGTCCACTTTGTGCTAAA+GGG 0.378295 7_2:-72257549 Msa1074440:CDS
TTTCTGGATTTCTGGTTGGT+TGG 0.383815 7_2:-72267517 Msa1074440:CDS
CAGAAAACCTTTACTGCACT+TGG 0.385251 7_2:+72256994 None:intergenic
GGTCCAGGACATTTGTGATC+AGG 0.386396 7_2:+72257328 None:intergenic
ACACCTTCTTTGCCCCATAT+TGG 0.386967 7_2:+72257032 None:intergenic
TTGTGAATTACGCGGATATA+GGG 0.387535 7_2:+72267477 None:intergenic
TTGAGCTTGGTTTGGATCAT+GGG 0.395085 7_2:-72267366 Msa1074440:CDS
GGAGTGGCGGCAACCAATAT+GGG 0.400426 7_2:-72257045 Msa1074440:CDS
ACCAACCAGAAATCCAGAAA+TGG 0.401843 7_2:+72267520 None:intergenic
CATTGTTTGAAGCACAGGTT+TGG 0.404986 7_2:-72257352 Msa1074440:CDS
ACTAAGGTCTCTCTGCATCC+TGG 0.410212 7_2:+72257415 None:intergenic
ATATGTCCACTTTGTGCTAA+AGG 0.412254 7_2:-72257550 Msa1074440:CDS
TTGACCATTGTTTGAAGCAC+AGG 0.415680 7_2:-72257357 Msa1074440:CDS
TTGCCTAGATCTGGGAATTC+GGG 0.416402 7_2:+72267339 None:intergenic
TACTCGTTGTCTTTGGCAAA+TGG 0.417251 7_2:-72267632 Msa1074440:five_prime_UTR
ATATTAGATTTATTTGATCA+TGG 0.419688 7_2:-72256799 Msa1074440:three_prime_UTR
AGAAGAATCAATCCGTATAT+CGG 0.427532 7_2:+72256721 None:intergenic
TCGGTGTATGTATGAATTGT+AGG 0.428418 7_2:+72256740 None:intergenic
CTAAGGTCTCTCTGCATCCT+GGG 0.434135 7_2:+72257416 None:intergenic
GACGTGGTTGAAGTTAAATT+GGG 0.435317 7_2:+72257235 None:intergenic
ACGGTGACATCTTGTTTGTT+GGG 0.438220 7_2:+72257577 None:intergenic
ACTGTGTTTGGATCTTGGTC+TGG 0.441636 7_2:+72257514 None:intergenic
TCTTCTCTTCGGTTTGAGCT+TGG 0.443261 7_2:-72267379 Msa1074440:CDS
CCCTCTCAACATGCTCTACA+AGG 0.443451 7_2:+72256960 None:intergenic
ATTGTGAATTACGCGGATAT+AGG 0.451113 7_2:+72267476 None:intergenic
GTCTCTCTGCATCCTGGGGC+AGG 0.461132 7_2:+72257421 None:intergenic
CCAAGATCCAAACACAGTTT+GGG 0.466163 7_2:-72257509 Msa1074440:CDS
CTTCTTTGTTGTAATGCTGT+TGG 0.468468 7_2:-72256703 Msa1074440:three_prime_UTR
TGGTACTAGTAATAATCAAC+TGG 0.476635 7_2:-72257143 Msa1074440:CDS
GATTGTGTTTGAGAATACTA+AGG 0.477004 7_2:+72257399 None:intergenic
GCATGCCCCAAGTGCAGTAA+AGG 0.479086 7_2:-72257001 Msa1074440:CDS
TATTAGATTTATTTGATCAT+GGG 0.481987 7_2:-72256798 Msa1074440:three_prime_UTR
GCTTCTAAATTGAGTGGGAT+AGG 0.491672 7_2:-72257181 Msa1074440:CDS
CCAACCAGAAATCCAGAAAT+GGG 0.503012 7_2:+72267521 None:intergenic
ATCCACCAAACTCGTGGCCG+AGG 0.511045 7_2:+72257090 None:intergenic
CAACCAATATGGGGCAAAGA+AGG 0.517022 7_2:-72257035 Msa1074440:CDS
TTCCTCGGCCACGAGTTTGG+TGG 0.518637 7_2:-72257092 Msa1074440:CDS
CTCAAACACAATCAAGTGTA+GGG 0.519840 7_2:-72257389 Msa1074440:CDS
ATTTAGAAGCCAAGTCAAGA+AGG 0.521688 7_2:+72257194 None:intergenic
GGACCTGATCACAAATGTCC+TGG 0.523810 7_2:-72257331 Msa1074440:CDS
AGAAAACCTTTACTGCACTT+GGG 0.532761 7_2:+72256995 None:intergenic
CATGCTCTACAAGGGAAACT+GGG 0.533711 7_2:+72256969 None:intergenic
ACTTGGCTTCTAAATTGAGT+GGG 0.535363 7_2:-72257186 Msa1074440:CDS
TGAGCTTGGTTTGGATCATG+GGG 0.539843 7_2:-72267365 Msa1074440:CDS
CTTCAACCACGTCATCTAAG+TGG 0.540578 7_2:-72257225 Msa1074440:CDS
CCTTGTAGAGCATGTTGAGA+GGG 0.543468 7_2:-72256960 Msa1074440:CDS
ACTCCCGAATTCCCAGATCT+AGG 0.548420 7_2:-72267342 Msa1074440:CDS
GTTGTTCTTGAGAATTGTTG+TGG 0.549442 7_2:-72256928 Msa1074440:exon
GACTTGGCTTCTAAATTGAG+TGG 0.550800 7_2:-72257187 Msa1074440:CDS
AGCAATGCTTGCCTAGATCT+GGG 0.554462 7_2:+72267331 None:intergenic
CAAACCTGTGCTTCAAACAA+TGG 0.566927 7_2:+72257353 None:intergenic
GAGCATGTTGAGAGGGATCA+TGG 0.569049 7_2:-72256953 Msa1074440:CDS
ATGTCCACTTTGTGCTAAAG+GGG 0.570588 7_2:-72257548 Msa1074440:CDS
GAAAACCTTTACTGCACTTG+GGG 0.571579 7_2:+72256996 None:intergenic
TCTCAAACACAATCAAGTGT+AGG 0.571728 7_2:-72257390 Msa1074440:CDS
ATTAGAGCGTGGAATTAGGG+AGG 0.572050 7_2:-72267556 Msa1074440:CDS
CTAATTAAATTATTAGAGCG+TGG 0.572217 7_2:-72267567 Msa1074440:CDS
ATAGGTCAGAGCAGTGGCAG+TGG 0.575939 7_2:-72257163 Msa1074440:CDS
CGCATGATCCACCAAACTCG+TGG 0.584791 7_2:+72257084 None:intergenic
ATTGCAACGATCACAAGTGA+AGG 0.586850 7_2:+72267275 None:intergenic
AGTCTTTGGAATATGAGTAA+TGG 0.594698 7_2:-72257274 Msa1074440:CDS
AATTATGCTCAATATAACTT+CGG 0.599455 7_2:+72257608 None:intergenic
CCCTTGTAGAGCATGTTGAG+AGG 0.611040 7_2:-72256961 Msa1074440:CDS
CCAGAAATCCAGAAATGGGA+GGG 0.613406 7_2:+72267525 None:intergenic
GAAAACTTAGCATCACATAG+TGG 0.613925 7_2:+72257112 None:intergenic
CGAACCCCTTTAGCACAAAG+TGG 0.621156 7_2:+72257544 None:intergenic
AAAGTTCATCAAAGGAGTGG+CGG 0.638449 7_2:-72257058 Msa1074440:CDS
ACCAGAAATCCAGAAATGGG+AGG 0.639433 7_2:+72267524 None:intergenic
TGAAGTCCACTTAGATGACG+TGG 0.643218 7_2:+72257219 None:intergenic
TTGCAACGATCACAAGTGAA+GGG 0.653221 7_2:+72267276 None:intergenic
CCTCTCAACATGCTCTACAA+GGG 0.654661 7_2:+72256961 None:intergenic
TAAGGTCTCTCTGCATCCTG+GGG 0.659577 7_2:+72257417 None:intergenic
GAGTGGCGGCAACCAATATG+GGG 0.665147 7_2:-72257044 Msa1074440:CDS
AATCAAGTGTAGGGACTGTG+AGG 0.678787 7_2:-72257380 Msa1074440:CDS
AGTGGGATAGGTCAGAGCAG+TGG 0.682872 7_2:-72257169 Msa1074440:CDS
GTGGAGAATTGTGAATTACG+CGG 0.729104 7_2:+72267469 None:intergenic
ACAAAGTGGACATATAACAA+CGG 0.739755 7_2:+72257558 None:intergenic
CATGTTGAGAGGGATCATGG+TGG 0.808965 7_2:-72256950 Msa1074440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - chr7_2:72262260-72262279 Msa1074440:intron 0.0%
!! TATATATATATATATATATA+GGG - chr7_2:72262261-72262280 Msa1074440:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr7_2:72262260-72262279 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr7_2:72262261-72262280 None:intergenic 0.0%
!! TATATATATATATATTATAT+TGG - chr7_2:72263402-72263421 Msa1074440:intron 0.0%
!!! GTTCATTAAATAATTTATTT+TGG + chr7_2:72256788-72256807 None:intergenic 10.0%
!! TTTGTTTCAAAATTAATTAA+TGG - chr7_2:72257166-72257185 Msa1074440:CDS 10.0%
!! TTGTTTCAAAATTAATTAAT+GGG - chr7_2:72257167-72257186 Msa1074440:CDS 10.0%
!!! TTATCTTAAATTTTAGTTTT+TGG - chr7_2:72257898-72257917 Msa1074440:intron 10.0%
!!! TTATGTTAAAAATAAGTTTT+AGG - chr7_2:72258869-72258888 Msa1074440:intron 10.0%
!!! TTATATTAAATTTAAGTTCT+TGG - chr7_2:72259610-72259629 Msa1074440:intron 10.0%
!! AAAATAGAAAGAATAAAAAA+AGG + chr7_2:72259969-72259988 None:intergenic 10.0%
!!! CGTTTTTATTTAAAAAAATT+AGG + chr7_2:72260236-72260255 None:intergenic 10.0%
!!! AATTTTTTTAAATAAAAACG+TGG - chr7_2:72260236-72260255 Msa1074440:intron 10.0%
!! TTAAAAATATATATAATGAG+AGG - chr7_2:72261865-72261884 Msa1074440:intron 10.0%
!! AAAAAAATTACAAATGAATA+CGG - chr7_2:72261925-72261944 Msa1074440:intron 10.0%
!! AAAAAAAAAAAAGATTTCAA+TGG + chr7_2:72261984-72262003 None:intergenic 10.0%
!! ATCAAGATTAAATTATAAAT+CGG + chr7_2:72262631-72262650 None:intergenic 10.0%
!!! TATATATATTATATTGGTTT+TGG - chr7_2:72263408-72263427 Msa1074440:intron 10.0%
!!! AACAGATATTTATTAATTTT+TGG - chr7_2:72264585-72264604 Msa1074440:intron 10.0%
!! TATTATATCAGAAAATTAAA+GGG + chr7_2:72265124-72265143 None:intergenic 10.0%
!! TTATTATATCAGAAAATTAA+AGG + chr7_2:72265125-72265144 None:intergenic 10.0%
!!! GTTTTTAATATAGAAATTAT+GGG + chr7_2:72265564-72265583 None:intergenic 10.0%
!!! TGTTTTTAATATAGAAATTA+TGG + chr7_2:72265565-72265584 None:intergenic 10.0%
!!! GTTATTTTCATAAATTATTT+TGG - chr7_2:72266522-72266541 Msa1074440:intron 10.0%
!!! TAATTAGAGAATCATAATTT+TGG + chr7_2:72256810-72256829 None:intergenic 15.0%
!!! ATACTTAAACCTTAAAATTT+TGG - chr7_2:72257470-72257489 Msa1074440:CDS 15.0%
!! ATTGAGGTTAAATAAAAAAA+GGG + chr7_2:72258138-72258157 None:intergenic 15.0%
!! AATTGAGGTTAAATAAAAAA+AGG + chr7_2:72258139-72258158 None:intergenic 15.0%
!!! TTTTATGAGATATACAAATA+AGG + chr7_2:72258564-72258583 None:intergenic 15.0%
!!! TTAAATTGCTTCTAATTTTT+TGG - chr7_2:72259791-72259810 Msa1074440:intron 15.0%
!!! TGAGTTATTGATAATTTTAT+GGG + chr7_2:72259856-72259875 None:intergenic 15.0%
!!! TGATTTGTTTTTTTAGTTTT+TGG - chr7_2:72260342-72260361 Msa1074440:intron 15.0%
!! AATTGACAAAAAAAAAATGT+GGG + chr7_2:72260755-72260774 None:intergenic 15.0%
!! AAATTGACAAAAAAAAAATG+TGG + chr7_2:72260756-72260775 None:intergenic 15.0%
!!! TTTTTATGATCAATAAATCA+TGG - chr7_2:72261227-72261246 Msa1074440:intron 15.0%
!! TGTATTACAAAAAATAAATG+AGG + chr7_2:72261397-72261416 None:intergenic 15.0%
!! TATGACTATAAATACAATAA+TGG - chr7_2:72261454-72261473 Msa1074440:intron 15.0%
!! TGATTAGAATTGTAAATTTA+AGG - chr7_2:72261526-72261545 Msa1074440:intron 15.0%
!!! GTGATGAATATTTTATTATT+AGG + chr7_2:72261952-72261971 None:intergenic 15.0%
!!! CTTTTTTTTTTTTAACCTTT+TGG - chr7_2:72261991-72262010 Msa1074440:intron 15.0%
!! TGATAATAATACATACATAA+AGG + chr7_2:72262146-72262165 None:intergenic 15.0%
!! ATAAAAAAAAACAATTAAGG+AGG + chr7_2:72262429-72262448 None:intergenic 15.0%
!!! TATAATTTAATCTTGATGAT+TGG - chr7_2:72262634-72262653 Msa1074440:intron 15.0%
!!! ATAATTTAATCTTGATGATT+GGG - chr7_2:72262635-72262654 Msa1074440:intron 15.0%
!!! AGGATTTATTTATTTTTTGA+GGG + chr7_2:72262855-72262874 None:intergenic 15.0%
!!! TAGGATTTATTTATTTTTTG+AGG + chr7_2:72262856-72262875 None:intergenic 15.0%
!! ATTTCATAAATGATGAATTA+TGG + chr7_2:72262974-72262993 None:intergenic 15.0%
!!! ATATCATTTCTCTTATTTAT+AGG - chr7_2:72263759-72263778 Msa1074440:intron 15.0%
!!! TATCATTTCTCTTATTTATA+GGG - chr7_2:72263760-72263779 Msa1074440:intron 15.0%
!!! ACGCTTTTTTATTATATATT+AGG + chr7_2:72264098-72264117 None:intergenic 15.0%
!!! ATTAAGAATGAATTTTGAAA+TGG - chr7_2:72265032-72265051 Msa1074440:intron 15.0%
!! ATTATATCAGAAAATTAAAG+GGG + chr7_2:72265123-72265142 None:intergenic 15.0%
!! GTGAATTAAAAAAATTGAAT+TGG - chr7_2:72265317-72265336 Msa1074440:intron 15.0%
!! TTTAAGGAATCAAATTAATA+AGG - chr7_2:72265588-72265607 Msa1074440:intron 15.0%
!! TTGTATATATATATTGGTAT+TGG - chr7_2:72266106-72266125 Msa1074440:intron 15.0%
!!! TATCAGTTTATTTTAGAATA+AGG - chr7_2:72266131-72266150 Msa1074440:intron 15.0%
!! ATATTAGATTTATTTGATCA+TGG - chr7_2:72267591-72267610 Msa1074440:CDS 15.0%
!! TATTAGATTTATTTGATCAT+GGG - chr7_2:72267592-72267611 Msa1074440:exon 15.0%
!! GAAAAAAAATAAATGAGGAA+TGG + chr7_2:72256976-72256995 None:intergenic 20.0%
!!! TTCCTCATTTATTTTTTTTC+TGG - chr7_2:72256976-72256995 Msa1074440:CDS 20.0%
!! TTCCAGAAAAAAAATAAATG+AGG + chr7_2:72256981-72257000 None:intergenic 20.0%
!!! TCATTTATTTTTTTTCTGGA+AGG - chr7_2:72256980-72256999 Msa1074440:CDS 20.0%
!! AGAAAATAATAGAATGAAAC+GGG + chr7_2:72257217-72257236 None:intergenic 20.0%
!! GAGAAAATAATAGAATGAAA+CGG + chr7_2:72257218-72257237 None:intergenic 20.0%
!!! TTTCATTCTATTATTTTCTC+CGG - chr7_2:72257218-72257237 Msa1074440:CDS 20.0%
!!! GAAACAATGTTTTTAATCAA+AGG + chr7_2:72257277-72257296 None:intergenic 20.0%
!!! TGTTTTTAATAACACTAGTA+TGG - chr7_2:72257313-72257332 Msa1074440:CDS 20.0%
!!! GAAGACATTTAAAATAATTG+AGG + chr7_2:72258154-72258173 None:intergenic 20.0%
!!! GTTAGATATTTTACATAATG+TGG - chr7_2:72258248-72258267 Msa1074440:intron 20.0%
!! TAACATGAGAAAAATGAAAA+GGG + chr7_2:72258416-72258435 None:intergenic 20.0%
!! TTAACATGAGAAAAATGAAA+AGG + chr7_2:72258417-72258436 None:intergenic 20.0%
!! TCAATATACATAATATCTGA+AGG - chr7_2:72258696-72258715 Msa1074440:intron 20.0%
!!! GTATTTGAAATAATAGAAGT+TGG + chr7_2:72258926-72258945 None:intergenic 20.0%
!!! TAATTTAATGGATTAGTTGA+AGG + chr7_2:72259087-72259106 None:intergenic 20.0%
!! TGTTCAAAAACATATAAGTT+AGG - chr7_2:72259415-72259434 Msa1074440:intron 20.0%
!! TGTTAAAACATTAGGTATAT+TGG + chr7_2:72259444-72259463 None:intergenic 20.0%
!! ATCGAAAATGTTAAAACATT+AGG + chr7_2:72259452-72259471 None:intergenic 20.0%
!!! TATGATGAACTATTTTTTGT+TGG - chr7_2:72259562-72259581 Msa1074440:intron 20.0%
!!! AACTATTTTTTGTTGGTTTT+TGG - chr7_2:72259569-72259588 Msa1074440:intron 20.0%
!!! GTGAGTTATTGATAATTTTA+TGG + chr7_2:72259857-72259876 None:intergenic 20.0%
!! TATTAGTTAAATTTCTGCAA+TGG - chr7_2:72260157-72260176 Msa1074440:intron 20.0%
!! AAAACAAATCATCATAATGT+TGG + chr7_2:72260333-72260352 None:intergenic 20.0%
!! GAGAGATGTTAAATTAAAAA+AGG + chr7_2:72260679-72260698 None:intergenic 20.0%
!!! TGAAATGTTTTGTTAGTTTT+TGG - chr7_2:72261045-72261064 Msa1074440:intron 20.0%
!! AAAAAAATATGCACAAATTG+TGG - chr7_2:72261290-72261309 Msa1074440:intron 20.0%
!!! ACTATAAATACAATAATGGA+TGG - chr7_2:72261458-72261477 Msa1074440:intron 20.0%
!!! ACCAAATTACATCAAATTTT+GGG + chr7_2:72261658-72261677 None:intergenic 20.0%
!! TATATAATGAGAGGAAATAA+AGG - chr7_2:72261874-72261893 Msa1074440:intron 20.0%
!!! AAATTTGAAGCATATGTATT+CGG - chr7_2:72262301-72262320 Msa1074440:intron 20.0%
!!! TAATTTAATCTTGATGATTG+GGG - chr7_2:72262636-72262655 Msa1074440:intron 20.0%
!!! TTTATTTATTTTTTGAGGGA+AGG + chr7_2:72262851-72262870 None:intergenic 20.0%
!! CTTATATCAAATGATGAATA+AGG + chr7_2:72262882-72262901 None:intergenic 20.0%
!! ATTTATGTATATAACAAGTG+AGG + chr7_2:72262930-72262949 None:intergenic 20.0%
!! ATGATGCAAAAGAAAAAAAT+GGG + chr7_2:72263054-72263073 None:intergenic 20.0%
!! TATGATGCAAAAGAAAAAAA+TGG + chr7_2:72263055-72263074 None:intergenic 20.0%
!!! ATTTTTTTCTTTTGCATCAT+AGG - chr7_2:72263054-72263073 Msa1074440:intron 20.0%
!! TTAGTTATAACTTTGCTAAA+AGG + chr7_2:72263273-72263292 None:intergenic 20.0%
!! TTTCTTGACACAAAAAAAAA+AGG - chr7_2:72263454-72263473 Msa1074440:intron 20.0%
!!! AAAGACGTATGAATTTTTTT+AGG - chr7_2:72263868-72263887 Msa1074440:intron 20.0%
!!! AAGACGTATGAATTTTTTTA+GGG - chr7_2:72263869-72263888 Msa1074440:intron 20.0%
!!! AACTTTTTTTATTGTATACC+TGG + chr7_2:72264009-72264028 None:intergenic 20.0%
!!! TTGATCAATGTCTTTTTTTT+TGG - chr7_2:72264033-72264052 Msa1074440:intron 20.0%
!! ATAAAACAAATTGATGCAAT+CGG - chr7_2:72264160-72264179 Msa1074440:intron 20.0%
!! CTAAAAAATGAATGGTTTAA+TGG + chr7_2:72264275-72264294 None:intergenic 20.0%
!! TTAATCACAGAAAAATAAGA+AGG - chr7_2:72264311-72264330 Msa1074440:intron 20.0%
!! CATTGTTTATGAATAATGAT+AGG + chr7_2:72264557-72264576 None:intergenic 20.0%
!!! TTTTTATTCTTCACATTTGA+GGG + chr7_2:72264777-72264796 None:intergenic 20.0%
!!! TTTTTTATTCTTCACATTTG+AGG + chr7_2:72264778-72264797 None:intergenic 20.0%
!! ATGTGAAGAATAAAAAATTG+TGG - chr7_2:72264781-72264800 Msa1074440:intron 20.0%
!! AAGAAATTAGTAAAACAACA+TGG - chr7_2:72264888-72264907 Msa1074440:intron 20.0%
!!! ACATATTTTCAATTCTTAGT+GGG + chr7_2:72265212-72265231 None:intergenic 20.0%
!! GCTAAATTGAAAATGTAAAT+GGG - chr7_2:72265383-72265402 Msa1074440:intron 20.0%
!!! TATTTGATTCTGGAATTAAA+AGG + chr7_2:72265517-72265536 None:intergenic 20.0%
!! ATAAAGCTAATATTTGATTC+TGG + chr7_2:72265527-72265546 None:intergenic 20.0%
!! GTACTCTTCAAAAAAAATTA+AGG - chr7_2:72265731-72265750 Msa1074440:intron 20.0%
!! CACAATTTAATCTAACAATA+TGG + chr7_2:72265817-72265836 None:intergenic 20.0%
!! TATTGTTAGATTAAATTGTG+TGG - chr7_2:72265817-72265836 Msa1074440:intron 20.0%
!!! AGGATTTTTTCAAAATGAAA+TGG - chr7_2:72266151-72266170 Msa1074440:intron 20.0%
!! TGATTATTTCATTTGAGAAA+TGG - chr7_2:72266219-72266238 Msa1074440:intron 20.0%
!! ATTTATTGAAATAAGCTAGT+AGG - chr7_2:72266548-72266567 Msa1074440:intron 20.0%
!! AATCACTTACATAAAATGTT+TGG + chr7_2:72266590-72266609 None:intergenic 20.0%
!! AATTATGCTCAATATAACTT+CGG + chr7_2:72266785-72266804 None:intergenic 20.0%
!!! CAATATTTTGCTATCAAATA+GGG + chr7_2:72267549-72267568 None:intergenic 20.0%
!!! ACAATATTTTGCTATCAAAT+AGG + chr7_2:72267550-72267569 None:intergenic 20.0%
! CTAATTAAATTATTAGAGCG+TGG - chr7_2:72256823-72256842 Msa1074440:three_prime_UTR 25.0%
!! TTCATTCTATTATTTTCTCC+GGG - chr7_2:72257219-72257238 Msa1074440:CDS 25.0%
!! TATTGATTATAGCAATAACC+CGG + chr7_2:72257240-72257259 None:intergenic 25.0%
! TAGAATTTCGTCATATTTGA+GGG - chr7_2:72257357-72257376 Msa1074440:CDS 25.0%
! ACACTCATATATTCAATGTA+GGG + chr7_2:72257418-72257437 None:intergenic 25.0%
! TACACTCATATATTCAATGT+AGG + chr7_2:72257419-72257438 None:intergenic 25.0%
! TACATTGAATATATGAGTGT+AGG - chr7_2:72257418-72257437 Msa1074440:CDS 25.0%
!! CATCTTCATCCAAAATTTTA+AGG + chr7_2:72257482-72257501 None:intergenic 25.0%
! AGTTAAAATTCCACAATGTA+TGG - chr7_2:72257697-72257716 Msa1074440:intron 25.0%
! TCTTAAGACAACATGTATAA+CGG + chr7_2:72257758-72257777 None:intergenic 25.0%
! ATTATGATACAACTCAATGT+AGG - chr7_2:72257832-72257851 Msa1074440:intron 25.0%
!! ATGGTAATAATTCCCTTTTA+TGG + chr7_2:72257995-72258014 None:intergenic 25.0%
! AAGGGAATTATTACCATAAA+AGG - chr7_2:72257998-72258017 Msa1074440:intron 25.0%
!! TCAAAAGCAATTTCCTTTTA+TGG + chr7_2:72258014-72258033 None:intergenic 25.0%
!!! ATGTCTTCACTTTTAGTTTT+TGG - chr7_2:72258166-72258185 Msa1074440:intron 25.0%
!! GTGTATTTTGTCAACTTAAT+AGG + chr7_2:72258224-72258243 None:intergenic 25.0%
!!! TGGATTTAATTTGTTGAAGT+TGG + chr7_2:72258323-72258342 None:intergenic 25.0%
! TGAAAAGGGTAAAAAACATT+AGG + chr7_2:72258402-72258421 None:intergenic 25.0%
! CACAACATGCTAAAAAATAT+GGG + chr7_2:72258534-72258553 None:intergenic 25.0%
! ACACAACATGCTAAAAAATA+TGG + chr7_2:72258535-72258554 None:intergenic 25.0%
!!! TGTGGGTTTAACTTTTATAT+TGG - chr7_2:72258634-72258653 Msa1074440:intron 25.0%
!! TACATAATATCTGAAGGTTT+TGG - chr7_2:72258702-72258721 Msa1074440:intron 25.0%
!! ACATAATATCTGAAGGTTTT+GGG - chr7_2:72258703-72258722 Msa1074440:intron 25.0%
!!! ATACCATCTTTTTTTGTCTT+TGG - chr7_2:72258942-72258961 Msa1074440:intron 25.0%
!!! TACCATCTTTTTTTGTCTTT+GGG - chr7_2:72258943-72258962 Msa1074440:intron 25.0%
! GCAAGTTACTGATAATTTAA+TGG + chr7_2:72259099-72259118 None:intergenic 25.0%
!! GTTTTATCCATGAAGTTATA+AGG + chr7_2:72259886-72259905 None:intergenic 25.0%
!!! TTGGTTTGTATCATTGTATT+AGG + chr7_2:72260290-72260309 None:intergenic 25.0%
! ACAATGATACAAACCAATAT+AGG - chr7_2:72260293-72260312 Msa1074440:intron 25.0%
!! ATTTTCAATGGATCCTATAT+TGG + chr7_2:72260309-72260328 None:intergenic 25.0%
!! CATAATGTTGGAATTTTCAA+TGG + chr7_2:72260321-72260340 None:intergenic 25.0%
!!! ACATTCACGCAATTTTATTT+TGG - chr7_2:72260419-72260438 Msa1074440:intron 25.0%
! TTTGTCAATTTGACCTAATT+TGG - chr7_2:72260765-72260784 Msa1074440:intron 25.0%
! AACTCTATATGTCTATGATA+TGG + chr7_2:72260799-72260818 None:intergenic 25.0%
! ATCAAAAACCTTAAGACATT+AGG + chr7_2:72260930-72260949 None:intergenic 25.0%
! AAACATTTCATCATAACGTT+TGG + chr7_2:72261035-72261054 None:intergenic 25.0%
! TATTTCAACTTCCTTTACTT+TGG - chr7_2:72261127-72261146 Msa1074440:intron 25.0%
! AAATCATGGTGATAATTTCA+TGG - chr7_2:72261241-72261260 Msa1074440:intron 25.0%
! AATCATGGTGATAATTTCAT+GGG - chr7_2:72261242-72261261 Msa1074440:intron 25.0%
! AATAAACGAAAGAATGGTTA+AGG - chr7_2:72261341-72261360 Msa1074440:intron 25.0%
! GTTAAGGTTTCAAATTTGAA+AGG - chr7_2:72261357-72261376 Msa1074440:intron 25.0%
! TCAAATTTGAAAGGAAAGAA+AGG - chr7_2:72261366-72261385 Msa1074440:intron 25.0%
!!! TACAATAATGGATGGTTAAT+TGG - chr7_2:72261466-72261485 Msa1074440:intron 25.0%
!! AGAATTTTGAATTGAACGAA+TGG - chr7_2:72261550-72261569 Msa1074440:intron 25.0%
! ACCCAAAATTTGATGTAATT+TGG - chr7_2:72261654-72261673 Msa1074440:intron 25.0%
!! CACCAAATTACATCAAATTT+TGG + chr7_2:72261659-72261678 None:intergenic 25.0%
! CAAAATTTGATGTAATTTGG+TGG - chr7_2:72261657-72261676 Msa1074440:intron 25.0%
! ATAGTTTAGAAGTTACATCA+CGG + chr7_2:72261778-72261797 None:intergenic 25.0%
! AACTTCTAAACTATTATCTC+TGG - chr7_2:72261784-72261803 Msa1074440:intron 25.0%
! AAATGAATTACATGTTAACC+CGG + chr7_2:72261837-72261856 None:intergenic 25.0%
!!! TTTAACCTTTTGGTTTATAG+TGG - chr7_2:72262001-72262020 Msa1074440:intron 25.0%
!! AATTTGAAGCATATGTATTC+GGG - chr7_2:72262302-72262321 Msa1074440:intron 25.0%
! AACACTTAAATTCTTCACTA+TGG - chr7_2:72262350-72262369 Msa1074440:intron 25.0%
! ACACTTAAATTCTTCACTAT+GGG - chr7_2:72262351-72262370 Msa1074440:intron 25.0%
! AAATTTAAATTCTCCGATGT+GGG + chr7_2:72262477-72262496 None:intergenic 25.0%
! TTAAGCATTTGACATATTTG+AGG - chr7_2:72262565-72262584 Msa1074440:intron 25.0%
! CCAATATATCTAGATTATGT+TGG + chr7_2:72262600-72262619 None:intergenic 25.0%
! CCAACATAATCTAGATATAT+TGG - chr7_2:72262597-72262616 Msa1074440:intron 25.0%
! TAGATTTAACAGCTGATATT+TGG - chr7_2:72262785-72262804 Msa1074440:intron 25.0%
!! GTTCAAGTTACACTTATATT+GGG - chr7_2:72262807-72262826 Msa1074440:intron 25.0%
!! TTCAAGTTACACTTATATTG+GGG - chr7_2:72262808-72262827 Msa1074440:intron 25.0%
! ATATCAAATGATGAATAAGG+AGG + chr7_2:72262879-72262898 None:intergenic 25.0%
! TGATGCAAAAGAAAAAAATG+GGG + chr7_2:72263053-72263072 None:intergenic 25.0%
! TTAATCCTATAAGAGAATCT+TGG + chr7_2:72263109-72263128 None:intergenic 25.0%
!! ACACCAACTAATTTTTATGA+AGG - chr7_2:72263245-72263264 Msa1074440:intron 25.0%
! GCAAAGTTATAACTAAAAAG+TGG - chr7_2:72263277-72263296 Msa1074440:intron 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + chr7_2:72263636-72263655 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - chr7_2:72263635-72263654 Msa1074440:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - chr7_2:72263648-72263667 Msa1074440:intron 25.0%
! AAATTGAGGATCTAAACAAT+AGG + chr7_2:72263806-72263825 None:intergenic 25.0%
!!! AGACGTATGAATTTTTTTAG+GGG - chr7_2:72263870-72263889 Msa1074440:intron 25.0%
!!! TTTTTTTATTGTATACCTGG+AGG + chr7_2:72264006-72264025 None:intergenic 25.0%
! GACATTTGTCAAATAATCAT+TGG - chr7_2:72264204-72264223 Msa1074440:intron 25.0%
! TAGTGTGACTAAAAAATGAA+TGG + chr7_2:72264283-72264302 None:intergenic 25.0%
!!! TTTTTTATTGCTTTTTCGCA+TGG - chr7_2:72264518-72264537 Msa1074440:intron 25.0%
! AAGAATAAAAAATTGTGGAG+AGG - chr7_2:72264786-72264805 Msa1074440:intron 25.0%
! GTTTATTCAAACTTCTTCAT+GGG + chr7_2:72264983-72265002 None:intergenic 25.0%
! TGTTTATTCAAACTTCTTCA+TGG + chr7_2:72264984-72265003 None:intergenic 25.0%
!! CACATATTTTCAATTCTTAG+TGG + chr7_2:72265213-72265232 None:intergenic 25.0%
! CGCTAAATTGAAAATGTAAA+TGG - chr7_2:72265382-72265401 Msa1074440:intron 25.0%
!!! ATATGGATAAAAGCATCAAT+AGG + chr7_2:72265464-72265483 None:intergenic 25.0%
! CAAATTAATAAGGATTGACT+TGG - chr7_2:72265598-72265617 Msa1074440:intron 25.0%
! TCTAACAATATGGACATTAT+CGG + chr7_2:72265807-72265826 None:intergenic 25.0%
! GCTGGATTGTATATATATAT+TGG - chr7_2:72266100-72266119 Msa1074440:intron 25.0%
! GTTTCACAAAACTATAGTAA+TGG + chr7_2:72266183-72266202 None:intergenic 25.0%
! ACATAAAGTAAATCATTTGC+TGG - chr7_2:72266261-72266280 Msa1074440:intron 25.0%
!! TATCATCTATATAGAGTGTT+TGG - chr7_2:72266389-72266408 Msa1074440:intron 25.0%
!!! AAACTTGTTTCCAACTTTTT+GGG + chr7_2:72267086-72267105 None:intergenic 25.0%
!!! AAAACTTGTTTCCAACTTTT+TGG + chr7_2:72267087-72267106 None:intergenic 25.0%
!! GTTTTTCATTTATGAGTCTT+TGG - chr7_2:72267102-72267121 Msa1074440:intron 25.0%
AATTATTAGAGCGTGGAATT+AGG - chr7_2:72256830-72256849 Msa1074440:three_prime_UTR 30.0%
ATTATTAGAGCGTGGAATTA+GGG - chr7_2:72256831-72256850 Msa1074440:three_prime_UTR 30.0%
CTAGAATTTCGTCATATTTG+AGG - chr7_2:72257356-72257375 Msa1074440:CDS 30.0%
ATAACCCAGTTAAACATTGT+GGG - chr7_2:72257591-72257610 Msa1074440:CDS 30.0%
ATATACTGTTCCATACATTG+TGG + chr7_2:72257710-72257729 None:intergenic 30.0%
TACATGTTGTCTTAAGACTT+TGG - chr7_2:72257761-72257780 Msa1074440:intron 30.0%
ACATGTTGTCTTAAGACTTT+GGG - chr7_2:72257762-72257781 Msa1074440:intron 30.0%
AACCAAATGATCATAATGTC+AGG + chr7_2:72257871-72257890 None:intergenic 30.0%
AAAAAAAGGGAAATGCTAAC+CGG + chr7_2:72258125-72258144 None:intergenic 30.0%
!!! TCTTCACTTTTAGTTTTTGG+TGG - chr7_2:72258169-72258188 Msa1074440:intron 30.0%
! TAAAAAATATGGGCTGATGA+TGG + chr7_2:72258524-72258543 None:intergenic 30.0%
!!! ACCATCTTTTTTTGTCTTTG+GGG - chr7_2:72258944-72258963 Msa1074440:intron 30.0%
TAAAAAAGGTAGAATGATGG+TGG + chr7_2:72259266-72259285 None:intergenic 30.0%
TGGTAAAAAAGGTAGAATGA+TGG + chr7_2:72259269-72259288 None:intergenic 30.0%
AAGACACACATTGGTAAAAA+AGG + chr7_2:72259280-72259299 None:intergenic 30.0%
AAGAGTCTTACACTTAAAAG+AGG - chr7_2:72259340-72259359 Msa1074440:intron 30.0%
! TGTTACTTAAAGTTTCGCAT+TGG - chr7_2:72259379-72259398 Msa1074440:intron 30.0%
TTGCTCTTAGAATAATGAGA+TGG - chr7_2:72259502-72259521 Msa1074440:intron 30.0%
!! CATAATGTTCATAGTTCTGA+CGG + chr7_2:72259546-72259565 None:intergenic 30.0%
! ATTCCTTCAAGTTTGATCTA+TGG - chr7_2:72259683-72259702 Msa1074440:intron 30.0%
! AATTTTATGGGTTCGTTGAA+GGG + chr7_2:72259844-72259863 None:intergenic 30.0%
! TAATTTTATGGGTTCGTTGA+AGG + chr7_2:72259845-72259864 None:intergenic 30.0%
ATCCATGAAGTTATAAGGAA+CGG + chr7_2:72259881-72259900 None:intergenic 30.0%
TCTTTCATGAGAAGAGATAA+AGG + chr7_2:72259992-72260011 None:intergenic 30.0%
ACATGATCAAAAAGTTGGAT+TGG + chr7_2:72260048-72260067 None:intergenic 30.0%
TTATCTGACACAACCAAATT+AGG + chr7_2:72260086-72260105 None:intergenic 30.0%
TTTGGTTGTGTCAGATAATT+AGG - chr7_2:72260088-72260107 Msa1074440:intron 30.0%
TTGGTTGTGTCAGATAATTA+GGG - chr7_2:72260089-72260108 Msa1074440:intron 30.0%
ACATAAAGTTGCATACTTGA+GGG - chr7_2:72260114-72260133 Msa1074440:intron 30.0%
AGTTAAATTTCTGCAATGGA+TGG - chr7_2:72260161-72260180 Msa1074440:intron 30.0%
! TCATATTCGTTCATCACTTT+TGG - chr7_2:72260476-72260495 Msa1074440:intron 30.0%
!! TATGAGTTTGTTGAAAGAGT+TGG + chr7_2:72260588-72260607 None:intergenic 30.0%
TATGGTGAAATAGCCAAATT+AGG + chr7_2:72260781-72260800 None:intergenic 30.0%
ATATAGAGTTTCACACTCAA+GGG - chr7_2:72260809-72260828 Msa1074440:intron 30.0%
AAATCTCTCCTAATGTCTTA+AGG - chr7_2:72260919-72260938 Msa1074440:intron 30.0%
!!! TTTTTTAGTGAGCCTACAAT+GGG + chr7_2:72261011-72261030 None:intergenic 30.0%
!!! ATTTTTTAGTGAGCCTACAA+TGG + chr7_2:72261012-72261031 None:intergenic 30.0%
CATTAGCATTGTTCCATATA+TGG + chr7_2:72261169-72261188 None:intergenic 30.0%
AGTGCAAATAAACGAAAGAA+TGG - chr7_2:72261335-72261354 Msa1074440:intron 30.0%
TCATAGCAATGACAATCATA+TGG + chr7_2:72261439-72261458 None:intergenic 30.0%
TGAACGAATGGATATCAAAA+TGG - chr7_2:72261562-72261581 Msa1074440:intron 30.0%
!!! TCAACACCCTTTTTTATGTT+TGG - chr7_2:72261720-72261739 Msa1074440:intron 30.0%
!!! CAACACCCTTTTTTATGTTT+GGG - chr7_2:72261721-72261740 Msa1074440:intron 30.0%
CAACACCCAAACATAAAAAA+GGG + chr7_2:72261729-72261748 None:intergenic 30.0%
TAGTTTAGAAGTTACATCAC+GGG + chr7_2:72261777-72261796 None:intergenic 30.0%
ACATTCCACTATAAACCAAA+AGG + chr7_2:72262009-72262028 None:intergenic 30.0%
ATGTATGAGTGAACAAATCT+TGG - chr7_2:72262025-72262044 Msa1074440:intron 30.0%
! TGTAGTCTTTGAGAATTGAA+GGG - chr7_2:72262063-72262082 Msa1074440:intron 30.0%
GTCAAATCTTATGCATCAAA+TGG - chr7_2:72262219-72262238 Msa1074440:intron 30.0%
TTGTAAAACTATGAAAGAGG+AGG + chr7_2:72262332-72262351 None:intergenic 30.0%
GTGTTGTAAAACTATGAAAG+AGG + chr7_2:72262335-72262354 None:intergenic 30.0%
CACTTAAATTCTTCACTATG+GGG - chr7_2:72262352-72262371 Msa1074440:intron 30.0%
AATTTAAATTCTCCGATGTG+GGG + chr7_2:72262476-72262495 None:intergenic 30.0%
GAAATTTAAATTCTCCGATG+TGG + chr7_2:72262478-72262497 None:intergenic 30.0%
! TTGAAATGAATTTTGTCACG+TGG + chr7_2:72262527-72262546 None:intergenic 30.0%
TATAAAGCTTAGTCATCTTG+AGG - chr7_2:72262714-72262733 Msa1074440:intron 30.0%
TTAGTCATCTTGAGGATAAA+GGG - chr7_2:72262722-72262741 Msa1074440:intron 30.0%
GTTAAATCTAACGCATCAAA+TGG + chr7_2:72262775-72262794 None:intergenic 30.0%
! GGTTCAAGTTACACTTATAT+TGG - chr7_2:72262806-72262825 Msa1074440:intron 30.0%
!!! TTTATTTTTTGAGGGAAGGT+TGG + chr7_2:72262847-72262866 None:intergenic 30.0%
!! AGTGAGGTATTGATGAAAAT+TGG + chr7_2:72262914-72262933 None:intergenic 30.0%
AAAAAATGGGGTTAAGACAA+TGG + chr7_2:72263041-72263060 None:intergenic 30.0%
AAACTCCAAGATTCTCTTAT+AGG - chr7_2:72263101-72263120 Msa1074440:intron 30.0%
! CTAGAAGACACATTTTATGA+AGG - chr7_2:72263183-72263202 Msa1074440:intron 30.0%
GCACCTTCATAAAAATTAGT+TGG + chr7_2:72263251-72263270 None:intergenic 30.0%
!!! GTTTTGGAGTCATTAACAAA+AGG - chr7_2:72263424-72263443 Msa1074440:intron 30.0%
AAAACAAGGTTGTCATCAAA+TGG + chr7_2:72263622-72263641 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr7_2:72263661-72263680 Msa1074440:intron 30.0%
!!! AACCACTTTTTGACAACTTT+TGG + chr7_2:72263733-72263752 None:intergenic 30.0%
TTGTTTAGATCCTCAATTTG+TGG - chr7_2:72263807-72263826 Msa1074440:intron 30.0%
! TATAGCAAAAAGCGTAAGAT+TGG + chr7_2:72263924-72263943 None:intergenic 30.0%
TTGCTATATGCATATATGTG+TGG - chr7_2:72263936-72263955 Msa1074440:intron 30.0%
TGCTATATGCATATATGTGT+GGG - chr7_2:72263937-72263956 Msa1074440:intron 30.0%
GTAACAAAATGTGCTTCTAA+TGG - chr7_2:72264728-72264747 Msa1074440:intron 30.0%
GTAAATTATGGAACATGAAG+TGG + chr7_2:72264821-72264840 None:intergenic 30.0%
CTTCATGTTCCATAATTTAC+AGG - chr7_2:72264821-72264840 Msa1074440:intron 30.0%
CTAGCAATACCTGTAAATTA+TGG + chr7_2:72264833-72264852 None:intergenic 30.0%
ATTCAAATTGACAATGAGTG+AGG - chr7_2:72265287-72265306 Msa1074440:intron 30.0%
GTGACTCATATTGAATCATA+TGG + chr7_2:72265481-72265500 None:intergenic 30.0%
! GTGTACACATTTTTATGACA+TGG - chr7_2:72265668-72265687 Msa1074440:intron 30.0%
!! CAATGCTCTTTAGAATTTGA+AGG - chr7_2:72265700-72265719 Msa1074440:intron 30.0%
! ATTATCGGTTGAACTAACTA+AGG + chr7_2:72265792-72265811 None:intergenic 30.0%
! CGTTTAAGTGTTTGACTTAT+AGG - chr7_2:72265901-72265920 Msa1074440:intron 30.0%
! TTAAGTGTTTGACTTATAGG+AGG - chr7_2:72265904-72265923 Msa1074440:intron 30.0%
!!! TGTTAGTTTTTCCTGTTGTT+AGG + chr7_2:72265995-72266014 None:intergenic 30.0%
! ATAGAATTGACTTTGAAAGC+TGG - chr7_2:72266082-72266101 Msa1074440:intron 30.0%
CTTCACTGAAGTTTCTATTA+AGG - chr7_2:72266325-72266344 Msa1074440:intron 30.0%
GTAACTTAATTACGTGCTTA+CGG - chr7_2:72266416-72266435 Msa1074440:intron 30.0%
AGTTGCTTAGTTGAAAACAA+GGG + chr7_2:72266706-72266725 None:intergenic 30.0%
AACAATATACCTGCAAAAGA+TGG + chr7_2:72266755-72266774 None:intergenic 30.0%
! TCTTTTGCAGGTATATTGTT+TGG - chr7_2:72266755-72266774 Msa1074440:intron 30.0%
! CTTTTGCAGGTATATTGTTT+GGG - chr7_2:72266756-72266775 Msa1074440:intron 30.0%
! TTTTGCAGGTATATTGTTTG+GGG - chr7_2:72266757-72266776 Msa1074440:intron 30.0%
ACAAAGTGGACATATAACAA+CGG + chr7_2:72266835-72266854 None:intergenic 30.0%
!!! GTGGCTTTTTCATAATTTGA+TGG + chr7_2:72266933-72266952 None:intergenic 30.0%
GATTGTGTTTGAGAATACTA+AGG + chr7_2:72266994-72267013 None:intergenic 30.0%
!! AGTCTTTGGAATATGAGTAA+TGG - chr7_2:72267116-72267135 Msa1074440:intron 30.0%
TGGTACTAGTAATAATCAAC+TGG - chr7_2:72267247-72267266 Msa1074440:intron 30.0%
ATGCGAAAAAAGTTCATCAA+AGG - chr7_2:72267324-72267343 Msa1074440:CDS 30.0%
AAAAAAGTTCATCAAAGGAG+TGG - chr7_2:72267329-72267348 Msa1074440:CDS 30.0%
AATGAATAGCACTTTCTTGA+TGG - chr7_2:72267496-72267515 Msa1074440:CDS 30.0%
GCTCGCAAATAACAAAAAAT+AGG + chr7_2:72267631-72267650 None:intergenic 30.0%
TTCATACATACACCGATATA+CGG - chr7_2:72267657-72267676 Msa1074440:five_prime_UTR 30.0%
AGAAGAATCAATCCGTATAT+CGG + chr7_2:72267672-72267691 None:intergenic 30.0%
ATTCTACTACTCGTTGTCTT+TGG - chr7_2:72256751-72256770 Msa1074440:three_prime_UTR 35.0%
TTGTGAATTACGCGGATATA+GGG + chr7_2:72256916-72256935 None:intergenic 35.0%
ATTGTGAATTACGCGGATAT+AGG + chr7_2:72256917-72256936 None:intergenic 35.0%
AGGATTTCGTTTCTTCTCTT+CGG - chr7_2:72257000-72257019 Msa1074440:CDS 35.0%
TGTAGGTCGAACAACAAATA+AGG - chr7_2:72257435-72257454 Msa1074440:CDS 35.0%
GTAGGTCGAACAACAAATAA+GGG - chr7_2:72257436-72257455 Msa1074440:CDS 35.0%
! ATACCATTGTTGGGTCTTTT+GGG + chr7_2:72257570-72257589 None:intergenic 35.0%
TGGGTTATGATACCATTGTT+GGG + chr7_2:72257579-72257598 None:intergenic 35.0%
CATAACCCAGTTAAACATTG+TGG - chr7_2:72257590-72257609 Msa1074440:CDS 35.0%
TAACCCAGTTAAACATTGTG+GGG - chr7_2:72257592-72257611 Msa1074440:CDS 35.0%
TGATATCAATCTCACTTGTG+TGG - chr7_2:72257793-72257812 Msa1074440:intron 35.0%
CATAATGTCAGGACTTATGT+GGG + chr7_2:72257860-72257879 None:intergenic 35.0%
TCATAATGTCAGGACTTATG+TGG + chr7_2:72257861-72257880 None:intergenic 35.0%
GTCCTGACATTATGATCATT+TGG - chr7_2:72257866-72257885 Msa1074440:intron 35.0%
CGCAAAAAAATGCATGAAAG+CGG + chr7_2:72257931-72257950 None:intergenic 35.0%
!!! CGCTTTCATGCATTTTTTTG+CGG - chr7_2:72257929-72257948 Msa1074440:intron 35.0%
!!! GCTTTCATGCATTTTTTTGC+GGG - chr7_2:72257930-72257949 Msa1074440:intron 35.0%
! CCTTTTATGGTATGCTTAAC+CGG + chr7_2:72257982-72258001 None:intergenic 35.0%
CGGTTAAGCATACCATAAAA+GGG - chr7_2:72257980-72257999 Msa1074440:intron 35.0%
CCTGGTTAAGGATATGAAAA+AGG + chr7_2:72258089-72258108 None:intergenic 35.0%
!! CCTTTTTCATATCCTTAACC+AGG - chr7_2:72258086-72258105 Msa1074440:intron 35.0%
TGTTGAAGTTGGAGATTTCA+GGG + chr7_2:72258312-72258331 None:intergenic 35.0%
TTGTTGAAGTTGGAGATTTC+AGG + chr7_2:72258313-72258332 None:intergenic 35.0%
! GTGAGTTGCTGGTAATTTTA+TGG + chr7_2:72258343-72258362 None:intergenic 35.0%
AGATGTTAATGTGTCATGTG+TGG - chr7_2:72258616-72258635 Msa1074440:intron 35.0%
GATGTTAATGTGTCATGTGT+GGG - chr7_2:72258617-72258636 Msa1074440:intron 35.0%
ATCATGACGTTCAAAGTTCT+GGG + chr7_2:72258803-72258822 None:intergenic 35.0%
TCCCCAAAGACAAAAAAAGA+TGG + chr7_2:72258948-72258967 None:intergenic 35.0%
!! TTTTTGTCTTTGGGGAGATT+TGG - chr7_2:72258952-72258971 Msa1074440:intron 35.0%
! ACATTTTCCAATACTTCCAC+AGG - chr7_2:72259126-72259145 Msa1074440:intron 35.0%
!! TGTTTTACCTGTGGAAGTAT+TGG + chr7_2:72259136-72259155 None:intergenic 35.0%
! AATAGTGTGTGTTTTACCTG+TGG + chr7_2:72259145-72259164 None:intergenic 35.0%
GACTCTTTGTGTATTTGATC+AGG + chr7_2:72259327-72259346 None:intergenic 35.0%
TGATGTGATTTCAATGTCAC+TGG - chr7_2:72259474-72259493 Msa1074440:intron 35.0%
! CTTCAAGTTTGATCTATGGT+GGG - chr7_2:72259687-72259706 Msa1074440:intron 35.0%
! ATTTTATGGGTTCGTTGAAG+GGG + chr7_2:72259843-72259862 None:intergenic 35.0%
!! TTGGATTGGTGGTAATTTAG+TGG + chr7_2:72260034-72260053 None:intergenic 35.0%
! TGATCAAAAAGTTGGATTGG+TGG + chr7_2:72260045-72260064 None:intergenic 35.0%
GCACAACATGATCAAAAAGT+TGG + chr7_2:72260053-72260072 None:intergenic 35.0%
AACCAAATTAGGTCAAGTAG+AGG + chr7_2:72260075-72260094 None:intergenic 35.0%
CACATAAAGTTGCATACTTG+AGG - chr7_2:72260113-72260132 Msa1074440:intron 35.0%
ACGTGCTAATTAGACATTAC+TGG - chr7_2:72260555-72260574 Msa1074440:intron 35.0%
!! GTTGATGACAGTTTCATAGA+GGG + chr7_2:72260733-72260752 None:intergenic 35.0%
CATATAGAGTTTCACACTCA+AGG - chr7_2:72260808-72260827 Msa1074440:intron 35.0%
TGTCAGTTAAACTTCTACGT+TGG - chr7_2:72260856-72260875 Msa1074440:intron 35.0%
TCTGTTGTCAATATCACTTG+TGG - chr7_2:72260955-72260974 Msa1074440:intron 35.0%
CTGTTGTCAATATCACTTGT+GGG - chr7_2:72260956-72260975 Msa1074440:intron 35.0%
TGTTGTCAATATCACTTGTG+GGG - chr7_2:72260957-72260976 Msa1074440:intron 35.0%
GTAATAATCCATCCCATTGT+AGG - chr7_2:72260996-72261015 Msa1074440:intron 35.0%
! TTCCTTTACTTTGGTCTTTG+CGG - chr7_2:72261136-72261155 Msa1074440:intron 35.0%
! TGATGTAATTTGGTGGTTCA+AGG - chr7_2:72261664-72261683 Msa1074440:intron 35.0%
CCAACACCCAAACATAAAAA+AGG + chr7_2:72261730-72261749 None:intergenic 35.0%
!!! CCTTTTTTATGTTTGGGTGT+TGG - chr7_2:72261727-72261746 Msa1074440:intron 35.0%
AACACTATTTCCCTAACACA+AGG + chr7_2:72261814-72261833 None:intergenic 35.0%
! GTGTAGTCTTTGAGAATTGA+AGG - chr7_2:72262062-72262081 Msa1074440:intron 35.0%
AAGATTTGACGACTGAGATT+TGG + chr7_2:72262209-72262228 None:intergenic 35.0%
TGTAAGTCTGGGTAGTTAAT+AGG + chr7_2:72262382-72262401 None:intergenic 35.0%
TGCTTTCAGTTTGTAAGTCT+GGG + chr7_2:72262393-72262412 None:intergenic 35.0%
TTGCTTTCAGTTTGTAAGTC+TGG + chr7_2:72262394-72262413 None:intergenic 35.0%
CTTAGTCATCTTGAGGATAA+AGG - chr7_2:72262721-72262740 Msa1074440:intron 35.0%
CAAATGATGAATAAGGAGGT+AGG + chr7_2:72262875-72262894 None:intergenic 35.0%
CTAAAAGACACCTTCATAGT+TGG - chr7_2:72263325-72263344 Msa1074440:intron 35.0%
TCTTTGACTGAATGTCGAAT+TGG - chr7_2:72263541-72263560 Msa1074440:intron 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG - chr7_2:72263728-72263747 Msa1074440:intron 35.0%
TAAATCAGTGCCACAAATTG+AGG + chr7_2:72263820-72263839 None:intergenic 35.0%
! CAAAAAGCGTAAGATTGGAA+TGG + chr7_2:72263919-72263938 None:intergenic 35.0%
ACAAATTGATGCAATCGGAT+TGG - chr7_2:72264165-72264184 Msa1074440:intron 35.0%
!! TAGAAGCACATTTTGTTACG+TGG + chr7_2:72264727-72264746 None:intergenic 35.0%
! TGATGATGACAAAGCAAAGT+TGG + chr7_2:72264919-72264938 None:intergenic 35.0%
AAAATGTAAATGGGCATGTC+TGG - chr7_2:72265392-72265411 Msa1074440:intron 35.0%
TTACTTGTCACATGCTTCAT+AGG - chr7_2:72265646-72265665 Msa1074440:intron 35.0%
! TGTTTGACTTATAGGAGGTT+GGG - chr7_2:72265909-72265928 Msa1074440:intron 35.0%
TTGCTGGAAATAATGAACTG+AGG - chr7_2:72266277-72266296 Msa1074440:intron 35.0%
AAGGTGAATGCTTAATGCAA+AGG - chr7_2:72266344-72266363 Msa1074440:intron 35.0%
!!! ATTTTGACTTCTCCAGTTCT+TGG - chr7_2:72266646-72266665 Msa1074440:intron 35.0%
!!! TTTTGACTTCTCCAGTTCTT+GGG - chr7_2:72266647-72266666 Msa1074440:intron 35.0%
TTGGAAATATGTAGCTGTGA+TGG - chr7_2:72266672-72266691 Msa1074440:intron 35.0%
GAGTTGCTTAGTTGAAAACA+AGG + chr7_2:72266707-72266726 None:intergenic 35.0%
AACTAAGCAACTCTTTGTGT+AGG - chr7_2:72266714-72266733 Msa1074440:intron 35.0%
ATATGTCCACTTTGTGCTAA+AGG - chr7_2:72266840-72266859 Msa1074440:intron 35.0%
TATGTCCACTTTGTGCTAAA+GGG - chr7_2:72266841-72266860 Msa1074440:intron 35.0%
!!! AGGACACTTTTTCTTCTTTG+TGG + chr7_2:72266952-72266971 None:intergenic 35.0%
TCTCAAACACAATCAAGTGT+AGG - chr7_2:72267000-72267019 Msa1074440:intron 35.0%
CTCAAACACAATCAAGTGTA+GGG - chr7_2:72267001-72267020 Msa1074440:intron 35.0%
GACGTGGTTGAAGTTAAATT+GGG + chr7_2:72267158-72267177 None:intergenic 35.0%
TGACGTGGTTGAAGTTAAAT+TGG + chr7_2:72267159-72267178 None:intergenic 35.0%
ATTTAGAAGCCAAGTCAAGA+AGG + chr7_2:72267199-72267218 None:intergenic 35.0%
ACTTGGCTTCTAAATTGAGT+GGG - chr7_2:72267204-72267223 Msa1074440:intron 35.0%
GAAAACTTAGCATCACATAG+TGG + chr7_2:72267281-72267300 None:intergenic 35.0%
! ATGTGATGCTAAGTTTTCCT+CGG - chr7_2:72267283-72267302 Msa1074440:CDS 35.0%
AGAAAACCTTTACTGCACTT+GGG + chr7_2:72267398-72267417 None:intergenic 35.0%
GTTGTTCTTGAGAATTGTTG+TGG - chr7_2:72267462-72267481 Msa1074440:CDS 35.0%
TCGGTGTATGTATGAATTGT+AGG + chr7_2:72267653-72267672 None:intergenic 35.0%
! CTTCTTTGTTGTAATGCTGT+TGG - chr7_2:72267687-72267706 Msa1074440:five_prime_UTR 35.0%
TACTCGTTGTCTTTGGCAAA+TGG - chr7_2:72256758-72256777 Msa1074440:three_prime_UTR 40.0%
CCAACCAGAAATCCAGAAAT+GGG + chr7_2:72256872-72256891 None:intergenic 40.0%
ACCAACCAGAAATCCAGAAA+TGG + chr7_2:72256873-72256892 None:intergenic 40.0%
!! TTTCTGGATTTCTGGTTGGT+TGG - chr7_2:72256873-72256892 Msa1074440:three_prime_UTR 40.0%
!! TTCTGGATTTCTGGTTGGTT+GGG - chr7_2:72256874-72256893 Msa1074440:three_prime_UTR 40.0%
GTGGAGAATTGTGAATTACG+CGG + chr7_2:72256924-72256943 None:intergenic 40.0%
!! TTTGAGCTTGGTTTGGATCA+TGG - chr7_2:72257023-72257042 Msa1074440:CDS 40.0%
!! TTGAGCTTGGTTTGGATCAT+GGG - chr7_2:72257024-72257043 Msa1074440:CDS 40.0%
TTGCAACGATCACAAGTGAA+GGG + chr7_2:72257117-72257136 None:intergenic 40.0%
ATTGCAACGATCACAAGTGA+AGG + chr7_2:72257118-72257137 None:intergenic 40.0%
! TCCAATGTGTTGATCTGCAT+CGG - chr7_2:72257534-72257553 Msa1074440:CDS 40.0%
! TACCATTGTTGGGTCTTTTG+GGG + chr7_2:72257569-72257588 None:intergenic 40.0%
! GATACCATTGTTGGGTCTTT+TGG + chr7_2:72257571-72257590 None:intergenic 40.0%
CTGGGTTATGATACCATTGT+TGG + chr7_2:72257580-72257599 None:intergenic 40.0%
AACCCAGTTAAACATTGTGG+GGG - chr7_2:72257593-72257612 Msa1074440:CDS 40.0%
TACCCCCACAATGTTTAACT+GGG + chr7_2:72257598-72257617 None:intergenic 40.0%
CCGGTTAAGCATACCATAAA+AGG - chr7_2:72257979-72257998 Msa1074440:intron 40.0%
!! GTTTTATCTGCGAGAGTATG+AGG + chr7_2:72258372-72258391 None:intergenic 40.0%
TACTTTCTCTCTTCTCGTGA+AGG - chr7_2:72258470-72258489 Msa1074440:intron 40.0%
TCATGACGTTCAAAGTTCTG+GGG + chr7_2:72258802-72258821 None:intergenic 40.0%
CATCATGACGTTCAAAGTTC+TGG + chr7_2:72258804-72258823 None:intergenic 40.0%
!! GAATGATGGTGGTTTCATAG+AGG + chr7_2:72259255-72259274 None:intergenic 40.0%
TCAGGTGACGTAGCAAAATA+AGG + chr7_2:72259309-72259328 None:intergenic 40.0%
TGATTTCAATGTCACTGGTG+TGG - chr7_2:72259479-72259498 Msa1074440:intron 40.0%
CCACCATAGATCAAACTTGA+AGG + chr7_2:72259689-72259708 None:intergenic 40.0%
! CCTTCAAGTTTGATCTATGG+TGG - chr7_2:72259686-72259705 Msa1074440:intron 40.0%
!!! TGAAGGGGTTGGTGATTTTT+GGG + chr7_2:72259828-72259847 None:intergenic 40.0%
!!! TTGAAGGGGTTGGTGATTTT+TGG + chr7_2:72259829-72259848 None:intergenic 40.0%
CTCCGTTCCTTATAACTTCA+TGG - chr7_2:72259876-72259895 Msa1074440:intron 40.0%
GGTGGTAATTTAGTGGAAAG+TGG + chr7_2:72260027-72260046 None:intergenic 40.0%
TGCCTCTACTTGACCTAATT+TGG - chr7_2:72260070-72260089 Msa1074440:intron 40.0%
!! CGTTCATCACTTTTGGTCTT+TGG - chr7_2:72260483-72260502 Msa1074440:intron 40.0%
!! TCATCACTTTTGGTCTTTGG+TGG - chr7_2:72260486-72260505 Msa1074440:intron 40.0%
!! CATCACTTTTGGTCTTTGGT+GGG - chr7_2:72260487-72260506 Msa1074440:intron 40.0%
!! GGTTGATGACAGTTTCATAG+AGG + chr7_2:72260734-72260753 None:intergenic 40.0%
! TCCTTTACTTTGGTCTTTGC+GGG - chr7_2:72261137-72261156 Msa1074440:intron 40.0%
GTGTTAGGGAAATAGTGTTC+CGG - chr7_2:72261815-72261834 Msa1074440:intron 40.0%
TGTTAGGGAAATAGTGTTCC+GGG - chr7_2:72261816-72261835 Msa1074440:intron 40.0%
AGAAGATTATCTCCCCACAT+CGG - chr7_2:72262461-72262480 Msa1074440:intron 40.0%
ACGTACAGTTTGACAGTTTG+TGG + chr7_2:72262671-72262690 None:intergenic 40.0%
GCTCATTGAACCTTCATCAT+GGG + chr7_2:72262753-72262772 None:intergenic 40.0%
! TTTTAGCAATCCACACCTCA+AGG + chr7_2:72263311-72263330 None:intergenic 40.0%
TTGCTAGAAGCCAACTATGA+AGG + chr7_2:72263338-72263357 None:intergenic 40.0%
GAGGCAGGAAATGTTTGATT+GGG + chr7_2:72263987-72264006 None:intergenic 40.0%
TTTATTGTATACCTGGAGGC+AGG + chr7_2:72264002-72264021 None:intergenic 40.0%
! GTGTTTGACTTATAGGAGGT+TGG - chr7_2:72265908-72265927 Msa1074440:intron 40.0%
AGTTCAACTAGTTCGAGCTA+AGG - chr7_2:72265933-72265952 Msa1074440:intron 40.0%
GTTCAACTAGTTCGAGCTAA+GGG - chr7_2:72265934-72265953 Msa1074440:intron 40.0%
AAGGGTTAAGAAGTTGGAGT+TGG - chr7_2:72265952-72265971 Msa1074440:intron 40.0%
AGTGTTCAAGTCCTAACAAC+AGG - chr7_2:72265981-72266000 Msa1074440:intron 40.0%
AAACCATGCAACAACCTTAC+TGG + chr7_2:72266370-72266389 None:intergenic 40.0%
AATAAGCTAGTAGGACCCTA+TGG - chr7_2:72266557-72266576 Msa1074440:intron 40.0%
! ATGTTTGGCTCATGTCCATA+GGG + chr7_2:72266575-72266594 None:intergenic 40.0%
! AATGTTTGGCTCATGTCCAT+AGG + chr7_2:72266576-72266595 None:intergenic 40.0%
! TTTGACTTCTCCAGTTCTTG+GGG - chr7_2:72266648-72266667 Msa1074440:intron 40.0%
TATTTCCAAACCCCAAGAAC+TGG + chr7_2:72266661-72266680 None:intergenic 40.0%
! ATATCAGCTCCATCTTTTGC+AGG - chr7_2:72266743-72266762 Msa1074440:intron 40.0%
! ACGGTGACATCTTGTTTGTT+GGG + chr7_2:72266816-72266835 None:intergenic 40.0%
! AACGGTGACATCTTGTTTGT+TGG + chr7_2:72266817-72266836 None:intergenic 40.0%
ATGTCCACTTTGTGCTAAAG+GGG - chr7_2:72266842-72266861 Msa1074440:intron 40.0%
! TTGGATCTTGGTCTGGAATT+AGG + chr7_2:72266872-72266891 None:intergenic 40.0%
ACCAAGATCCAAACACAGTT+TGG - chr7_2:72266880-72266899 Msa1074440:intron 40.0%
CCAAGATCCAAACACAGTTT+GGG - chr7_2:72266881-72266900 Msa1074440:intron 40.0%
! TTGACCATTGTTTGAAGCAC+AGG - chr7_2:72267033-72267052 Msa1074440:intron 40.0%
CAAACCTGTGCTTCAAACAA+TGG + chr7_2:72267040-72267059 None:intergenic 40.0%
! CATTGTTTGAAGCACAGGTT+TGG - chr7_2:72267038-72267057 Msa1074440:intron 40.0%
GACTTGGCTTCTAAATTGAG+TGG - chr7_2:72267203-72267222 Msa1074440:intron 40.0%
GCTTCTAAATTGAGTGGGAT+AGG - chr7_2:72267209-72267228 Msa1074440:intron 40.0%
AAAGTTCATCAAAGGAGTGG+CGG - chr7_2:72267332-72267351 Msa1074440:CDS 40.0%
GAAAACCTTTACTGCACTTG+GGG + chr7_2:72267397-72267416 None:intergenic 40.0%
CAGAAAACCTTTACTGCACT+TGG + chr7_2:72267399-72267418 None:intergenic 40.0%
! CAAGTGCAGTAAAGGTTTTC+TGG - chr7_2:72267397-72267416 Msa1074440:CDS 40.0%
ATTAGAGCGTGGAATTAGGG+AGG - chr7_2:72256834-72256853 Msa1074440:three_prime_UTR 45.0%
CCAGAAATCCAGAAATGGGA+GGG + chr7_2:72256868-72256887 None:intergenic 45.0%
ACCAGAAATCCAGAAATGGG+AGG + chr7_2:72256869-72256888 None:intergenic 45.0%
!! CCCATTTCTGGATTTCTGGT+TGG - chr7_2:72256869-72256888 Msa1074440:three_prime_UTR 45.0%
! TCTTCTCTTCGGTTTGAGCT+TGG - chr7_2:72257011-72257030 Msa1074440:CDS 45.0%
! TCTTCGGTTTGAGCTTGGTT+TGG - chr7_2:72257016-72257035 Msa1074440:CDS 45.0%
!! TGAGCTTGGTTTGGATCATG+GGG - chr7_2:72257025-72257044 Msa1074440:CDS 45.0%
TTGCCTAGATCTGGGAATTC+GGG + chr7_2:72257054-72257073 None:intergenic 45.0%
CTTGCCTAGATCTGGGAATT+CGG + chr7_2:72257055-72257074 None:intergenic 45.0%
AGCAATGCTTGCCTAGATCT+GGG + chr7_2:72257062-72257081 None:intergenic 45.0%
CACTTGTGATCGTTGCAATC+AGG - chr7_2:72257119-72257138 Msa1074440:CDS 45.0%
ACCGATGCAGATCAACACAT+TGG + chr7_2:72257538-72257557 None:intergenic 45.0%
! GTGTTGATCTGCATCGGTAT+TGG - chr7_2:72257540-72257559 Msa1074440:CDS 45.0%
! ACCATTGTTGGGTCTTTTGG+GGG + chr7_2:72257568-72257587 None:intergenic 45.0%
CTACCCCCACAATGTTTAAC+TGG + chr7_2:72257599-72257618 None:intergenic 45.0%
ACTGAGGGTTTGACGCTTAA+TGG - chr7_2:72257650-72257669 Msa1074440:intron 45.0%
TGAGGAATAGAGTGAGTTGC+TGG + chr7_2:72258354-72258373 None:intergenic 45.0%
TCTCTCTTCTCGTGAAGGAA+AGG - chr7_2:72258475-72258494 Msa1074440:intron 45.0%
!!! GAAGGTTTTGGGTGCAAATG+TGG - chr7_2:72258714-72258733 Msa1074440:intron 45.0%
TGGTGGCAATTTCAGTTGTC+AGG - chr7_2:72258734-72258753 Msa1074440:intron 45.0%
! CATGACGTTCAAAGTTCTGG+GGG + chr7_2:72258801-72258820 None:intergenic 45.0%
! TCTTTGGGGAGATTTGGCAA+TGG - chr7_2:72258958-72258977 Msa1074440:intron 45.0%
!! GGATTAGTTGAAGGAGCTTG+AGG + chr7_2:72259078-72259097 None:intergenic 45.0%
! GATGGTGGTTTCATAGAGGA+AGG + chr7_2:72259251-72259270 None:intergenic 45.0%
AGGTTAGCGAAGACACACAT+TGG + chr7_2:72259289-72259308 None:intergenic 45.0%
TTAGTGAGCCTACAATGGGA+TGG + chr7_2:72261007-72261026 None:intergenic 45.0%
! CCTTTACTTTGGTCTTTGCG+GGG - chr7_2:72261138-72261157 Msa1074440:intron 45.0%
TTGCGGGGTCAAACCATATA+TGG - chr7_2:72261153-72261172 Msa1074440:intron 45.0%
AAGGGATTTGCCCATGATGA+AGG - chr7_2:72262740-72262759 Msa1074440:intron 45.0%
GGCTCATTGAACCTTCATCA+TGG + chr7_2:72262754-72262773 None:intergenic 45.0%
AAAGTGGAAACCACACCTTG+AGG - chr7_2:72263293-72263312 Msa1074440:intron 45.0%
GGAGGCAGGAAATGTTTGAT+TGG + chr7_2:72263988-72264007 None:intergenic 45.0%
ATCAAACATTTCCTGCCTCC+AGG - chr7_2:72263988-72264007 Msa1074440:intron 45.0%
CGAGCTAAGGGTTAAGAAGT+TGG - chr7_2:72265946-72265965 Msa1074440:intron 45.0%
GGTTAAGAAGTTGGAGTTGG+AGG - chr7_2:72265955-72265974 Msa1074440:intron 45.0%
GCTTAATGCAAAGGCCAGTA+AGG - chr7_2:72266353-72266372 Msa1074440:intron 45.0%
ACTGTGTTTGGATCTTGGTC+TGG + chr7_2:72266879-72266898 None:intergenic 45.0%
CCCAAACTGTGTTTGGATCT+TGG + chr7_2:72266884-72266903 None:intergenic 45.0%
AATCAAGTGTAGGGACTGTG+AGG - chr7_2:72267010-72267029 Msa1074440:intron 45.0%
ATGTCCTGGACCCAAAAAGT+TGG - chr7_2:72267073-72267092 Msa1074440:intron 45.0%
!!! GTTTCCAACTTTTTGGGTCC+AGG + chr7_2:72267080-72267099 None:intergenic 45.0%
CTTCAACCACGTCATCTAAG+TGG - chr7_2:72267165-72267184 Msa1074440:intron 45.0%
TGAAGTCCACTTAGATGACG+TGG + chr7_2:72267174-72267193 None:intergenic 45.0%
GACTTCAAGCCTTCTTGACT+TGG - chr7_2:72267187-72267206 Msa1074440:intron 45.0%
CAACCAATATGGGGCAAAGA+AGG - chr7_2:72267355-72267374 Msa1074440:CDS 45.0%
ACACCTTCTTTGCCCCATAT+TGG + chr7_2:72267361-72267380 None:intergenic 45.0%
CATGCTCTACAAGGGAAACT+GGG + chr7_2:72267424-72267443 None:intergenic 45.0%
ACATGCTCTACAAGGGAAAC+TGG + chr7_2:72267425-72267444 None:intergenic 45.0%
CCTCTCAACATGCTCTACAA+GGG + chr7_2:72267432-72267451 None:intergenic 45.0%
CCTTGTAGAGCATGTTGAGA+GGG - chr7_2:72267430-72267449 Msa1074440:CDS 45.0%
!! AAAAAAAAAAAAAAAAATAG+TGG + chr7_2:72256943-72256962 None:intergenic 5.0%
!!! TTATCTTAAATTATTTATTT+TGG - chr7_2:72260387-72260406 Msa1074440:intron 5.0%
!!! TATATTTTATAAAGTTTTAT+AGG + chr7_2:72262245-72262264 None:intergenic 5.0%
!! TATATAAAAAAAAACAATTA+AGG + chr7_2:72262432-72262451 None:intergenic 5.0%
!! TATATTAAAAACAAAATTTA+AGG - chr7_2:72265572-72265591 Msa1074440:intron 5.0%
AGACGATTCCCTCCCATTTC+TGG - chr7_2:72256857-72256876 Msa1074440:three_prime_UTR 50.0%
! CCCTCCCATTTCTGGATTTC+TGG - chr7_2:72256865-72256884 Msa1074440:three_prime_UTR 50.0%
ACTCCCGAATTCCCAGATCT+AGG - chr7_2:72257048-72257067 Msa1074440:CDS 50.0%
GAGCAATGCTTGCCTAGATC+TGG + chr7_2:72257063-72257082 None:intergenic 50.0%
ACGAAATTCTAGCCCGTGCT+TGG + chr7_2:72257348-72257367 None:intergenic 50.0%
TCCCCCAAAAGACCCAACAA+TGG - chr7_2:72257564-72257583 Msa1074440:CDS 50.0%
GTAGTCGAAGTGGTTCTTGG+TGG - chr7_2:72257615-72257634 Msa1074440:CDS 50.0%
TGGCGAATCACAGACACTGA+GGG - chr7_2:72257635-72257654 Msa1074440:intron 50.0%
! TTTTTGCGGGTCCTGCTAAC+CGG - chr7_2:72257943-72257962 Msa1074440:intron 50.0%
ATATCCTTAACCAGGTGCCC+CGG - chr7_2:72258094-72258113 Msa1074440:intron 50.0%
!!! GGTTTTGGGTGCAAATGTGG+TGG - chr7_2:72258717-72258736 Msa1074440:intron 50.0%
!! GTTCTGGGGGAGCTTACAAT+GGG + chr7_2:72258788-72258807 None:intergenic 50.0%
!! AGTTCTGGGGGAGCTTACAA+TGG + chr7_2:72258789-72258808 None:intergenic 50.0%
GAGATGGTCCAACCCATTGT+AGG - chr7_2:72259518-72259537 Msa1074440:intron 50.0%
GTTCTGACGGAGCCTACAAT+GGG + chr7_2:72259533-72259552 None:intergenic 50.0%
! AGTTCTGACGGAGCCTACAA+TGG + chr7_2:72259534-72259553 None:intergenic 50.0%
TATGGGTTCGTTGAAGGGGT+TGG + chr7_2:72259839-72259858 None:intergenic 50.0%
CCCCGCAAAGACCAAAGTAA+AGG + chr7_2:72261141-72261160 None:intergenic 50.0%
TCTCTGGCACACCTTGTGTT+AGG - chr7_2:72261800-72261819 Msa1074440:intron 50.0%
CTCTGGCACACCTTGTGTTA+GGG - chr7_2:72261801-72261820 Msa1074440:intron 50.0%
AGGCCAGTAAGGTTGTTGCA+TGG - chr7_2:72266364-72266383 Msa1074440:intron 50.0%
CTTCTCCAGTTCTTGGGGTT+TGG - chr7_2:72266653-72266672 Msa1074440:intron 50.0%
CGAACCCCTTTAGCACAAAG+TGG + chr7_2:72266849-72266868 None:intergenic 50.0%
TGACGCTCCCAAACTGTGTT+TGG + chr7_2:72266891-72266910 None:intergenic 50.0%
!! AAGAAAAAGTGTCCTGCCCC+AGG - chr7_2:72266957-72266976 Msa1074440:intron 50.0%
TAAGGTCTCTCTGCATCCTG+GGG + chr7_2:72266976-72266995 None:intergenic 50.0%
CTAAGGTCTCTCTGCATCCT+GGG + chr7_2:72266977-72266996 None:intergenic 50.0%
ACTAAGGTCTCTCTGCATCC+TGG + chr7_2:72266978-72266997 None:intergenic 50.0%
GGACCTGATCACAAATGTCC+TGG - chr7_2:72267059-72267078 Msa1074440:intron 50.0%
GGTCCAGGACATTTGTGATC+AGG + chr7_2:72267065-72267084 None:intergenic 50.0%
CCCTTGTAGAGCATGTTGAG+AGG - chr7_2:72267429-72267448 Msa1074440:CDS 50.0%
CCCTCTCAACATGCTCTACA+AGG + chr7_2:72267433-72267452 None:intergenic 50.0%
GAGCATGTTGAGAGGGATCA+TGG - chr7_2:72267437-72267456 Msa1074440:CDS 50.0%
CATGTTGAGAGGGATCATGG+TGG - chr7_2:72267440-72267459 Msa1074440:CDS 50.0%
ATTCTAGCCCGTGCTTGGCA+CGG + chr7_2:72257343-72257362 None:intergenic 55.0%
CATTGTGGGGGTAGTCGAAG+TGG - chr7_2:72257605-72257624 Msa1074440:CDS 55.0%
GGGGTAGTCGAAGTGGTTCT+TGG - chr7_2:72257612-72257631 Msa1074440:CDS 55.0%
GTGGCGAATCACAGACACTG+AGG - chr7_2:72257634-72257653 Msa1074440:intron 55.0%
TATCCTTAACCAGGTGCCCC+GGG - chr7_2:72258095-72258114 Msa1074440:intron 55.0%
TGGGGGAGCTTACAATGGGT+TGG + chr7_2:72258784-72258803 None:intergenic 55.0%
TGACGGAGCCTACAATGGGT+TGG + chr7_2:72259529-72259548 None:intergenic 55.0%
GGAAACCACACCTTGAGGTG+TGG - chr7_2:72263298-72263317 Msa1074440:intron 55.0%
GCAATCCACACCTCAAGGTG+TGG + chr7_2:72263306-72263325 None:intergenic 55.0%
AGTGGGATAGGTCAGAGCAG+TGG - chr7_2:72267221-72267240 Msa1074440:intron 55.0%
ATAGGTCAGAGCAGTGGCAG+TGG - chr7_2:72267227-72267246 Msa1074440:intron 55.0%
! GTTTTCCTCGGCCACGAGTT+TGG - chr7_2:72267295-72267314 Msa1074440:CDS 55.0%
CGCATGATCCACCAAACTCG+TGG + chr7_2:72267309-72267328 None:intergenic 55.0%
AGGAGTGGCGGCAACCAATA+TGG - chr7_2:72267344-72267363 Msa1074440:CDS 55.0%
GGAGTGGCGGCAACCAATAT+GGG - chr7_2:72267345-72267364 Msa1074440:CDS 55.0%
GAGTGGCGGCAACCAATATG+GGG - chr7_2:72267346-72267365 Msa1074440:CDS 55.0%
GCATGCCCCAAGTGCAGTAA+AGG - chr7_2:72267389-72267408 Msa1074440:CDS 55.0%
ATGGACACCCGTGCCAAGCA+CGG - chr7_2:72257332-72257351 Msa1074440:CDS 60.0%
TTCTAGCCCGTGCTTGGCAC+GGG + chr7_2:72257342-72257361 None:intergenic 60.0%
TATGCTTAACCGGTGCCCCC+GGG + chr7_2:72257972-72257991 None:intergenic 60.0%
GTATGCTTAACCGGTGCCCC+CGG + chr7_2:72257973-72257992 None:intergenic 60.0%
ATCCTTAACCAGGTGCCCCG+GGG - chr7_2:72258096-72258115 Msa1074440:intron 60.0%
AAATGCTAACCGGTGCCCCC+GGG + chr7_2:72258115-72258134 None:intergenic 60.0%
GAAATGCTAACCGGTGCCCC+CGG + chr7_2:72258116-72258135 None:intergenic 60.0%
TTCCTCGGCCACGAGTTTGG+TGG - chr7_2:72267298-72267317 Msa1074440:CDS 60.0%
ATCCACCAAACTCGTGGCCG+AGG + chr7_2:72267303-72267322 None:intergenic 60.0%
TGGACACCCGTGCCAAGCAC+GGG - chr7_2:72257333-72257352 Msa1074440:CDS 65.0%
ATGCTTAACCGGTGCCCCCG+GGG + chr7_2:72257971-72257990 None:intergenic 65.0%
TCCTTAACCAGGTGCCCCGG+GGG - chr7_2:72258097-72258116 Msa1074440:intron 65.0%
AATGCTAACCGGTGCCCCCG+GGG + chr7_2:72258114-72258133 None:intergenic 65.0%
GTCTCTCTGCATCCTGGGGC+AGG + chr7_2:72266972-72266991 None:intergenic 65.0%
GGTCCTGCTAACCGGTGCCC+CGG - chr7_2:72257951-72257970 Msa1074440:intron 70.0%
GTCCTGCTAACCGGTGCCCC+GGG - chr7_2:72257952-72257971 Msa1074440:intron 70.0%
TCCTGCTAACCGGTGCCCCG+GGG - chr7_2:72257953-72257972 Msa1074440:intron 70.0%
CCTGCTAACCGGTGCCCCGG+GGG - chr7_2:72257954-72257973 Msa1074440:intron 75.0%
! GCCCCCGGGGCACCTGGTTA+AGG + chr7_2:72258101-72258120 None:intergenic 75.0%
!!! CCCCCGGGGCACCGGTTAGC+AGG + chr7_2:72257957-72257976 None:intergenic 80.0%
!! AACCGGTGCCCCGGGGGCAC+CGG - chr7_2:72257960-72257979 Msa1074440:intron 80.0%
! AACCGGTGCCCCCGGGGCAC+CGG + chr7_2:72257965-72257984 None:intergenic 80.0%
!! ACCAGGTGCCCCGGGGGCAC+CGG - chr7_2:72258103-72258122 Msa1074440:intron 80.0%
!! ACCGGTGCCCCCGGGGCACC+TGG + chr7_2:72257964-72257983 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 72256701 72267711 72256701 ID=Msa1074440;Name=Msa1074440
chr7_2 mRNA 72256701 72267711 72256701 ID=Msa1074440-mRNA-1;Parent=Msa1074440;Name=Msa1074440-mRNA-1;_AED=0.00;_eAED=0.00;_QI=101|1|1|1|1|1|2|239|348
chr7_2 exon 72256701 72257647 72256701 ID=Msa1074440-mRNA-1:exon:16577;Parent=Msa1074440-mRNA-1
chr7_2 exon 72267272 72267711 72267272 ID=Msa1074440-mRNA-1:exon:16576;Parent=Msa1074440-mRNA-1
chr7_2 five_prime_UTR 72267611 72267711 72267611 ID=Msa1074440-mRNA-1:five_prime_utr;Parent=Msa1074440-mRNA-1
chr7_2 CDS 72267272 72267610 72267272 ID=Msa1074440-mRNA-1:cds;Parent=Msa1074440-mRNA-1
chr7_2 CDS 72256940 72257647 72256940 ID=Msa1074440-mRNA-1:cds;Parent=Msa1074440-mRNA-1
chr7_2 three_prime_UTR 72256701 72256939 72256701 ID=Msa1074440-mRNA-1:three_prime_utr;Parent=Msa1074440-mRNA-1
Gene Sequence

>Msa1074440

ATGAACCAAAATTATGATTCTCTAATTAAATTATTAGAGCGTGGAATTAGGGAGGAGACGATTCCCTCCCATTTCTGGATTTCTGGTTGGTTGGGACATCATCTCTTTTCTCCCTATATCCGCGTAATTCACAATTCTCCACTATTTTTTTTTTTTTTTTTTTTGCGAAATCCATTCCTCATTTATTTTTTTTCTGGAAGGATTTCGTTTCTTCTCTTCGGTTTGAGCTTGGTTTGGATCATGGGGACTCCCGAATTCCCAGATCTAGGCAAGCATTGCTCTGTTTCTGATTGCAGACTCATCGATTTCTTGCCCTTCACTTGTGATCGTTGCAATCAGGTATATTGTTTGGGGCACCGAAGTTATATTGAGCATAATTGTACAAAACCCAACAAACAAGATGTCACCGTTGTTATATGTCCACTTTGTGCTAAAGGGGTTCGCCTAATTCCAGACCAAGATCCAAACACAGTTTGGGAGCGTCATGTGAACACAGACTGTGATCCATCAAATTATGAAAAAGCCACAAAGAAGAAAAAGTGTCCTGCCCCAGGATGCAGAGAGACCTTAGTATTCTCAAACACAATCAAGTGTAGGGACTGTGAGGTTGACCATTGTTTGAAGCACAGGTTTGGACCTGATCACAAATGTCCTGGACCCAAAAAGTTGGAAACAAGTTTTTCATTTATGAGTCTTTGGAATATGAGTAATGGTAAAGAAGAGTCAAAACCCAATTTAACTTCAACCACGTCATCTAAGTGGACTTCAAGCCTTCTTGACTTGGCTTCTAAATTGAGTGGGATAGGTCAGAGCAGTGGCAGTGGTACTAGTAATAATCAACTGGAGAAGTGTCCACTATGTGATGCTAAGTTTTCCTCGGCCACGAGTTTGGTGGATCATGCGAAAAAAGTTCATCAAAGGAGTGGCGGCAACCAATATGGGGCAAAGAAGGTGTCGATTTCTGCATGCCCCAAGTGCAGTAAAGGTTTTCTGGACCCAGTTTCCCTTGTAGAGCATGTTGAGAGGGATCATGGTGGTTGTTCTTGA
Protein sequence

>Msa1074440

MNQNYDSLIKLLERGIREETIPSHFWISGWLGHHLFSPYIRVIHNSPLFFFFFFLRNPFLIYFFSGRISFLLFGLSLVWIMGTPEFPDLGKHCSVSDCRLIDFLPFTCDRCNQVYCLGHRSYIEHNCTKPNKQDVTVVICPLCAKGVRLIPDQDPNTVWERHVNTDCDPSNYEKATKKKKCPAPGCRETLVFSNTIKCRDCEVDHCLKHRFGPDHKCPGPKKLETSFSFMSLWNMSNGKEESKPNLTSTTSSKWTSSLLDLASKLSGIGQSSGSGTSNNQLEKCPLCDAKFSSATSLVDHAKKVHQRSGGNQYGAKKVSISACPKCSKGFLDPVSLVEHVERDHGGCS*