Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074840 | XP_024625805.1 | 98.276 | 348 | 5 | 1 | 1 | 348 | 1 | 347 | 0.0 | 716 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074840 | sp|Q9SVY1|ZWIP2_ARATH | 61.818 | 385 | 96 | 8 | 4 | 348 | 3 | 376 | 8.27e-141 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074840 | A0A396H3I2 | 98.276 | 348 | 5 | 1 | 1 | 348 | 1 | 347 | 0.0 | 716 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1074840 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1074840 | Msa1115730 | 0.871143 | 8.555066e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074840 | MtrunA17_Chr7g0258011 | 98.276 | 348 | 5 | 1 | 1 | 348 | 1 | 347 | 0.0 | 716 |
| Msa1074840 | MtrunA17_Chr1g0173841 | 73.179 | 302 | 55 | 6 | 66 | 348 | 92 | 386 | 3.81e-157 | 446 |
| Msa1074840 | MtrunA17_Chr8g0352011 | 63.103 | 290 | 90 | 4 | 66 | 346 | 54 | 335 | 5.41e-130 | 375 |
| Msa1074840 | MtrunA17_Chr2g0328921 | 66.084 | 286 | 75 | 5 | 67 | 348 | 44 | 311 | 9.69e-130 | 373 |
| Msa1074840 | MtrunA17_Chr2g0321291 | 61.943 | 247 | 81 | 4 | 103 | 348 | 71 | 305 | 1.73e-109 | 322 |
| Msa1074840 | MtrunA17_Chr5g0422571 | 67.421 | 221 | 48 | 4 | 119 | 337 | 64 | 262 | 1.32e-104 | 309 |
| Msa1074840 | MtrunA17_Chr4g0026521 | 75.568 | 176 | 40 | 1 | 174 | 346 | 115 | 290 | 2.90e-102 | 303 |
| Msa1074840 | MtrunA17_Chr1g0198651 | 75.000 | 172 | 40 | 1 | 174 | 342 | 99 | 270 | 2.29e-97 | 290 |
| Msa1074840 | MtrunA17_Chr4g0053341 | 64.762 | 210 | 50 | 3 | 119 | 328 | 40 | 225 | 1.04e-93 | 279 |
| Msa1074840 | MtrunA17_Chr1g0200421 | 38.667 | 150 | 82 | 5 | 184 | 326 | 245 | 391 | 2.57e-25 | 106 |
| Msa1074840 | MtrunA17_Chr2g0320341 | 36.913 | 149 | 87 | 3 | 184 | 325 | 238 | 386 | 1.32e-22 | 97.8 |
| Msa1074840 | MtrunA17_Chr1g0181381 | 32.558 | 172 | 99 | 5 | 177 | 347 | 54 | 209 | 1.30e-21 | 95.5 |
| Msa1074840 | MtrunA17_Chr7g0268961 | 32.558 | 172 | 92 | 6 | 178 | 342 | 33 | 187 | 3.37e-21 | 94.4 |
| Msa1074840 | MtrunA17_Chr1g0191991 | 34.161 | 161 | 86 | 6 | 184 | 342 | 86 | 228 | 3.81e-21 | 94.4 |
| Msa1074840 | MtrunA17_Chr4g0029521 | 33.540 | 161 | 90 | 5 | 184 | 343 | 61 | 205 | 3.99e-21 | 94.4 |
| Msa1074840 | MtrunA17_Chr1g0151351 | 34.146 | 164 | 89 | 6 | 182 | 343 | 62 | 208 | 4.23e-21 | 94.0 |
| Msa1074840 | MtrunA17_Chr1g0185121 | 35.032 | 157 | 83 | 6 | 182 | 336 | 61 | 200 | 4.80e-21 | 93.6 |
| Msa1074840 | MtrunA17_Chr1g0199101 | 33.951 | 162 | 87 | 7 | 177 | 336 | 63 | 206 | 1.17e-20 | 92.8 |
| Msa1074840 | MtrunA17_Chr1g0210821 | 33.540 | 161 | 89 | 6 | 177 | 336 | 60 | 203 | 1.52e-20 | 92.8 |
| Msa1074840 | MtrunA17_Chr1g0162971 | 35.065 | 154 | 82 | 6 | 184 | 336 | 64 | 200 | 1.79e-20 | 92.0 |
| Msa1074840 | MtrunA17_Chr8g0342421 | 33.333 | 159 | 86 | 6 | 184 | 340 | 85 | 225 | 2.32e-20 | 92.0 |
| Msa1074840 | MtrunA17_Chr2g0330171 | 32.716 | 162 | 89 | 6 | 177 | 336 | 62 | 205 | 3.76e-20 | 91.3 |
| Msa1074840 | MtrunA17_Chr1g0163001 | 33.333 | 162 | 90 | 6 | 177 | 337 | 59 | 203 | 6.42e-20 | 90.9 |
| Msa1074840 | MtrunA17_Chr2g0326381 | 35.971 | 139 | 80 | 4 | 184 | 321 | 55 | 185 | 1.11e-19 | 89.4 |
| Msa1074840 | MtrunA17_Chr8g0373541 | 33.548 | 155 | 85 | 5 | 184 | 337 | 56 | 193 | 2.30e-19 | 89.0 |
| Msa1074840 | MtrunA17_Chr7g0263941 | 33.951 | 162 | 87 | 7 | 177 | 336 | 50 | 193 | 2.50e-19 | 88.2 |
| Msa1074840 | MtrunA17_Chr8g0382121 | 37.143 | 140 | 81 | 6 | 192 | 326 | 127 | 264 | 7.02e-19 | 85.9 |
| Msa1074840 | MtrunA17_Chr4g0040571 | 31.395 | 172 | 100 | 5 | 177 | 347 | 55 | 209 | 1.04e-18 | 87.0 |
| Msa1074840 | MtrunA17_Chr3g0123941 | 36.025 | 161 | 93 | 7 | 192 | 348 | 139 | 293 | 2.17e-18 | 84.7 |
| Msa1074840 | MtrunA17_Chr2g0324991 | 34.507 | 142 | 83 | 5 | 177 | 316 | 8 | 141 | 6.26e-17 | 77.0 |
| Msa1074840 | MtrunA17_Chr3g0141431 | 32.117 | 137 | 85 | 3 | 182 | 317 | 43 | 172 | 3.61e-16 | 79.0 |
| Msa1074840 | MtrunA17_Chr8g0375521 | 30.986 | 142 | 87 | 5 | 182 | 320 | 48 | 181 | 2.41e-13 | 70.5 |
| Msa1074840 | MtrunA17_Chr6g0479921 | 30.822 | 146 | 89 | 6 | 182 | 324 | 50 | 186 | 1.06e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074840 | AT3G57670.1 | 61.818 | 385 | 96 | 8 | 4 | 348 | 3 | 376 | 8.40e-142 | 407 |
| Msa1074840 | AT1G51220.1 | 54.722 | 360 | 125 | 8 | 1 | 345 | 1 | 337 | 1.36e-124 | 361 |
| Msa1074840 | AT3G20880.1 | 56.923 | 325 | 107 | 8 | 45 | 345 | 95 | 410 | 1.83e-119 | 351 |
| Msa1074840 | AT1G13290.1 | 68.868 | 212 | 40 | 4 | 119 | 328 | 54 | 241 | 1.08e-102 | 305 |
| Msa1074840 | AT1G34790.1 | 64.159 | 226 | 72 | 1 | 119 | 344 | 83 | 299 | 3.83e-101 | 300 |
| Msa1074840 | AT1G08290.1 | 75.148 | 169 | 38 | 2 | 174 | 338 | 164 | 332 | 3.12e-96 | 289 |
| Msa1074840 | AT1G34370.3 | 38.816 | 152 | 81 | 5 | 184 | 326 | 28 | 176 | 2.97e-26 | 106 |
| Msa1074840 | AT1G34370.2 | 38.816 | 152 | 81 | 5 | 184 | 326 | 238 | 386 | 8.51e-26 | 108 |
| Msa1074840 | AT1G34370.1 | 38.816 | 152 | 81 | 5 | 184 | 326 | 238 | 386 | 8.51e-26 | 108 |
| Msa1074840 | AT5G22890.1 | 39.744 | 156 | 81 | 6 | 184 | 329 | 211 | 363 | 1.54e-23 | 100 |
| Msa1074840 | AT5G03150.1 | 33.333 | 165 | 93 | 5 | 184 | 347 | 76 | 224 | 6.14e-22 | 97.1 |
| Msa1074840 | AT1G55110.3 | 35.404 | 161 | 85 | 6 | 182 | 340 | 84 | 227 | 1.51e-21 | 95.5 |
| Msa1074840 | AT1G55110.1 | 35.404 | 161 | 85 | 6 | 182 | 340 | 84 | 227 | 1.51e-21 | 95.5 |
| Msa1074840 | AT1G55110.2 | 35.404 | 161 | 85 | 6 | 182 | 340 | 84 | 227 | 1.51e-21 | 95.5 |
| Msa1074840 | AT2G02070.2 | 33.540 | 161 | 89 | 5 | 177 | 336 | 68 | 211 | 1.88e-20 | 92.8 |
| Msa1074840 | AT2G02070.1 | 33.540 | 161 | 89 | 5 | 177 | 336 | 68 | 211 | 1.88e-20 | 92.8 |
| Msa1074840 | AT2G02080.1 | 33.974 | 156 | 85 | 5 | 182 | 336 | 75 | 213 | 3.07e-20 | 92.0 |
| Msa1074840 | AT2G02080.4 | 33.974 | 156 | 85 | 5 | 182 | 336 | 75 | 213 | 3.07e-20 | 92.0 |
| Msa1074840 | AT2G02080.5 | 33.974 | 156 | 85 | 5 | 182 | 336 | 75 | 213 | 3.07e-20 | 92.0 |
| Msa1074840 | AT2G02080.3 | 33.974 | 156 | 85 | 5 | 182 | 336 | 75 | 213 | 3.07e-20 | 92.0 |
| Msa1074840 | AT5G66730.1 | 35.032 | 157 | 82 | 7 | 182 | 336 | 53 | 191 | 3.12e-20 | 92.0 |
| Msa1074840 | AT1G14580.1 | 33.951 | 162 | 87 | 6 | 177 | 336 | 69 | 212 | 9.26e-20 | 90.5 |
| Msa1074840 | AT1G14580.2 | 33.951 | 162 | 87 | 6 | 177 | 336 | 69 | 212 | 9.26e-20 | 90.5 |
| Msa1074840 | AT1G14580.3 | 33.951 | 162 | 87 | 6 | 177 | 336 | 83 | 226 | 9.97e-20 | 90.5 |
| Msa1074840 | AT2G02080.6 | 34.641 | 153 | 82 | 5 | 185 | 336 | 1 | 136 | 1.68e-19 | 89.4 |
| Msa1074840 | AT2G02080.2 | 34.641 | 153 | 82 | 5 | 185 | 336 | 1 | 136 | 1.68e-19 | 89.4 |
| Msa1074840 | AT3G45260.2 | 35.065 | 154 | 83 | 5 | 184 | 336 | 62 | 199 | 3.03e-19 | 89.0 |
| Msa1074840 | AT3G45260.1 | 35.065 | 154 | 83 | 5 | 184 | 336 | 62 | 199 | 3.03e-19 | 89.0 |
| Msa1074840 | AT5G44160.2 | 31.515 | 165 | 95 | 5 | 184 | 347 | 21 | 168 | 1.15e-18 | 87.0 |
| Msa1074840 | AT5G60470.1 | 33.117 | 154 | 86 | 5 | 184 | 336 | 58 | 195 | 1.21e-18 | 87.0 |
| Msa1074840 | AT5G44160.1 | 31.515 | 165 | 95 | 5 | 184 | 347 | 60 | 207 | 1.33e-18 | 87.0 |
| Msa1074840 | AT5G60470.3 | 33.117 | 154 | 86 | 5 | 184 | 336 | 63 | 200 | 1.41e-18 | 87.0 |
| Msa1074840 | AT5G60470.2 | 33.117 | 154 | 86 | 5 | 184 | 336 | 67 | 204 | 1.42e-18 | 87.0 |
| Msa1074840 | AT4G02670.1 | 32.298 | 161 | 92 | 4 | 177 | 336 | 69 | 213 | 1.78e-18 | 86.3 |
| Msa1074840 | AT4G02670.2 | 32.298 | 161 | 92 | 4 | 177 | 336 | 71 | 215 | 1.91e-18 | 86.3 |
| Msa1074840 | AT3G50700.1 | 32.484 | 157 | 88 | 5 | 182 | 337 | 55 | 194 | 1.97e-18 | 86.3 |
| Msa1074840 | AT1G03840.2 | 32.298 | 161 | 91 | 6 | 177 | 336 | 55 | 198 | 3.36e-18 | 85.9 |
| Msa1074840 | AT1G03840.1 | 31.056 | 161 | 93 | 5 | 177 | 336 | 57 | 200 | 3.57e-18 | 85.9 |
| Msa1074840 | AT3G13810.5 | 31.677 | 161 | 93 | 5 | 177 | 336 | 81 | 225 | 1.35e-17 | 84.3 |
| Msa1074840 | AT3G13810.4 | 31.677 | 161 | 93 | 5 | 177 | 336 | 86 | 230 | 1.39e-17 | 84.3 |
| Msa1074840 | AT3G13810.1 | 31.677 | 161 | 93 | 5 | 177 | 336 | 86 | 230 | 1.39e-17 | 84.3 |
| Msa1074840 | AT3G13810.2 | 31.677 | 161 | 93 | 5 | 177 | 336 | 87 | 231 | 1.47e-17 | 84.0 |
| Msa1074840 | AT3G13810.6 | 31.677 | 161 | 93 | 5 | 177 | 336 | 67 | 211 | 1.57e-17 | 84.0 |
| Msa1074840 | AT3G13810.3 | 31.677 | 161 | 93 | 5 | 177 | 336 | 73 | 217 | 1.71e-17 | 84.0 |
| Msa1074840 | AT1G25250.3 | 29.496 | 139 | 88 | 5 | 182 | 317 | 54 | 185 | 1.80e-13 | 71.2 |
| Msa1074840 | AT1G25250.1 | 29.496 | 139 | 88 | 5 | 182 | 317 | 31 | 162 | 2.10e-13 | 70.9 |
| Msa1074840 | AT1G68130.1 | 30.935 | 139 | 85 | 5 | 182 | 317 | 62 | 192 | 3.83e-13 | 70.5 |
Find 85 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCAATTAATTAGTTTAAA+TGG | 0.155787 | 7_2:-72853126 | Msa1074840:three_prime_UTR |
| TTCCATTTAAACTAATTAAT+TGG | 0.202295 | 7_2:+72853124 | None:intergenic |
| GATCAAGTGGGAACAGTTTA+TGG | 0.228592 | 7_2:+72855737 | None:intergenic |
| CAGGATTCATGGTTAATAAT+AGG | 0.242177 | 7_2:-72855210 | Msa1074840:CDS |
| AAAGATCATATCAAAGCTTT+TGG | 0.279015 | 7_2:-72853292 | Msa1074840:CDS |
| TGTGTGCCTCTTAGAGATTC+AGG | 0.280812 | 7_2:+72853577 | None:intergenic |
| GGAAGTGGACATGCTGCTTA+TGG | 0.286552 | 7_2:-72853271 | Msa1074840:CDS |
| AGCAAATGTTCCAACATAAA+AGG | 0.288527 | 7_2:+72853078 | None:intergenic |
| GTTGGTGAGGATTCTTGTTC+AGG | 0.320459 | 7_2:-72855229 | Msa1074840:CDS |
| AAAAGAATTGTGGGAAGCTT+TGG | 0.349652 | 7_2:-72853357 | Msa1074840:CDS |
| GAAGAGAAAAGATTAGAGTA+AGG | 0.352738 | 7_2:+72855682 | None:intergenic |
| GGATTCTTGTTCAGGATTCA+TGG | 0.360583 | 7_2:-72855221 | Msa1074840:CDS |
| ATGATGATGATAGTGGAAAA+AGG | 0.364911 | 7_2:+72855552 | None:intergenic |
| AAACCCTAGTGCTGCTGAAA+TGG | 0.370039 | 7_2:-72855311 | Msa1074840:CDS |
| GGCTTAACAAAGGACAATAT+TGG | 0.383450 | 7_2:-72855189 | Msa1074840:CDS |
| CCTTGTTACTGTTGTGCACC+AGG | 0.388233 | 7_2:-72853532 | Msa1074840:CDS |
| AGAGGTAGTTCTTCTCTTAG+AGG | 0.403255 | 7_2:+72855502 | None:intergenic |
| ACTCCTTCTCAGATTCTCAT+TGG | 0.410986 | 7_2:-72855160 | Msa1074840:CDS |
| TCTTTGAGAGGCTTTGCTCT+TGG | 0.418075 | 7_2:+72853487 | None:intergenic |
| GAAGTGGACATGCTGCTTAT+GGG | 0.418215 | 7_2:-72853270 | Msa1074840:CDS |
| ATTTCAGCAGCACTAGGGTT+TGG | 0.419339 | 7_2:+72855313 | None:intergenic |
| GATCTCTGAGGAGTTATTAG+AGG | 0.433036 | 7_2:+72855273 | None:intergenic |
| GAAGGGTTTGAATTTGAAGA+TGG | 0.443053 | 7_2:+72855625 | None:intergenic |
| AGGAAATATGATGATGATAG+TGG | 0.447261 | 7_2:+72855545 | None:intergenic |
| TTCCCTTTCTTCTAAATCCA+TGG | 0.448360 | 7_2:+72855393 | None:intergenic |
| ATTAATTAGTTTAAATGGAA+AGG | 0.455213 | 7_2:-72853121 | Msa1074840:three_prime_UTR |
| AGACCTTCCTTGCACTGCCA+TGG | 0.468218 | 7_2:-72855410 | Msa1074840:CDS |
| TGCCATGGATTTAGAAGAAA+GGG | 0.480220 | 7_2:-72855395 | Msa1074840:CDS |
| TCTTGCTCTACTTCAGAAGC+TGG | 0.480582 | 7_2:+72853220 | None:intergenic |
| AGGAGAAGGTGGTGAAGAAG+AGG | 0.481051 | 7_2:+72855525 | None:intergenic |
| CTAAGAGGCACACAACCAAC+AGG | 0.487480 | 7_2:-72853568 | Msa1074840:CDS |
| TTGTTGTGGTGGTGAAGAAA+AGG | 0.494029 | 7_2:+72855586 | None:intergenic |
| GAAGCCATTTCAGCAGCACT+AGG | 0.500052 | 7_2:+72855307 | None:intergenic |
| TCTTCTCTTAGAGGAGGAGA+AGG | 0.501187 | 7_2:+72855511 | None:intergenic |
| AAGAGAAAAGATTAGAGTAA+GGG | 0.501589 | 7_2:+72855683 | None:intergenic |
| GAACTCATGAAAAGAATTGT+GGG | 0.503233 | 7_2:-72853366 | Msa1074840:CDS |
| AGAACTCATGAAAAGAATTG+TGG | 0.519976 | 7_2:-72853367 | Msa1074840:CDS |
| TTAGAAGAAAGGGAAGAAGA+TGG | 0.524706 | 7_2:-72855385 | Msa1074840:CDS |
| TTTATGTTGGAACATTTGCT+AGG | 0.525943 | 7_2:-72853075 | Msa1074840:three_prime_UTR |
| GTTACTGTTGCACTTCACAT+AGG | 0.528079 | 7_2:-72855340 | Msa1074840:CDS |
| ATGAGAATCTGAGAAGGAGT+AGG | 0.530035 | 7_2:+72855163 | None:intergenic |
| TGTTGTGGTGGTGAAGAAAA+GGG | 0.533983 | 7_2:+72855587 | None:intergenic |
| CATGCTGCTTATGGGTGTGA+TGG | 0.534441 | 7_2:-72853262 | Msa1074840:CDS |
| GTTGGAATTAGGCTTAAAAG+AGG | 0.534675 | 7_2:+72855484 | None:intergenic |
| CATGGATCACAGTACAGAAA+AGG | 0.538411 | 7_2:-72853601 | Msa1074840:CDS |
| CTGCCATGGATTTAGAAGAA+AGG | 0.539425 | 7_2:-72855396 | Msa1074840:CDS |
| AATCCATGGCAGTGCAAGGA+AGG | 0.544023 | 7_2:+72855407 | None:intergenic |
| AGGTATGGTTATTGTTGTTG+TGG | 0.546230 | 7_2:+72855572 | None:intergenic |
| CTCATCAAATAATATATCCA+TGG | 0.548772 | 7_2:-72855713 | Msa1074840:exon |
| GGTGGTGAAGAAAAGGGTGG+TGG | 0.550176 | 7_2:+72855593 | None:intergenic |
| TATGGTTATTGTTGTTGTGG+TGG | 0.558394 | 7_2:+72855575 | None:intergenic |
| AAGCTTTGGTATTGTATCTG+TGG | 0.559395 | 7_2:-72853343 | Msa1074840:CDS |
| ACACATTACAAGAGGAAACA+TGG | 0.569309 | 7_2:-72853448 | Msa1074840:CDS |
| ACAGGGCAAGAAAACTGAGT+TGG | 0.573007 | 7_2:+72855136 | None:intergenic |
| TGAGAATCTGAGAAGGAGTA+GGG | 0.575360 | 7_2:+72855164 | None:intergenic |
| AAAGGTCCTGAATCTCTAAG+AGG | 0.580235 | 7_2:-72853583 | Msa1074840:CDS |
| AGTGTTCTAAAATCTTTGAG+AGG | 0.584894 | 7_2:+72853475 | None:intergenic |
| CTTGTTACTGTTGTGCACCA+GGG | 0.585436 | 7_2:-72853531 | Msa1074840:CDS |
| AGAGTAAGGGTTATCAGCCA+TGG | 0.585920 | 7_2:+72855696 | None:intergenic |
| TCTCTTAGAGGAGGAGAAGG+TGG | 0.585932 | 7_2:+72855514 | None:intergenic |
| AGAGAGTACAAGATGGCTGA+AGG | 0.588675 | 7_2:+72855795 | None:intergenic |
| TTATTTGATGAGAGATCAAG+TGG | 0.593566 | 7_2:+72855724 | None:intergenic |
| GGTAGTTCTTCTCTTAGAGG+AGG | 0.595867 | 7_2:+72855505 | None:intergenic |
| CACTTCAAACACATTACAAG+AGG | 0.601250 | 7_2:-72853456 | Msa1074840:CDS |
| AAGCCATTTCAGCAGCACTA+GGG | 0.602433 | 7_2:+72855308 | None:intergenic |
| TCTAAATCCATGGCAGTGCA+AGG | 0.604858 | 7_2:+72855403 | None:intergenic |
| GGTAGCCTTAGCATTCCTGT+TGG | 0.607467 | 7_2:+72853553 | None:intergenic |
| TCAATGTTGTTTCTGCACCC+TGG | 0.610178 | 7_2:+72853514 | None:intergenic |
| CACAACCAACAGGAATGCTA+AGG | 0.612992 | 7_2:-72853558 | Msa1074840:CDS |
| AAGATGGCTGAAGGAAGTAG+TGG | 0.613233 | 7_2:+72855804 | None:intergenic |
| ATCACTGATAAAGAACATGT+TGG | 0.619011 | 7_2:-72855247 | Msa1074840:CDS |
| CAATAGATATAACAACATGC+AGG | 0.621278 | 7_2:-72855098 | Msa1074840:intron |
| GGACCAATGAGAATCTGAGA+AGG | 0.626496 | 7_2:+72855157 | None:intergenic |
| GTTAATAATAGGCTTAACAA+AGG | 0.627528 | 7_2:-72855199 | Msa1074840:CDS |
| TGATAAAGAACATGTTGGTG+AGG | 0.633314 | 7_2:-72855242 | Msa1074840:CDS |
| AGATCAACAAGAACATGAGG+TGG | 0.635764 | 7_2:-72855440 | Msa1074840:CDS |
| CATGTGTAGAAAATGTAGCA+AGG | 0.640710 | 7_2:-72853413 | Msa1074840:CDS |
| CCTGGTGCACAACAGTAACA+AGG | 0.646997 | 7_2:+72853532 | None:intergenic |
| TGAAGATCAACAAGAACATG+AGG | 0.648021 | 7_2:-72855443 | Msa1074840:CDS |
| TGGCTGAAGGAAGTAGTGGA+CGG | 0.664653 | 7_2:+72855808 | None:intergenic |
| GTGTGATGGATTTGAAGAAG+AGG | 0.666362 | 7_2:-72853248 | Msa1074840:CDS |
| TGTGGTGGTGAAGAAAAGGG+TGG | 0.675317 | 7_2:+72855590 | None:intergenic |
| CTGAAGGAAGTAGTGGACGG+TGG | 0.680102 | 7_2:+72855811 | None:intergenic |
| ATCAGTGATAGTGATCTCTG+AGG | 0.722446 | 7_2:+72855261 | None:intergenic |
| TATTTGATGAGAGATCAAGT+GGG | 0.793929 | 7_2:+72855725 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTAAAATTACAGTTT+TGG | - | chr7_2:72854828-72854847 | Msa1074840:intron | 10.0% |
| !! | AAAATAAAATTGATTACTAA+GGG | + | chr7_2:72854960-72854979 | None:intergenic | 10.0% |
| !! | AAAAATAAAATTGATTACTA+AGG | + | chr7_2:72854961-72854980 | None:intergenic | 10.0% |
| !!! | TTTTAAACCTTGAATTATAA+AGG | + | chr7_2:72853924-72853943 | None:intergenic | 15.0% |
| !! | ATAGCATATATTAATTTCAT+TGG | - | chr7_2:72854233-72854252 | Msa1074840:intron | 15.0% |
| !!! | TACCAATTAATTAGTTTAAA+TGG | - | chr7_2:72855790-72855809 | Msa1074840:five_prime_UTR | 15.0% |
| !! | TTCCATTTAAACTAATTAAT+TGG | + | chr7_2:72855795-72855814 | None:intergenic | 15.0% |
| !!! | ATTAATTAGTTTAAATGGAA+AGG | - | chr7_2:72855795-72855814 | Msa1074840:five_prime_UTR | 15.0% |
| !! | AATTTGAAGATGGAAAAATA+TGG | + | chr7_2:72853284-72853303 | None:intergenic | 20.0% |
| !!! | TCATATTTTTCTTGTTTTGT+TGG | + | chr7_2:72853453-72853472 | None:intergenic | 20.0% |
| !! | AAAAAATTTCTGTTCTATAC+AGG | + | chr7_2:72854490-72854509 | None:intergenic | 20.0% |
| !!! | ATTTATTTTAATGATCGATC+TGG | + | chr7_2:72854524-72854543 | None:intergenic | 20.0% |
| !! | ATTAAACTATGGAAAAAAGA+AGG | + | chr7_2:72854617-72854636 | None:intergenic | 20.0% |
| !!! | AAAAACTAAAGAAGAGTTTT+TGG | + | chr7_2:72854789-72854808 | None:intergenic | 20.0% |
| !!! | TGTCTTCAATTTTTTAGTTT+TGG | - | chr7_2:72854855-72854874 | Msa1074840:intron | 20.0% |
| !!! | GTCTTCAATTTTTTAGTTTT+GGG | - | chr7_2:72854856-72854875 | Msa1074840:intron | 20.0% |
| !! | TTTCAAAAACTATTTCAAAC+AGG | - | chr7_2:72854934-72854953 | Msa1074840:intron | 20.0% |
| !! | AAAATACTATCACAAAAAGT+TGG | + | chr7_2:72855002-72855021 | None:intergenic | 20.0% |
| !! | TATTAATGTACAATCATGAA+GGG | + | chr7_2:72855066-72855085 | None:intergenic | 20.0% |
| !! | TTATTAATGTACAATCATGA+AGG | + | chr7_2:72855067-72855086 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTTCCTTTTATGT+TGG | - | chr7_2:72855828-72855847 | Msa1074840:five_prime_UTR | 20.0% |
| ! | CTCATCAAATAATATATCCA+TGG | - | chr7_2:72853203-72853222 | Msa1074840:exon | 25.0% |
| ! | AAGAGAAAAGATTAGAGTAA+GGG | + | chr7_2:72853236-72853255 | None:intergenic | 25.0% |
| ! | ATGGAAAAATATGGTTGAAT+TGG | + | chr7_2:72853275-72853294 | None:intergenic | 25.0% |
| !!! | TTTCTTGTTTTGTTGGAATT+AGG | + | chr7_2:72853446-72853465 | None:intergenic | 25.0% |
| ! | GTTAATAATAGGCTTAACAA+AGG | - | chr7_2:72853717-72853736 | Msa1074840:intron | 25.0% |
| ! | AGAAAGTTATTGACAGAAAA+GGG | + | chr7_2:72853991-72854010 | None:intergenic | 25.0% |
| ! | AAGAAAGTTATTGACAGAAA+AGG | + | chr7_2:72853992-72854011 | None:intergenic | 25.0% |
| ! | CAAAAAGAAAGAAATGAAAG+AGG | + | chr7_2:72854103-72854122 | None:intergenic | 25.0% |
| !! | TTCTGAAGAAAGAAAAAAGA+AGG | + | chr7_2:72854187-72854206 | None:intergenic | 25.0% |
| ! | AGTTTAGTCAATCAAAGAAA+AGG | + | chr7_2:72854399-72854418 | None:intergenic | 25.0% |
| ! | ACAGATTTCAATGTAGTAAA+AGG | + | chr7_2:72854443-72854462 | None:intergenic | 25.0% |
| ! | TAAAAAATTGTTCCTCTTTG+TGG | - | chr7_2:72854547-72854566 | Msa1074840:intron | 25.0% |
| ! | CATTTAGAGATAGAAAAATG+TGG | - | chr7_2:72854712-72854731 | Msa1074840:intron | 25.0% |
| !! | TACAAGTCTTCTTTTTACAA+TGG | + | chr7_2:72854912-72854931 | None:intergenic | 25.0% |
| !! | TTCAGTAGATCTTGATAATA+AGG | + | chr7_2:72855137-72855156 | None:intergenic | 25.0% |
| !!! | TGTTTTTATAGATGCATATG+TGG | - | chr7_2:72855289-72855308 | Msa1074840:CDS | 25.0% |
| !! | GTTTTTATAGATGCATATGT+GGG | - | chr7_2:72855290-72855309 | Msa1074840:CDS | 25.0% |
| !! | TTTTTATAGATGCATATGTG+GGG | - | chr7_2:72855291-72855310 | Msa1074840:CDS | 25.0% |
| !! | AAAGATCATATCAAAGCTTT+TGG | - | chr7_2:72855624-72855643 | Msa1074840:CDS | 25.0% |
| TATTTGATGAGAGATCAAGT+GGG | + | chr7_2:72853194-72853213 | None:intergenic | 30.0% | |
| TTATTTGATGAGAGATCAAG+TGG | + | chr7_2:72853195-72853214 | None:intergenic | 30.0% | |
| GAAGAGAAAAGATTAGAGTA+AGG | + | chr7_2:72853237-72853256 | None:intergenic | 30.0% | |
| !! | ATGATGATGATAGTGGAAAA+AGG | + | chr7_2:72853367-72853386 | None:intergenic | 30.0% |
| ! | AGGAAATATGATGATGATAG+TGG | + | chr7_2:72853374-72853393 | None:intergenic | 30.0% |
| ATCACTGATAAAGAACATGT+TGG | - | chr7_2:72853669-72853688 | Msa1074840:intron | 30.0% | |
| CAGGATTCATGGTTAATAAT+AGG | - | chr7_2:72853706-72853725 | Msa1074840:intron | 30.0% | |
| !!! | TGAAAGTTTTAGAGCAAACA+GGG | + | chr7_2:72853800-72853819 | None:intergenic | 30.0% |
| !!! | TTGAAAGTTTTAGAGCAAAC+AGG | + | chr7_2:72853801-72853820 | None:intergenic | 30.0% |
| CAATAGATATAACAACATGC+AGG | - | chr7_2:72853818-72853837 | Msa1074840:intron | 30.0% | |
| TGAAACAAAACAGAAGAACA+AGG | + | chr7_2:72853889-72853908 | None:intergenic | 30.0% | |
| CACACTTCCTTTATAATTCA+AGG | - | chr7_2:72853914-72853933 | Msa1074840:intron | 30.0% | |
| ! | TCCTTGATTTGAACCATTAA+CGG | - | chr7_2:72854011-72854030 | Msa1074840:intron | 30.0% |
| GAAAGAAAAAAGAAGGAAAG+AGG | + | chr7_2:72854180-72854199 | None:intergenic | 30.0% | |
| ! | AGCTAGTGTTAAATTTTGCA+TGG | - | chr7_2:72854292-72854311 | Msa1074840:intron | 30.0% |
| TCTCTCAGTATATATGAATC+AGG | + | chr7_2:72854349-72854368 | None:intergenic | 30.0% | |
| ATTCATATATACTGAGAGAC+TGG | - | chr7_2:72854350-72854369 | Msa1074840:intron | 30.0% | |
| TTCATATATACTGAGAGACT+GGG | - | chr7_2:72854351-72854370 | Msa1074840:intron | 30.0% | |
| AGTCAATCAAAGAAAAGGAA+AGG | + | chr7_2:72854394-72854413 | None:intergenic | 30.0% | |
| ! | TCAATGTAGTAAAAGGCATA+AGG | + | chr7_2:72854436-72854455 | None:intergenic | 30.0% |
| AATTTCTGTTCTATACAGGT+GGG | + | chr7_2:72854486-72854505 | None:intergenic | 30.0% | |
| AAATTTCTGTTCTATACAGG+TGG | + | chr7_2:72854487-72854506 | None:intergenic | 30.0% | |
| ATTTGGATGGTATATTAGCA+TGG | + | chr7_2:72854591-72854610 | None:intergenic | 30.0% | |
| AAAAAGAAGGCAAATTTGGA+TGG | + | chr7_2:72854604-72854623 | None:intergenic | 30.0% | |
| TGGAAAAAAGAAGGCAAATT+TGG | + | chr7_2:72854608-72854627 | None:intergenic | 30.0% | |
| !!! | TTTTGGAAAGTGTTTCAAAC+AGG | + | chr7_2:72854772-72854791 | None:intergenic | 30.0% |
| TGAAGGGCAAAGATTTAATT+TGG | + | chr7_2:72855050-72855069 | None:intergenic | 30.0% | |
| ! | GTAGATCTTGATAATAAGGT+CGG | + | chr7_2:72855133-72855152 | None:intergenic | 30.0% |
| ! | TTTTATAGATGCATATGTGG+GGG | - | chr7_2:72855292-72855311 | Msa1074840:CDS | 30.0% |
| !! | AGTGTTCTAAAATCTTTGAG+AGG | + | chr7_2:72855444-72855463 | None:intergenic | 30.0% |
| ! | CTACATTTTCTACACATGAA+TGG | + | chr7_2:72855501-72855520 | None:intergenic | 30.0% |
| AGAACTCATGAAAAGAATTG+TGG | - | chr7_2:72855549-72855568 | Msa1074840:CDS | 30.0% | |
| GAACTCATGAAAAGAATTGT+GGG | - | chr7_2:72855550-72855569 | Msa1074840:CDS | 30.0% | |
| ! | GTTCTGATTTTAAACACAAG+AGG | - | chr7_2:72855595-72855614 | Msa1074840:CDS | 30.0% |
| AGCAAATGTTCCAACATAAA+AGG | + | chr7_2:72855841-72855860 | None:intergenic | 30.0% | |
| TTTATGTTGGAACATTTGCT+AGG | - | chr7_2:72855841-72855860 | Msa1074840:five_prime_UTR | 30.0% | |
| GAAGGGTTTGAATTTGAAGA+TGG | + | chr7_2:72853294-72853313 | None:intergenic | 35.0% | |
| ! | TATGGTTATTGTTGTTGTGG+TGG | + | chr7_2:72853344-72853363 | None:intergenic | 35.0% |
| ! | AGGTATGGTTATTGTTGTTG+TGG | + | chr7_2:72853347-72853366 | None:intergenic | 35.0% |
| !! | GATGATAGTGGAAAAAGGTA+TGG | + | chr7_2:72853362-72853381 | None:intergenic | 35.0% |
| GTTGGAATTAGGCTTAAAAG+AGG | + | chr7_2:72853435-72853454 | None:intergenic | 35.0% | |
| TGAAGATCAACAAGAACATG+AGG | - | chr7_2:72853473-72853492 | Msa1074840:CDS | 35.0% | |
| TGCCATGGATTTAGAAGAAA+GGG | - | chr7_2:72853521-72853540 | Msa1074840:CDS | 35.0% | |
| TTCCCTTTCTTCTAAATCCA+TGG | + | chr7_2:72853526-72853545 | None:intergenic | 35.0% | |
| TTAGAAGAAAGGGAAGAAGA+TGG | - | chr7_2:72853531-72853550 | Msa1074840:CDS | 35.0% | |
| TGATAAAGAACATGTTGGTG+AGG | - | chr7_2:72853674-72853693 | Msa1074840:intron | 35.0% | |
| GGCTTAACAAAGGACAATAT+TGG | - | chr7_2:72853727-72853746 | Msa1074840:intron | 35.0% | |
| AAACAGAAGAACAAGGTCTT+TGG | + | chr7_2:72853882-72853901 | None:intergenic | 35.0% | |
| ACCGTTAATGGTTCAAATCA+AGG | + | chr7_2:72854015-72854034 | None:intergenic | 35.0% | |
| AAAAAGAAGGAAAGAGGTCA+AGG | + | chr7_2:72854174-72854193 | None:intergenic | 35.0% | |
| ! | GCTATAACTCTAGAAGAAAG+AGG | + | chr7_2:72854218-72854237 | None:intergenic | 35.0% |
| ! | AGAAAAGGAAAGGTGTAGTA+AGG | + | chr7_2:72854384-72854403 | None:intergenic | 35.0% |
| GTATATTAGCATGGTTGGAT+TGG | + | chr7_2:72854582-72854601 | None:intergenic | 35.0% | |
| CACTTCAAACACATTACAAG+AGG | - | chr7_2:72855460-72855479 | Msa1074840:CDS | 35.0% | |
| ACACATTACAAGAGGAAACA+TGG | - | chr7_2:72855468-72855487 | Msa1074840:CDS | 35.0% | |
| CATGTGTAGAAAATGTAGCA+AGG | - | chr7_2:72855503-72855522 | Msa1074840:CDS | 35.0% | |
| AAAAGAATTGTGGGAAGCTT+TGG | - | chr7_2:72855559-72855578 | Msa1074840:CDS | 35.0% | |
| ! | AAGCTTTGGTATTGTATCTG+TGG | - | chr7_2:72855573-72855592 | Msa1074840:CDS | 35.0% |
| !! | CATATCAAAGCTTTTGGAAG+TGG | - | chr7_2:72855630-72855649 | Msa1074840:CDS | 35.0% |
| GATCAAGTGGGAACAGTTTA+TGG | + | chr7_2:72853182-72853201 | None:intergenic | 40.0% | |
| ! | TGTTGTGGTGGTGAAGAAAA+GGG | + | chr7_2:72853332-72853351 | None:intergenic | 40.0% |
| ! | TTGTTGTGGTGGTGAAGAAA+AGG | + | chr7_2:72853333-72853352 | None:intergenic | 40.0% |
| AGAGGTAGTTCTTCTCTTAG+AGG | + | chr7_2:72853417-72853436 | None:intergenic | 40.0% | |
| AGATCAACAAGAACATGAGG+TGG | - | chr7_2:72853476-72853495 | Msa1074840:CDS | 40.0% | |
| CTGCCATGGATTTAGAAGAA+AGG | - | chr7_2:72853520-72853539 | Msa1074840:CDS | 40.0% | |
| GTTACTGTTGCACTTCACAT+AGG | - | chr7_2:72853576-72853595 | Msa1074840:CDS | 40.0% | |
| ! | GATCTCTGAGGAGTTATTAG+AGG | + | chr7_2:72853646-72853665 | None:intergenic | 40.0% |
| ! | ATCAGTGATAGTGATCTCTG+AGG | + | chr7_2:72853658-72853677 | None:intergenic | 40.0% |
| GGATTCTTGTTCAGGATTCA+TGG | - | chr7_2:72853695-72853714 | Msa1074840:intron | 40.0% | |
| TGAGAATCTGAGAAGGAGTA+GGG | + | chr7_2:72853755-72853774 | None:intergenic | 40.0% | |
| ATGAGAATCTGAGAAGGAGT+AGG | + | chr7_2:72853756-72853775 | None:intergenic | 40.0% | |
| ACTCCTTCTCAGATTCTCAT+TGG | - | chr7_2:72853756-72853775 | Msa1074840:intron | 40.0% | |
| AAGCATCAGAGAACCGTTAA+TGG | + | chr7_2:72854027-72854046 | None:intergenic | 40.0% | |
| ATTAACGGTTCTCTGATGCT+TGG | - | chr7_2:72854026-72854045 | Msa1074840:intron | 40.0% | |
| TCTGATGCTTGGATAGAAAG+AGG | - | chr7_2:72854037-72854056 | Msa1074840:intron | 40.0% | |
| GGATGGTATATTAGCATGGT+TGG | + | chr7_2:72854587-72854606 | None:intergenic | 40.0% | |
| CATGGATCACAGTACAGAAA+AGG | - | chr7_2:72855315-72855334 | Msa1074840:CDS | 40.0% | |
| AAAGGTCCTGAATCTCTAAG+AGG | - | chr7_2:72855333-72855352 | Msa1074840:CDS | 40.0% | |
| !!! | CTTTTGCTGTTAGAGGAGAT+TGG | - | chr7_2:72855526-72855545 | Msa1074840:CDS | 40.0% |
| !! | GTGTGATGGATTTGAAGAAG+AGG | - | chr7_2:72855668-72855687 | Msa1074840:CDS | 40.0% |
| AAGATGGCTGAAGGAAGTAG+TGG | + | chr7_2:72853115-72853134 | None:intergenic | 45.0% | |
| ! | AGAGAGTACAAGATGGCTGA+AGG | + | chr7_2:72853124-72853143 | None:intergenic | 45.0% |
| ! | GAGAGAGAGAGAGTACAAGA+TGG | + | chr7_2:72853131-72853150 | None:intergenic | 45.0% |
| AGAGTAAGGGTTATCAGCCA+TGG | + | chr7_2:72853223-72853242 | None:intergenic | 45.0% | |
| !! | AGAAAAGGGTGGTGGTTTTG+TGG | + | chr7_2:72853318-72853337 | None:intergenic | 45.0% |
| TCTTCTCTTAGAGGAGGAGA+AGG | + | chr7_2:72853408-72853427 | None:intergenic | 45.0% | |
| GGTAGTTCTTCTCTTAGAGG+AGG | + | chr7_2:72853414-72853433 | None:intergenic | 45.0% | |
| TCTAAATCCATGGCAGTGCA+AGG | + | chr7_2:72853516-72853535 | None:intergenic | 45.0% | |
| ATTTCAGCAGCACTAGGGTT+TGG | + | chr7_2:72853606-72853625 | None:intergenic | 45.0% | |
| ! | AAACCCTAGTGCTGCTGAAA+TGG | - | chr7_2:72853605-72853624 | Msa1074840:CDS | 45.0% |
| AAGCCATTTCAGCAGCACTA+GGG | + | chr7_2:72853611-72853630 | None:intergenic | 45.0% | |
| ! | GTTGGTGAGGATTCTTGTTC+AGG | - | chr7_2:72853687-72853706 | Msa1074840:intron | 45.0% |
| GGACCAATGAGAATCTGAGA+AGG | + | chr7_2:72853762-72853781 | None:intergenic | 45.0% | |
| ACAGGGCAAGAAAACTGAGT+TGG | + | chr7_2:72853783-72853802 | None:intergenic | 45.0% | |
| AGAAGCAGAAGCAGAAGCAA+TGG | + | chr7_2:72853964-72853983 | None:intergenic | 45.0% | |
| TGGACTAAGAAGCCACAAAG+AGG | + | chr7_2:72854562-72854581 | None:intergenic | 45.0% | |
| TGTGTGCCTCTTAGAGATTC+AGG | + | chr7_2:72855342-72855361 | None:intergenic | 45.0% | |
| CACAACCAACAGGAATGCTA+AGG | - | chr7_2:72855358-72855377 | Msa1074840:CDS | 45.0% | |
| CTTGTTACTGTTGTGCACCA+GGG | - | chr7_2:72855385-72855404 | Msa1074840:CDS | 45.0% | |
| !! | TCAATGTTGTTTCTGCACCC+TGG | + | chr7_2:72855405-72855424 | None:intergenic | 45.0% |
| ! | TCTTTGAGAGGCTTTGCTCT+TGG | + | chr7_2:72855432-72855451 | None:intergenic | 45.0% |
| !!! | AGCAAGGCTTTTGCTGTTAG+AGG | - | chr7_2:72855519-72855538 | Msa1074840:CDS | 45.0% |
| ! | GAAGTGGACATGCTGCTTAT+GGG | - | chr7_2:72855646-72855665 | Msa1074840:CDS | 45.0% |
| TCTTGCTCTACTTCAGAAGC+TGG | + | chr7_2:72855699-72855718 | None:intergenic | 45.0% | |
| !!! | TTTATTTTAAGAAATAATTT+TGG | - | chr7_2:72854266-72854285 | Msa1074840:intron | 5.0% |
| !!! | TTATTTTAAGAAATAATTTT+GGG | - | chr7_2:72854267-72854286 | Msa1074840:intron | 5.0% |
| !! | AATATAATTTAATTAAACTA+TGG | + | chr7_2:72854628-72854647 | None:intergenic | 5.0% |
| !!! | CAAAATAAATATTTTTATTT+TGG | + | chr7_2:72855178-72855197 | None:intergenic | 5.0% |
| ! | TGGCTGAAGGAAGTAGTGGA+CGG | + | chr7_2:72853111-72853130 | None:intergenic | 50.0% |
| !!! | GGTGGTGGTTTTGTGGAGAA+GGG | + | chr7_2:72853311-72853330 | None:intergenic | 50.0% |
| ! | TGTGGTGGTGAAGAAAAGGG+TGG | + | chr7_2:72853329-72853348 | None:intergenic | 50.0% |
| AGGAGAAGGTGGTGAAGAAG+AGG | + | chr7_2:72853394-72853413 | None:intergenic | 50.0% | |
| TCTCTTAGAGGAGGAGAAGG+TGG | + | chr7_2:72853405-72853424 | None:intergenic | 50.0% | |
| AATCCATGGCAGTGCAAGGA+AGG | + | chr7_2:72853512-72853531 | None:intergenic | 50.0% | |
| GAAGCCATTTCAGCAGCACT+AGG | + | chr7_2:72853612-72853631 | None:intergenic | 50.0% | |
| TAGATGCATATGTGGGGGCA+TGG | - | chr7_2:72855297-72855316 | Msa1074840:CDS | 50.0% | |
| ! | CTAAGAGGCACACAACCAAC+AGG | - | chr7_2:72855348-72855367 | Msa1074840:CDS | 50.0% |
| ! | GGTAGCCTTAGCATTCCTGT+TGG | + | chr7_2:72855366-72855385 | None:intergenic | 50.0% |
| CCTGGTGCACAACAGTAACA+AGG | + | chr7_2:72855387-72855406 | None:intergenic | 50.0% | |
| CCTTGTTACTGTTGTGCACC+AGG | - | chr7_2:72855384-72855403 | Msa1074840:CDS | 50.0% | |
| ! | GGAAGTGGACATGCTGCTTA+TGG | - | chr7_2:72855645-72855664 | Msa1074840:CDS | 50.0% |
| ! | CATGCTGCTTATGGGTGTGA+TGG | - | chr7_2:72855654-72855673 | Msa1074840:CDS | 50.0% |
| !! | CTGAAGGAAGTAGTGGACGG+TGG | + | chr7_2:72853108-72853127 | None:intergenic | 55.0% |
| !!! | GGGTGGTGGTTTTGTGGAGA+AGG | + | chr7_2:72853312-72853331 | None:intergenic | 55.0% |
| GGTGGTGAAGAAAAGGGTGG+TGG | + | chr7_2:72853326-72853345 | None:intergenic | 55.0% | |
| AGACCTTCCTTGCACTGCCA+TGG | - | chr7_2:72853506-72853525 | Msa1074840:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 72853065 | 72855873 | 72853065 | ID=Msa1074840;Name=Msa1074840 |
| chr7_2 | mRNA | 72853065 | 72855873 | 72853065 | ID=Msa1074840-mRNA-1;Parent=Msa1074840;Name=Msa1074840-mRNA-1;_AED=0.04;_eAED=0.04;_QI=157|1|1|1|1|1|2|145|348 |
| chr7_2 | exon | 72853065 | 72853638 | 72853065 | ID=Msa1074840-mRNA-1:exon:16836;Parent=Msa1074840-mRNA-1 |
| chr7_2 | exon | 72855099 | 72855873 | 72855099 | ID=Msa1074840-mRNA-1:exon:16835;Parent=Msa1074840-mRNA-1 |
| chr7_2 | five_prime_UTR | 72855717 | 72855873 | 72855717 | ID=Msa1074840-mRNA-1:five_prime_utr;Parent=Msa1074840-mRNA-1 |
| chr7_2 | CDS | 72855099 | 72855716 | 72855099 | ID=Msa1074840-mRNA-1:cds;Parent=Msa1074840-mRNA-1 |
| chr7_2 | CDS | 72853210 | 72853638 | 72853210 | ID=Msa1074840-mRNA-1:cds;Parent=Msa1074840-mRNA-1 |
| chr7_2 | three_prime_UTR | 72853065 | 72853209 | 72853065 | ID=Msa1074840-mRNA-1:three_prime_utr;Parent=Msa1074840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
