Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115730 | XP_024625805.1 | 97.989 | 348 | 6 | 1 | 1 | 348 | 1 | 347 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115730 | sp|Q9SVY1|ZWIP2_ARATH | 61.558 | 385 | 97 | 8 | 4 | 348 | 3 | 376 | 4.90e-139 | 402 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115730 | A0A396H3I2 | 97.989 | 348 | 6 | 1 | 1 | 348 | 1 | 347 | 0.0 | 712 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1115730 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1074840 | Msa1115730 | 0.871143 | 8.555066e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115730 | MtrunA17_Chr7g0258011 | 97.989 | 348 | 6 | 1 | 1 | 348 | 1 | 347 | 0.0 | 712 |
| Msa1115730 | MtrunA17_Chr1g0173841 | 72.848 | 302 | 56 | 6 | 66 | 348 | 92 | 386 | 1.52e-155 | 442 |
| Msa1115730 | MtrunA17_Chr8g0352011 | 62.759 | 290 | 91 | 4 | 66 | 346 | 54 | 335 | 2.10e-128 | 371 |
| Msa1115730 | MtrunA17_Chr2g0328921 | 65.734 | 286 | 76 | 5 | 67 | 348 | 44 | 311 | 3.84e-128 | 369 |
| Msa1115730 | MtrunA17_Chr2g0321291 | 61.538 | 247 | 82 | 4 | 103 | 348 | 71 | 305 | 6.17e-108 | 318 |
| Msa1115730 | MtrunA17_Chr5g0422571 | 66.968 | 221 | 49 | 4 | 119 | 337 | 64 | 262 | 5.02e-103 | 305 |
| Msa1115730 | MtrunA17_Chr4g0026521 | 75.000 | 176 | 41 | 1 | 174 | 346 | 115 | 290 | 1.59e-100 | 298 |
| Msa1115730 | MtrunA17_Chr1g0198651 | 74.419 | 172 | 41 | 1 | 174 | 342 | 99 | 270 | 9.05e-96 | 286 |
| Msa1115730 | MtrunA17_Chr4g0053341 | 64.286 | 210 | 51 | 3 | 119 | 328 | 40 | 225 | 4.14e-92 | 275 |
| Msa1115730 | MtrunA17_Chr1g0200421 | 38.000 | 150 | 83 | 5 | 184 | 326 | 245 | 391 | 4.09e-24 | 102 |
| Msa1115730 | MtrunA17_Chr1g0181381 | 32.558 | 172 | 99 | 5 | 177 | 347 | 54 | 209 | 1.23e-21 | 95.9 |
| Msa1115730 | MtrunA17_Chr2g0320341 | 36.242 | 149 | 88 | 3 | 184 | 325 | 238 | 386 | 3.01e-21 | 94.0 |
| Msa1115730 | MtrunA17_Chr4g0029521 | 33.540 | 161 | 90 | 5 | 184 | 343 | 61 | 205 | 3.92e-21 | 94.4 |
| Msa1115730 | MtrunA17_Chr1g0151351 | 33.129 | 163 | 92 | 5 | 182 | 343 | 62 | 208 | 6.82e-20 | 90.5 |
| Msa1115730 | MtrunA17_Chr7g0268961 | 31.977 | 172 | 93 | 6 | 178 | 342 | 33 | 187 | 7.39e-20 | 90.5 |
| Msa1115730 | MtrunA17_Chr1g0191991 | 33.540 | 161 | 87 | 6 | 184 | 342 | 86 | 228 | 8.58e-20 | 90.5 |
| Msa1115730 | MtrunA17_Chr1g0185121 | 33.974 | 156 | 86 | 5 | 182 | 336 | 61 | 200 | 1.02e-19 | 89.7 |
| Msa1115730 | MtrunA17_Chr2g0326381 | 35.971 | 139 | 80 | 4 | 184 | 321 | 55 | 185 | 1.12e-19 | 89.4 |
| Msa1115730 | MtrunA17_Chr1g0199101 | 33.333 | 162 | 88 | 7 | 177 | 336 | 63 | 206 | 2.67e-19 | 89.0 |
| Msa1115730 | MtrunA17_Chr7g0263941 | 33.540 | 161 | 89 | 6 | 177 | 336 | 50 | 193 | 2.85e-19 | 88.2 |
| Msa1115730 | MtrunA17_Chr1g0210821 | 32.919 | 161 | 90 | 6 | 177 | 336 | 60 | 203 | 3.66e-19 | 88.6 |
| Msa1115730 | MtrunA17_Chr8g0342421 | 32.278 | 158 | 89 | 5 | 184 | 340 | 85 | 225 | 3.97e-19 | 88.2 |
| Msa1115730 | MtrunA17_Chr1g0162971 | 34.416 | 154 | 83 | 6 | 184 | 336 | 64 | 200 | 4.90e-19 | 87.8 |
| Msa1115730 | MtrunA17_Chr2g0330171 | 31.677 | 161 | 92 | 5 | 177 | 336 | 62 | 205 | 8.85e-19 | 87.0 |
| Msa1115730 | MtrunA17_Chr4g0040571 | 30.233 | 172 | 102 | 5 | 177 | 347 | 55 | 209 | 1.05e-18 | 87.0 |
| Msa1115730 | MtrunA17_Chr1g0163001 | 32.716 | 162 | 91 | 6 | 177 | 337 | 59 | 203 | 1.52e-18 | 86.7 |
| Msa1115730 | MtrunA17_Chr8g0373541 | 33.548 | 155 | 85 | 6 | 184 | 337 | 56 | 193 | 2.59e-18 | 85.9 |
| Msa1115730 | MtrunA17_Chr8g0382121 | 36.429 | 140 | 82 | 6 | 192 | 326 | 127 | 264 | 1.40e-17 | 82.4 |
| Msa1115730 | MtrunA17_Chr3g0123941 | 35.404 | 161 | 94 | 7 | 192 | 348 | 139 | 293 | 3.23e-17 | 81.6 |
| Msa1115730 | MtrunA17_Chr2g0324991 | 35.211 | 142 | 82 | 6 | 177 | 316 | 8 | 141 | 1.72e-16 | 75.9 |
| Msa1115730 | MtrunA17_Chr3g0141431 | 32.117 | 137 | 85 | 3 | 182 | 317 | 43 | 172 | 2.78e-16 | 79.3 |
| Msa1115730 | MtrunA17_Chr8g0375521 | 30.282 | 142 | 88 | 5 | 182 | 320 | 48 | 181 | 4.20e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115730 | AT3G57670.1 | 61.558 | 385 | 97 | 8 | 4 | 348 | 3 | 376 | 4.98e-140 | 402 |
| Msa1115730 | AT1G51220.1 | 54.444 | 360 | 126 | 8 | 1 | 345 | 1 | 337 | 4.65e-123 | 357 |
| Msa1115730 | AT3G20880.1 | 56.615 | 325 | 108 | 8 | 45 | 345 | 95 | 410 | 6.03e-118 | 347 |
| Msa1115730 | AT1G13290.1 | 68.396 | 212 | 41 | 4 | 119 | 328 | 54 | 241 | 5.24e-101 | 300 |
| Msa1115730 | AT1G34790.1 | 63.717 | 226 | 73 | 1 | 119 | 344 | 83 | 299 | 1.67e-99 | 296 |
| Msa1115730 | AT1G08290.1 | 74.556 | 169 | 39 | 2 | 174 | 338 | 164 | 332 | 1.46e-94 | 285 |
| Msa1115730 | AT1G34370.3 | 38.158 | 152 | 82 | 5 | 184 | 326 | 28 | 176 | 4.74e-25 | 103 |
| Msa1115730 | AT1G34370.2 | 38.158 | 152 | 82 | 5 | 184 | 326 | 238 | 386 | 1.54e-24 | 104 |
| Msa1115730 | AT1G34370.1 | 38.158 | 152 | 82 | 5 | 184 | 326 | 238 | 386 | 1.54e-24 | 104 |
| Msa1115730 | AT5G22890.1 | 39.103 | 156 | 82 | 6 | 184 | 329 | 211 | 363 | 3.70e-22 | 96.7 |
| Msa1115730 | AT5G03150.1 | 33.333 | 165 | 93 | 5 | 184 | 347 | 76 | 224 | 6.88e-22 | 97.1 |
| Msa1115730 | AT1G55110.3 | 34.783 | 161 | 86 | 6 | 182 | 340 | 84 | 227 | 3.58e-20 | 91.7 |
| Msa1115730 | AT1G55110.1 | 34.783 | 161 | 86 | 6 | 182 | 340 | 84 | 227 | 3.58e-20 | 91.7 |
| Msa1115730 | AT1G55110.2 | 34.783 | 161 | 86 | 6 | 182 | 340 | 84 | 227 | 3.58e-20 | 91.7 |
| Msa1115730 | AT3G45260.2 | 35.065 | 154 | 83 | 5 | 184 | 336 | 62 | 199 | 2.56e-19 | 89.0 |
| Msa1115730 | AT3G45260.1 | 35.065 | 154 | 83 | 5 | 184 | 336 | 62 | 199 | 2.56e-19 | 89.0 |
| Msa1115730 | AT5G66730.1 | 33.974 | 156 | 85 | 6 | 182 | 336 | 53 | 191 | 2.97e-19 | 89.0 |
| Msa1115730 | AT2G02070.2 | 32.919 | 161 | 90 | 5 | 177 | 336 | 68 | 211 | 4.59e-19 | 89.0 |
| Msa1115730 | AT2G02070.1 | 32.919 | 161 | 90 | 5 | 177 | 336 | 68 | 211 | 4.59e-19 | 89.0 |
| Msa1115730 | AT2G02080.1 | 33.333 | 156 | 86 | 5 | 182 | 336 | 75 | 213 | 7.91e-19 | 87.8 |
| Msa1115730 | AT2G02080.4 | 33.333 | 156 | 86 | 5 | 182 | 336 | 75 | 213 | 7.91e-19 | 87.8 |
| Msa1115730 | AT2G02080.5 | 33.333 | 156 | 86 | 5 | 182 | 336 | 75 | 213 | 7.91e-19 | 87.8 |
| Msa1115730 | AT2G02080.3 | 33.333 | 156 | 86 | 5 | 182 | 336 | 75 | 213 | 7.91e-19 | 87.8 |
| Msa1115730 | AT5G44160.2 | 31.515 | 165 | 95 | 5 | 184 | 347 | 21 | 168 | 9.53e-19 | 87.4 |
| Msa1115730 | AT5G44160.1 | 31.515 | 165 | 95 | 5 | 184 | 347 | 60 | 207 | 1.03e-18 | 87.4 |
| Msa1115730 | AT5G60470.1 | 33.117 | 154 | 86 | 5 | 184 | 336 | 58 | 195 | 1.27e-18 | 87.0 |
| Msa1115730 | AT5G60470.3 | 33.117 | 154 | 86 | 5 | 184 | 336 | 63 | 200 | 1.29e-18 | 87.0 |
| Msa1115730 | AT5G60470.2 | 33.117 | 154 | 86 | 5 | 184 | 336 | 67 | 204 | 1.38e-18 | 87.0 |
| Msa1115730 | AT4G02670.2 | 32.298 | 161 | 92 | 4 | 177 | 336 | 71 | 215 | 1.74e-18 | 86.3 |
| Msa1115730 | AT4G02670.1 | 32.298 | 161 | 92 | 4 | 177 | 336 | 69 | 213 | 1.80e-18 | 86.3 |
| Msa1115730 | AT1G14580.1 | 33.333 | 162 | 88 | 6 | 177 | 336 | 69 | 212 | 1.94e-18 | 86.7 |
| Msa1115730 | AT1G14580.2 | 33.333 | 162 | 88 | 6 | 177 | 336 | 69 | 212 | 1.94e-18 | 86.7 |
| Msa1115730 | AT1G14580.3 | 33.333 | 162 | 88 | 6 | 177 | 336 | 83 | 226 | 2.43e-18 | 86.3 |
| Msa1115730 | AT1G03840.2 | 32.298 | 161 | 91 | 6 | 177 | 336 | 55 | 198 | 2.79e-18 | 86.3 |
| Msa1115730 | AT1G03840.1 | 31.056 | 161 | 93 | 5 | 177 | 336 | 57 | 200 | 2.88e-18 | 86.3 |
| Msa1115730 | AT3G50700.1 | 32.484 | 157 | 88 | 6 | 182 | 337 | 55 | 194 | 3.76e-18 | 85.5 |
| Msa1115730 | AT2G02080.6 | 33.987 | 153 | 83 | 5 | 185 | 336 | 1 | 136 | 4.33e-18 | 85.5 |
| Msa1115730 | AT2G02080.2 | 33.987 | 153 | 83 | 5 | 185 | 336 | 1 | 136 | 4.33e-18 | 85.5 |
| Msa1115730 | AT3G13810.5 | 31.677 | 161 | 93 | 5 | 177 | 336 | 81 | 225 | 1.05e-17 | 84.3 |
| Msa1115730 | AT3G13810.4 | 31.677 | 161 | 93 | 5 | 177 | 336 | 86 | 230 | 1.09e-17 | 84.3 |
| Msa1115730 | AT3G13810.1 | 31.677 | 161 | 93 | 5 | 177 | 336 | 86 | 230 | 1.09e-17 | 84.3 |
| Msa1115730 | AT3G13810.6 | 31.677 | 161 | 93 | 5 | 177 | 336 | 67 | 211 | 1.21e-17 | 84.3 |
| Msa1115730 | AT3G13810.2 | 31.677 | 161 | 93 | 5 | 177 | 336 | 87 | 231 | 1.22e-17 | 84.3 |
| Msa1115730 | AT3G13810.3 | 31.677 | 161 | 93 | 5 | 177 | 336 | 73 | 217 | 1.41e-17 | 84.0 |
| Msa1115730 | AT1G25250.1 | 28.261 | 138 | 91 | 4 | 182 | 317 | 31 | 162 | 2.77e-12 | 67.4 |
| Msa1115730 | AT1G25250.3 | 28.261 | 138 | 91 | 4 | 182 | 317 | 54 | 185 | 2.89e-12 | 67.8 |
| Msa1115730 | AT1G68130.1 | 29.710 | 138 | 88 | 4 | 182 | 317 | 62 | 192 | 6.50e-12 | 66.6 |
Find 85 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCAATTAATTAGTTTAAA+TGG | 0.155787 | 7_3:+63223272 | Msa1115730:three_prime_UTR |
| TTCCATTTAAACTAATTAAT+TGG | 0.202295 | 7_3:-63223274 | None:intergenic |
| GATCAAGTGGGAACAGTTTA+TGG | 0.228592 | 7_3:-63220656 | None:intergenic |
| CAGGATTCATGGTTAATAAT+AGG | 0.242177 | 7_3:+63221183 | Msa1115730:CDS |
| AAAGATCATATCAAAGCTTT+TGG | 0.279015 | 7_3:+63223115 | Msa1115730:CDS |
| TGTGTGCCTCTTAGAGATTC+AGG | 0.280812 | 7_3:-63222830 | None:intergenic |
| GGAAGTGGACATGCTGCTTA+TGG | 0.286552 | 7_3:+63223136 | Msa1115730:CDS |
| AGCAAATGTTCCAACATAAA+AGG | 0.288527 | 7_3:-63223320 | None:intergenic |
| GTTGGTGAGGATTCTTGTTC+AGG | 0.320459 | 7_3:+63221164 | Msa1115730:CDS |
| AAAAGAATTGTGGGAAGCTT+TGG | 0.349652 | 7_3:+63223050 | Msa1115730:CDS |
| GAAGAGAAAAGATTAGAGTA+AGG | 0.352738 | 7_3:-63220711 | None:intergenic |
| GGATTCTTGTTCAGGATTCA+TGG | 0.360583 | 7_3:+63221172 | Msa1115730:CDS |
| ATGATGATGATAGTGGAAAA+AGG | 0.364911 | 7_3:-63220841 | None:intergenic |
| AAACCCTAGTGCTGCTGAAA+TGG | 0.370039 | 7_3:+63221082 | Msa1115730:CDS |
| GGCTTAACAAAGGACAATAT+TGG | 0.383450 | 7_3:+63221204 | Msa1115730:CDS |
| AGAGGTAGTTCTTCTCTTAG+AGG | 0.403255 | 7_3:-63220891 | None:intergenic |
| ACTCCTTCTCAGATTCTCAT+TGG | 0.410986 | 7_3:+63221233 | Msa1115730:CDS |
| CCTTGTTACTGTTGTGCACC+AGG | 0.417618 | 7_3:+63222875 | Msa1115730:CDS |
| TCTTTGAGAGGCTTTGCTCT+TGG | 0.418075 | 7_3:-63222920 | None:intergenic |
| GAAGTGGACATGCTGCTTAT+GGG | 0.418215 | 7_3:+63223137 | Msa1115730:CDS |
| ATTTCAGCAGCACTAGGGTT+TGG | 0.419339 | 7_3:-63221080 | None:intergenic |
| GATCTCTGAGGAGTTATTAG+AGG | 0.433036 | 7_3:-63221120 | None:intergenic |
| GAAGGGTTTGAATTTGAAGA+TGG | 0.443053 | 7_3:-63220768 | None:intergenic |
| AGGAAATATGATGATGATAG+TGG | 0.447261 | 7_3:-63220848 | None:intergenic |
| TTCCCTTTCTTCTAAATCCA+TGG | 0.448360 | 7_3:-63221000 | None:intergenic |
| ATTAATTAGTTTAAATGGAA+AGG | 0.455213 | 7_3:+63223277 | Msa1115730:three_prime_UTR |
| AGACCTTCCTTGCACTGCCA+TGG | 0.468218 | 7_3:+63220983 | Msa1115730:CDS |
| TGCCATGGATTTAGAAGAAA+GGG | 0.480220 | 7_3:+63220998 | Msa1115730:CDS |
| TCTTGCTCTACTTCAGAAGC+TGG | 0.480582 | 7_3:-63223187 | None:intergenic |
| AGGAGAAGGTGGTGAAGAAG+AGG | 0.481051 | 7_3:-63220868 | None:intergenic |
| CTAAGAGGCACACAACCAAC+AGG | 0.487480 | 7_3:+63222839 | Msa1115730:CDS |
| TTGTTGTGGTGGTGAAGAAA+AGG | 0.494029 | 7_3:-63220807 | None:intergenic |
| GAAGCCATTTCAGCAGCACT+AGG | 0.500052 | 7_3:-63221086 | None:intergenic |
| TCTTCTCTTAGAGGAGGAGA+AGG | 0.501187 | 7_3:-63220882 | None:intergenic |
| AAGAGAAAAGATTAGAGTAA+GGG | 0.501589 | 7_3:-63220710 | None:intergenic |
| GAACTCATGAAAAGAATTGT+GGG | 0.503233 | 7_3:+63223041 | Msa1115730:CDS |
| AGAACTCATGAAAAGAATTG+TGG | 0.519976 | 7_3:+63223040 | Msa1115730:CDS |
| TCAATGTTGTTTCTCCATCC+TGG | 0.521236 | 7_3:-63222893 | None:intergenic |
| TTAGAAGAAAGGGAAGAAGA+TGG | 0.524706 | 7_3:+63221008 | Msa1115730:CDS |
| TTTATGTTGGAACATTTGCT+AGG | 0.525943 | 7_3:+63223323 | Msa1115730:three_prime_UTR |
| GTTACTGTTGCACTTCACAT+AGG | 0.528079 | 7_3:+63221053 | Msa1115730:CDS |
| ATGAGAATCTGAGAAGGAGT+AGG | 0.530035 | 7_3:-63221230 | None:intergenic |
| TGTTGTGGTGGTGAAGAAAA+GGG | 0.533983 | 7_3:-63220806 | None:intergenic |
| CATGCTGCTTATGGGTGTGA+TGG | 0.534441 | 7_3:+63223145 | Msa1115730:CDS |
| GTTGGAATTAGGCTTAAAAG+AGG | 0.534675 | 7_3:-63220909 | None:intergenic |
| CATGGATCACAGTACAGAAA+AGG | 0.538411 | 7_3:+63222806 | Msa1115730:CDS |
| CTGCCATGGATTTAGAAGAA+AGG | 0.539425 | 7_3:+63220997 | Msa1115730:CDS |
| AATCCATGGCAGTGCAAGGA+AGG | 0.544023 | 7_3:-63220986 | None:intergenic |
| AGGTATGGTTATTGTTGTTG+TGG | 0.546230 | 7_3:-63220821 | None:intergenic |
| CTCATCAAATAATATATCCA+TGG | 0.548772 | 7_3:+63220680 | Msa1115730:exon |
| GGTGGTGAAGAAAAGGGTGG+TGG | 0.550176 | 7_3:-63220800 | None:intergenic |
| TATGGTTATTGTTGTTGTGG+TGG | 0.558394 | 7_3:-63220818 | None:intergenic |
| AAGCTTTGGTATTGTATCTG+TGG | 0.559395 | 7_3:+63223064 | Msa1115730:CDS |
| ACACATTACAAGAGGAAACA+TGG | 0.569309 | 7_3:+63222959 | Msa1115730:CDS |
| ACAGGGCAAGAAAACTGAGT+TGG | 0.573007 | 7_3:-63221257 | None:intergenic |
| TGAGAATCTGAGAAGGAGTA+GGG | 0.575360 | 7_3:-63221229 | None:intergenic |
| AAAGGTCCTGAATCTCTAAG+AGG | 0.580235 | 7_3:+63222824 | Msa1115730:CDS |
| AGTGTTCTAAAATCTTTGAG+AGG | 0.584894 | 7_3:-63222932 | None:intergenic |
| AGAGTAAGGGTTATCAGCCA+TGG | 0.585920 | 7_3:-63220697 | None:intergenic |
| TCTCTTAGAGGAGGAGAAGG+TGG | 0.585932 | 7_3:-63220879 | None:intergenic |
| AGAGAGTACAAGATGGCTGA+AGG | 0.588675 | 7_3:-63220600 | None:intergenic |
| TTATTTGATGAGAGATCAAG+TGG | 0.593566 | 7_3:-63220669 | None:intergenic |
| GGTAGTTCTTCTCTTAGAGG+AGG | 0.595867 | 7_3:-63220888 | None:intergenic |
| CACTTCAAACACATTACAAG+AGG | 0.601250 | 7_3:+63222951 | Msa1115730:CDS |
| AAGCCATTTCAGCAGCACTA+GGG | 0.602433 | 7_3:-63221085 | None:intergenic |
| TCTAAATCCATGGCAGTGCA+AGG | 0.604858 | 7_3:-63220990 | None:intergenic |
| GGTAGCCTTAGCATTCCTGT+TGG | 0.607467 | 7_3:-63222854 | None:intergenic |
| CACAACCAACAGGAATGCTA+AGG | 0.612992 | 7_3:+63222849 | Msa1115730:CDS |
| AAGATGGCTGAAGGAAGTAG+TGG | 0.613233 | 7_3:-63220591 | None:intergenic |
| ATCACTGATAAAGAACATGT+TGG | 0.619011 | 7_3:+63221146 | Msa1115730:CDS |
| CAATAGATATAACAACATGC+AGG | 0.621278 | 7_3:+63221295 | Msa1115730:CDS |
| GGACCAATGAGAATCTGAGA+AGG | 0.626496 | 7_3:-63221236 | None:intergenic |
| GTTAATAATAGGCTTAACAA+AGG | 0.627528 | 7_3:+63221194 | Msa1115730:CDS |
| GTTACTGTTGTGCACCAGGA+TGG | 0.630807 | 7_3:+63222879 | Msa1115730:CDS |
| TGATAAAGAACATGTTGGTG+AGG | 0.633314 | 7_3:+63221151 | Msa1115730:CDS |
| AGATCAACAAGAACATGAGG+TGG | 0.635764 | 7_3:+63220953 | Msa1115730:CDS |
| CATGTGTAGAAAATGTAGCA+AGG | 0.640710 | 7_3:+63222994 | Msa1115730:CDS |
| CCTGGTGCACAACAGTAACA+AGG | 0.646997 | 7_3:-63222875 | None:intergenic |
| TGAAGATCAACAAGAACATG+AGG | 0.648021 | 7_3:+63220950 | Msa1115730:CDS |
| TGGCTGAAGGAAGTAGTGGA+CGG | 0.664653 | 7_3:-63220587 | None:intergenic |
| GTGTGATGGATTTGAAGAAG+AGG | 0.666362 | 7_3:+63223159 | Msa1115730:CDS |
| TGTGGTGGTGAAGAAAAGGG+TGG | 0.675317 | 7_3:-63220803 | None:intergenic |
| CTGAAGGAAGTAGTGGACGG+TGG | 0.680102 | 7_3:-63220584 | None:intergenic |
| ATCAGTGATAGTGATCTCTG+AGG | 0.722446 | 7_3:-63221132 | None:intergenic |
| TATTTGATGAGAGATCAAGT+GGG | 0.793929 | 7_3:-63220668 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTGTTTTATATATATTAATT+TGG | + | chr7_3:63221785-63221804 | Msa1115730:intron | 10.0% |
| !!! | TATTTTTAAAATTACAGTTT+TGG | + | chr7_3:63222319-63222338 | Msa1115730:intron | 10.0% |
| !! | AAAATAAAATTGATTACTAA+GGG | - | chr7_3:63222451-63222470 | None:intergenic | 10.0% |
| !! | AAAAATAAAATTGATTACTA+AGG | - | chr7_3:63222452-63222471 | None:intergenic | 10.0% |
| !!! | TTTTAAACCTTGAATTATAA+AGG | - | chr7_3:63221401-63221420 | None:intergenic | 15.0% |
| !! | ATAGCATATATTAATTTCAT+TGG | + | chr7_3:63221704-63221723 | Msa1115730:intron | 15.0% |
| !!! | TACCAATTAATTAGTTTAAA+TGG | + | chr7_3:63223272-63223291 | Msa1115730:three_prime_UTR | 15.0% |
| !! | TTCCATTTAAACTAATTAAT+TGG | - | chr7_3:63223277-63223296 | None:intergenic | 15.0% |
| !!! | ATTAATTAGTTTAAATGGAA+AGG | + | chr7_3:63223277-63223296 | Msa1115730:three_prime_UTR | 15.0% |
| !! | AATTTGAAGATGGAAAAATA+TGG | - | chr7_3:63220761-63220780 | None:intergenic | 20.0% |
| !!! | TCATATTTTTCTTGTTTTGT+TGG | - | chr7_3:63220930-63220949 | None:intergenic | 20.0% |
| !!! | AAAAATTTTCTGTTCTATAC+AGG | - | chr7_3:63221981-63222000 | None:intergenic | 20.0% |
| !!! | ATTTATTTTAATGATCGATC+AGG | - | chr7_3:63222015-63222034 | None:intergenic | 20.0% |
| !! | ATTAAACTATGGAAAAAAGA+AGG | - | chr7_3:63222108-63222127 | None:intergenic | 20.0% |
| !! | AATTTAGAGATAGAAAAATG+TGG | + | chr7_3:63222203-63222222 | Msa1115730:intron | 20.0% |
| !!! | AAAAACTAAAGAAGAGTTTT+TGG | - | chr7_3:63222280-63222299 | None:intergenic | 20.0% |
| !!! | TGTCTTCAATTTTTTAGTTT+TGG | + | chr7_3:63222346-63222365 | Msa1115730:intron | 20.0% |
| !!! | GTCTTCAATTTTTTAGTTTT+GGG | + | chr7_3:63222347-63222366 | Msa1115730:intron | 20.0% |
| !! | TTTCAAAAACTATTTCAAAC+AGG | + | chr7_3:63222425-63222444 | Msa1115730:intron | 20.0% |
| !! | TATTAATGTACAATCATGAA+GGG | - | chr7_3:63222557-63222576 | None:intergenic | 20.0% |
| !! | TTATTAATGTACAATCATGA+AGG | - | chr7_3:63222558-63222577 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTTCCTTTTATGT+TGG | + | chr7_3:63223310-63223329 | Msa1115730:three_prime_UTR | 20.0% |
| ! | CTCATCAAATAATATATCCA+TGG | + | chr7_3:63220680-63220699 | Msa1115730:exon | 25.0% |
| ! | AAGAGAAAAGATTAGAGTAA+GGG | - | chr7_3:63220713-63220732 | None:intergenic | 25.0% |
| ! | ATGGAAAAATATGGTTGAAT+TGG | - | chr7_3:63220752-63220771 | None:intergenic | 25.0% |
| !!! | TTTCTTGTTTTGTTGGAATT+AGG | - | chr7_3:63220923-63220942 | None:intergenic | 25.0% |
| ! | GTTAATAATAGGCTTAACAA+AGG | + | chr7_3:63221194-63221213 | Msa1115730:CDS | 25.0% |
| ! | AGAAAGTTATTGACAGAAAA+GGG | - | chr7_3:63221462-63221481 | None:intergenic | 25.0% |
| ! | AAGAAAGTTATTGACAGAAA+AGG | - | chr7_3:63221463-63221482 | None:intergenic | 25.0% |
| ! | CAAAAAGAAAGAAATGAAAG+AGG | - | chr7_3:63221574-63221593 | None:intergenic | 25.0% |
| !! | TTCTGAAGAAAGAAAAAAGA+AGG | - | chr7_3:63221658-63221677 | None:intergenic | 25.0% |
| ! | AGTTTAGTCAATCAAAGAAA+AGG | - | chr7_3:63221890-63221909 | None:intergenic | 25.0% |
| ! | TAAAAAATTGTTCCTCTTTG+TGG | + | chr7_3:63222038-63222057 | Msa1115730:intron | 25.0% |
| !! | TTCAGTAGATCTTGATAATA+AGG | - | chr7_3:63222628-63222647 | None:intergenic | 25.0% |
| !!! | TGTTTTTATAGATGCATATG+TGG | + | chr7_3:63222780-63222799 | Msa1115730:intron | 25.0% |
| !! | GTTTTTATAGATGCATATGT+GGG | + | chr7_3:63222781-63222800 | Msa1115730:intron | 25.0% |
| !! | TTTTTATAGATGCATATGTG+GGG | + | chr7_3:63222782-63222801 | Msa1115730:intron | 25.0% |
| !! | AAAGATCATATCAAAGCTTT+TGG | + | chr7_3:63223115-63223134 | Msa1115730:CDS | 25.0% |
| TATTTGATGAGAGATCAAGT+GGG | - | chr7_3:63220671-63220690 | None:intergenic | 30.0% | |
| TTATTTGATGAGAGATCAAG+TGG | - | chr7_3:63220672-63220691 | None:intergenic | 30.0% | |
| GAAGAGAAAAGATTAGAGTA+AGG | - | chr7_3:63220714-63220733 | None:intergenic | 30.0% | |
| !! | ATGATGATGATAGTGGAAAA+AGG | - | chr7_3:63220844-63220863 | None:intergenic | 30.0% |
| ! | AGGAAATATGATGATGATAG+TGG | - | chr7_3:63220851-63220870 | None:intergenic | 30.0% |
| ATCACTGATAAAGAACATGT+TGG | + | chr7_3:63221146-63221165 | Msa1115730:CDS | 30.0% | |
| CAGGATTCATGGTTAATAAT+AGG | + | chr7_3:63221183-63221202 | Msa1115730:CDS | 30.0% | |
| !!! | TGAAAGTTTTAGAGCAAACA+GGG | - | chr7_3:63221277-63221296 | None:intergenic | 30.0% |
| !!! | TTGAAAGTTTTAGAGCAAAC+AGG | - | chr7_3:63221278-63221297 | None:intergenic | 30.0% |
| CAATAGATATAACAACATGC+AGG | + | chr7_3:63221295-63221314 | Msa1115730:CDS | 30.0% | |
| ! | AAACAGAAGAACAAGGTATT+TGG | - | chr7_3:63221359-63221378 | None:intergenic | 30.0% |
| TGAAACAAAACAGAAGAACA+AGG | - | chr7_3:63221366-63221385 | None:intergenic | 30.0% | |
| CACACTTCCTTTATAATTCA+AGG | + | chr7_3:63221391-63221410 | Msa1115730:intron | 30.0% | |
| ! | TCCTTGATTTGAACCATTAA+CGG | + | chr7_3:63221482-63221501 | Msa1115730:intron | 30.0% |
| GAAAGAAAAAAGAAGGAAAG+AGG | - | chr7_3:63221651-63221670 | None:intergenic | 30.0% | |
| ! | AGCTAGTGTTAAATTTTGCA+TGG | + | chr7_3:63221763-63221782 | Msa1115730:intron | 30.0% |
| TCTCTCAGTATATATGAATC+AGG | - | chr7_3:63221840-63221859 | None:intergenic | 30.0% | |
| ATTCATATATACTGAGAGAC+TGG | + | chr7_3:63221841-63221860 | Msa1115730:intron | 30.0% | |
| TTCATATATACTGAGAGACT+GGG | + | chr7_3:63221842-63221861 | Msa1115730:intron | 30.0% | |
| AGTCAATCAAAGAAAAGGAA+AGG | - | chr7_3:63221885-63221904 | None:intergenic | 30.0% | |
| ! | TCAATGTAGTAAAAGGCATA+AGG | - | chr7_3:63221927-63221946 | None:intergenic | 30.0% |
| ACAGACTTCAATGTAGTAAA+AGG | - | chr7_3:63221934-63221953 | None:intergenic | 30.0% | |
| ! | ATTTTCTGTTCTATACAGGT+GGG | - | chr7_3:63221977-63221996 | None:intergenic | 30.0% |
| ! | AATTTTCTGTTCTATACAGG+TGG | - | chr7_3:63221978-63221997 | None:intergenic | 30.0% |
| ATTTGGATGGTATATTAGCA+TGG | - | chr7_3:63222082-63222101 | None:intergenic | 30.0% | |
| AAAAAGAAGGCAAATTTGGA+TGG | - | chr7_3:63222095-63222114 | None:intergenic | 30.0% | |
| TGGAAAAAAGAAGGCAAATT+TGG | - | chr7_3:63222099-63222118 | None:intergenic | 30.0% | |
| !!! | TTTTGGAAAGTGTTTCAAAC+AGG | - | chr7_3:63222263-63222282 | None:intergenic | 30.0% |
| AGAATAACCATCGTAAAAAG+AGG | + | chr7_3:63222393-63222412 | Msa1115730:intron | 30.0% | |
| TGAAGGGCAAAGATTTAATT+TGG | - | chr7_3:63222541-63222560 | None:intergenic | 30.0% | |
| ! | GTAGATCTTGATAATAAGGT+CGG | - | chr7_3:63222624-63222643 | None:intergenic | 30.0% |
| ! | TTTTATAGATGCATATGTGG+GGG | + | chr7_3:63222783-63222802 | Msa1115730:intron | 30.0% |
| !! | AGTGTTCTAAAATCTTTGAG+AGG | - | chr7_3:63222935-63222954 | None:intergenic | 30.0% |
| ! | CTACATTTTCTACACATGAA+TGG | - | chr7_3:63222992-63223011 | None:intergenic | 30.0% |
| AGAACTCATGAAAAGAATTG+TGG | + | chr7_3:63223040-63223059 | Msa1115730:CDS | 30.0% | |
| GAACTCATGAAAAGAATTGT+GGG | + | chr7_3:63223041-63223060 | Msa1115730:CDS | 30.0% | |
| ! | GTTCTGATTTTAAACACAAG+AGG | + | chr7_3:63223086-63223105 | Msa1115730:CDS | 30.0% |
| AGCAAATGTTCCAACATAAA+AGG | - | chr7_3:63223323-63223342 | None:intergenic | 30.0% | |
| TTTATGTTGGAACATTTGCT+AGG | + | chr7_3:63223323-63223342 | Msa1115730:three_prime_UTR | 30.0% | |
| GAAGGGTTTGAATTTGAAGA+TGG | - | chr7_3:63220771-63220790 | None:intergenic | 35.0% | |
| ! | TATGGTTATTGTTGTTGTGG+TGG | - | chr7_3:63220821-63220840 | None:intergenic | 35.0% |
| ! | AGGTATGGTTATTGTTGTTG+TGG | - | chr7_3:63220824-63220843 | None:intergenic | 35.0% |
| !! | GATGATAGTGGAAAAAGGTA+TGG | - | chr7_3:63220839-63220858 | None:intergenic | 35.0% |
| GTTGGAATTAGGCTTAAAAG+AGG | - | chr7_3:63220912-63220931 | None:intergenic | 35.0% | |
| TGAAGATCAACAAGAACATG+AGG | + | chr7_3:63220950-63220969 | Msa1115730:CDS | 35.0% | |
| TGCCATGGATTTAGAAGAAA+GGG | + | chr7_3:63220998-63221017 | Msa1115730:CDS | 35.0% | |
| TTCCCTTTCTTCTAAATCCA+TGG | - | chr7_3:63221003-63221022 | None:intergenic | 35.0% | |
| TTAGAAGAAAGGGAAGAAGA+TGG | + | chr7_3:63221008-63221027 | Msa1115730:CDS | 35.0% | |
| TGATAAAGAACATGTTGGTG+AGG | + | chr7_3:63221151-63221170 | Msa1115730:CDS | 35.0% | |
| GGCTTAACAAAGGACAATAT+TGG | + | chr7_3:63221204-63221223 | Msa1115730:CDS | 35.0% | |
| ACCGTTAATGGTTCAAATCA+AGG | - | chr7_3:63221486-63221505 | None:intergenic | 35.0% | |
| AAAAAGAAGGAAAGAGGTCA+AGG | - | chr7_3:63221645-63221664 | None:intergenic | 35.0% | |
| ! | GCTATAACTCTAGAAGAAAG+AGG | - | chr7_3:63221689-63221708 | None:intergenic | 35.0% |
| CAATCAAAGAAAAGGAAAGG+TGG | - | chr7_3:63221882-63221901 | None:intergenic | 35.0% | |
| GTATATTAGCATGGTTGGAT+TGG | - | chr7_3:63222073-63222092 | None:intergenic | 35.0% | |
| ! | TACAAGTCCTCTTTTTACGA+TGG | - | chr7_3:63222403-63222422 | None:intergenic | 35.0% |
| CACTTCAAACACATTACAAG+AGG | + | chr7_3:63222951-63222970 | Msa1115730:CDS | 35.0% | |
| ACACATTACAAGAGGAAACA+TGG | + | chr7_3:63222959-63222978 | Msa1115730:CDS | 35.0% | |
| CATGTGTAGAAAATGTAGCA+AGG | + | chr7_3:63222994-63223013 | Msa1115730:CDS | 35.0% | |
| AAAAGAATTGTGGGAAGCTT+TGG | + | chr7_3:63223050-63223069 | Msa1115730:CDS | 35.0% | |
| ! | AAGCTTTGGTATTGTATCTG+TGG | + | chr7_3:63223064-63223083 | Msa1115730:CDS | 35.0% |
| !! | CATATCAAAGCTTTTGGAAG+TGG | + | chr7_3:63223121-63223140 | Msa1115730:CDS | 35.0% |
| ! | TAGAGAGAGAGAGTACAAGA+TGG | - | chr7_3:63220610-63220629 | None:intergenic | 40.0% |
| GATCAAGTGGGAACAGTTTA+TGG | - | chr7_3:63220659-63220678 | None:intergenic | 40.0% | |
| ! | TGTTGTGGTGGTGAAGAAAA+GGG | - | chr7_3:63220809-63220828 | None:intergenic | 40.0% |
| ! | TTGTTGTGGTGGTGAAGAAA+AGG | - | chr7_3:63220810-63220829 | None:intergenic | 40.0% |
| AGAGGTAGTTCTTCTCTTAG+AGG | - | chr7_3:63220894-63220913 | None:intergenic | 40.0% | |
| AGATCAACAAGAACATGAGG+TGG | + | chr7_3:63220953-63220972 | Msa1115730:CDS | 40.0% | |
| CTGCCATGGATTTAGAAGAA+AGG | + | chr7_3:63220997-63221016 | Msa1115730:CDS | 40.0% | |
| GTTACTGTTGCACTTCACAT+AGG | + | chr7_3:63221053-63221072 | Msa1115730:CDS | 40.0% | |
| ! | GATCTCTGAGGAGTTATTAG+AGG | - | chr7_3:63221123-63221142 | None:intergenic | 40.0% |
| ! | ATCAGTGATAGTGATCTCTG+AGG | - | chr7_3:63221135-63221154 | None:intergenic | 40.0% |
| GGATTCTTGTTCAGGATTCA+TGG | + | chr7_3:63221172-63221191 | Msa1115730:CDS | 40.0% | |
| TGAGAATCTGAGAAGGAGTA+GGG | - | chr7_3:63221232-63221251 | None:intergenic | 40.0% | |
| ATGAGAATCTGAGAAGGAGT+AGG | - | chr7_3:63221233-63221252 | None:intergenic | 40.0% | |
| ACTCCTTCTCAGATTCTCAT+TGG | + | chr7_3:63221233-63221252 | Msa1115730:CDS | 40.0% | |
| AAGCATCAGAGAACCGTTAA+TGG | - | chr7_3:63221498-63221517 | None:intergenic | 40.0% | |
| ATTAACGGTTCTCTGATGCT+TGG | + | chr7_3:63221497-63221516 | Msa1115730:intron | 40.0% | |
| TCTGATGCTTGGATAGAAAG+AGG | + | chr7_3:63221508-63221527 | Msa1115730:intron | 40.0% | |
| AGAAAAGGAAAGGTGGAGTA+AGG | - | chr7_3:63221875-63221894 | None:intergenic | 40.0% | |
| GGATGGTATATTAGCATGGT+TGG | - | chr7_3:63222078-63222097 | None:intergenic | 40.0% | |
| CATGGATCACAGTACAGAAA+AGG | + | chr7_3:63222806-63222825 | Msa1115730:CDS | 40.0% | |
| AAAGGTCCTGAATCTCTAAG+AGG | + | chr7_3:63222824-63222843 | Msa1115730:CDS | 40.0% | |
| !! | TCAATGTTGTTTCTCCATCC+TGG | - | chr7_3:63222896-63222915 | None:intergenic | 40.0% |
| !!! | CTTTTGCTGTTAGAGGAGAT+TGG | + | chr7_3:63223017-63223036 | Msa1115730:CDS | 40.0% |
| !! | GTGTGATGGATTTGAAGAAG+AGG | + | chr7_3:63223159-63223178 | Msa1115730:CDS | 40.0% |
| AAGATGGCTGAAGGAAGTAG+TGG | - | chr7_3:63220594-63220613 | None:intergenic | 45.0% | |
| ! | AGAGAGTACAAGATGGCTGA+AGG | - | chr7_3:63220603-63220622 | None:intergenic | 45.0% |
| AGAGTAAGGGTTATCAGCCA+TGG | - | chr7_3:63220700-63220719 | None:intergenic | 45.0% | |
| !! | AGAAAAGGGTGGTGGTTTTG+TGG | - | chr7_3:63220795-63220814 | None:intergenic | 45.0% |
| TCTTCTCTTAGAGGAGGAGA+AGG | - | chr7_3:63220885-63220904 | None:intergenic | 45.0% | |
| GGTAGTTCTTCTCTTAGAGG+AGG | - | chr7_3:63220891-63220910 | None:intergenic | 45.0% | |
| TCTAAATCCATGGCAGTGCA+AGG | - | chr7_3:63220993-63221012 | None:intergenic | 45.0% | |
| ATTTCAGCAGCACTAGGGTT+TGG | - | chr7_3:63221083-63221102 | None:intergenic | 45.0% | |
| ! | AAACCCTAGTGCTGCTGAAA+TGG | + | chr7_3:63221082-63221101 | Msa1115730:CDS | 45.0% |
| AAGCCATTTCAGCAGCACTA+GGG | - | chr7_3:63221088-63221107 | None:intergenic | 45.0% | |
| ! | GTTGGTGAGGATTCTTGTTC+AGG | + | chr7_3:63221164-63221183 | Msa1115730:CDS | 45.0% |
| GGACCAATGAGAATCTGAGA+AGG | - | chr7_3:63221239-63221258 | None:intergenic | 45.0% | |
| ACAGGGCAAGAAAACTGAGT+TGG | - | chr7_3:63221260-63221279 | None:intergenic | 45.0% | |
| TGGACTAAGAAGCCACAAAG+AGG | - | chr7_3:63222053-63222072 | None:intergenic | 45.0% | |
| TGTGTGCCTCTTAGAGATTC+AGG | - | chr7_3:63222833-63222852 | None:intergenic | 45.0% | |
| CACAACCAACAGGAATGCTA+AGG | + | chr7_3:63222849-63222868 | Msa1115730:CDS | 45.0% | |
| ! | TCTTTGAGAGGCTTTGCTCT+TGG | - | chr7_3:63222923-63222942 | None:intergenic | 45.0% |
| !!! | AGCAAGGCTTTTGCTGTTAG+AGG | + | chr7_3:63223010-63223029 | Msa1115730:CDS | 45.0% |
| ! | GAAGTGGACATGCTGCTTAT+GGG | + | chr7_3:63223137-63223156 | Msa1115730:CDS | 45.0% |
| TCTTGCTCTACTTCAGAAGC+TGG | - | chr7_3:63223190-63223209 | None:intergenic | 45.0% | |
| !!! | TTTATTTTAAGAAATAATTT+TGG | + | chr7_3:63221737-63221756 | Msa1115730:intron | 5.0% |
| !!! | TTATTTTAAGAAATAATTTT+GGG | + | chr7_3:63221738-63221757 | Msa1115730:intron | 5.0% |
| !! | AATATAATTTAATTAAACTA+TGG | - | chr7_3:63222119-63222138 | None:intergenic | 5.0% |
| !!! | CAAAATAAATATTTTTATTT+TGG | - | chr7_3:63222669-63222688 | None:intergenic | 5.0% |
| ! | TGGCTGAAGGAAGTAGTGGA+CGG | - | chr7_3:63220590-63220609 | None:intergenic | 50.0% |
| !!! | GGTGGTGGTTTTGTGGAGAA+GGG | - | chr7_3:63220788-63220807 | None:intergenic | 50.0% |
| ! | TGTGGTGGTGAAGAAAAGGG+TGG | - | chr7_3:63220806-63220825 | None:intergenic | 50.0% |
| AGGAGAAGGTGGTGAAGAAG+AGG | - | chr7_3:63220871-63220890 | None:intergenic | 50.0% | |
| TCTCTTAGAGGAGGAGAAGG+TGG | - | chr7_3:63220882-63220901 | None:intergenic | 50.0% | |
| AATCCATGGCAGTGCAAGGA+AGG | - | chr7_3:63220989-63221008 | None:intergenic | 50.0% | |
| GAAGCCATTTCAGCAGCACT+AGG | - | chr7_3:63221089-63221108 | None:intergenic | 50.0% | |
| GGAAGCAGAAGCAGAAGCAA+TGG | - | chr7_3:63221441-63221460 | None:intergenic | 50.0% | |
| TAGATGCATATGTGGGGGCA+TGG | + | chr7_3:63222788-63222807 | Msa1115730:intron | 50.0% | |
| ! | CTAAGAGGCACACAACCAAC+AGG | + | chr7_3:63222839-63222858 | Msa1115730:CDS | 50.0% |
| ! | GGTAGCCTTAGCATTCCTGT+TGG | - | chr7_3:63222857-63222876 | None:intergenic | 50.0% |
| CCTGGTGCACAACAGTAACA+AGG | - | chr7_3:63222878-63222897 | None:intergenic | 50.0% | |
| CCTTGTTACTGTTGTGCACC+AGG | + | chr7_3:63222875-63222894 | Msa1115730:CDS | 50.0% | |
| GTTACTGTTGTGCACCAGGA+TGG | + | chr7_3:63222879-63222898 | Msa1115730:CDS | 50.0% | |
| ! | GGAAGTGGACATGCTGCTTA+TGG | + | chr7_3:63223136-63223155 | Msa1115730:CDS | 50.0% |
| ! | CATGCTGCTTATGGGTGTGA+TGG | + | chr7_3:63223145-63223164 | Msa1115730:CDS | 50.0% |
| !! | CTGAAGGAAGTAGTGGACGG+TGG | - | chr7_3:63220587-63220606 | None:intergenic | 55.0% |
| !!! | GGGTGGTGGTTTTGTGGAGA+AGG | - | chr7_3:63220789-63220808 | None:intergenic | 55.0% |
| GGTGGTGAAGAAAAGGGTGG+TGG | - | chr7_3:63220803-63220822 | None:intergenic | 55.0% | |
| AGACCTTCCTTGCACTGCCA+TGG | + | chr7_3:63220983-63221002 | Msa1115730:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 63220530 | 63223355 | 63220530 | ID=Msa1115730;Name=Msa1115730 |
| chr7_3 | mRNA | 63220530 | 63223355 | 63220530 | ID=Msa1115730-mRNA-1;Parent=Msa1115730;Name=Msa1115730-mRNA-1;_AED=0.04;_eAED=0.04;_QI=169|1|1|1|1|1|2|136|348 |
| chr7_3 | exon | 63220530 | 63221316 | 63220530 | ID=Msa1115730-mRNA-1:exon:14784;Parent=Msa1115730-mRNA-1 |
| chr7_3 | exon | 63222791 | 63223355 | 63222791 | ID=Msa1115730-mRNA-1:exon:14785;Parent=Msa1115730-mRNA-1 |
| chr7_3 | five_prime_UTR | 63220530 | 63220698 | 63220530 | ID=Msa1115730-mRNA-1:five_prime_utr;Parent=Msa1115730-mRNA-1 |
| chr7_3 | CDS | 63220699 | 63221316 | 63220699 | ID=Msa1115730-mRNA-1:cds;Parent=Msa1115730-mRNA-1 |
| chr7_3 | CDS | 63222791 | 63223219 | 63222791 | ID=Msa1115730-mRNA-1:cds;Parent=Msa1115730-mRNA-1 |
| chr7_3 | three_prime_UTR | 63223220 | 63223355 | 63223220 | ID=Msa1115730-mRNA-1:three_prime_utr;Parent=Msa1115730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
