Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075190 | XP_003625245.1 | 96.316 | 380 | 8 | 1 | 1 | 380 | 1 | 374 | 0.0 | 753 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075190 | sp|Q0WVU3|PHL5_ARATH | 55.042 | 238 | 91 | 6 | 149 | 382 | 120 | 345 | 7.85e-68 | 221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075190 | G7KVC1 | 96.316 | 380 | 8 | 1 | 1 | 380 | 1 | 374 | 0.0 | 753 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1075190 | TF | GARP-G2-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1035190 | Msa1075190 | 0.815065 | 1.118829e-51 | -8.615850e-47 |
| Msa1075190 | Msa1162520 | 0.856152 | 3.903815e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075190 | MtrunA17_Chr7g0258551 | 96.316 | 380 | 8 | 1 | 1 | 380 | 1 | 374 | 0.0 | 753 |
| Msa1075190 | MtrunA17_Chr1g0175091 | 61.560 | 359 | 114 | 8 | 31 | 379 | 78 | 422 | 1.67e-140 | 406 |
| Msa1075190 | MtrunA17_Chr7g0261911 | 53.012 | 166 | 77 | 1 | 207 | 371 | 251 | 416 | 1.12e-57 | 195 |
| Msa1075190 | MtrunA17_Chr1g0190301 | 57.042 | 142 | 60 | 1 | 209 | 349 | 166 | 307 | 3.64e-51 | 176 |
| Msa1075190 | MtrunA17_Chr7g0274471 | 53.147 | 143 | 66 | 1 | 217 | 358 | 217 | 359 | 1.08e-47 | 167 |
| Msa1075190 | MtrunA17_Chr2g0291021 | 51.724 | 145 | 67 | 2 | 218 | 359 | 49 | 193 | 2.37e-46 | 161 |
| Msa1075190 | MtrunA17_Chr7g0254981 | 48.592 | 142 | 69 | 1 | 216 | 353 | 48 | 189 | 9.28e-45 | 155 |
| Msa1075190 | MtrunA17_Chr6g0461641 | 45.395 | 152 | 64 | 3 | 217 | 350 | 41 | 191 | 1.12e-36 | 137 |
| Msa1075190 | MtrunA17_Chr7g0242521 | 46.809 | 141 | 71 | 2 | 205 | 342 | 1 | 140 | 4.04e-36 | 132 |
| Msa1075190 | MtrunA17_Chr2g0321461 | 44.767 | 172 | 71 | 5 | 201 | 349 | 27 | 197 | 1.61e-35 | 134 |
| Msa1075190 | MtrunA17_Chr1g0175071 | 50.350 | 143 | 70 | 1 | 207 | 348 | 165 | 307 | 3.41e-35 | 131 |
| Msa1075190 | MtrunA17_Chr1g0175081 | 63.529 | 85 | 31 | 0 | 198 | 282 | 2 | 86 | 2.24e-31 | 115 |
| Msa1075190 | MtrunA17_Chr5g0417521 | 34.395 | 157 | 90 | 1 | 217 | 360 | 14 | 170 | 3.26e-30 | 119 |
| Msa1075190 | MtrunA17_Chr5g0409731 | 41.781 | 146 | 72 | 4 | 218 | 350 | 25 | 170 | 3.85e-30 | 117 |
| Msa1075190 | MtrunA17_Chr8g0356501 | 40.816 | 147 | 77 | 4 | 211 | 349 | 28 | 172 | 3.44e-29 | 115 |
| Msa1075190 | MtrunA17_Chr4g0042451 | 36.054 | 147 | 78 | 2 | 217 | 349 | 16 | 160 | 1.09e-28 | 114 |
| Msa1075190 | MtrunA17_Chr2g0310011 | 40.000 | 155 | 83 | 4 | 211 | 357 | 26 | 178 | 5.19e-28 | 112 |
| Msa1075190 | MtrunA17_Chr2g0290991 | 37.888 | 161 | 86 | 3 | 218 | 365 | 39 | 198 | 1.23e-27 | 110 |
| Msa1075190 | MtrunA17_Chr1g0197171 | 33.889 | 180 | 98 | 4 | 218 | 382 | 44 | 217 | 1.24e-25 | 105 |
| Msa1075190 | MtrunA17_Chr7g0258531 | 43.056 | 144 | 78 | 2 | 208 | 349 | 203 | 344 | 3.23e-25 | 105 |
| Msa1075190 | MtrunA17_Chr3g0109981 | 48.837 | 86 | 41 | 2 | 220 | 303 | 276 | 360 | 4.37e-18 | 85.5 |
| Msa1075190 | MtrunA17_Chr7g0243081 | 49.367 | 79 | 39 | 1 | 214 | 292 | 67 | 144 | 7.61e-18 | 84.0 |
| Msa1075190 | MtrunA17_Chr8g0366281 | 54.412 | 68 | 29 | 1 | 220 | 285 | 175 | 242 | 1.49e-17 | 83.2 |
| Msa1075190 | MtrunA17_Chr2g0320231 | 47.059 | 102 | 40 | 3 | 214 | 302 | 93 | 193 | 2.40e-17 | 82.8 |
| Msa1075190 | MtrunA17_Chr8g0379121 | 56.452 | 62 | 27 | 0 | 214 | 275 | 107 | 168 | 5.35e-17 | 82.0 |
| Msa1075190 | MtrunA17_Chr2g0288601 | 53.846 | 65 | 30 | 0 | 204 | 268 | 57 | 121 | 3.85e-16 | 74.3 |
| Msa1075190 | MtrunA17_Chr6g0479431 | 60.000 | 55 | 22 | 0 | 220 | 274 | 204 | 258 | 3.91e-16 | 79.0 |
| Msa1075190 | MtrunA17_Chr1g0210911 | 50.000 | 78 | 35 | 2 | 201 | 274 | 1 | 78 | 4.49e-16 | 78.6 |
| Msa1075190 | MtrunA17_Chr5g0410741 | 60.000 | 55 | 22 | 0 | 220 | 274 | 221 | 275 | 5.95e-16 | 79.0 |
| Msa1075190 | MtrunA17_Chr3g0095611 | 55.932 | 59 | 26 | 0 | 216 | 274 | 17 | 75 | 6.01e-16 | 76.3 |
| Msa1075190 | MtrunA17_Chr1g0154261 | 53.968 | 63 | 29 | 0 | 220 | 282 | 128 | 190 | 8.20e-16 | 77.4 |
| Msa1075190 | MtrunA17_Chr1g0162931 | 55.738 | 61 | 27 | 0 | 214 | 274 | 14 | 74 | 1.12e-15 | 76.6 |
| Msa1075190 | MtrunA17_Chr2g0283951 | 51.515 | 66 | 28 | 1 | 214 | 275 | 85 | 150 | 8.30e-14 | 72.0 |
| Msa1075190 | MtrunA17_Chr7g0275401 | 55.000 | 60 | 26 | 1 | 212 | 271 | 186 | 244 | 8.81e-13 | 68.2 |
| Msa1075190 | MtrunA17_Chr4g0009901 | 51.786 | 56 | 26 | 1 | 216 | 271 | 166 | 220 | 5.28e-12 | 65.9 |
| Msa1075190 | MtrunA17_Chr4g0062921 | 49.231 | 65 | 33 | 0 | 207 | 271 | 224 | 288 | 8.96e-12 | 66.2 |
| Msa1075190 | MtrunA17_Chr1g0198601 | 37.755 | 98 | 46 | 1 | 202 | 284 | 180 | 277 | 3.06e-11 | 64.3 |
| Msa1075190 | MtrunA17_Chr4g0009981 | 46.774 | 62 | 32 | 1 | 210 | 271 | 108 | 168 | 6.75e-11 | 62.4 |
| Msa1075190 | MtrunA17_Chr5g0402631 | 53.571 | 56 | 26 | 0 | 216 | 271 | 212 | 267 | 8.99e-11 | 62.8 |
| Msa1075190 | MtrunA17_Chr4g0045361 | 50.877 | 57 | 28 | 0 | 215 | 271 | 271 | 327 | 9.00e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075190 | AT5G06800.1 | 55.042 | 238 | 91 | 6 | 149 | 382 | 120 | 345 | 7.98e-69 | 221 |
| Msa1075190 | AT5G06800.2 | 53.909 | 243 | 91 | 7 | 149 | 382 | 120 | 350 | 2.37e-66 | 215 |
| Msa1075190 | AT5G29000.1 | 53.947 | 152 | 66 | 1 | 205 | 352 | 175 | 326 | 1.55e-52 | 179 |
| Msa1075190 | AT5G29000.3 | 53.947 | 152 | 66 | 1 | 205 | 352 | 175 | 326 | 1.55e-52 | 179 |
| Msa1075190 | AT5G29000.2 | 53.947 | 152 | 66 | 1 | 205 | 352 | 218 | 369 | 2.89e-52 | 179 |
| Msa1075190 | AT3G04450.4 | 45.055 | 182 | 89 | 3 | 175 | 352 | 162 | 336 | 1.15e-49 | 172 |
| Msa1075190 | AT3G04450.2 | 45.055 | 182 | 89 | 3 | 175 | 352 | 162 | 336 | 1.15e-49 | 172 |
| Msa1075190 | AT3G04450.1 | 45.055 | 182 | 89 | 3 | 175 | 352 | 202 | 376 | 2.39e-49 | 172 |
| Msa1075190 | AT4G28610.1 | 54.861 | 144 | 63 | 1 | 205 | 346 | 212 | 355 | 1.23e-48 | 170 |
| Msa1075190 | AT2G01060.1 | 50.331 | 151 | 73 | 2 | 216 | 364 | 13 | 163 | 2.12e-47 | 163 |
| Msa1075190 | AT3G13040.3 | 45.810 | 179 | 88 | 4 | 191 | 360 | 211 | 389 | 1.84e-44 | 159 |
| Msa1075190 | AT3G13040.1 | 45.810 | 179 | 88 | 4 | 191 | 360 | 211 | 389 | 1.84e-44 | 159 |
| Msa1075190 | AT3G13040.2 | 45.810 | 179 | 88 | 4 | 191 | 360 | 211 | 389 | 1.84e-44 | 159 |
| Msa1075190 | AT2G20400.1 | 53.077 | 130 | 60 | 1 | 218 | 346 | 231 | 360 | 9.28e-42 | 151 |
| Msa1075190 | AT2G20400.2 | 53.435 | 131 | 59 | 2 | 218 | 346 | 231 | 361 | 3.19e-40 | 147 |
| Msa1075190 | AT3G04030.3 | 45.963 | 161 | 69 | 3 | 207 | 349 | 32 | 192 | 9.54e-38 | 140 |
| Msa1075190 | AT5G06800.3 | 56.081 | 148 | 58 | 6 | 141 | 282 | 110 | 256 | 5.07e-37 | 135 |
| Msa1075190 | AT5G18240.1 | 44.720 | 161 | 71 | 3 | 208 | 350 | 33 | 193 | 1.60e-36 | 137 |
| Msa1075190 | AT5G18240.4 | 44.720 | 161 | 71 | 3 | 208 | 350 | 33 | 193 | 1.60e-36 | 137 |
| Msa1075190 | AT3G04030.2 | 44.720 | 161 | 70 | 4 | 207 | 349 | 32 | 191 | 9.26e-35 | 132 |
| Msa1075190 | AT3G24120.1 | 41.667 | 156 | 71 | 2 | 218 | 353 | 41 | 196 | 1.94e-34 | 129 |
| Msa1075190 | AT1G69580.1 | 42.581 | 155 | 63 | 3 | 217 | 349 | 33 | 183 | 4.63e-34 | 129 |
| Msa1075190 | AT5G18240.5 | 44.099 | 161 | 70 | 4 | 208 | 350 | 33 | 191 | 1.67e-33 | 129 |
| Msa1075190 | AT1G69580.2 | 41.667 | 156 | 64 | 3 | 217 | 349 | 33 | 184 | 5.15e-33 | 126 |
| Msa1075190 | AT3G04030.1 | 43.478 | 161 | 67 | 4 | 207 | 349 | 32 | 186 | 1.38e-32 | 126 |
| Msa1075190 | AT4G13640.1 | 40.940 | 149 | 72 | 2 | 218 | 353 | 37 | 182 | 1.63e-32 | 124 |
| Msa1075190 | AT3G24120.2 | 40.881 | 159 | 71 | 3 | 218 | 353 | 41 | 199 | 2.43e-32 | 124 |
| Msa1075190 | AT5G45580.2 | 40.606 | 165 | 67 | 5 | 218 | 356 | 23 | 182 | 2.74e-32 | 123 |
| Msa1075190 | AT5G45580.1 | 40.606 | 165 | 67 | 5 | 218 | 356 | 7 | 166 | 2.99e-32 | 122 |
| Msa1075190 | AT1G79430.2 | 43.333 | 150 | 74 | 5 | 211 | 353 | 25 | 170 | 3.12e-32 | 124 |
| Msa1075190 | AT5G18240.2 | 42.236 | 161 | 69 | 4 | 208 | 350 | 33 | 187 | 2.64e-31 | 123 |
| Msa1075190 | AT5G18240.3 | 42.236 | 161 | 69 | 4 | 208 | 350 | 33 | 187 | 2.64e-31 | 123 |
| Msa1075190 | AT4G13640.2 | 40.132 | 152 | 72 | 3 | 218 | 353 | 37 | 185 | 1.69e-30 | 119 |
| Msa1075190 | AT2G01060.2 | 49.123 | 114 | 56 | 2 | 253 | 364 | 1 | 114 | 7.78e-29 | 112 |
| Msa1075190 | AT5G29000.4 | 57.955 | 88 | 35 | 1 | 205 | 290 | 218 | 305 | 3.43e-28 | 112 |
| Msa1075190 | AT3G04450.3 | 46.154 | 104 | 49 | 2 | 175 | 278 | 202 | 298 | 4.48e-26 | 107 |
| Msa1075190 | AT3G12730.1 | 38.562 | 153 | 81 | 5 | 209 | 349 | 12 | 163 | 2.86e-25 | 103 |
| Msa1075190 | AT2G42660.1 | 55.072 | 69 | 31 | 0 | 214 | 282 | 46 | 114 | 3.20e-19 | 86.7 |
| Msa1075190 | AT3G04030.5 | 41.379 | 116 | 52 | 2 | 250 | 349 | 1 | 116 | 2.75e-18 | 85.1 |
| Msa1075190 | AT4G04605.1 | 50.000 | 78 | 36 | 1 | 214 | 288 | 10 | 87 | 6.39e-17 | 79.3 |
| Msa1075190 | AT2G38300.1 | 58.065 | 62 | 26 | 0 | 214 | 275 | 50 | 111 | 7.88e-17 | 81.3 |
| Msa1075190 | AT4G17695.1 | 54.412 | 68 | 29 | 1 | 220 | 285 | 166 | 233 | 1.00e-16 | 80.9 |
| Msa1075190 | AT2G02060.2 | 63.793 | 58 | 21 | 0 | 214 | 271 | 25 | 82 | 1.11e-16 | 79.7 |
| Msa1075190 | AT2G02060.1 | 63.793 | 58 | 21 | 0 | 214 | 271 | 25 | 82 | 1.11e-16 | 79.7 |
| Msa1075190 | AT1G14600.1 | 58.065 | 62 | 26 | 0 | 214 | 275 | 19 | 80 | 1.86e-16 | 79.0 |
| Msa1075190 | AT1G32240.2 | 54.412 | 68 | 29 | 1 | 220 | 285 | 215 | 282 | 1.94e-16 | 80.5 |
| Msa1075190 | AT1G32240.1 | 54.412 | 68 | 29 | 1 | 220 | 285 | 215 | 282 | 2.62e-16 | 80.1 |
| Msa1075190 | AT5G16560.1 | 60.000 | 55 | 22 | 0 | 220 | 274 | 221 | 275 | 6.61e-16 | 79.0 |
| Msa1075190 | AT1G79430.1 | 38.532 | 109 | 58 | 4 | 250 | 353 | 1 | 105 | 1.03e-15 | 77.4 |
| Msa1075190 | AT5G42630.2 | 51.562 | 64 | 31 | 0 | 220 | 283 | 107 | 170 | 2.74e-15 | 74.7 |
| Msa1075190 | AT2G06020.1 | 54.386 | 57 | 26 | 0 | 218 | 274 | 86 | 142 | 3.52e-15 | 75.9 |
| Msa1075190 | AT5G42630.1 | 51.562 | 64 | 31 | 0 | 220 | 283 | 107 | 170 | 4.68e-15 | 75.1 |
| Msa1075190 | AT2G40260.1 | 57.627 | 59 | 24 | 1 | 217 | 274 | 80 | 138 | 9.46e-15 | 75.9 |
| Msa1075190 | AT4G04580.1 | 50.820 | 61 | 30 | 0 | 214 | 274 | 10 | 70 | 5.52e-14 | 69.7 |
| Msa1075190 | AT3G04030.4 | 37.931 | 116 | 50 | 3 | 250 | 349 | 1 | 110 | 1.63e-13 | 71.2 |
| Msa1075190 | AT4G04555.1 | 51.471 | 68 | 28 | 1 | 212 | 274 | 3 | 70 | 3.52e-13 | 65.9 |
| Msa1075190 | AT4G37180.1 | 50.000 | 64 | 32 | 0 | 208 | 271 | 200 | 263 | 6.71e-13 | 69.7 |
| Msa1075190 | AT4G37180.2 | 50.000 | 64 | 32 | 0 | 208 | 271 | 207 | 270 | 8.52e-13 | 69.3 |
| Msa1075190 | AT5G18240.6 | 35.897 | 117 | 53 | 3 | 250 | 350 | 1 | 111 | 2.13e-12 | 67.8 |
| Msa1075190 | AT2G40970.1 | 46.053 | 76 | 38 | 2 | 198 | 271 | 83 | 157 | 1.05e-11 | 65.1 |
| Msa1075190 | AT2G03500.1 | 49.254 | 67 | 31 | 1 | 205 | 271 | 223 | 286 | 3.19e-11 | 65.1 |
| Msa1075190 | AT4G37180.3 | 47.541 | 61 | 32 | 0 | 208 | 268 | 200 | 260 | 9.92e-11 | 62.4 |
Find 54 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATCATCATTGATTGTATT+TGG | 0.166617 | 7_2:+73336662 | None:intergenic |
| AAGGGAAAACAATCATTTAT+TGG | 0.215858 | 7_2:-73338621 | Msa1075190:CDS |
| TCCCTTTGTGTCAATCTCTA+AGG | 0.220544 | 7_2:-73338640 | Msa1075190:CDS |
| TGATTCTCCTTCTTCAACTA+TGG | 0.222200 | 7_2:+73338823 | None:intergenic |
| CAGCAAAAGTTGTTCTTTGA+TGG | 0.257577 | 7_2:-73338440 | Msa1075190:CDS |
| ATCATATAAGGTTAATGATT+TGG | 0.267300 | 7_2:-73338666 | Msa1075190:CDS |
| GTGTTTGTATTACATGATTT+TGG | 0.272236 | 7_2:+73338800 | None:intergenic |
| ATCATCTTCAATATAGCTTT+TGG | 0.290192 | 7_2:+73337737 | None:intergenic |
| TTTGAGTTCTCAATCATATA+AGG | 0.290541 | 7_2:-73338678 | Msa1075190:CDS |
| ATGAATCAAATTTGGAATAT+AGG | 0.310941 | 7_2:-73338869 | Msa1075190:CDS |
| CATGCTGCACATCATCTATA+TGG | 0.344546 | 7_2:+73337225 | None:intergenic |
| TAATGGAAATCATGACTATA+TGG | 0.366206 | 7_2:-73338381 | Msa1075190:intron |
| AAACTTCCTGCTGAAATTGT+TGG | 0.389210 | 7_2:+73337980 | None:intergenic |
| TTGAGTGTGTGAATCGCCTT+GGG | 0.396796 | 7_2:-73337865 | Msa1075190:CDS |
| GGAAGTTTATCAACTTCTCT+TGG | 0.397953 | 7_2:-73337965 | Msa1075190:CDS |
| GTGTTAGACAATTCAAAGTT+GGG | 0.406018 | 7_2:+73338578 | None:intergenic |
| GTCTAACACTTTGCAAGCAT+TGG | 0.409907 | 7_2:-73338564 | Msa1075190:CDS |
| AGTGTTAGACAATTCAAAGT+TGG | 0.421062 | 7_2:+73338577 | None:intergenic |
| GTTGAGTGTGTGAATCGCCT+TGG | 0.458117 | 7_2:-73337866 | Msa1075190:CDS |
| CAAGTAAAACAAGAATTAGA+TGG | 0.463217 | 7_2:-73337913 | Msa1075190:CDS |
| TTGCAGTGGCTTTCAAATCA+AGG | 0.468098 | 7_2:-73337048 | Msa1075190:intron |
| AAAAGCTATATTGAAGATGA+TGG | 0.473225 | 7_2:-73337735 | Msa1075190:CDS |
| CCCTTAGAGATTGACACAAA+GGG | 0.473466 | 7_2:+73338639 | None:intergenic |
| AAGATTGATTATTATCAACT+TGG | 0.481452 | 7_2:+73338699 | None:intergenic |
| AACAAGAATTAGATGGACTA+AGG | 0.489147 | 7_2:-73337906 | Msa1075190:CDS |
| TTGGTGAAATCTCAATTGAA+TGG | 0.505462 | 7_2:-73338545 | Msa1075190:CDS |
| CCCTTTGTGTCAATCTCTAA+GGG | 0.510278 | 7_2:-73338639 | Msa1075190:CDS |
| ATTCAAAGTTGGGGTCATGC+TGG | 0.513658 | 7_2:+73338588 | None:intergenic |
| CTTGGAAGCACTTCTTCTAG+TGG | 0.515481 | 7_2:-73337947 | Msa1075190:CDS |
| GTTGAGGTTTCTATTTCTGA+AGG | 0.516998 | 7_2:-73336620 | Msa1075190:CDS |
| TTGAGGTTTCTATTTCTGAA+GGG | 0.518136 | 7_2:-73336619 | Msa1075190:CDS |
| TTGTCTCCAACAATTTCAGC+AGG | 0.521373 | 7_2:-73337986 | Msa1075190:CDS |
| AAATATTGCTAAAGATGTTG+AGG | 0.533851 | 7_2:-73336636 | Msa1075190:CDS |
| AAATTACCTTGAGCTGACTC+TGG | 0.535434 | 7_2:+73337644 | None:intergenic |
| TGAGGTTTCTATTTCTGAAG+GGG | 0.541433 | 7_2:-73336618 | Msa1075190:CDS |
| CAACTATCCATAGTTGAAGA+AGG | 0.544834 | 7_2:-73338830 | Msa1075190:CDS |
| CAGAAGCTGGTGACTCGAAA+CGG | 0.549320 | 7_2:+73338768 | None:intergenic |
| TTGGAAGCACTTCTTCTAGT+GGG | 0.558294 | 7_2:-73337946 | Msa1075190:CDS |
| TATGCAACAGAAAACTGCAT+GGG | 0.559407 | 7_2:-73338740 | Msa1075190:CDS |
| ATCCGTTTGCAGGTTGCTCG+TGG | 0.560326 | 7_2:-73338061 | Msa1075190:intron |
| TCCCTTAGAGATTGACACAA+AGG | 0.575040 | 7_2:+73338638 | None:intergenic |
| TTATGCAACAGAAAACTGCA+TGG | 0.589899 | 7_2:-73338741 | Msa1075190:CDS |
| TTGTATTTGGAGTATTGAAG+AGG | 0.600647 | 7_2:+73336675 | None:intergenic |
| GCGTCTTCATGAACAACTAG+AGG | 0.618964 | 7_2:-73336994 | Msa1075190:intron |
| TTGAAGATGATGGACTCTGA+AGG | 0.627815 | 7_2:-73337725 | Msa1075190:CDS |
| TGTTAGACAATTCAAAGTTG+GGG | 0.628448 | 7_2:+73338579 | None:intergenic |
| TTCATGCCAGAGTCAGCTCA+AGG | 0.639842 | 7_2:-73337650 | Msa1075190:intron |
| CAATTGCGACTTGAGGAACA+AGG | 0.653307 | 7_2:-73336746 | Msa1075190:CDS |
| AACGTTACAATTGCGACTTG+AGG | 0.655322 | 7_2:-73336753 | Msa1075190:CDS |
| AACTTCAATTAGATGCACAA+AGG | 0.668848 | 7_2:-73337016 | Msa1075190:CDS |
| TGATGAGCTGTTGCTAACTG+AGG | 0.672832 | 7_2:+73338412 | None:intergenic |
| ATAGATGATGTGCAGCATGT+TGG | 0.702726 | 7_2:-73337221 | Msa1075190:CDS |
| GAGTGTGTGAATCGCCTTGG+GGG | 0.715113 | 7_2:-73337863 | Msa1075190:CDS |
| TGAGTGTGTGAATCGCCTTG+GGG | 0.716876 | 7_2:-73337864 | Msa1075190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CCATATAAAATAAAAAAATA+AGG | + | chr7_2:73338639-73338658 | None:intergenic | 10.0% |
| !!! | CCTTATTTTTTTATTTTATA+TGG | - | chr7_2:73338636-73338655 | Msa1075190:CDS | 10.0% |
| !! | CCATATAAAATAAAAAAATA+AGG | + | chr7_2:73338639-73338658 | None:intergenic | 10.0% |
| !!! | CCTTATTTTTTTATTTTATA+TGG | - | chr7_2:73338636-73338655 | Msa1075190:CDS | 10.0% |
| !!! | AAAATTTATTCAAGTTTTCT+GGG | + | chr7_2:73336969-73336988 | None:intergenic | 15.0% |
| !!! | AAAATTTATTCAAGTTTTCT+GGG | + | chr7_2:73336969-73336988 | None:intergenic | 15.0% |
| !!! | ATGAATCAAATTTGGAATAT+AGG | - | chr7_2:73336601-73336620 | Msa1075190:CDS | 20.0% |
| !! | AAGATTGATTATTATCAACT+TGG | + | chr7_2:73336774-73336793 | None:intergenic | 20.0% |
| !! | ATCATATAAGGTTAATGATT+TGG | - | chr7_2:73336804-73336823 | Msa1075190:intron | 20.0% |
| !!! | GAAAATTTATTCAAGTTTTC+TGG | + | chr7_2:73336970-73336989 | None:intergenic | 20.0% |
| !!! | AACTTGAATAAATTTTCATG+TGG | - | chr7_2:73336973-73336992 | Msa1075190:intron | 20.0% |
| !!! | ACTTGAATAAATTTTCATGT+GGG | - | chr7_2:73336974-73336993 | Msa1075190:intron | 20.0% |
| !! | AGTATAAATATGTTATGACA+CGG | + | chr7_2:73337225-73337244 | None:intergenic | 20.0% |
| !!! | ACATTAGTTTGTTCAATATT+AGG | + | chr7_2:73338194-73338213 | None:intergenic | 20.0% |
| !! | TTAGAGTCATATAACATATA+AGG | + | chr7_2:73338373-73338392 | None:intergenic | 20.0% |
| !! | AAGTTCATAAAGAAAATGAA+TGG | + | chr7_2:73338512-73338531 | None:intergenic | 20.0% |
| !! | TTTCTAATCATATTCTTTCT+TGG | - | chr7_2:73338681-73338700 | Msa1075190:CDS | 20.0% |
| !!! | ATGAATCAAATTTGGAATAT+AGG | - | chr7_2:73336601-73336620 | Msa1075190:CDS | 20.0% |
| !! | AAGATTGATTATTATCAACT+TGG | + | chr7_2:73336774-73336793 | None:intergenic | 20.0% |
| !! | ATCATATAAGGTTAATGATT+TGG | - | chr7_2:73336804-73336823 | Msa1075190:intron | 20.0% |
| !!! | GAAAATTTATTCAAGTTTTC+TGG | + | chr7_2:73336970-73336989 | None:intergenic | 20.0% |
| !!! | AACTTGAATAAATTTTCATG+TGG | - | chr7_2:73336973-73336992 | Msa1075190:intron | 20.0% |
| !!! | ACTTGAATAAATTTTCATGT+GGG | - | chr7_2:73336974-73336993 | Msa1075190:intron | 20.0% |
| !! | AGTATAAATATGTTATGACA+CGG | + | chr7_2:73337225-73337244 | None:intergenic | 20.0% |
| !!! | ACATTAGTTTGTTCAATATT+AGG | + | chr7_2:73338194-73338213 | None:intergenic | 20.0% |
| !! | TTAGAGTCATATAACATATA+AGG | + | chr7_2:73338373-73338392 | None:intergenic | 20.0% |
| !! | AAGTTCATAAAGAAAATGAA+TGG | + | chr7_2:73338512-73338531 | None:intergenic | 20.0% |
| !! | TTTCTAATCATATTCTTTCT+TGG | - | chr7_2:73338681-73338700 | Msa1075190:CDS | 20.0% |
| !! | GTGTTTGTATTACATGATTT+TGG | + | chr7_2:73336673-73336692 | None:intergenic | 25.0% |
| !! | TTTGAGTTCTCAATCATATA+AGG | - | chr7_2:73336792-73336811 | Msa1075190:intron | 25.0% |
| ! | AAGGGAAAACAATCATTTAT+TGG | - | chr7_2:73336849-73336868 | Msa1075190:intron | 25.0% |
| !! | AGCTCATCATTTTGTAATAA+TGG | - | chr7_2:73337072-73337091 | Msa1075190:intron | 25.0% |
| ! | TAATGGAAATCATGACTATA+TGG | - | chr7_2:73337089-73337108 | Msa1075190:intron | 25.0% |
| ! | ATAAATGATTGTGTCACATT+AGG | - | chr7_2:73337353-73337372 | Msa1075190:intron | 25.0% |
| ! | CAAGTAAAACAAGAATTAGA+TGG | - | chr7_2:73337557-73337576 | Msa1075190:intron | 25.0% |
| !! | ATTCTGATAGTCTTTTCTAT+TGG | - | chr7_2:73337688-73337707 | Msa1075190:CDS | 25.0% |
| !! | ATCATCTTCAATATAGCTTT+TGG | + | chr7_2:73337736-73337755 | None:intergenic | 25.0% |
| ! | AAAAGCTATATTGAAGATGA+TGG | - | chr7_2:73337735-73337754 | Msa1075190:CDS | 25.0% |
| !! | ATGACTTTTCACATGAAATA+TGG | + | chr7_2:73337776-73337795 | None:intergenic | 25.0% |
| ! | CTCAACATGAAAAATAAACT+AGG | + | chr7_2:73337895-73337914 | None:intergenic | 25.0% |
| !! | TTTGTTATAGTGTTTGTCAA+TGG | - | chr7_2:73337972-73337991 | Msa1075190:CDS | 25.0% |
| ! | CATTATTCACTATGAACAAT+GGG | + | chr7_2:73338021-73338040 | None:intergenic | 25.0% |
| ! | ACATTATTCACTATGAACAA+TGG | + | chr7_2:73338022-73338041 | None:intergenic | 25.0% |
| ! | TGAATAATGTCTGGTTAAAT+AGG | - | chr7_2:73338032-73338051 | Msa1075190:CDS | 25.0% |
| ! | TGTATTTATATCCACTAGAA+TGG | - | chr7_2:73338088-73338107 | Msa1075190:intron | 25.0% |
| ! | GAAAGAAAATAAGCACATTT+GGG | + | chr7_2:73338150-73338169 | None:intergenic | 25.0% |
| ! | TGAAAGAAAATAAGCACATT+TGG | + | chr7_2:73338151-73338170 | None:intergenic | 25.0% |
| !! | TAAGAGTATAAAAGCAGTTT+AGG | + | chr7_2:73338305-73338324 | None:intergenic | 25.0% |
| ! | ATGAAATTAATCAAGCAACT+TGG | + | chr7_2:73338345-73338364 | None:intergenic | 25.0% |
| !!! | CTGTTTTTTAACGATGATTT+AGG | + | chr7_2:73338573-73338592 | None:intergenic | 25.0% |
| ! | TCGTTAAAAAACAGTTTGTA+AGG | - | chr7_2:73338579-73338598 | Msa1075190:CDS | 25.0% |
| ! | AAAAAACAGTTTGTAAGGTA+AGG | - | chr7_2:73338584-73338603 | Msa1075190:CDS | 25.0% |
| !! | GTATCATCATTGATTGTATT+TGG | + | chr7_2:73338811-73338830 | None:intergenic | 25.0% |
| ! | AAATATTGCTAAAGATGTTG+AGG | - | chr7_2:73338834-73338853 | Msa1075190:CDS | 25.0% |
| !! | GTGTTTGTATTACATGATTT+TGG | + | chr7_2:73336673-73336692 | None:intergenic | 25.0% |
| !! | TTTGAGTTCTCAATCATATA+AGG | - | chr7_2:73336792-73336811 | Msa1075190:intron | 25.0% |
| ! | AAGGGAAAACAATCATTTAT+TGG | - | chr7_2:73336849-73336868 | Msa1075190:intron | 25.0% |
| !! | AGCTCATCATTTTGTAATAA+TGG | - | chr7_2:73337072-73337091 | Msa1075190:intron | 25.0% |
| ! | TAATGGAAATCATGACTATA+TGG | - | chr7_2:73337089-73337108 | Msa1075190:intron | 25.0% |
| ! | ATAAATGATTGTGTCACATT+AGG | - | chr7_2:73337353-73337372 | Msa1075190:intron | 25.0% |
| ! | CAAGTAAAACAAGAATTAGA+TGG | - | chr7_2:73337557-73337576 | Msa1075190:intron | 25.0% |
| !! | ATTCTGATAGTCTTTTCTAT+TGG | - | chr7_2:73337688-73337707 | Msa1075190:CDS | 25.0% |
| !! | ATCATCTTCAATATAGCTTT+TGG | + | chr7_2:73337736-73337755 | None:intergenic | 25.0% |
| ! | AAAAGCTATATTGAAGATGA+TGG | - | chr7_2:73337735-73337754 | Msa1075190:CDS | 25.0% |
| !! | ATGACTTTTCACATGAAATA+TGG | + | chr7_2:73337776-73337795 | None:intergenic | 25.0% |
| ! | CTCAACATGAAAAATAAACT+AGG | + | chr7_2:73337895-73337914 | None:intergenic | 25.0% |
| !! | TTTGTTATAGTGTTTGTCAA+TGG | - | chr7_2:73337972-73337991 | Msa1075190:CDS | 25.0% |
| ! | CATTATTCACTATGAACAAT+GGG | + | chr7_2:73338021-73338040 | None:intergenic | 25.0% |
| ! | ACATTATTCACTATGAACAA+TGG | + | chr7_2:73338022-73338041 | None:intergenic | 25.0% |
| ! | TGAATAATGTCTGGTTAAAT+AGG | - | chr7_2:73338032-73338051 | Msa1075190:CDS | 25.0% |
| ! | TGTATTTATATCCACTAGAA+TGG | - | chr7_2:73338088-73338107 | Msa1075190:intron | 25.0% |
| ! | GAAAGAAAATAAGCACATTT+GGG | + | chr7_2:73338150-73338169 | None:intergenic | 25.0% |
| ! | TGAAAGAAAATAAGCACATT+TGG | + | chr7_2:73338151-73338170 | None:intergenic | 25.0% |
| !! | TAAGAGTATAAAAGCAGTTT+AGG | + | chr7_2:73338305-73338324 | None:intergenic | 25.0% |
| ! | ATGAAATTAATCAAGCAACT+TGG | + | chr7_2:73338345-73338364 | None:intergenic | 25.0% |
| !!! | CTGTTTTTTAACGATGATTT+AGG | + | chr7_2:73338573-73338592 | None:intergenic | 25.0% |
| ! | TCGTTAAAAAACAGTTTGTA+AGG | - | chr7_2:73338579-73338598 | Msa1075190:CDS | 25.0% |
| ! | AAAAAACAGTTTGTAAGGTA+AGG | - | chr7_2:73338584-73338603 | Msa1075190:CDS | 25.0% |
| !! | GTATCATCATTGATTGTATT+TGG | + | chr7_2:73338811-73338830 | None:intergenic | 25.0% |
| ! | AAATATTGCTAAAGATGTTG+AGG | - | chr7_2:73338834-73338853 | Msa1075190:CDS | 25.0% |
| TGTTAGACAATTCAAAGTTG+GGG | + | chr7_2:73336894-73336913 | None:intergenic | 30.0% | |
| GTGTTAGACAATTCAAAGTT+GGG | + | chr7_2:73336895-73336914 | None:intergenic | 30.0% | |
| AGTGTTAGACAATTCAAAGT+TGG | + | chr7_2:73336896-73336915 | None:intergenic | 30.0% | |
| TTGGTGAAATCTCAATTGAA+TGG | - | chr7_2:73336925-73336944 | Msa1075190:intron | 30.0% | |
| ! | TTTTCATGTGGGAATTTTTC+TGG | - | chr7_2:73336985-73337004 | Msa1075190:intron | 30.0% |
| ! | TTTCATGTGGGAATTTTTCT+GGG | - | chr7_2:73336986-73337005 | Msa1075190:intron | 30.0% |
| !!! | TTTTGCTGTTCAATTGGAAA+AGG | + | chr7_2:73337018-73337037 | None:intergenic | 30.0% |
| !!! | AACAACTTTTGCTGTTCAAT+TGG | + | chr7_2:73337024-73337043 | None:intergenic | 30.0% |
| AATCATGACTATATGGTAAG+TGG | - | chr7_2:73337096-73337115 | Msa1075190:intron | 30.0% | |
| !! | AACAAGAATTAGATGGACTA+AGG | - | chr7_2:73337564-73337583 | Msa1075190:intron | 30.0% |
| !! | TATTGGTTTCTTGCTTATAG+AGG | - | chr7_2:73337705-73337724 | Msa1075190:CDS | 30.0% |
| TATAGTGTTTGTCAATGGAT+AGG | - | chr7_2:73337977-73337996 | Msa1075190:CDS | 30.0% | |
| TTTGTCAATGGATAGGATAT+AGG | - | chr7_2:73337984-73338003 | Msa1075190:CDS | 30.0% | |
| TGTTCATAGTGAATAATGTC+TGG | - | chr7_2:73338023-73338042 | Msa1075190:CDS | 30.0% | |
| AAACTAATGTGTCCAATTTC+AGG | - | chr7_2:73338204-73338223 | Msa1075190:intron | 30.0% | |
| AACTAATGTGTCCAATTTCA+GGG | - | chr7_2:73338205-73338224 | Msa1075190:intron | 30.0% | |
| AAATTAATCAAGCAACTTGG+TGG | + | chr7_2:73338342-73338361 | None:intergenic | 30.0% | |
| AACTTCAATTAGATGCACAA+AGG | - | chr7_2:73338454-73338473 | Msa1075190:CDS | 30.0% | |
| CATAAAGAAAATGAATGGCA+AGG | + | chr7_2:73338507-73338526 | None:intergenic | 30.0% | |
| ! | GTCTGAAATGAGTTTATAAC+AGG | + | chr7_2:73338617-73338636 | None:intergenic | 30.0% |
| !! | TTGTATTTGGAGTATTGAAG+AGG | + | chr7_2:73338798-73338817 | None:intergenic | 30.0% |
| !! | TTGAGGTTTCTATTTCTGAA+GGG | - | chr7_2:73338851-73338870 | Msa1075190:CDS | 30.0% |
| TGTTAGACAATTCAAAGTTG+GGG | + | chr7_2:73336894-73336913 | None:intergenic | 30.0% | |
| GTGTTAGACAATTCAAAGTT+GGG | + | chr7_2:73336895-73336914 | None:intergenic | 30.0% | |
| AGTGTTAGACAATTCAAAGT+TGG | + | chr7_2:73336896-73336915 | None:intergenic | 30.0% | |
| TTGGTGAAATCTCAATTGAA+TGG | - | chr7_2:73336925-73336944 | Msa1075190:intron | 30.0% | |
| ! | TTTTCATGTGGGAATTTTTC+TGG | - | chr7_2:73336985-73337004 | Msa1075190:intron | 30.0% |
| ! | TTTCATGTGGGAATTTTTCT+GGG | - | chr7_2:73336986-73337005 | Msa1075190:intron | 30.0% |
| !!! | TTTTGCTGTTCAATTGGAAA+AGG | + | chr7_2:73337018-73337037 | None:intergenic | 30.0% |
| !!! | AACAACTTTTGCTGTTCAAT+TGG | + | chr7_2:73337024-73337043 | None:intergenic | 30.0% |
| AATCATGACTATATGGTAAG+TGG | - | chr7_2:73337096-73337115 | Msa1075190:intron | 30.0% | |
| !! | AACAAGAATTAGATGGACTA+AGG | - | chr7_2:73337564-73337583 | Msa1075190:intron | 30.0% |
| !! | TATTGGTTTCTTGCTTATAG+AGG | - | chr7_2:73337705-73337724 | Msa1075190:CDS | 30.0% |
| TATAGTGTTTGTCAATGGAT+AGG | - | chr7_2:73337977-73337996 | Msa1075190:CDS | 30.0% | |
| TTTGTCAATGGATAGGATAT+AGG | - | chr7_2:73337984-73338003 | Msa1075190:CDS | 30.0% | |
| TGTTCATAGTGAATAATGTC+TGG | - | chr7_2:73338023-73338042 | Msa1075190:CDS | 30.0% | |
| AAACTAATGTGTCCAATTTC+AGG | - | chr7_2:73338204-73338223 | Msa1075190:intron | 30.0% | |
| AACTAATGTGTCCAATTTCA+GGG | - | chr7_2:73338205-73338224 | Msa1075190:intron | 30.0% | |
| AAATTAATCAAGCAACTTGG+TGG | + | chr7_2:73338342-73338361 | None:intergenic | 30.0% | |
| AACTTCAATTAGATGCACAA+AGG | - | chr7_2:73338454-73338473 | Msa1075190:CDS | 30.0% | |
| CATAAAGAAAATGAATGGCA+AGG | + | chr7_2:73338507-73338526 | None:intergenic | 30.0% | |
| ! | GTCTGAAATGAGTTTATAAC+AGG | + | chr7_2:73338617-73338636 | None:intergenic | 30.0% |
| !! | TTGTATTTGGAGTATTGAAG+AGG | + | chr7_2:73338798-73338817 | None:intergenic | 30.0% |
| !! | TTGAGGTTTCTATTTCTGAA+GGG | - | chr7_2:73338851-73338870 | Msa1075190:CDS | 30.0% |
| CAACTATCCATAGTTGAAGA+AGG | - | chr7_2:73336640-73336659 | Msa1075190:CDS | 35.0% | |
| TGATTCTCCTTCTTCAACTA+TGG | + | chr7_2:73336650-73336669 | None:intergenic | 35.0% | |
| TTATGCAACAGAAAACTGCA+TGG | - | chr7_2:73336729-73336748 | Msa1075190:CDS | 35.0% | |
| TATGCAACAGAAAACTGCAT+GGG | - | chr7_2:73336730-73336749 | Msa1075190:CDS | 35.0% | |
| !! | TCAAGTTTTCTGGGAATCTA+AGG | + | chr7_2:73336960-73336979 | None:intergenic | 35.0% |
| CAGCAAAAGTTGTTCTTTGA+TGG | - | chr7_2:73337030-73337049 | Msa1075190:CDS | 35.0% | |
| TAATTATAGCATCCGTTTGC+AGG | - | chr7_2:73337399-73337418 | Msa1075190:intron | 35.0% | |
| AAACTTCCTGCTGAAATTGT+TGG | + | chr7_2:73337493-73337512 | None:intergenic | 35.0% | |
| GGAAGTTTATCAACTTCTCT+TGG | - | chr7_2:73337505-73337524 | Msa1075190:intron | 35.0% | |
| TCAAACTTCTACCATTCTAG+TGG | + | chr7_2:73338102-73338121 | None:intergenic | 35.0% | |
| TTGTCAGATTTCCCTGAAAT+TGG | + | chr7_2:73338219-73338238 | None:intergenic | 35.0% | |
| !! | GTTGAGGTTTCTATTTCTGA+AGG | - | chr7_2:73338850-73338869 | Msa1075190:CDS | 35.0% |
| !! | TGAGGTTTCTATTTCTGAAG+GGG | - | chr7_2:73338852-73338871 | Msa1075190:CDS | 35.0% |
| CAACTATCCATAGTTGAAGA+AGG | - | chr7_2:73336640-73336659 | Msa1075190:CDS | 35.0% | |
| TGATTCTCCTTCTTCAACTA+TGG | + | chr7_2:73336650-73336669 | None:intergenic | 35.0% | |
| TTATGCAACAGAAAACTGCA+TGG | - | chr7_2:73336729-73336748 | Msa1075190:CDS | 35.0% | |
| TATGCAACAGAAAACTGCAT+GGG | - | chr7_2:73336730-73336749 | Msa1075190:CDS | 35.0% | |
| !! | TCAAGTTTTCTGGGAATCTA+AGG | + | chr7_2:73336960-73336979 | None:intergenic | 35.0% |
| CAGCAAAAGTTGTTCTTTGA+TGG | - | chr7_2:73337030-73337049 | Msa1075190:CDS | 35.0% | |
| TAATTATAGCATCCGTTTGC+AGG | - | chr7_2:73337399-73337418 | Msa1075190:intron | 35.0% | |
| AAACTTCCTGCTGAAATTGT+TGG | + | chr7_2:73337493-73337512 | None:intergenic | 35.0% | |
| GGAAGTTTATCAACTTCTCT+TGG | - | chr7_2:73337505-73337524 | Msa1075190:intron | 35.0% | |
| TCAAACTTCTACCATTCTAG+TGG | + | chr7_2:73338102-73338121 | None:intergenic | 35.0% | |
| TTGTCAGATTTCCCTGAAAT+TGG | + | chr7_2:73338219-73338238 | None:intergenic | 35.0% | |
| !! | GTTGAGGTTTCTATTTCTGA+AGG | - | chr7_2:73338850-73338869 | Msa1075190:CDS | 35.0% |
| !! | TGAGGTTTCTATTTCTGAAG+GGG | - | chr7_2:73338852-73338871 | Msa1075190:CDS | 35.0% |
| GTTGCATAAAAAGCAGAAGC+TGG | + | chr7_2:73336718-73336737 | None:intergenic | 40.0% | |
| TCCCTTTGTGTCAATCTCTA+AGG | - | chr7_2:73336830-73336849 | Msa1075190:intron | 40.0% | |
| CCCTTAGAGATTGACACAAA+GGG | + | chr7_2:73336834-73336853 | None:intergenic | 40.0% | |
| CCCTTTGTGTCAATCTCTAA+GGG | - | chr7_2:73336831-73336850 | Msa1075190:intron | 40.0% | |
| TCCCTTAGAGATTGACACAA+AGG | + | chr7_2:73336835-73336854 | None:intergenic | 40.0% | |
| GTCTAACACTTTGCAAGCAT+TGG | - | chr7_2:73336906-73336925 | Msa1075190:intron | 40.0% | |
| TCCAACGATCAAGATACTAC+TGG | - | chr7_2:73337174-73337193 | Msa1075190:intron | 40.0% | |
| TCCAGTAGTATCTTGATCGT+TGG | + | chr7_2:73337178-73337197 | None:intergenic | 40.0% | |
| AACGATCAAGATACTACTGG+AGG | - | chr7_2:73337177-73337196 | Msa1075190:intron | 40.0% | |
| TTGAGAATCCTTGTGTCTCA+CGG | - | chr7_2:73337248-73337267 | Msa1075190:intron | 40.0% | |
| TTGTCTCCAACAATTTCAGC+AGG | - | chr7_2:73337484-73337503 | Msa1075190:intron | 40.0% | |
| !! | TTGGAAGCACTTCTTCTAGT+GGG | - | chr7_2:73337524-73337543 | Msa1075190:intron | 40.0% |
| !! | TTGAAGATGATGGACTCTGA+AGG | - | chr7_2:73337745-73337764 | Msa1075190:CDS | 40.0% |
| ! | AAATTACCTTGAGCTGACTC+TGG | + | chr7_2:73337829-73337848 | None:intergenic | 40.0% |
| CATGCTGCACATCATCTATA+TGG | + | chr7_2:73338248-73338267 | None:intergenic | 40.0% | |
| ATAGATGATGTGCAGCATGT+TGG | - | chr7_2:73338249-73338268 | Msa1075190:intron | 40.0% | |
| TTGCAGTGGCTTTCAAATCA+AGG | - | chr7_2:73338422-73338441 | Msa1075190:CDS | 40.0% | |
| AACGTTACAATTGCGACTTG+AGG | - | chr7_2:73338717-73338736 | Msa1075190:CDS | 40.0% | |
| GTTGCATAAAAAGCAGAAGC+TGG | + | chr7_2:73336718-73336737 | None:intergenic | 40.0% | |
| TCCCTTTGTGTCAATCTCTA+AGG | - | chr7_2:73336830-73336849 | Msa1075190:intron | 40.0% | |
| CCCTTAGAGATTGACACAAA+GGG | + | chr7_2:73336834-73336853 | None:intergenic | 40.0% | |
| CCCTTTGTGTCAATCTCTAA+GGG | - | chr7_2:73336831-73336850 | Msa1075190:intron | 40.0% | |
| TCCCTTAGAGATTGACACAA+AGG | + | chr7_2:73336835-73336854 | None:intergenic | 40.0% | |
| GTCTAACACTTTGCAAGCAT+TGG | - | chr7_2:73336906-73336925 | Msa1075190:intron | 40.0% | |
| TCCAACGATCAAGATACTAC+TGG | - | chr7_2:73337174-73337193 | Msa1075190:intron | 40.0% | |
| TCCAGTAGTATCTTGATCGT+TGG | + | chr7_2:73337178-73337197 | None:intergenic | 40.0% | |
| AACGATCAAGATACTACTGG+AGG | - | chr7_2:73337177-73337196 | Msa1075190:intron | 40.0% | |
| TTGAGAATCCTTGTGTCTCA+CGG | - | chr7_2:73337248-73337267 | Msa1075190:intron | 40.0% | |
| TTGTCTCCAACAATTTCAGC+AGG | - | chr7_2:73337484-73337503 | Msa1075190:intron | 40.0% | |
| !! | TTGGAAGCACTTCTTCTAGT+GGG | - | chr7_2:73337524-73337543 | Msa1075190:intron | 40.0% |
| !! | TTGAAGATGATGGACTCTGA+AGG | - | chr7_2:73337745-73337764 | Msa1075190:CDS | 40.0% |
| ! | AAATTACCTTGAGCTGACTC+TGG | + | chr7_2:73337829-73337848 | None:intergenic | 40.0% |
| CATGCTGCACATCATCTATA+TGG | + | chr7_2:73338248-73338267 | None:intergenic | 40.0% | |
| ATAGATGATGTGCAGCATGT+TGG | - | chr7_2:73338249-73338268 | Msa1075190:intron | 40.0% | |
| TTGCAGTGGCTTTCAAATCA+AGG | - | chr7_2:73338422-73338441 | Msa1075190:CDS | 40.0% | |
| AACGTTACAATTGCGACTTG+AGG | - | chr7_2:73338717-73338736 | Msa1075190:CDS | 40.0% | |
| ATTCAAAGTTGGGGTCATGC+TGG | + | chr7_2:73336885-73336904 | None:intergenic | 45.0% | |
| TGATGAGCTGTTGCTAACTG+AGG | + | chr7_2:73337061-73337080 | None:intergenic | 45.0% | |
| ATTCAACGACCAAGCTCTAC+TGG | + | chr7_2:73337151-73337170 | None:intergenic | 45.0% | |
| GATCAAGATACTACTGGAGG+TGG | - | chr7_2:73337180-73337199 | Msa1075190:intron | 45.0% | |
| GTTATGACACGGATCCTCTT+CGG | + | chr7_2:73337214-73337233 | None:intergenic | 45.0% | |
| TGAGAATCCTTGTGTCTCAC+GGG | - | chr7_2:73337249-73337268 | Msa1075190:intron | 45.0% | |
| !! | CTTGGAAGCACTTCTTCTAG+TGG | - | chr7_2:73337523-73337542 | Msa1075190:intron | 45.0% |
| TTGAGTGTGTGAATCGCCTT+GGG | - | chr7_2:73337605-73337624 | Msa1075190:intron | 45.0% | |
| !! | ACACCACTCTTGATTTGCAG+TGG | - | chr7_2:73338408-73338427 | Msa1075190:CDS | 45.0% |
| AAGCCACTGCAAATCAAGAG+TGG | + | chr7_2:73338414-73338433 | None:intergenic | 45.0% | |
| GCGTCTTCATGAACAACTAG+AGG | - | chr7_2:73338476-73338495 | Msa1075190:CDS | 45.0% | |
| CAATTGCGACTTGAGGAACA+AGG | - | chr7_2:73338724-73338743 | Msa1075190:CDS | 45.0% | |
| ATTCAAAGTTGGGGTCATGC+TGG | + | chr7_2:73336885-73336904 | None:intergenic | 45.0% | |
| TGATGAGCTGTTGCTAACTG+AGG | + | chr7_2:73337061-73337080 | None:intergenic | 45.0% | |
| ATTCAACGACCAAGCTCTAC+TGG | + | chr7_2:73337151-73337170 | None:intergenic | 45.0% | |
| GATCAAGATACTACTGGAGG+TGG | - | chr7_2:73337180-73337199 | Msa1075190:intron | 45.0% | |
| GTTATGACACGGATCCTCTT+CGG | + | chr7_2:73337214-73337233 | None:intergenic | 45.0% | |
| TGAGAATCCTTGTGTCTCAC+GGG | - | chr7_2:73337249-73337268 | Msa1075190:intron | 45.0% | |
| !! | CTTGGAAGCACTTCTTCTAG+TGG | - | chr7_2:73337523-73337542 | Msa1075190:intron | 45.0% |
| TTGAGTGTGTGAATCGCCTT+GGG | - | chr7_2:73337605-73337624 | Msa1075190:intron | 45.0% | |
| !! | ACACCACTCTTGATTTGCAG+TGG | - | chr7_2:73338408-73338427 | Msa1075190:CDS | 45.0% |
| AAGCCACTGCAAATCAAGAG+TGG | + | chr7_2:73338414-73338433 | None:intergenic | 45.0% | |
| GCGTCTTCATGAACAACTAG+AGG | - | chr7_2:73338476-73338495 | Msa1075190:CDS | 45.0% | |
| CAATTGCGACTTGAGGAACA+AGG | - | chr7_2:73338724-73338743 | Msa1075190:CDS | 45.0% | |
| !!! | CTTATTTTTTTATTTTATAT+GGG | - | chr7_2:73338637-73338656 | Msa1075190:CDS | 5.0% |
| !!! | CTTATTTTTTTATTTTATAT+GGG | - | chr7_2:73338637-73338656 | Msa1075190:CDS | 5.0% |
| CAGAAGCTGGTGACTCGAAA+CGG | + | chr7_2:73336705-73336724 | None:intergenic | 50.0% | |
| CAAGATACTACTGGAGGTGG+TGG | - | chr7_2:73337183-73337202 | Msa1075190:intron | 50.0% | |
| GAGAATCCTTGTGTCTCACG+GGG | - | chr7_2:73337250-73337269 | Msa1075190:intron | 50.0% | |
| TTTCTTCCCCGTGAGACACA+AGG | + | chr7_2:73337259-73337278 | None:intergenic | 50.0% | |
| ATCCACGAGCAACCTGCAAA+CGG | + | chr7_2:73337414-73337433 | None:intergenic | 50.0% | |
| GTTGAGTGTGTGAATCGCCT+TGG | - | chr7_2:73337604-73337623 | Msa1075190:intron | 50.0% | |
| TGAGTGTGTGAATCGCCTTG+GGG | - | chr7_2:73337606-73337625 | Msa1075190:intron | 50.0% | |
| TTCATGCCAGAGTCAGCTCA+AGG | - | chr7_2:73337820-73337839 | Msa1075190:intron | 50.0% | |
| CAGAAGCTGGTGACTCGAAA+CGG | + | chr7_2:73336705-73336724 | None:intergenic | 50.0% | |
| CAAGATACTACTGGAGGTGG+TGG | - | chr7_2:73337183-73337202 | Msa1075190:intron | 50.0% | |
| GAGAATCCTTGTGTCTCACG+GGG | - | chr7_2:73337250-73337269 | Msa1075190:intron | 50.0% | |
| TTTCTTCCCCGTGAGACACA+AGG | + | chr7_2:73337259-73337278 | None:intergenic | 50.0% | |
| ATCCACGAGCAACCTGCAAA+CGG | + | chr7_2:73337414-73337433 | None:intergenic | 50.0% | |
| GTTGAGTGTGTGAATCGCCT+TGG | - | chr7_2:73337604-73337623 | Msa1075190:intron | 50.0% | |
| TGAGTGTGTGAATCGCCTTG+GGG | - | chr7_2:73337606-73337625 | Msa1075190:intron | 50.0% | |
| TTCATGCCAGAGTCAGCTCA+AGG | - | chr7_2:73337820-73337839 | Msa1075190:intron | 50.0% | |
| ACGACCAAGCTCTACTGGAG+AGG | + | chr7_2:73337146-73337165 | None:intergenic | 55.0% | |
| ATCCGTTTGCAGGTTGCTCG+TGG | - | chr7_2:73337409-73337428 | Msa1075190:intron | 55.0% | |
| GAGTGTGTGAATCGCCTTGG+GGG | - | chr7_2:73337607-73337626 | Msa1075190:intron | 55.0% | |
| ACTTACTCTCAGCACCCCCA+AGG | + | chr7_2:73337624-73337643 | None:intergenic | 55.0% | |
| ACGACCAAGCTCTACTGGAG+AGG | + | chr7_2:73337146-73337165 | None:intergenic | 55.0% | |
| ATCCGTTTGCAGGTTGCTCG+TGG | - | chr7_2:73337409-73337428 | Msa1075190:intron | 55.0% | |
| GAGTGTGTGAATCGCCTTGG+GGG | - | chr7_2:73337607-73337626 | Msa1075190:intron | 55.0% | |
| ACTTACTCTCAGCACCCCCA+AGG | + | chr7_2:73337624-73337643 | None:intergenic | 55.0% | |
| GCAGCCTCTCCAGTAGAGCT+TGG | - | chr7_2:73337139-73337158 | Msa1075190:intron | 60.0% | |
| !! | AGGTGGTGGAGAGACCGAAG+AGG | - | chr7_2:73337197-73337216 | Msa1075190:intron | 60.0% |
| GCAGCCTCTCCAGTAGAGCT+TGG | - | chr7_2:73337139-73337158 | Msa1075190:intron | 60.0% | |
| !! | AGGTGGTGGAGAGACCGAAG+AGG | - | chr7_2:73337197-73337216 | Msa1075190:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 73336601 | 73338891 | 73336601 | ID=Msa1075190;Name=Msa1075190 |
| chr7_2 | mRNA | 73336601 | 73338891 | 73336601 | ID=Msa1075190-mRNA-1;Parent=Msa1075190;Name=Msa1075190-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0|0|1|1|1|6|0|383 |
| chr7_2 | exon | 73338382 | 73338891 | 73338382 | ID=Msa1075190-mRNA-1:exon:17055;Parent=Msa1075190-mRNA-1 |
| chr7_2 | exon | 73337855 | 73338071 | 73337855 | ID=Msa1075190-mRNA-1:exon:17054;Parent=Msa1075190-mRNA-1 |
| chr7_2 | exon | 73337651 | 73337767 | 73337651 | ID=Msa1075190-mRNA-1:exon:17053;Parent=Msa1075190-mRNA-1 |
| chr7_2 | exon | 73337212 | 73337266 | 73337212 | ID=Msa1075190-mRNA-1:exon:17052;Parent=Msa1075190-mRNA-1 |
| chr7_2 | exon | 73336995 | 73337064 | 73336995 | ID=Msa1075190-mRNA-1:exon:17051;Parent=Msa1075190-mRNA-1 |
| chr7_2 | exon | 73336601 | 73336783 | 73336601 | ID=Msa1075190-mRNA-1:exon:17050;Parent=Msa1075190-mRNA-1 |
| chr7_2 | CDS | 73338382 | 73338891 | 73338382 | ID=Msa1075190-mRNA-1:cds;Parent=Msa1075190-mRNA-1 |
| chr7_2 | CDS | 73337855 | 73338071 | 73337855 | ID=Msa1075190-mRNA-1:cds;Parent=Msa1075190-mRNA-1 |
| chr7_2 | CDS | 73337651 | 73337767 | 73337651 | ID=Msa1075190-mRNA-1:cds;Parent=Msa1075190-mRNA-1 |
| chr7_2 | CDS | 73337212 | 73337266 | 73337212 | ID=Msa1075190-mRNA-1:cds;Parent=Msa1075190-mRNA-1 |
| chr7_2 | CDS | 73336995 | 73337064 | 73336995 | ID=Msa1075190-mRNA-1:cds;Parent=Msa1075190-mRNA-1 |
| chr7_2 | CDS | 73336601 | 73336783 | 73336601 | ID=Msa1075190-mRNA-1:cds;Parent=Msa1075190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
