Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162520 | XP_003625245.1 | 96.053 | 380 | 9 | 1 | 1 | 380 | 1 | 374 | 0.0 | 749 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162520 | sp|Q0WVU3|PHL5_ARATH | 55.042 | 238 | 91 | 6 | 149 | 382 | 120 | 345 | 1.06e-67 | 221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162520 | G7KVC1 | 96.053 | 380 | 9 | 1 | 1 | 380 | 1 | 374 | 0.0 | 749 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1162520 | TF | GARP-G2-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa1162520 | -0.820947 | 5.239698e-53 | -8.615850e-47 |
| Msa0004180 | Msa1162520 | -0.824081 | 9.792188e-54 | -8.615850e-47 |
| Msa0011440 | Msa1162520 | -0.814919 | 1.205574e-51 | -8.615850e-47 |
| Msa0011450 | Msa1162520 | -0.810004 | 1.429726e-50 | -8.615850e-47 |
| Msa0017300 | Msa1162520 | -0.806617 | 7.538972e-50 | -8.615850e-47 |
| Msa0025570 | Msa1162520 | 0.808817 | 2.570560e-50 | -8.615850e-47 |
| Msa0027020 | Msa1162520 | -0.830678 | 2.564733e-55 | -8.615850e-47 |
| Msa0042520 | Msa1162520 | -0.819291 | 1.254346e-52 | -8.615850e-47 |
| Msa0046020 | Msa1162520 | -0.800909 | 1.155339e-48 | -8.615850e-47 |
| Msa0047660 | Msa1162520 | -0.812053 | 5.144086e-51 | -8.615850e-47 |
| Msa0060410 | Msa1162520 | 0.825262 | 5.160429e-54 | -8.615850e-47 |
| Msa0065670 | Msa1162520 | -0.823496 | 1.342479e-53 | -8.615850e-47 |
| Msa0070120 | Msa1162520 | 0.812748 | 3.627451e-51 | -8.615850e-47 |
| Msa0072180 | Msa1162520 | 0.816919 | 4.313163e-52 | -8.615850e-47 |
| Msa0073110 | Msa1162520 | 0.820153 | 7.972931e-53 | -8.615850e-47 |
| Msa0074860 | Msa1162520 | -0.801865 | 7.358519e-49 | -8.615850e-47 |
| Msa0075080 | Msa1162520 | -0.806900 | 6.572085e-50 | -8.615850e-47 |
| Msa0075820 | Msa1162520 | -0.800437 | 1.442150e-48 | -8.615850e-47 |
| Msa0085450 | Msa1162520 | 0.804198 | 2.423420e-49 | -8.615850e-47 |
| Msa0093360 | Msa1162520 | -0.801109 | 1.051420e-48 | -8.615850e-47 |
| Msa0094170 | Msa1162520 | -0.812988 | 3.213943e-51 | -8.615850e-47 |
| Msa0095810 | Msa1162520 | -0.814059 | 1.867919e-51 | -8.615850e-47 |
| Msa0111110 | Msa1162520 | -0.825617 | 4.250844e-54 | -8.615850e-47 |
| Msa0112550 | Msa1162520 | -0.805199 | 1.498313e-49 | -8.615850e-47 |
| Msa0116780 | Msa1162520 | -0.802697 | 4.961009e-49 | -8.615850e-47 |
| Msa0117650 | Msa1162520 | 0.801093 | 1.059334e-48 | -8.615850e-47 |
| Msa0120160 | Msa1162520 | -0.802552 | 5.314833e-49 | -8.615850e-47 |
| Msa0603310 | Msa1162520 | 0.802989 | 4.318673e-49 | -8.615850e-47 |
| Msa0606340 | Msa1162520 | -0.817033 | 4.067300e-52 | -8.615850e-47 |
| Msa0606350 | Msa1162520 | -0.825888 | 3.665579e-54 | -8.615850e-47 |
| Msa0615070 | Msa1162520 | 0.807053 | 6.098646e-50 | -8.615850e-47 |
| Msa0622450 | Msa1162520 | -0.809433 | 1.897292e-50 | -8.615850e-47 |
| Msa0628200 | Msa1162520 | 0.806315 | 8.731460e-50 | -8.615850e-47 |
| Msa0654490 | Msa1162520 | -0.803847 | 2.867715e-49 | -8.615850e-47 |
| Msa0657710 | Msa1162520 | 0.803282 | 3.755359e-49 | -8.615850e-47 |
| Msa0675630 | Msa1162520 | 0.800628 | 1.318266e-48 | -8.615850e-47 |
| Msa0682110 | Msa1162520 | 0.809408 | 1.920455e-50 | -8.615850e-47 |
| Msa0682160 | Msa1162520 | 0.820313 | 7.325275e-53 | -8.615850e-47 |
| Msa0690100 | Msa1162520 | -0.807246 | 5.550433e-50 | -8.615850e-47 |
| Msa0695250 | Msa1162520 | -0.819792 | 9.641836e-53 | -8.615850e-47 |
| Msa0702800 | Msa1162520 | 0.804342 | 2.261538e-49 | -8.615850e-47 |
| Msa0719330 | Msa1162520 | -0.801079 | 1.066532e-48 | -8.615850e-47 |
| Msa0725580 | Msa1162520 | 0.808525 | 2.967169e-50 | -8.615850e-47 |
| Msa0729740 | Msa1162520 | -0.806508 | 7.949985e-50 | -8.615850e-47 |
| Msa0739820 | Msa1162520 | -0.812932 | 3.305266e-51 | -8.615850e-47 |
| Msa0753590 | Msa1162520 | -0.806207 | 9.200820e-50 | -8.615850e-47 |
| Msa0758880 | Msa1162520 | -0.804681 | 1.922246e-49 | -8.615850e-47 |
| Msa0784780 | Msa1162520 | -0.827311 | 1.678393e-54 | -8.615850e-47 |
| Msa0792410 | Msa1162520 | 0.800654 | 1.302444e-48 | -8.615850e-47 |
| Msa0795910 | Msa1162520 | -0.806348 | 8.593256e-50 | -8.615850e-47 |
| Msa0801920 | Msa1162520 | -0.809877 | 1.522962e-50 | -8.615850e-47 |
| Msa0820130 | Msa1162520 | -0.818231 | 2.183550e-52 | -8.615850e-47 |
| Msa0828960 | Msa1162520 | 0.802980 | 4.335891e-49 | -8.615850e-47 |
| Msa0829210 | Msa1162520 | -0.816639 | 4.985504e-52 | -8.615850e-47 |
| Msa0829250 | Msa1162520 | -0.829659 | 4.549276e-55 | -8.615850e-47 |
| Msa0833200 | Msa1162520 | -0.801625 | 8.242088e-49 | -8.615850e-47 |
| Msa0833360 | Msa1162520 | -0.804944 | 1.693646e-49 | -8.615850e-47 |
| Msa0838120 | Msa1162520 | -0.811521 | 6.717677e-51 | -8.615850e-47 |
| Msa0127350 | Msa1162520 | -0.805024 | 1.630069e-49 | -8.615850e-47 |
| Msa0141410 | Msa1162520 | 0.804987 | 1.659032e-49 | -8.615850e-47 |
| Msa0151510 | Msa1162520 | -0.820157 | 7.956163e-53 | -8.615850e-47 |
| Msa0151660 | Msa1162520 | 0.821142 | 4.724995e-53 | -8.615850e-47 |
| Msa0167160 | Msa1162520 | -0.824814 | 6.581928e-54 | -8.615850e-47 |
| Msa0167570 | Msa1162520 | -0.837047 | 6.543334e-57 | -8.615850e-47 |
| Msa0168770 | Msa1162520 | -0.817033 | 4.067300e-52 | -8.615850e-47 |
| Msa0185040 | Msa1162520 | 0.817340 | 3.469868e-52 | -8.615850e-47 |
| Msa0211590 | Msa1162520 | -0.816370 | 5.728171e-52 | -8.615850e-47 |
| Msa0212950 | Msa1162520 | -0.800255 | 1.570182e-48 | -8.615850e-47 |
| Msa0225080 | Msa1162520 | -0.802747 | 4.844354e-49 | -8.615850e-47 |
| Msa0225280 | Msa1162520 | -0.803362 | 3.615477e-49 | -8.615850e-47 |
| Msa0225790 | Msa1162520 | -0.816028 | 6.828468e-52 | -8.615850e-47 |
| Msa0368450 | Msa1162520 | -0.802385 | 5.753387e-49 | -8.615850e-47 |
| Msa0369080 | Msa1162520 | -0.809775 | 1.601442e-50 | -8.615850e-47 |
| Msa0380470 | Msa1162520 | -0.803968 | 2.705840e-49 | -8.615850e-47 |
| Msa0382050 | Msa1162520 | -0.813085 | 3.059493e-51 | -8.615850e-47 |
| Msa0386230 | Msa1162520 | -0.821472 | 3.964401e-53 | -8.615850e-47 |
| Msa0397420 | Msa1162520 | -0.804018 | 2.641539e-49 | -8.615850e-47 |
| Msa0416430 | Msa1162520 | -0.804353 | 2.249852e-49 | -8.615850e-47 |
| Msa0417790 | Msa1162520 | -0.810616 | 1.055182e-50 | -8.615850e-47 |
| Msa0419150 | Msa1162520 | -0.808172 | 3.528574e-50 | -8.615850e-47 |
| Msa0428270 | Msa1162520 | -0.817971 | 2.499719e-52 | -8.615850e-47 |
| Msa0436660 | Msa1162520 | -0.817465 | 3.252224e-52 | -8.615850e-47 |
| Msa0437820 | Msa1162520 | -0.802309 | 5.962912e-49 | -8.615850e-47 |
| Msa0444770 | Msa1162520 | -0.825924 | 3.595867e-54 | -8.615850e-47 |
| Msa0454770 | Msa1162520 | 0.812224 | 4.721571e-51 | -8.615850e-47 |
| Msa0461620 | Msa1162520 | -0.812884 | 3.386074e-51 | -8.615850e-47 |
| Msa0463030 | Msa1162520 | -0.805348 | 1.394044e-49 | -8.615850e-47 |
| Msa0464980 | Msa1162520 | -0.802958 | 4.381120e-49 | -8.615850e-47 |
| Msa0469770 | Msa1162520 | -0.823497 | 1.341730e-53 | -8.615850e-47 |
| Msa0473740 | Msa1162520 | -0.800087 | 1.698538e-48 | -8.615850e-47 |
| Msa0474630 | Msa1162520 | -0.808100 | 3.655716e-50 | -8.615850e-47 |
| Msa0474660 | Msa1162520 | -0.832478 | 9.241380e-56 | -8.615850e-47 |
| Msa0476890 | Msa1162520 | -0.819874 | 9.235230e-53 | -8.615850e-47 |
| Msa1001120 | Msa1162520 | 0.819838 | 9.411960e-53 | -8.615850e-47 |
| Msa1002550 | Msa1162520 | -0.818933 | 1.513325e-52 | -8.615850e-47 |
| Msa1019420 | Msa1162520 | 0.809710 | 1.653873e-50 | -8.615850e-47 |
| Msa1020160 | Msa1162520 | -0.804719 | 1.887251e-49 | -8.615850e-47 |
| Msa1028890 | Msa1162520 | -0.813650 | 2.299502e-51 | -8.615850e-47 |
| Msa1031190 | Msa1162520 | -0.824871 | 6.380511e-54 | -8.615850e-47 |
| Msa1035190 | Msa1162520 | 0.930518 | 1.457876e-93 | -8.615850e-47 |
| Msa1044050 | Msa1162520 | -0.804392 | 2.208434e-49 | -8.615850e-47 |
| Msa1058550 | Msa1162520 | -0.801784 | 7.647940e-49 | -8.615850e-47 |
| Msa1062060 | Msa1162520 | 0.805955 | 1.039883e-49 | -8.615850e-47 |
| Msa1068010 | Msa1162520 | -0.809728 | 1.638999e-50 | -8.615850e-47 |
| Msa1070370 | Msa1162520 | -0.824060 | 9.900720e-54 | -8.615850e-47 |
| Msa1075190 | Msa1162520 | 0.856152 | 3.903815e-62 | -8.615850e-47 |
| Msa1092310 | Msa1162520 | 0.800064 | 1.717253e-48 | -8.615850e-47 |
| Msa0241750 | Msa1162520 | 0.830103 | 3.545758e-55 | -8.615850e-47 |
| Msa0253230 | Msa1162520 | -0.811549 | 6.624340e-51 | -8.615850e-47 |
| Msa0260580 | Msa1162520 | -0.815675 | 8.186156e-52 | -8.615850e-47 |
| Msa0260640 | Msa1162520 | -0.811169 | 8.009096e-51 | -8.615850e-47 |
| Msa0261350 | Msa1162520 | -0.827872 | 1.230365e-54 | -8.615850e-47 |
| Msa0262350 | Msa1162520 | -0.800328 | 1.517143e-48 | -8.615850e-47 |
| Msa0266150 | Msa1162520 | -0.802198 | 6.285599e-49 | -8.615850e-47 |
| Msa0266330 | Msa1162520 | -0.807517 | 4.863695e-50 | -8.615850e-47 |
| Msa0268660 | Msa1162520 | -0.800941 | 1.138017e-48 | -8.615850e-47 |
| Msa0298000 | Msa1162520 | 0.812502 | 4.105518e-51 | -8.615850e-47 |
| Msa0298820 | Msa1162520 | -0.806628 | 7.500941e-50 | -8.615850e-47 |
| Msa0299130 | Msa1162520 | -0.823220 | 1.557704e-53 | -8.615850e-47 |
| Msa0307630 | Msa1162520 | 0.802804 | 4.714770e-49 | -8.615850e-47 |
| Msa0310270 | Msa1162520 | -0.806132 | 9.540508e-50 | -8.615850e-47 |
| Msa0319220 | Msa1162520 | 0.801005 | 1.104040e-48 | -8.615850e-47 |
| Msa0333770 | Msa1162520 | 0.818281 | 2.127854e-52 | -8.615850e-47 |
| Msa0340700 | Msa1162520 | -0.837678 | 4.511330e-57 | -8.615850e-47 |
| Msa0341950 | Msa1162520 | -0.808436 | 3.100646e-50 | -8.615850e-47 |
| Msa0345050 | Msa1162520 | 0.826000 | 3.448061e-54 | -8.615850e-47 |
| Msa0354600 | Msa1162520 | 0.805878 | 1.079341e-49 | -8.615850e-47 |
| Msa0357310 | Msa1162520 | 0.805975 | 1.029817e-49 | -8.615850e-47 |
| Msa1107220 | Msa1162520 | 0.803339 | 3.654630e-49 | -8.615850e-47 |
| Msa1114670 | Msa1162520 | 0.810617 | 1.054702e-50 | -8.615850e-47 |
| Msa1116090 | Msa1162520 | 0.929389 | 7.454466e-93 | -8.615850e-47 |
| Msa1119420 | Msa1162520 | -0.823792 | 1.144581e-53 | -8.615850e-47 |
| Msa1121720 | Msa1162520 | -0.809743 | 1.627432e-50 | -8.615850e-47 |
| Msa1126320 | Msa1162520 | -0.807763 | 4.311499e-50 | -8.615850e-47 |
| Msa1129120 | Msa1162520 | -0.825211 | 5.305812e-54 | -8.615850e-47 |
| Msa1130150 | Msa1162520 | -0.827015 | 1.975791e-54 | -8.615850e-47 |
| Msa1132880 | Msa1162520 | -0.807120 | 5.902975e-50 | -8.615850e-47 |
| Msa1136760 | Msa1162520 | 0.827874 | 1.229015e-54 | -8.615850e-47 |
| Msa1154060 | Msa1162520 | 0.813746 | 2.189380e-51 | -8.615850e-47 |
| Msa1156100 | Msa1162520 | -0.808221 | 3.445048e-50 | -8.615850e-47 |
| Msa1156120 | Msa1162520 | -0.814637 | 1.392297e-51 | -8.615850e-47 |
| Msa1158180 | Msa1162520 | -0.824083 | 9.779679e-54 | -8.615850e-47 |
| Msa1162520 | Msa1167310 | 0.807883 | 4.066145e-50 | -8.615850e-47 |
| Msa1162520 | Msa1174280 | 0.802114 | 6.541581e-49 | -8.615850e-47 |
| Msa1162520 | Msa1185270 | 0.805554 | 1.261990e-49 | -8.615850e-47 |
| Msa1162520 | Msa1199540 | -0.810290 | 1.240469e-50 | -8.615850e-47 |
| Msa1162520 | Msa1202110 | 0.800579 | 1.349105e-48 | -8.615850e-47 |
| Msa1162520 | Msa1202800 | 0.811251 | 7.685103e-51 | -8.615850e-47 |
| Msa1162520 | Msa1203320 | -0.810663 | 1.030674e-50 | -8.615850e-47 |
| Msa1162520 | Msa1212150 | -0.800434 | 1.443911e-48 | -8.615850e-47 |
| Msa1162520 | Msa1221270 | 0.808212 | 3.461326e-50 | -8.615850e-47 |
| Msa1162520 | Msa1228260 | -0.800786 | 1.223691e-48 | -8.615850e-47 |
| Msa1162520 | Msa1235620 | -0.804302 | 2.305977e-49 | -8.615850e-47 |
| Msa1162520 | Msa1239210 | 0.818915 | 1.527608e-52 | -8.615850e-47 |
| Msa1162520 | Msa1254870 | 0.800871 | 1.176003e-48 | -8.615850e-47 |
| Msa1162520 | Msa1255210 | 0.808403 | 3.151408e-50 | -8.615850e-47 |
| Msa1162520 | Msa1266750 | -0.816119 | 6.517051e-52 | -8.615850e-47 |
| Msa1162520 | Msa1268360 | 0.807279 | 5.462967e-50 | -8.615850e-47 |
| Msa1162520 | Msa1271220 | -0.801276 | 9.718179e-49 | -8.615850e-47 |
| Msa1162520 | Msa1273320 | 0.805209 | 1.490625e-49 | -8.615850e-47 |
| Msa1162520 | Msa1279200 | -0.807467 | 4.984314e-50 | -8.615850e-47 |
| Msa1162520 | Msa1295480 | -0.802124 | 6.510246e-49 | -8.615850e-47 |
| Msa1162520 | Msa1295650 | 0.802199 | 6.282776e-49 | -8.615850e-47 |
| Msa1162520 | Msa1303690 | -0.820852 | 5.511401e-53 | -8.615850e-47 |
| Msa1162520 | Msa1328430 | 0.804132 | 2.502039e-49 | -8.615850e-47 |
| Msa1162520 | Msa1328680 | -0.806496 | 7.998117e-50 | -8.615850e-47 |
| Msa1162520 | Msa1341710 | -0.826581 | 2.508030e-54 | -8.615850e-47 |
| Msa1162520 | Msa1350130 | -0.800135 | 1.661204e-48 | -8.615850e-47 |
| Msa1162520 | Msa1350590 | -0.816574 | 5.155857e-52 | -8.615850e-47 |
| Msa1162520 | Msa1356100 | -0.809224 | 2.103321e-50 | -8.615850e-47 |
| Msa1162520 | Msa1363170 | -0.819818 | 9.510018e-53 | -8.615850e-47 |
| Msa1162520 | Msa1372460 | -0.806329 | 8.671058e-50 | -8.615850e-47 |
| Msa1162520 | Msa1373420 | -0.800002 | 1.767624e-48 | -8.615850e-47 |
| Msa1162520 | Msa1386910 | -0.801852 | 7.406191e-49 | -8.615850e-47 |
| Msa1162520 | Msa1388720 | -0.824984 | 6.003276e-54 | -8.615850e-47 |
| Msa1162520 | Msa1398140 | 0.807487 | 4.934604e-50 | -8.615850e-47 |
| Msa1162520 | Msa1407810 | 0.800868 | 1.177453e-48 | -8.615850e-47 |
| Msa1162520 | Msa1408230 | -0.831235 | 1.872651e-55 | -8.615850e-47 |
| Msa1162520 | Msa1410480 | -0.809639 | 1.712880e-50 | -8.615850e-47 |
| Msa1162520 | Msa1410500 | -0.805519 | 1.283578e-49 | -8.615850e-47 |
| Msa1162520 | Msa1412330 | -0.801150 | 1.031330e-48 | -8.615850e-47 |
| Msa1162520 | Msa1415510 | -0.816827 | 4.524676e-52 | -8.615850e-47 |
| Msa1162520 | Msa1432730 | -0.817393 | 3.374710e-52 | -8.615850e-47 |
| Msa1162520 | Msa1433360 | 0.806553 | 7.778883e-50 | -8.615850e-47 |
| Msa1162520 | Msa1434860 | -0.801629 | 8.229442e-49 | -8.615850e-47 |
| Msa1162520 | Msa1437780 | 0.802217 | 6.229684e-49 | -8.615850e-47 |
| Msa1162520 | Msa1444130 | -0.802720 | 4.907644e-49 | -8.615850e-47 |
| Msa1162520 | Msa1455200 | 0.827681 | 1.367989e-54 | -8.615850e-47 |
| Msa1162520 | Msa1462610 | 0.802580 | 5.245026e-49 | -8.615850e-47 |
| Msa1162520 | Msa1462700 | -0.815674 | 8.191620e-52 | -8.615850e-47 |
| Msa0490740 | Msa1162520 | -0.806848 | 6.740398e-50 | -8.615850e-47 |
| Msa0492330 | Msa1162520 | -0.824237 | 9.000835e-54 | -8.615850e-47 |
| Msa0500580 | Msa1162520 | -0.808981 | 2.370857e-50 | -8.615850e-47 |
| Msa0506700 | Msa1162520 | -0.818629 | 1.774356e-52 | -8.615850e-47 |
| Msa0507960 | Msa1162520 | -0.810219 | 1.284908e-50 | -8.615850e-47 |
| Msa0531050 | Msa1162520 | 0.817143 | 3.842360e-52 | -8.615850e-47 |
| Msa0550980 | Msa1162520 | -0.808797 | 2.595550e-50 | -8.615850e-47 |
| Msa0550990 | Msa1162520 | -0.825638 | 4.202835e-54 | -8.615850e-47 |
| Msa0557440 | Msa1162520 | -0.809484 | 1.849726e-50 | -8.615850e-47 |
| Msa0560950 | Msa1162520 | 0.827101 | 1.883787e-54 | -8.615850e-47 |
| Msa0565430 | Msa1162520 | -0.809331 | 1.994799e-50 | -8.615850e-47 |
| Msa0566280 | Msa1162520 | 0.804291 | 2.317610e-49 | -8.615850e-47 |
| Msa0567330 | Msa1162520 | 0.805061 | 1.601228e-49 | -8.615850e-47 |
| Msa0580410 | Msa1162520 | -0.806688 | 7.284040e-50 | -8.615850e-47 |
| Msa0580890 | Msa1162520 | -0.831879 | 1.299748e-55 | -8.615850e-47 |
| Msa0581350 | Msa1162520 | 0.814981 | 1.168185e-51 | -8.615850e-47 |
| Msa0583270 | Msa1162520 | -0.811352 | 7.308585e-51 | -8.615850e-47 |
| Msa0590620 | Msa1162520 | -0.808458 | 3.067147e-50 | -8.615850e-47 |
| Msa0597370 | Msa1162520 | -0.816112 | 6.542345e-52 | -8.615850e-47 |
| Msa0853200 | Msa1162520 | -0.804510 | 2.086841e-49 | -8.615850e-47 |
| Msa0858250 | Msa1162520 | -0.829333 | 5.458137e-55 | -8.615850e-47 |
| Msa0868500 | Msa1162520 | -0.816447 | 5.504242e-52 | -8.615850e-47 |
| Msa0868510 | Msa1162520 | -0.815288 | 9.981248e-52 | -8.615850e-47 |
| Msa0868520 | Msa1162520 | -0.806179 | 9.326412e-50 | -8.615850e-47 |
| Msa0869420 | Msa1162520 | -0.802285 | 6.031530e-49 | -8.615850e-47 |
| Msa0873910 | Msa1162520 | 0.840559 | 8.084090e-58 | -8.615850e-47 |
| Msa0882480 | Msa1162520 | -0.831472 | 1.637631e-55 | -8.615850e-47 |
| Msa0896930 | Msa1162520 | 0.806482 | 8.053344e-50 | -8.615850e-47 |
| Msa0906660 | Msa1162520 | 0.840986 | 6.245929e-58 | -8.615850e-47 |
| Msa0925940 | Msa1162520 | 0.829968 | 3.823953e-55 | -8.615850e-47 |
| Msa0941410 | Msa1162520 | -0.806542 | 7.820456e-50 | -8.615850e-47 |
| Msa0941420 | Msa1162520 | -0.808021 | 3.800684e-50 | -8.615850e-47 |
| Msa0945160 | Msa1162520 | -0.816561 | 5.190562e-52 | -8.615850e-47 |
| Msa0958960 | Msa1162520 | -0.811805 | 5.824733e-51 | -8.615850e-47 |
| Msa0966580 | Msa1162520 | 0.806082 | 9.774636e-50 | -8.615850e-47 |
| Msa0975960 | Msa1162520 | 0.807032 | 6.160506e-50 | -8.615850e-47 |
| Msa0978540 | Msa1162520 | -0.816418 | 5.586013e-52 | -8.615850e-47 |
| Msa0978550 | Msa1162520 | -0.818696 | 1.712752e-52 | -8.615850e-47 |
| Msa0978560 | Msa1162520 | -0.806403 | 8.367259e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162520 | MtrunA17_Chr7g0258551 | 96.053 | 380 | 9 | 1 | 1 | 380 | 1 | 374 | 0.0 | 749 |
| Msa1162520 | MtrunA17_Chr1g0175091 | 61.560 | 359 | 114 | 8 | 31 | 379 | 78 | 422 | 5.23e-140 | 405 |
| Msa1162520 | MtrunA17_Chr7g0261911 | 53.659 | 164 | 75 | 1 | 209 | 371 | 253 | 416 | 1.44e-57 | 195 |
| Msa1162520 | MtrunA17_Chr1g0190301 | 57.042 | 142 | 60 | 1 | 209 | 349 | 166 | 307 | 4.50e-51 | 175 |
| Msa1162520 | MtrunA17_Chr7g0274471 | 53.147 | 143 | 66 | 1 | 217 | 358 | 217 | 359 | 1.11e-47 | 167 |
| Msa1162520 | MtrunA17_Chr2g0291021 | 51.724 | 145 | 67 | 2 | 218 | 359 | 49 | 193 | 2.29e-46 | 161 |
| Msa1162520 | MtrunA17_Chr7g0254981 | 48.592 | 142 | 69 | 1 | 216 | 353 | 48 | 189 | 1.01e-44 | 155 |
| Msa1162520 | MtrunA17_Chr6g0461641 | 45.395 | 152 | 64 | 3 | 217 | 350 | 41 | 191 | 1.09e-36 | 137 |
| Msa1162520 | MtrunA17_Chr7g0242521 | 46.809 | 141 | 71 | 2 | 205 | 342 | 1 | 140 | 4.67e-36 | 131 |
| Msa1162520 | MtrunA17_Chr2g0321461 | 44.767 | 172 | 71 | 5 | 201 | 349 | 27 | 197 | 1.58e-35 | 134 |
| Msa1162520 | MtrunA17_Chr1g0175071 | 50.350 | 143 | 70 | 1 | 207 | 348 | 165 | 307 | 4.02e-35 | 131 |
| Msa1162520 | MtrunA17_Chr1g0175081 | 63.529 | 85 | 31 | 0 | 198 | 282 | 2 | 86 | 2.38e-31 | 114 |
| Msa1162520 | MtrunA17_Chr5g0417521 | 34.395 | 157 | 90 | 1 | 217 | 360 | 14 | 170 | 3.50e-30 | 119 |
| Msa1162520 | MtrunA17_Chr5g0409731 | 41.781 | 146 | 72 | 4 | 218 | 350 | 25 | 170 | 3.55e-30 | 117 |
| Msa1162520 | MtrunA17_Chr8g0356501 | 40.816 | 147 | 77 | 4 | 211 | 349 | 28 | 172 | 3.33e-29 | 115 |
| Msa1162520 | MtrunA17_Chr4g0042451 | 36.054 | 147 | 78 | 2 | 217 | 349 | 16 | 160 | 1.14e-28 | 114 |
| Msa1162520 | MtrunA17_Chr2g0310011 | 40.000 | 155 | 83 | 4 | 211 | 357 | 26 | 178 | 4.42e-28 | 112 |
| Msa1162520 | MtrunA17_Chr2g0290991 | 37.888 | 161 | 86 | 3 | 218 | 365 | 39 | 198 | 1.06e-27 | 111 |
| Msa1162520 | MtrunA17_Chr1g0197171 | 33.889 | 180 | 98 | 4 | 218 | 382 | 44 | 217 | 1.28e-25 | 105 |
| Msa1162520 | MtrunA17_Chr7g0258531 | 43.056 | 144 | 78 | 2 | 208 | 349 | 203 | 344 | 4.94e-25 | 104 |
| Msa1162520 | MtrunA17_Chr3g0109981 | 48.837 | 86 | 41 | 2 | 220 | 303 | 276 | 360 | 4.50e-18 | 85.5 |
| Msa1162520 | MtrunA17_Chr7g0243081 | 49.367 | 79 | 39 | 1 | 214 | 292 | 67 | 144 | 7.54e-18 | 84.0 |
| Msa1162520 | MtrunA17_Chr8g0366281 | 54.412 | 68 | 29 | 1 | 220 | 285 | 175 | 242 | 1.59e-17 | 83.2 |
| Msa1162520 | MtrunA17_Chr2g0320231 | 36.364 | 176 | 91 | 6 | 140 | 302 | 26 | 193 | 1.71e-17 | 83.2 |
| Msa1162520 | MtrunA17_Chr8g0379121 | 56.452 | 62 | 27 | 0 | 214 | 275 | 107 | 168 | 5.81e-17 | 82.0 |
| Msa1162520 | MtrunA17_Chr6g0479431 | 60.000 | 55 | 22 | 0 | 220 | 274 | 204 | 258 | 4.17e-16 | 79.0 |
| Msa1162520 | MtrunA17_Chr2g0288601 | 53.846 | 65 | 30 | 0 | 204 | 268 | 57 | 121 | 4.47e-16 | 74.3 |
| Msa1162520 | MtrunA17_Chr1g0210911 | 50.000 | 78 | 35 | 2 | 201 | 274 | 1 | 78 | 4.98e-16 | 78.6 |
| Msa1162520 | MtrunA17_Chr5g0410741 | 60.000 | 55 | 22 | 0 | 220 | 274 | 221 | 275 | 6.35e-16 | 78.6 |
| Msa1162520 | MtrunA17_Chr3g0095611 | 55.932 | 59 | 26 | 0 | 216 | 274 | 17 | 75 | 6.37e-16 | 75.9 |
| Msa1162520 | MtrunA17_Chr1g0154261 | 53.968 | 63 | 29 | 0 | 220 | 282 | 128 | 190 | 7.89e-16 | 77.4 |
| Msa1162520 | MtrunA17_Chr1g0162931 | 55.738 | 61 | 27 | 0 | 214 | 274 | 14 | 74 | 1.21e-15 | 76.6 |
| Msa1162520 | MtrunA17_Chr2g0283951 | 51.515 | 66 | 28 | 1 | 214 | 275 | 85 | 150 | 8.93e-14 | 72.0 |
| Msa1162520 | MtrunA17_Chr7g0275401 | 55.000 | 60 | 26 | 1 | 212 | 271 | 186 | 244 | 9.06e-13 | 68.2 |
| Msa1162520 | MtrunA17_Chr4g0009901 | 51.786 | 56 | 26 | 1 | 216 | 271 | 166 | 220 | 5.85e-12 | 65.5 |
| Msa1162520 | MtrunA17_Chr4g0062921 | 49.231 | 65 | 33 | 0 | 207 | 271 | 224 | 288 | 1.02e-11 | 66.2 |
| Msa1162520 | MtrunA17_Chr1g0198601 | 37.755 | 98 | 46 | 1 | 202 | 284 | 180 | 277 | 3.56e-11 | 64.3 |
| Msa1162520 | MtrunA17_Chr4g0009981 | 46.774 | 62 | 32 | 1 | 210 | 271 | 108 | 168 | 7.07e-11 | 62.4 |
| Msa1162520 | MtrunA17_Chr5g0402631 | 53.571 | 56 | 26 | 0 | 216 | 271 | 212 | 267 | 9.41e-11 | 62.8 |
| Msa1162520 | MtrunA17_Chr4g0045361 | 50.877 | 57 | 28 | 0 | 215 | 271 | 271 | 327 | 9.41e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162520 | AT5G06800.1 | 55.042 | 238 | 91 | 6 | 149 | 382 | 120 | 345 | 1.08e-68 | 221 |
| Msa1162520 | AT5G06800.2 | 53.909 | 243 | 91 | 7 | 149 | 382 | 120 | 350 | 2.81e-66 | 215 |
| Msa1162520 | AT5G29000.1 | 53.947 | 152 | 66 | 1 | 205 | 352 | 175 | 326 | 1.47e-52 | 179 |
| Msa1162520 | AT5G29000.3 | 53.947 | 152 | 66 | 1 | 205 | 352 | 175 | 326 | 1.47e-52 | 179 |
| Msa1162520 | AT5G29000.2 | 53.947 | 152 | 66 | 1 | 205 | 352 | 218 | 369 | 2.89e-52 | 179 |
| Msa1162520 | AT3G04450.4 | 45.055 | 182 | 89 | 3 | 175 | 352 | 162 | 336 | 1.16e-49 | 172 |
| Msa1162520 | AT3G04450.2 | 45.055 | 182 | 89 | 3 | 175 | 352 | 162 | 336 | 1.16e-49 | 172 |
| Msa1162520 | AT3G04450.1 | 45.055 | 182 | 89 | 3 | 175 | 352 | 202 | 376 | 2.58e-49 | 172 |
| Msa1162520 | AT4G28610.1 | 54.861 | 144 | 63 | 1 | 205 | 346 | 212 | 355 | 1.09e-48 | 170 |
| Msa1162520 | AT2G01060.1 | 50.331 | 151 | 73 | 2 | 216 | 364 | 13 | 163 | 1.91e-47 | 163 |
| Msa1162520 | AT3G13040.3 | 45.810 | 179 | 88 | 4 | 191 | 360 | 211 | 389 | 2.53e-44 | 159 |
| Msa1162520 | AT3G13040.1 | 45.810 | 179 | 88 | 4 | 191 | 360 | 211 | 389 | 2.53e-44 | 159 |
| Msa1162520 | AT3G13040.2 | 45.810 | 179 | 88 | 4 | 191 | 360 | 211 | 389 | 2.53e-44 | 159 |
| Msa1162520 | AT2G20400.1 | 53.077 | 130 | 60 | 1 | 218 | 346 | 231 | 360 | 1.04e-41 | 151 |
| Msa1162520 | AT2G20400.2 | 53.435 | 131 | 59 | 2 | 218 | 346 | 231 | 361 | 3.39e-40 | 147 |
| Msa1162520 | AT3G04030.3 | 45.963 | 161 | 69 | 3 | 207 | 349 | 32 | 192 | 1.11e-37 | 140 |
| Msa1162520 | AT5G06800.3 | 56.081 | 148 | 58 | 6 | 141 | 282 | 110 | 256 | 5.39e-37 | 135 |
| Msa1162520 | AT5G18240.1 | 44.720 | 161 | 71 | 3 | 208 | 350 | 33 | 193 | 1.70e-36 | 137 |
| Msa1162520 | AT5G18240.4 | 44.720 | 161 | 71 | 3 | 208 | 350 | 33 | 193 | 1.70e-36 | 137 |
| Msa1162520 | AT3G04030.2 | 44.720 | 161 | 70 | 4 | 207 | 349 | 32 | 191 | 1.10e-34 | 132 |
| Msa1162520 | AT3G24120.1 | 41.667 | 156 | 71 | 2 | 218 | 353 | 41 | 196 | 1.94e-34 | 129 |
| Msa1162520 | AT1G69580.1 | 42.581 | 155 | 63 | 3 | 217 | 349 | 33 | 183 | 6.17e-34 | 129 |
| Msa1162520 | AT5G18240.5 | 44.099 | 161 | 70 | 4 | 208 | 350 | 33 | 191 | 1.83e-33 | 129 |
| Msa1162520 | AT1G69580.2 | 41.667 | 156 | 64 | 3 | 217 | 349 | 33 | 184 | 5.64e-33 | 126 |
| Msa1162520 | AT4G13640.1 | 40.940 | 149 | 72 | 2 | 218 | 353 | 37 | 182 | 1.65e-32 | 124 |
| Msa1162520 | AT3G04030.1 | 43.478 | 161 | 67 | 4 | 207 | 349 | 32 | 186 | 1.87e-32 | 126 |
| Msa1162520 | AT3G24120.2 | 40.881 | 159 | 71 | 3 | 218 | 353 | 41 | 199 | 2.10e-32 | 124 |
| Msa1162520 | AT5G45580.1 | 40.606 | 165 | 67 | 5 | 218 | 356 | 7 | 166 | 3.18e-32 | 122 |
| Msa1162520 | AT5G45580.2 | 40.606 | 165 | 67 | 5 | 218 | 356 | 23 | 182 | 3.23e-32 | 123 |
| Msa1162520 | AT1G79430.2 | 43.333 | 150 | 74 | 5 | 211 | 353 | 25 | 170 | 3.35e-32 | 124 |
| Msa1162520 | AT5G18240.2 | 42.236 | 161 | 69 | 4 | 208 | 350 | 33 | 187 | 3.20e-31 | 122 |
| Msa1162520 | AT5G18240.3 | 42.236 | 161 | 69 | 4 | 208 | 350 | 33 | 187 | 3.20e-31 | 122 |
| Msa1162520 | AT4G13640.2 | 40.132 | 152 | 72 | 3 | 218 | 353 | 37 | 185 | 1.71e-30 | 118 |
| Msa1162520 | AT2G01060.2 | 49.123 | 114 | 56 | 2 | 253 | 364 | 1 | 114 | 8.02e-29 | 112 |
| Msa1162520 | AT5G29000.4 | 57.955 | 88 | 35 | 1 | 205 | 290 | 218 | 305 | 3.19e-28 | 112 |
| Msa1162520 | AT3G04450.3 | 46.154 | 104 | 49 | 2 | 175 | 278 | 202 | 298 | 5.37e-26 | 107 |
| Msa1162520 | AT3G12730.1 | 38.562 | 153 | 81 | 5 | 209 | 349 | 12 | 163 | 3.37e-25 | 102 |
| Msa1162520 | AT2G42660.1 | 55.072 | 69 | 31 | 0 | 214 | 282 | 46 | 114 | 3.86e-19 | 86.7 |
| Msa1162520 | AT3G04030.5 | 41.379 | 116 | 52 | 2 | 250 | 349 | 1 | 116 | 3.00e-18 | 85.1 |
| Msa1162520 | AT4G04605.1 | 50.000 | 78 | 36 | 1 | 214 | 288 | 10 | 87 | 6.65e-17 | 79.3 |
| Msa1162520 | AT2G38300.1 | 58.065 | 62 | 26 | 0 | 214 | 275 | 50 | 111 | 9.08e-17 | 81.3 |
| Msa1162520 | AT4G17695.1 | 54.412 | 68 | 29 | 1 | 220 | 285 | 166 | 233 | 1.03e-16 | 80.9 |
| Msa1162520 | AT2G02060.2 | 63.793 | 58 | 21 | 0 | 214 | 271 | 25 | 82 | 1.47e-16 | 79.3 |
| Msa1162520 | AT2G02060.1 | 63.793 | 58 | 21 | 0 | 214 | 271 | 25 | 82 | 1.47e-16 | 79.3 |
| Msa1162520 | AT1G14600.1 | 58.065 | 62 | 26 | 0 | 214 | 275 | 19 | 80 | 2.13e-16 | 78.6 |
| Msa1162520 | AT1G32240.2 | 54.412 | 68 | 29 | 1 | 220 | 285 | 215 | 282 | 2.13e-16 | 80.1 |
| Msa1162520 | AT1G32240.1 | 54.412 | 68 | 29 | 1 | 220 | 285 | 215 | 282 | 2.77e-16 | 80.1 |
| Msa1162520 | AT5G16560.1 | 60.000 | 55 | 22 | 0 | 220 | 274 | 221 | 275 | 6.74e-16 | 79.0 |
| Msa1162520 | AT1G79430.1 | 38.532 | 109 | 58 | 4 | 250 | 353 | 1 | 105 | 9.66e-16 | 77.4 |
| Msa1162520 | AT5G42630.2 | 51.562 | 64 | 31 | 0 | 220 | 283 | 107 | 170 | 3.01e-15 | 74.7 |
| Msa1162520 | AT2G06020.1 | 54.386 | 57 | 26 | 0 | 218 | 274 | 86 | 142 | 3.90e-15 | 75.9 |
| Msa1162520 | AT5G42630.1 | 51.562 | 64 | 31 | 0 | 220 | 283 | 107 | 170 | 4.91e-15 | 75.1 |
| Msa1162520 | AT2G40260.1 | 57.627 | 59 | 24 | 1 | 217 | 274 | 80 | 138 | 1.13e-14 | 75.5 |
| Msa1162520 | AT4G04580.1 | 50.820 | 61 | 30 | 0 | 214 | 274 | 10 | 70 | 6.02e-14 | 69.7 |
| Msa1162520 | AT3G04030.4 | 37.931 | 116 | 50 | 3 | 250 | 349 | 1 | 110 | 1.90e-13 | 70.9 |
| Msa1162520 | AT4G04555.1 | 51.471 | 68 | 28 | 1 | 212 | 274 | 3 | 70 | 2.86e-13 | 66.2 |
| Msa1162520 | AT4G37180.1 | 50.000 | 64 | 32 | 0 | 208 | 271 | 200 | 263 | 7.02e-13 | 69.7 |
| Msa1162520 | AT4G37180.2 | 50.000 | 64 | 32 | 0 | 208 | 271 | 207 | 270 | 9.00e-13 | 69.3 |
| Msa1162520 | AT5G18240.6 | 35.897 | 117 | 53 | 3 | 250 | 350 | 1 | 111 | 2.19e-12 | 67.8 |
| Msa1162520 | AT2G40970.1 | 46.053 | 76 | 38 | 2 | 198 | 271 | 83 | 157 | 1.26e-11 | 64.7 |
| Msa1162520 | AT2G03500.1 | 49.254 | 67 | 31 | 1 | 205 | 271 | 223 | 286 | 3.27e-11 | 65.1 |
Find 58 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATCATCATTGATTGTATT+TGG | 0.171800 | 7_4:+53260786 | None:intergenic |
| AAGGGAAAACAATCATTTAT+TGG | 0.215858 | 7_4:-53262755 | Msa1162520:CDS |
| TCCCTTTGTGTCAATCTCTA+AGG | 0.220544 | 7_4:-53262774 | Msa1162520:CDS |
| TGATTCTCCTTCTTCAACTA+TGG | 0.222200 | 7_4:+53262957 | None:intergenic |
| TATCATCATTGATTGTATTT+GGG | 0.253089 | 7_4:+53260787 | None:intergenic |
| CAGCAAAAGTTGTTCTTTGA+TGG | 0.257577 | 7_4:-53262574 | Msa1162520:CDS |
| ATCATATAAGGTTAATGATT+TGG | 0.267300 | 7_4:-53262800 | Msa1162520:CDS |
| GTGTTTGTATTACATGATTT+TGG | 0.272236 | 7_4:+53262934 | None:intergenic |
| ATCATCTTCAATATAGCTTT+TGG | 0.290192 | 7_4:+53261860 | None:intergenic |
| TTTGAGTTCTCAATCATATA+AGG | 0.290541 | 7_4:-53262812 | Msa1162520:CDS |
| ATGAATCAAATTTGGAATAT+AGG | 0.310941 | 7_4:-53263003 | Msa1162520:CDS |
| CATGCTGCACATCATCTATA+TGG | 0.344546 | 7_4:+53261349 | None:intergenic |
| AAACTTCCTGCTGAAATTGT+TGG | 0.389210 | 7_4:+53262103 | None:intergenic |
| TTGAGTGTGTGAATCGCCTT+GGG | 0.396796 | 7_4:-53261988 | Msa1162520:CDS |
| GGAAGTTTATCAACTTCTCT+TGG | 0.397953 | 7_4:-53262088 | Msa1162520:CDS |
| GTGTTAGACAGTTCAAAGTT+GGG | 0.442345 | 7_4:+53262712 | None:intergenic |
| GTCTAACACTTTGCAAGCAT+TGG | 0.457506 | 7_4:-53262698 | Msa1162520:CDS |
| TAATGGAAATCATGACTGTA+TGG | 0.457591 | 7_4:-53262515 | Msa1162520:intron |
| GTTGAGTGTGTGAATCGCCT+TGG | 0.458117 | 7_4:-53261989 | Msa1162520:CDS |
| AGTGTTAGACAGTTCAAAGT+TGG | 0.458507 | 7_4:+53262711 | None:intergenic |
| CAAGTAAAACAAGAATTAGA+TGG | 0.463217 | 7_4:-53262036 | Msa1162520:CDS |
| TTGCAGTGGCTTTCAAATCA+AGG | 0.468098 | 7_4:-53261172 | Msa1162520:intron |
| AAAAGCTATATTGAAGATGA+TGG | 0.473225 | 7_4:-53261858 | Msa1162520:CDS |
| CCCTTAGAGATTGACACAAA+GGG | 0.473466 | 7_4:+53262773 | None:intergenic |
| AAGATTGATTATTATCAACT+TGG | 0.481452 | 7_4:+53262833 | None:intergenic |
| ATCATCATTGATTGTATTTG+GGG | 0.485980 | 7_4:+53260788 | None:intergenic |
| AACAAGAATTAGATGGACTA+AGG | 0.489147 | 7_4:-53262029 | Msa1162520:CDS |
| TTGGTGAAATCTCAATTGAA+TGG | 0.505462 | 7_4:-53262679 | Msa1162520:CDS |
| GTTCAAAGTTGGGGTCATGC+TGG | 0.509873 | 7_4:+53262722 | None:intergenic |
| CCCTTTGTGTCAATCTCTAA+GGG | 0.510278 | 7_4:-53262773 | Msa1162520:CDS |
| CTTGGAAGCACTTCTTCTAG+TGG | 0.515481 | 7_4:-53262070 | Msa1162520:CDS |
| GTTGAGGTTTCTATTTCTGA+AGG | 0.516998 | 7_4:-53260744 | Msa1162520:CDS |
| TTGAGGTTTCTATTTCTGAA+GGG | 0.518136 | 7_4:-53260743 | Msa1162520:CDS |
| TTTCATGTGGGAATGTTCCT+GGG | 0.520194 | 7_4:-53262618 | Msa1162520:CDS |
| TTGTCTCCAACAATTTCAGC+AGG | 0.521373 | 7_4:-53262109 | Msa1162520:CDS |
| AAATATTGCTAAAGATGTTG+AGG | 0.533851 | 7_4:-53260760 | Msa1162520:CDS |
| ATTGGAAAAGGCTTGCTCCC+AGG | 0.533883 | 7_4:+53262601 | None:intergenic |
| AAATTACCTTGAGCTGACTC+TGG | 0.535434 | 7_4:+53261767 | None:intergenic |
| TGAGGTTTCTATTTCTGAAG+GGG | 0.541433 | 7_4:-53260742 | Msa1162520:CDS |
| CAACTATCCATAGTTGAAGA+AGG | 0.544834 | 7_4:-53262964 | Msa1162520:CDS |
| CAGAAGCTGGTGACTCGAAA+CGG | 0.549320 | 7_4:+53262902 | None:intergenic |
| TTGGAAGCACTTCTTCTAGT+GGG | 0.558294 | 7_4:-53262069 | Msa1162520:CDS |
| TATGCAACAGAAAACTGCAT+GGG | 0.559407 | 7_4:-53262874 | Msa1162520:CDS |
| ATCCGTTTGCAGGTTGCTCG+TGG | 0.560326 | 7_4:-53262184 | Msa1162520:intron |
| TTGTATTTGGGGTATTGAAG+AGG | 0.573644 | 7_4:+53260799 | None:intergenic |
| TCCCTTAGAGATTGACACAA+AGG | 0.575040 | 7_4:+53262772 | None:intergenic |
| TTATGCAACAGAAAACTGCA+TGG | 0.589899 | 7_4:-53262875 | Msa1162520:CDS |
| TGTTAGACAGTTCAAAGTTG+GGG | 0.605516 | 7_4:+53262713 | None:intergenic |
| GCGTCTTCATGAACAACTAG+AGG | 0.618964 | 7_4:-53261118 | Msa1162520:intron |
| TTGAAGATGATGGACTCTGA+AGG | 0.627815 | 7_4:-53261848 | Msa1162520:CDS |
| TTCATGCCAGAGTCAGCTCA+AGG | 0.639842 | 7_4:-53261773 | Msa1162520:intron |
| CAATTGCGACTTGAGGAACA+AGG | 0.653307 | 7_4:-53260870 | Msa1162520:CDS |
| AACGTTACAATTGCGACTTG+AGG | 0.655322 | 7_4:-53260877 | Msa1162520:CDS |
| AACTTCAATTAGATGCACAA+AGG | 0.668848 | 7_4:-53261140 | Msa1162520:CDS |
| TGATGAGCTGTTGCTAACTG+AGG | 0.672832 | 7_4:+53262546 | None:intergenic |
| ATAGATGATGTGCAGCATGT+TGG | 0.702726 | 7_4:-53261345 | Msa1162520:CDS |
| GAGTGTGTGAATCGCCTTGG+GGG | 0.715113 | 7_4:-53261986 | Msa1162520:CDS |
| TGAGTGTGTGAATCGCCTTG+GGG | 0.716876 | 7_4:-53261987 | Msa1162520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CCATATAAAATAAAAAAATA+AGG | + | chr7_4:53262773-53262792 | None:intergenic | 10.0% |
| !!! | CCTTATTTTTTTATTTTATA+TGG | - | chr7_4:53262770-53262789 | Msa1162520:CDS | 10.0% |
| !! | CCATATAAAATAAAAAAATA+AGG | + | chr7_4:53262773-53262792 | None:intergenic | 10.0% |
| !!! | CCTTATTTTTTTATTTTATA+TGG | - | chr7_4:53262770-53262789 | Msa1162520:CDS | 10.0% |
| !!! | AAAATTTATTCAAGTTTTCT+GGG | + | chr7_4:53261093-53261112 | None:intergenic | 15.0% |
| !!! | AAAATTTATTCAAGTTTTCT+GGG | + | chr7_4:53261093-53261112 | None:intergenic | 15.0% |
| !!! | ATGAATCAAATTTGGAATAT+AGG | - | chr7_4:53260725-53260744 | Msa1162520:CDS | 20.0% |
| !! | AAGATTGATTATTATCAACT+TGG | + | chr7_4:53260898-53260917 | None:intergenic | 20.0% |
| !! | ATCATATAAGGTTAATGATT+TGG | - | chr7_4:53260928-53260947 | Msa1162520:intron | 20.0% |
| !!! | GAAAATTTATTCAAGTTTTC+TGG | + | chr7_4:53261094-53261113 | None:intergenic | 20.0% |
| !!! | AACTTGAATAAATTTTCATG+TGG | - | chr7_4:53261097-53261116 | Msa1162520:intron | 20.0% |
| !!! | ACTTGAATAAATTTTCATGT+GGG | - | chr7_4:53261098-53261117 | Msa1162520:intron | 20.0% |
| !! | AGTATAAATATGTTATGACA+CGG | + | chr7_4:53261358-53261377 | None:intergenic | 20.0% |
| !!! | ACATTAGTTTGTTCAATATT+AGG | + | chr7_4:53262328-53262347 | None:intergenic | 20.0% |
| !!! | TAAGAGTATAAAAGTAGTTT+AGG | + | chr7_4:53262439-53262458 | None:intergenic | 20.0% |
| !! | TTAGAGTCATATAACATATA+AGG | + | chr7_4:53262507-53262526 | None:intergenic | 20.0% |
| !! | AAGTTCATAAAGAAAATGAA+TGG | + | chr7_4:53262646-53262665 | None:intergenic | 20.0% |
| !! | TTTCTAATCATATTCTTTCT+TGG | - | chr7_4:53262815-53262834 | Msa1162520:CDS | 20.0% |
| !!! | TATCATCATTGATTGTATTT+GGG | + | chr7_4:53262944-53262963 | None:intergenic | 20.0% |
| !!! | ATGAATCAAATTTGGAATAT+AGG | - | chr7_4:53260725-53260744 | Msa1162520:CDS | 20.0% |
| !! | AAGATTGATTATTATCAACT+TGG | + | chr7_4:53260898-53260917 | None:intergenic | 20.0% |
| !! | ATCATATAAGGTTAATGATT+TGG | - | chr7_4:53260928-53260947 | Msa1162520:intron | 20.0% |
| !!! | GAAAATTTATTCAAGTTTTC+TGG | + | chr7_4:53261094-53261113 | None:intergenic | 20.0% |
| !!! | AACTTGAATAAATTTTCATG+TGG | - | chr7_4:53261097-53261116 | Msa1162520:intron | 20.0% |
| !!! | ACTTGAATAAATTTTCATGT+GGG | - | chr7_4:53261098-53261117 | Msa1162520:intron | 20.0% |
| !! | AGTATAAATATGTTATGACA+CGG | + | chr7_4:53261358-53261377 | None:intergenic | 20.0% |
| !!! | ACATTAGTTTGTTCAATATT+AGG | + | chr7_4:53262328-53262347 | None:intergenic | 20.0% |
| !!! | TAAGAGTATAAAAGTAGTTT+AGG | + | chr7_4:53262439-53262458 | None:intergenic | 20.0% |
| !! | TTAGAGTCATATAACATATA+AGG | + | chr7_4:53262507-53262526 | None:intergenic | 20.0% |
| !! | AAGTTCATAAAGAAAATGAA+TGG | + | chr7_4:53262646-53262665 | None:intergenic | 20.0% |
| !! | TTTCTAATCATATTCTTTCT+TGG | - | chr7_4:53262815-53262834 | Msa1162520:CDS | 20.0% |
| !!! | TATCATCATTGATTGTATTT+GGG | + | chr7_4:53262944-53262963 | None:intergenic | 20.0% |
| !! | GTGTTTGTATTACATGATTT+TGG | + | chr7_4:53260797-53260816 | None:intergenic | 25.0% |
| !! | TTTGAGTTCTCAATCATATA+AGG | - | chr7_4:53260916-53260935 | Msa1162520:intron | 25.0% |
| ! | AAGGGAAAACAATCATTTAT+TGG | - | chr7_4:53260973-53260992 | Msa1162520:intron | 25.0% |
| !! | AGCTCATCATTTTGTAATAA+TGG | - | chr7_4:53261196-53261215 | Msa1162520:intron | 25.0% |
| ! | ATAAATCATCGTATCACATT+AGG | - | chr7_4:53261488-53261507 | Msa1162520:intron | 25.0% |
| ! | CAAGTAAAACAAGAATTAGA+TGG | - | chr7_4:53261692-53261711 | Msa1162520:intron | 25.0% |
| !! | ATTCTGATAGTCTTTTCTAT+TGG | - | chr7_4:53261823-53261842 | Msa1162520:CDS | 25.0% |
| !! | ATCATCTTCAATATAGCTTT+TGG | + | chr7_4:53261871-53261890 | None:intergenic | 25.0% |
| ! | AAAAGCTATATTGAAGATGA+TGG | - | chr7_4:53261870-53261889 | Msa1162520:CDS | 25.0% |
| !! | ATGACTTTTCACATGAAATA+TGG | + | chr7_4:53261911-53261930 | None:intergenic | 25.0% |
| ! | CTCAACATGAAAAATAAACT+AGG | + | chr7_4:53262029-53262048 | None:intergenic | 25.0% |
| !! | TTTGTTATAGTGTTTGTCAA+TGG | - | chr7_4:53262106-53262125 | Msa1162520:CDS | 25.0% |
| ! | CATTATTCACTATGAACAAT+GGG | + | chr7_4:53262155-53262174 | None:intergenic | 25.0% |
| ! | ACATTATTCACTATGAACAA+TGG | + | chr7_4:53262156-53262175 | None:intergenic | 25.0% |
| ! | TGAATAATGTCTGGTTAAAT+AGG | - | chr7_4:53262166-53262185 | Msa1162520:CDS | 25.0% |
| ! | TGTATTTATATCCACTAGAA+TGG | - | chr7_4:53262222-53262241 | Msa1162520:intron | 25.0% |
| ! | GAAAGAAAATAAGCACATTT+GGG | + | chr7_4:53262284-53262303 | None:intergenic | 25.0% |
| ! | TGAAAGAAAATAAGCACATT+TGG | + | chr7_4:53262285-53262304 | None:intergenic | 25.0% |
| ! | ATGAAATTAATCAAGCAACT+TGG | + | chr7_4:53262479-53262498 | None:intergenic | 25.0% |
| !!! | CTGTTTTTTAACGATGATTT+AGG | + | chr7_4:53262707-53262726 | None:intergenic | 25.0% |
| ! | TCGTTAAAAAACAGTTTGTA+AGG | - | chr7_4:53262713-53262732 | Msa1162520:CDS | 25.0% |
| ! | AAAAAACAGTTTGTAAGGTA+AGG | - | chr7_4:53262718-53262737 | Msa1162520:CDS | 25.0% |
| !! | ATCATCATTGATTGTATTTG+GGG | + | chr7_4:53262943-53262962 | None:intergenic | 25.0% |
| !! | GTATCATCATTGATTGTATT+TGG | + | chr7_4:53262945-53262964 | None:intergenic | 25.0% |
| ! | AAATATTGCTAAAGATGTTG+AGG | - | chr7_4:53262968-53262987 | Msa1162520:CDS | 25.0% |
| !! | GTGTTTGTATTACATGATTT+TGG | + | chr7_4:53260797-53260816 | None:intergenic | 25.0% |
| !! | TTTGAGTTCTCAATCATATA+AGG | - | chr7_4:53260916-53260935 | Msa1162520:intron | 25.0% |
| ! | AAGGGAAAACAATCATTTAT+TGG | - | chr7_4:53260973-53260992 | Msa1162520:intron | 25.0% |
| !! | AGCTCATCATTTTGTAATAA+TGG | - | chr7_4:53261196-53261215 | Msa1162520:intron | 25.0% |
| ! | ATAAATCATCGTATCACATT+AGG | - | chr7_4:53261488-53261507 | Msa1162520:intron | 25.0% |
| ! | CAAGTAAAACAAGAATTAGA+TGG | - | chr7_4:53261692-53261711 | Msa1162520:intron | 25.0% |
| !! | ATTCTGATAGTCTTTTCTAT+TGG | - | chr7_4:53261823-53261842 | Msa1162520:CDS | 25.0% |
| !! | ATCATCTTCAATATAGCTTT+TGG | + | chr7_4:53261871-53261890 | None:intergenic | 25.0% |
| ! | AAAAGCTATATTGAAGATGA+TGG | - | chr7_4:53261870-53261889 | Msa1162520:CDS | 25.0% |
| !! | ATGACTTTTCACATGAAATA+TGG | + | chr7_4:53261911-53261930 | None:intergenic | 25.0% |
| ! | CTCAACATGAAAAATAAACT+AGG | + | chr7_4:53262029-53262048 | None:intergenic | 25.0% |
| !! | TTTGTTATAGTGTTTGTCAA+TGG | - | chr7_4:53262106-53262125 | Msa1162520:CDS | 25.0% |
| ! | CATTATTCACTATGAACAAT+GGG | + | chr7_4:53262155-53262174 | None:intergenic | 25.0% |
| ! | ACATTATTCACTATGAACAA+TGG | + | chr7_4:53262156-53262175 | None:intergenic | 25.0% |
| ! | TGAATAATGTCTGGTTAAAT+AGG | - | chr7_4:53262166-53262185 | Msa1162520:CDS | 25.0% |
| ! | TGTATTTATATCCACTAGAA+TGG | - | chr7_4:53262222-53262241 | Msa1162520:intron | 25.0% |
| ! | GAAAGAAAATAAGCACATTT+GGG | + | chr7_4:53262284-53262303 | None:intergenic | 25.0% |
| ! | TGAAAGAAAATAAGCACATT+TGG | + | chr7_4:53262285-53262304 | None:intergenic | 25.0% |
| ! | ATGAAATTAATCAAGCAACT+TGG | + | chr7_4:53262479-53262498 | None:intergenic | 25.0% |
| !!! | CTGTTTTTTAACGATGATTT+AGG | + | chr7_4:53262707-53262726 | None:intergenic | 25.0% |
| ! | TCGTTAAAAAACAGTTTGTA+AGG | - | chr7_4:53262713-53262732 | Msa1162520:CDS | 25.0% |
| ! | AAAAAACAGTTTGTAAGGTA+AGG | - | chr7_4:53262718-53262737 | Msa1162520:CDS | 25.0% |
| !! | ATCATCATTGATTGTATTTG+GGG | + | chr7_4:53262943-53262962 | None:intergenic | 25.0% |
| !! | GTATCATCATTGATTGTATT+TGG | + | chr7_4:53262945-53262964 | None:intergenic | 25.0% |
| ! | AAATATTGCTAAAGATGTTG+AGG | - | chr7_4:53262968-53262987 | Msa1162520:CDS | 25.0% |
| TTGGTGAAATCTCAATTGAA+TGG | - | chr7_4:53261049-53261068 | Msa1162520:intron | 30.0% | |
| !!! | TTTTGCTGTTCAATTGGAAA+AGG | + | chr7_4:53261142-53261161 | None:intergenic | 30.0% |
| !!! | AACAACTTTTGCTGTTCAAT+TGG | + | chr7_4:53261148-53261167 | None:intergenic | 30.0% |
| TAATGGAAATCATGACTGTA+TGG | - | chr7_4:53261213-53261232 | Msa1162520:intron | 30.0% | |
| TTTGCAAAATGATTCTTCTG+CGG | - | chr7_4:53261244-53261263 | Msa1162520:intron | 30.0% | |
| !! | AACAAGAATTAGATGGACTA+AGG | - | chr7_4:53261699-53261718 | Msa1162520:intron | 30.0% |
| !! | TATTGGTTTCTTGCTTATAG+AGG | - | chr7_4:53261840-53261859 | Msa1162520:CDS | 30.0% |
| TATAGTGTTTGTCAATGGAT+AGG | - | chr7_4:53262111-53262130 | Msa1162520:CDS | 30.0% | |
| TTTGTCAATGGATAGGATAT+AGG | - | chr7_4:53262118-53262137 | Msa1162520:CDS | 30.0% | |
| TGTTCATAGTGAATAATGTC+TGG | - | chr7_4:53262157-53262176 | Msa1162520:CDS | 30.0% | |
| AAACTAATGTGTCCAATTTC+AGG | - | chr7_4:53262338-53262357 | Msa1162520:intron | 30.0% | |
| AACTAATGTGTCCAATTTCA+GGG | - | chr7_4:53262339-53262358 | Msa1162520:intron | 30.0% | |
| AAATTAATCAAGCAACTTGG+TGG | + | chr7_4:53262476-53262495 | None:intergenic | 30.0% | |
| AACTTCAATTAGATGCACAA+AGG | - | chr7_4:53262588-53262607 | Msa1162520:CDS | 30.0% | |
| CATAAAGAAAATGAATGGCA+AGG | + | chr7_4:53262641-53262660 | None:intergenic | 30.0% | |
| ! | GTCTGAAATGAGTTTATAAC+GGG | + | chr7_4:53262751-53262770 | None:intergenic | 30.0% |
| ! | GGTCTGAAATGAGTTTATAA+CGG | + | chr7_4:53262752-53262771 | None:intergenic | 30.0% |
| !! | TTGAGGTTTCTATTTCTGAA+GGG | - | chr7_4:53262985-53263004 | Msa1162520:CDS | 30.0% |
| TTGGTGAAATCTCAATTGAA+TGG | - | chr7_4:53261049-53261068 | Msa1162520:intron | 30.0% | |
| !!! | TTTTGCTGTTCAATTGGAAA+AGG | + | chr7_4:53261142-53261161 | None:intergenic | 30.0% |
| !!! | AACAACTTTTGCTGTTCAAT+TGG | + | chr7_4:53261148-53261167 | None:intergenic | 30.0% |
| TAATGGAAATCATGACTGTA+TGG | - | chr7_4:53261213-53261232 | Msa1162520:intron | 30.0% | |
| TTTGCAAAATGATTCTTCTG+CGG | - | chr7_4:53261244-53261263 | Msa1162520:intron | 30.0% | |
| !! | AACAAGAATTAGATGGACTA+AGG | - | chr7_4:53261699-53261718 | Msa1162520:intron | 30.0% |
| !! | TATTGGTTTCTTGCTTATAG+AGG | - | chr7_4:53261840-53261859 | Msa1162520:CDS | 30.0% |
| TATAGTGTTTGTCAATGGAT+AGG | - | chr7_4:53262111-53262130 | Msa1162520:CDS | 30.0% | |
| TTTGTCAATGGATAGGATAT+AGG | - | chr7_4:53262118-53262137 | Msa1162520:CDS | 30.0% | |
| TGTTCATAGTGAATAATGTC+TGG | - | chr7_4:53262157-53262176 | Msa1162520:CDS | 30.0% | |
| AAACTAATGTGTCCAATTTC+AGG | - | chr7_4:53262338-53262357 | Msa1162520:intron | 30.0% | |
| AACTAATGTGTCCAATTTCA+GGG | - | chr7_4:53262339-53262358 | Msa1162520:intron | 30.0% | |
| AAATTAATCAAGCAACTTGG+TGG | + | chr7_4:53262476-53262495 | None:intergenic | 30.0% | |
| AACTTCAATTAGATGCACAA+AGG | - | chr7_4:53262588-53262607 | Msa1162520:CDS | 30.0% | |
| CATAAAGAAAATGAATGGCA+AGG | + | chr7_4:53262641-53262660 | None:intergenic | 30.0% | |
| ! | GTCTGAAATGAGTTTATAAC+GGG | + | chr7_4:53262751-53262770 | None:intergenic | 30.0% |
| ! | GGTCTGAAATGAGTTTATAA+CGG | + | chr7_4:53262752-53262771 | None:intergenic | 30.0% |
| !! | TTGAGGTTTCTATTTCTGAA+GGG | - | chr7_4:53262985-53263004 | Msa1162520:CDS | 30.0% |
| CAACTATCCATAGTTGAAGA+AGG | - | chr7_4:53260764-53260783 | Msa1162520:CDS | 35.0% | |
| TGATTCTCCTTCTTCAACTA+TGG | + | chr7_4:53260774-53260793 | None:intergenic | 35.0% | |
| TTATGCAACAGAAAACTGCA+TGG | - | chr7_4:53260853-53260872 | Msa1162520:CDS | 35.0% | |
| TATGCAACAGAAAACTGCAT+GGG | - | chr7_4:53260854-53260873 | Msa1162520:CDS | 35.0% | |
| TGTTAGACAGTTCAAAGTTG+GGG | + | chr7_4:53261018-53261037 | None:intergenic | 35.0% | |
| GTGTTAGACAGTTCAAAGTT+GGG | + | chr7_4:53261019-53261038 | None:intergenic | 35.0% | |
| AGTGTTAGACAGTTCAAAGT+TGG | + | chr7_4:53261020-53261039 | None:intergenic | 35.0% | |
| !! | TCAAGTTTTCTGGGAATCTA+AGG | + | chr7_4:53261084-53261103 | None:intergenic | 35.0% |
| CAGCAAAAGTTGTTCTTTGA+TGG | - | chr7_4:53261154-53261173 | Msa1162520:CDS | 35.0% | |
| TAATTATAGCATCCGTTTGC+AGG | - | chr7_4:53261534-53261553 | Msa1162520:intron | 35.0% | |
| AAACTTCCTGCTGAAATTGT+TGG | + | chr7_4:53261628-53261647 | None:intergenic | 35.0% | |
| GGAAGTTTATCAACTTCTCT+TGG | - | chr7_4:53261640-53261659 | Msa1162520:intron | 35.0% | |
| TCAAACTTCTACCATTCTAG+TGG | + | chr7_4:53262236-53262255 | None:intergenic | 35.0% | |
| TTGTCAGATTTCCCTGAAAT+TGG | + | chr7_4:53262353-53262372 | None:intergenic | 35.0% | |
| !! | TTGTATTTGGGGTATTGAAG+AGG | + | chr7_4:53262932-53262951 | None:intergenic | 35.0% |
| !! | GTTGAGGTTTCTATTTCTGA+AGG | - | chr7_4:53262984-53263003 | Msa1162520:CDS | 35.0% |
| !! | TGAGGTTTCTATTTCTGAAG+GGG | - | chr7_4:53262986-53263005 | Msa1162520:CDS | 35.0% |
| CAACTATCCATAGTTGAAGA+AGG | - | chr7_4:53260764-53260783 | Msa1162520:CDS | 35.0% | |
| TGATTCTCCTTCTTCAACTA+TGG | + | chr7_4:53260774-53260793 | None:intergenic | 35.0% | |
| TTATGCAACAGAAAACTGCA+TGG | - | chr7_4:53260853-53260872 | Msa1162520:CDS | 35.0% | |
| TATGCAACAGAAAACTGCAT+GGG | - | chr7_4:53260854-53260873 | Msa1162520:CDS | 35.0% | |
| TGTTAGACAGTTCAAAGTTG+GGG | + | chr7_4:53261018-53261037 | None:intergenic | 35.0% | |
| GTGTTAGACAGTTCAAAGTT+GGG | + | chr7_4:53261019-53261038 | None:intergenic | 35.0% | |
| AGTGTTAGACAGTTCAAAGT+TGG | + | chr7_4:53261020-53261039 | None:intergenic | 35.0% | |
| !! | TCAAGTTTTCTGGGAATCTA+AGG | + | chr7_4:53261084-53261103 | None:intergenic | 35.0% |
| CAGCAAAAGTTGTTCTTTGA+TGG | - | chr7_4:53261154-53261173 | Msa1162520:CDS | 35.0% | |
| TAATTATAGCATCCGTTTGC+AGG | - | chr7_4:53261534-53261553 | Msa1162520:intron | 35.0% | |
| AAACTTCCTGCTGAAATTGT+TGG | + | chr7_4:53261628-53261647 | None:intergenic | 35.0% | |
| GGAAGTTTATCAACTTCTCT+TGG | - | chr7_4:53261640-53261659 | Msa1162520:intron | 35.0% | |
| TCAAACTTCTACCATTCTAG+TGG | + | chr7_4:53262236-53262255 | None:intergenic | 35.0% | |
| TTGTCAGATTTCCCTGAAAT+TGG | + | chr7_4:53262353-53262372 | None:intergenic | 35.0% | |
| !! | TTGTATTTGGGGTATTGAAG+AGG | + | chr7_4:53262932-53262951 | None:intergenic | 35.0% |
| !! | GTTGAGGTTTCTATTTCTGA+AGG | - | chr7_4:53262984-53263003 | Msa1162520:CDS | 35.0% |
| !! | TGAGGTTTCTATTTCTGAAG+GGG | - | chr7_4:53262986-53263005 | Msa1162520:CDS | 35.0% |
| GTTGCATAAAAAGCAGAAGC+TGG | + | chr7_4:53260842-53260861 | None:intergenic | 40.0% | |
| TCCCTTTGTGTCAATCTCTA+AGG | - | chr7_4:53260954-53260973 | Msa1162520:intron | 40.0% | |
| CCCTTAGAGATTGACACAAA+GGG | + | chr7_4:53260958-53260977 | None:intergenic | 40.0% | |
| CCCTTTGTGTCAATCTCTAA+GGG | - | chr7_4:53260955-53260974 | Msa1162520:intron | 40.0% | |
| TCCCTTAGAGATTGACACAA+AGG | + | chr7_4:53260959-53260978 | None:intergenic | 40.0% | |
| GTCTAACACTTTGCAAGCAT+TGG | - | chr7_4:53261030-53261049 | Msa1162520:intron | 40.0% | |
| ! | TTTTCATGTGGGAATGTTCC+TGG | - | chr7_4:53261109-53261128 | Msa1162520:intron | 40.0% |
| TTTCATGTGGGAATGTTCCT+GGG | - | chr7_4:53261110-53261129 | Msa1162520:intron | 40.0% | |
| TCCAACGATCAAGATACTAC+TGG | - | chr7_4:53261307-53261326 | Msa1162520:intron | 40.0% | |
| TCCAGTAGTATCTTGATCGT+TGG | + | chr7_4:53261311-53261330 | None:intergenic | 40.0% | |
| AACGATCAAGATACTACTGG+AGG | - | chr7_4:53261310-53261329 | Msa1162520:intron | 40.0% | |
| TTGAGAATCCTTGCATCTCA+CGG | - | chr7_4:53261381-53261400 | Msa1162520:intron | 40.0% | |
| TTGTCTCCAACAATTTCAGC+AGG | - | chr7_4:53261619-53261638 | Msa1162520:intron | 40.0% | |
| !! | TTGGAAGCACTTCTTCTAGT+GGG | - | chr7_4:53261659-53261678 | Msa1162520:intron | 40.0% |
| !! | TTGAAGATGATGGACTCTGA+AGG | - | chr7_4:53261880-53261899 | Msa1162520:intron | 40.0% |
| ! | AAATTACCTTGAGCTGACTC+TGG | + | chr7_4:53261964-53261983 | None:intergenic | 40.0% |
| CATGCTGCACATCATCTATA+TGG | + | chr7_4:53262382-53262401 | None:intergenic | 40.0% | |
| ATAGATGATGTGCAGCATGT+TGG | - | chr7_4:53262383-53262402 | Msa1162520:intron | 40.0% | |
| TTGCAGTGGCTTTCAAATCA+AGG | - | chr7_4:53262556-53262575 | Msa1162520:CDS | 40.0% | |
| AACGTTACAATTGCGACTTG+AGG | - | chr7_4:53262851-53262870 | Msa1162520:CDS | 40.0% | |
| GTTGCATAAAAAGCAGAAGC+TGG | + | chr7_4:53260842-53260861 | None:intergenic | 40.0% | |
| TCCCTTTGTGTCAATCTCTA+AGG | - | chr7_4:53260954-53260973 | Msa1162520:intron | 40.0% | |
| CCCTTAGAGATTGACACAAA+GGG | + | chr7_4:53260958-53260977 | None:intergenic | 40.0% | |
| CCCTTTGTGTCAATCTCTAA+GGG | - | chr7_4:53260955-53260974 | Msa1162520:intron | 40.0% | |
| TCCCTTAGAGATTGACACAA+AGG | + | chr7_4:53260959-53260978 | None:intergenic | 40.0% | |
| GTCTAACACTTTGCAAGCAT+TGG | - | chr7_4:53261030-53261049 | Msa1162520:intron | 40.0% | |
| ! | TTTTCATGTGGGAATGTTCC+TGG | - | chr7_4:53261109-53261128 | Msa1162520:intron | 40.0% |
| TTTCATGTGGGAATGTTCCT+GGG | - | chr7_4:53261110-53261129 | Msa1162520:intron | 40.0% | |
| TCCAACGATCAAGATACTAC+TGG | - | chr7_4:53261307-53261326 | Msa1162520:intron | 40.0% | |
| TCCAGTAGTATCTTGATCGT+TGG | + | chr7_4:53261311-53261330 | None:intergenic | 40.0% | |
| AACGATCAAGATACTACTGG+AGG | - | chr7_4:53261310-53261329 | Msa1162520:intron | 40.0% | |
| TTGAGAATCCTTGCATCTCA+CGG | - | chr7_4:53261381-53261400 | Msa1162520:intron | 40.0% | |
| TTGTCTCCAACAATTTCAGC+AGG | - | chr7_4:53261619-53261638 | Msa1162520:intron | 40.0% | |
| !! | TTGGAAGCACTTCTTCTAGT+GGG | - | chr7_4:53261659-53261678 | Msa1162520:intron | 40.0% |
| !! | TTGAAGATGATGGACTCTGA+AGG | - | chr7_4:53261880-53261899 | Msa1162520:intron | 40.0% |
| ! | AAATTACCTTGAGCTGACTC+TGG | + | chr7_4:53261964-53261983 | None:intergenic | 40.0% |
| CATGCTGCACATCATCTATA+TGG | + | chr7_4:53262382-53262401 | None:intergenic | 40.0% | |
| ATAGATGATGTGCAGCATGT+TGG | - | chr7_4:53262383-53262402 | Msa1162520:intron | 40.0% | |
| TTGCAGTGGCTTTCAAATCA+AGG | - | chr7_4:53262556-53262575 | Msa1162520:CDS | 40.0% | |
| AACGTTACAATTGCGACTTG+AGG | - | chr7_4:53262851-53262870 | Msa1162520:CDS | 40.0% | |
| TGATGAGCTGTTGCTAACTG+AGG | + | chr7_4:53261185-53261204 | None:intergenic | 45.0% | |
| GATCAAGATACTACTGGAGG+TGG | - | chr7_4:53261313-53261332 | Msa1162520:intron | 45.0% | |
| GTTATGACACGGATCCTCTT+CGG | + | chr7_4:53261347-53261366 | None:intergenic | 45.0% | |
| TGAGAATCCTTGCATCTCAC+GGG | - | chr7_4:53261382-53261401 | Msa1162520:intron | 45.0% | |
| !! | CTTGGAAGCACTTCTTCTAG+TGG | - | chr7_4:53261658-53261677 | Msa1162520:intron | 45.0% |
| TTGAGTGTGTGAATCGCCTT+GGG | - | chr7_4:53261740-53261759 | Msa1162520:intron | 45.0% | |
| !! | ACACCACTCTTGATTTGCAG+TGG | - | chr7_4:53262542-53262561 | Msa1162520:CDS | 45.0% |
| AAGCCACTGCAAATCAAGAG+TGG | + | chr7_4:53262548-53262567 | None:intergenic | 45.0% | |
| GCGTCTTCATGAACAACTAG+AGG | - | chr7_4:53262610-53262629 | Msa1162520:CDS | 45.0% | |
| CAATTGCGACTTGAGGAACA+AGG | - | chr7_4:53262858-53262877 | Msa1162520:CDS | 45.0% | |
| TGATGAGCTGTTGCTAACTG+AGG | + | chr7_4:53261185-53261204 | None:intergenic | 45.0% | |
| GATCAAGATACTACTGGAGG+TGG | - | chr7_4:53261313-53261332 | Msa1162520:intron | 45.0% | |
| GTTATGACACGGATCCTCTT+CGG | + | chr7_4:53261347-53261366 | None:intergenic | 45.0% | |
| TGAGAATCCTTGCATCTCAC+GGG | - | chr7_4:53261382-53261401 | Msa1162520:intron | 45.0% | |
| !! | CTTGGAAGCACTTCTTCTAG+TGG | - | chr7_4:53261658-53261677 | Msa1162520:intron | 45.0% |
| TTGAGTGTGTGAATCGCCTT+GGG | - | chr7_4:53261740-53261759 | Msa1162520:intron | 45.0% | |
| !! | ACACCACTCTTGATTTGCAG+TGG | - | chr7_4:53262542-53262561 | Msa1162520:CDS | 45.0% |
| AAGCCACTGCAAATCAAGAG+TGG | + | chr7_4:53262548-53262567 | None:intergenic | 45.0% | |
| GCGTCTTCATGAACAACTAG+AGG | - | chr7_4:53262610-53262629 | Msa1162520:CDS | 45.0% | |
| CAATTGCGACTTGAGGAACA+AGG | - | chr7_4:53262858-53262877 | Msa1162520:CDS | 45.0% | |
| !!! | CTTATTTTTTTATTTTATAT+GGG | - | chr7_4:53262771-53262790 | Msa1162520:CDS | 5.0% |
| !!! | CTTATTTTTTTATTTTATAT+GGG | - | chr7_4:53262771-53262790 | Msa1162520:CDS | 5.0% |
| CAGAAGCTGGTGACTCGAAA+CGG | + | chr7_4:53260829-53260848 | None:intergenic | 50.0% | |
| GTTCAAAGTTGGGGTCATGC+TGG | + | chr7_4:53261009-53261028 | None:intergenic | 50.0% | |
| ! | ATTGGAAAAGGCTTGCTCCC+AGG | + | chr7_4:53261130-53261149 | None:intergenic | 50.0% |
| ATTCAACGACCAAGCTCTGC+TGG | + | chr7_4:53261284-53261303 | None:intergenic | 50.0% | |
| CAAGATACTACTGGAGGTGG+TGG | - | chr7_4:53261316-53261335 | Msa1162520:intron | 50.0% | |
| GAGAATCCTTGCATCTCACG+GGG | - | chr7_4:53261383-53261402 | Msa1162520:intron | 50.0% | |
| TTTCTTCCCCGTGAGATGCA+AGG | + | chr7_4:53261392-53261411 | None:intergenic | 50.0% | |
| ATCCACGAGCAACCTGCAAA+CGG | + | chr7_4:53261549-53261568 | None:intergenic | 50.0% | |
| GTTGAGTGTGTGAATCGCCT+TGG | - | chr7_4:53261739-53261758 | Msa1162520:intron | 50.0% | |
| TGAGTGTGTGAATCGCCTTG+GGG | - | chr7_4:53261741-53261760 | Msa1162520:intron | 50.0% | |
| TTCATGCCAGAGTCAGCTCA+AGG | - | chr7_4:53261955-53261974 | Msa1162520:intron | 50.0% | |
| CAGAAGCTGGTGACTCGAAA+CGG | + | chr7_4:53260829-53260848 | None:intergenic | 50.0% | |
| GTTCAAAGTTGGGGTCATGC+TGG | + | chr7_4:53261009-53261028 | None:intergenic | 50.0% | |
| ! | ATTGGAAAAGGCTTGCTCCC+AGG | + | chr7_4:53261130-53261149 | None:intergenic | 50.0% |
| ATTCAACGACCAAGCTCTGC+TGG | + | chr7_4:53261284-53261303 | None:intergenic | 50.0% | |
| CAAGATACTACTGGAGGTGG+TGG | - | chr7_4:53261316-53261335 | Msa1162520:intron | 50.0% | |
| GAGAATCCTTGCATCTCACG+GGG | - | chr7_4:53261383-53261402 | Msa1162520:intron | 50.0% | |
| TTTCTTCCCCGTGAGATGCA+AGG | + | chr7_4:53261392-53261411 | None:intergenic | 50.0% | |
| ATCCACGAGCAACCTGCAAA+CGG | + | chr7_4:53261549-53261568 | None:intergenic | 50.0% | |
| GTTGAGTGTGTGAATCGCCT+TGG | - | chr7_4:53261739-53261758 | Msa1162520:intron | 50.0% | |
| TGAGTGTGTGAATCGCCTTG+GGG | - | chr7_4:53261741-53261760 | Msa1162520:intron | 50.0% | |
| TTCATGCCAGAGTCAGCTCA+AGG | - | chr7_4:53261955-53261974 | Msa1162520:intron | 50.0% | |
| CTCTGCTGGAGAGGTAGAAG+AGG | + | chr7_4:53261270-53261289 | None:intergenic | 55.0% | |
| TCTACCTCTCCAGCAGAGCT+TGG | - | chr7_4:53261272-53261291 | Msa1162520:intron | 55.0% | |
| ATCCGTTTGCAGGTTGCTCG+TGG | - | chr7_4:53261544-53261563 | Msa1162520:intron | 55.0% | |
| GAGTGTGTGAATCGCCTTGG+GGG | - | chr7_4:53261742-53261761 | Msa1162520:intron | 55.0% | |
| ACTTACTCTCAGCACCCCCA+AGG | + | chr7_4:53261759-53261778 | None:intergenic | 55.0% | |
| CTCTGCTGGAGAGGTAGAAG+AGG | + | chr7_4:53261270-53261289 | None:intergenic | 55.0% | |
| TCTACCTCTCCAGCAGAGCT+TGG | - | chr7_4:53261272-53261291 | Msa1162520:intron | 55.0% | |
| ATCCGTTTGCAGGTTGCTCG+TGG | - | chr7_4:53261544-53261563 | Msa1162520:intron | 55.0% | |
| GAGTGTGTGAATCGCCTTGG+GGG | - | chr7_4:53261742-53261761 | Msa1162520:intron | 55.0% | |
| ACTTACTCTCAGCACCCCCA+AGG | + | chr7_4:53261759-53261778 | None:intergenic | 55.0% | |
| ACGACCAAGCTCTGCTGGAG+AGG | + | chr7_4:53261279-53261298 | None:intergenic | 60.0% | |
| !! | AGGTGGTGGAGAGACCGAAG+AGG | - | chr7_4:53261330-53261349 | Msa1162520:intron | 60.0% |
| ACGACCAAGCTCTGCTGGAG+AGG | + | chr7_4:53261279-53261298 | None:intergenic | 60.0% | |
| !! | AGGTGGTGGAGAGACCGAAG+AGG | - | chr7_4:53261330-53261349 | Msa1162520:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 53260725 | 53263025 | 53260725 | ID=Msa1162520;Name=Msa1162520 |
| chr7_4 | mRNA | 53260725 | 53263025 | 53260725 | ID=Msa1162520-mRNA-1;Parent=Msa1162520;Name=Msa1162520-mRNA-1;_AED=0.06;_eAED=0.07;_QI=0|0|0|1|1|1|6|0|383 |
| chr7_4 | exon | 53262516 | 53263025 | 53262516 | ID=Msa1162520-mRNA-1:exon:15357;Parent=Msa1162520-mRNA-1 |
| chr7_4 | exon | 53261978 | 53262194 | 53261978 | ID=Msa1162520-mRNA-1:exon:15356;Parent=Msa1162520-mRNA-1 |
| chr7_4 | exon | 53261774 | 53261890 | 53261774 | ID=Msa1162520-mRNA-1:exon:15355;Parent=Msa1162520-mRNA-1 |
| chr7_4 | exon | 53261336 | 53261390 | 53261336 | ID=Msa1162520-mRNA-1:exon:15354;Parent=Msa1162520-mRNA-1 |
| chr7_4 | exon | 53261119 | 53261188 | 53261119 | ID=Msa1162520-mRNA-1:exon:15353;Parent=Msa1162520-mRNA-1 |
| chr7_4 | exon | 53260725 | 53260907 | 53260725 | ID=Msa1162520-mRNA-1:exon:15352;Parent=Msa1162520-mRNA-1 |
| chr7_4 | CDS | 53262516 | 53263025 | 53262516 | ID=Msa1162520-mRNA-1:cds;Parent=Msa1162520-mRNA-1 |
| chr7_4 | CDS | 53261978 | 53262194 | 53261978 | ID=Msa1162520-mRNA-1:cds;Parent=Msa1162520-mRNA-1 |
| chr7_4 | CDS | 53261774 | 53261890 | 53261774 | ID=Msa1162520-mRNA-1:cds;Parent=Msa1162520-mRNA-1 |
| chr7_4 | CDS | 53261336 | 53261390 | 53261336 | ID=Msa1162520-mRNA-1:cds;Parent=Msa1162520-mRNA-1 |
| chr7_4 | CDS | 53261119 | 53261188 | 53261119 | ID=Msa1162520-mRNA-1:cds;Parent=Msa1162520-mRNA-1 |
| chr7_4 | CDS | 53260725 | 53260907 | 53260725 | ID=Msa1162520-mRNA-1:cds;Parent=Msa1162520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
