Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075680 | XP_024642270.2 | 81.962 | 948 | 122 | 4 | 55 | 996 | 29 | 933 | 0.0 | 1607 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075680 | A0A396ITR3 | 69.809 | 785 | 231 | 3 | 212 | 996 | 186 | 964 | 0.0 | 1154 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1075670 | Msa1075680 | 0.800621 | 1.322294e-48 | -8.615850e-47 |
| Msa1075680 | Msa1075690 | 0.849787 | 2.584230e-60 | -8.615850e-47 |
| Msa1075680 | Msa1237100 | 0.807017 | 6.205776e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075680 | MtrunA17_Chr3g0101871 | 69.809 | 785 | 231 | 3 | 212 | 996 | 186 | 964 | 0.0 | 1154 |
| Msa1075680 | MtrunA17_Chr7g0269651 | 45.714 | 910 | 445 | 14 | 99 | 971 | 90 | 987 | 0.0 | 778 |
| Msa1075680 | MtrunA17_Chr1g0173671 | 45.626 | 583 | 300 | 6 | 178 | 749 | 183 | 759 | 1.08e-171 | 520 |
| Msa1075680 | MtrunA17_Chr1g0206491 | 43.649 | 433 | 234 | 5 | 212 | 640 | 150 | 576 | 1.83e-120 | 380 |
| Msa1075680 | MtrunA17_Chr7g0270391 | 47.401 | 327 | 170 | 1 | 669 | 995 | 1 | 325 | 7.65e-102 | 325 |
| Msa1075680 | MtrunA17_Chr3g0093501 | 49.291 | 282 | 124 | 2 | 597 | 878 | 7 | 269 | 4.29e-90 | 288 |
| Msa1075680 | MtrunA17_Chr1g0173681 | 51.786 | 224 | 104 | 1 | 773 | 996 | 2 | 221 | 2.26e-71 | 240 |
| Msa1075680 | MtrunA17_Chr5g0400991 | 47.590 | 166 | 82 | 2 | 398 | 562 | 1 | 162 | 1.03e-43 | 156 |
| Msa1075680 | MtrunA17_Chr1g0206501 | 52.564 | 78 | 37 | 0 | 919 | 996 | 1 | 78 | 2.93e-18 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 172 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAACTGTGAACAATATTT+TGG | 0.071044 | 7_2:+74135096 | Msa1075680:CDS |
| GTCAACAATCTTAAAATTTC+TGG | 0.124910 | 7_2:-74137282 | None:intergenic |
| ACCACAGCACAAAGAAAATT+TGG | 0.148721 | 7_2:-74136035 | None:intergenic |
| CATCACCATATGCAAGATTT+TGG | 0.211882 | 7_2:-74135548 | None:intergenic |
| CTTAAAATTTCTGGCCATTT+CGG | 0.221406 | 7_2:-74137273 | None:intergenic |
| CTGAATCGATGTTCACTTCT+TGG | 0.222851 | 7_2:+74138243 | Msa1075680:CDS |
| GTACAACGAACGACTTAAAA+AGG | 0.236668 | 7_2:+74135994 | Msa1075680:CDS |
| TTAGTCAATATGAAACAAAT+TGG | 0.249527 | 7_2:+74135523 | Msa1075680:CDS |
| TACAATTCTGGTTTCTTTAG+AGG | 0.249751 | 7_2:-74137642 | None:intergenic |
| TTAACTAAATCGTACAATTC+TGG | 0.254209 | 7_2:-74137654 | None:intergenic |
| TAAGTTAATAACTTTGCTTC+TGG | 0.280235 | 7_2:-74138287 | None:intergenic |
| TTTGTTTAAATACATTAATA+AGG | 0.282053 | 7_2:+74137959 | Msa1075680:CDS |
| CGCAAACGATTGAATCAAAT+TGG | 0.286822 | 7_2:+74135369 | Msa1075680:CDS |
| CCTGGAGCAAAATTTGATTC+TGG | 0.290088 | 7_2:+74136196 | Msa1075680:CDS |
| CTCAACAACTCTGGAGGTTC+TGG | 0.296343 | 7_2:-74136085 | None:intergenic |
| ATGGATCAACTTTACTTTGA+TGG | 0.298445 | 7_2:+74137192 | Msa1075680:CDS |
| TCTTAAACTTAGGTTAATTT+CGG | 0.298490 | 7_2:+74136621 | Msa1075680:CDS |
| CCTTCTTGCTCTCCTAAGTT+TGG | 0.300748 | 7_2:-74135026 | None:intergenic |
| TTTGAACAAAAGAATAATAA+TGG | 0.312481 | 7_2:+74135813 | Msa1075680:CDS |
| AGAAGCAAAGTTGGGTTATA+CGG | 0.324339 | 7_2:-74137879 | None:intergenic |
| TAAAGAACTCAGATTTGTTA+AGG | 0.325345 | 7_2:+74138472 | Msa1075680:CDS |
| GTCCCTCAAATGCCCTCATC+TGG | 0.326881 | 7_2:-74136948 | None:intergenic |
| CCAATTCAATCTCAGTTGTT+GGG | 0.332735 | 7_2:+74135157 | Msa1075680:CDS |
| TCAAAATCATTATTGTTCTC+AGG | 0.338669 | 7_2:-74135630 | None:intergenic |
| CCACAGCACAAAGAAAATTT+GGG | 0.346532 | 7_2:-74136034 | None:intergenic |
| CAAAGGTTAACAAACATAAT+AGG | 0.347635 | 7_2:+74136893 | Msa1075680:CDS |
| ATACCATTGGGAGACTCATT+TGG | 0.355974 | 7_2:+74138378 | Msa1075680:CDS |
| TACCATTGGGAGACTCATTT+GGG | 0.361643 | 7_2:+74138379 | Msa1075680:CDS |
| TATAAAGATCATGAGCAAAT+TGG | 0.362320 | 7_2:+74138194 | Msa1075680:CDS |
| TATAATCCATGGGAAAATTC+AGG | 0.364887 | 7_2:+74135678 | Msa1075680:CDS |
| AAAAGAATCAAACAAAGCTT+AGG | 0.365266 | 7_2:+74137058 | Msa1075680:CDS |
| ATTGTTACTAAAGAGTTGAT+TGG | 0.365555 | 7_2:-74135182 | None:intergenic |
| AAAGAACTCAGATTTGTTAA+GGG | 0.381001 | 7_2:+74138473 | Msa1075680:CDS |
| GTTAAGGCACACATGATTCA+TGG | 0.381184 | 7_2:+74137672 | Msa1075680:CDS |
| GGAGTAGGATATTTGTTTGA+TGG | 0.383266 | 7_2:-74137579 | None:intergenic |
| GATAGATTCTCGACAATAGT+AGG | 0.387674 | 7_2:-74136514 | None:intergenic |
| GATATTTGTTTGATGGATGC+AGG | 0.393740 | 7_2:-74137572 | None:intergenic |
| ACAATTGAGTTTCAGAAAAG+AGG | 0.393825 | 7_2:+74137522 | Msa1075680:CDS |
| TTTAACAAAGAAGGGAATGT+TGG | 0.395531 | 7_2:+74137386 | Msa1075680:CDS |
| TTAACAAAGAAGGGAATGTT+GGG | 0.397008 | 7_2:+74137387 | Msa1075680:CDS |
| CACAAACAGGCACCGCAATA+AGG | 0.397511 | 7_2:-74135971 | None:intergenic |
| CAATAAGGACACTCAAATAA+AGG | 0.400428 | 7_2:-74135956 | None:intergenic |
| CTATATCCATCTTCGCCATA+TGG | 0.404648 | 7_2:-74136826 | None:intergenic |
| CAACTTGTATCAACATTAAT+CGG | 0.407304 | 7_2:-74135432 | None:intergenic |
| CCCAACAACTGAGATTGAAT+TGG | 0.413115 | 7_2:-74135157 | None:intergenic |
| TCTGGTTTCTTTAGAGGATC+CGG | 0.414857 | 7_2:-74137636 | None:intergenic |
| TCCAATTCAATCTCAGTTGT+TGG | 0.416650 | 7_2:+74135156 | Msa1075680:CDS |
| GAGCAAGAAGGATGGATATT+CGG | 0.417712 | 7_2:+74135038 | Msa1075680:CDS |
| ACTGTTTGATTTAACAAAGA+AGG | 0.420144 | 7_2:+74137377 | Msa1075680:CDS |
| TATTTCCCTTTCATGATCCA+TGG | 0.421261 | 7_2:-74134990 | None:intergenic |
| ATTTGGGTGCCTCGAAGTAC+TGG | 0.421706 | 7_2:+74138395 | Msa1075680:CDS |
| TTGTTTAAATACATTAATAA+GGG | 0.425553 | 7_2:+74137960 | Msa1075680:CDS |
| CCTTTACATGTAATCCGAAA+TGG | 0.425836 | 7_2:+74137259 | Msa1075680:CDS |
| ATCATGGAAACCTCGGGAAA+AGG | 0.429567 | 7_2:+74138352 | Msa1075680:CDS |
| CTAGGAGCCTCTCCATCCTT+TGG | 0.443053 | 7_2:-74136292 | None:intergenic |
| TCATGGAAACCTCGGGAAAA+GGG | 0.444534 | 7_2:+74138353 | Msa1075680:CDS |
| ATGTCCCGGATCTTAAACTT+AGG | 0.445242 | 7_2:+74136611 | Msa1075680:CDS |
| TACGATTAATGCGGCAACTT+CGG | 0.445747 | 7_2:-74136686 | None:intergenic |
| AGAATTGTACGATTTAGTTA+AGG | 0.450844 | 7_2:+74137656 | Msa1075680:CDS |
| CTGAGTTCTTTATAAGATGT+TGG | 0.450912 | 7_2:-74138461 | None:intergenic |
| AATCCAGATGAGGGCATTTG+AGG | 0.453759 | 7_2:+74136945 | Msa1075680:CDS |
| TAGTCAATATGAAACAAATT+GGG | 0.455347 | 7_2:+74135524 | Msa1075680:CDS |
| GATATTTGAGAAGCAAAGTT+GGG | 0.455713 | 7_2:-74137887 | None:intergenic |
| AAAGAATCAAACAAAGCTTA+GGG | 0.457524 | 7_2:+74137059 | Msa1075680:CDS |
| ATTAACCTAAGTTTAAGATC+CGG | 0.458113 | 7_2:-74136616 | None:intergenic |
| TTGCCATCTACTTATGTTGG+AGG | 0.461262 | 7_2:+74137159 | Msa1075680:CDS |
| TCAACTTTACTTTGATGGAA+TGG | 0.462045 | 7_2:+74137197 | Msa1075680:CDS |
| TCGTTCGTTGTACCACAAAC+AGG | 0.464531 | 7_2:-74135984 | None:intergenic |
| AATGTTGAGGGCTCTGCAAA+AGG | 0.464619 | 7_2:+74137123 | Msa1075680:CDS |
| GTAGCAAGTTATGAAGATCT+TGG | 0.464760 | 7_2:+74135929 | Msa1075680:intron |
| CTTATTGCGGTGCCTGTTTG+TGG | 0.465375 | 7_2:+74135972 | Msa1075680:CDS |
| AGAATCGAATTCACGGAGTA+AGG | 0.466496 | 7_2:+74136356 | Msa1075680:CDS |
| CTGATTCAGATTATAATCCA+TGG | 0.469038 | 7_2:+74135667 | Msa1075680:CDS |
| ATCCAGATGAGGGCATTTGA+GGG | 0.469484 | 7_2:+74136946 | Msa1075680:CDS |
| ATGTTTGCATTTACGTCACC+TGG | 0.469711 | 7_2:+74136178 | Msa1075680:CDS |
| CCACCTACAGTTAGAATTCA+AGG | 0.470556 | 7_2:+74136238 | Msa1075680:CDS |
| CAAAGGATGGAGAGGCTCCT+AGG | 0.476232 | 7_2:+74136293 | Msa1075680:CDS |
| GATTCATGGTCCATGTGGTT+TGG | 0.477473 | 7_2:+74137686 | Msa1075680:CDS |
| CAAAATCATTATTGTTCTCA+GGG | 0.480494 | 7_2:-74135629 | None:intergenic |
| CGGGAAAAGGGCTATACCAT+TGG | 0.480894 | 7_2:+74138365 | Msa1075680:CDS |
| CGACCTCCAACATAAGTAGA+TGG | 0.484115 | 7_2:-74137162 | None:intergenic |
| GAAATACAGAATCGAATTCA+CGG | 0.485284 | 7_2:+74136349 | Msa1075680:CDS |
| AAGATCCTTGATACAATGTC+TGG | 0.485668 | 7_2:-74137333 | None:intergenic |
| TGGGTCCAAAATCTTGCATA+TGG | 0.486440 | 7_2:+74135543 | Msa1075680:CDS |
| GTGGTAGAGCATGATCAAAT+AGG | 0.488377 | 7_2:+74135393 | Msa1075680:CDS |
| TCTGGAGGTTCTGGCAAAGT+TGG | 0.492088 | 7_2:-74136076 | None:intergenic |
| TTTAAACAAATACTTAATTG+AGG | 0.492899 | 7_2:-74137946 | None:intergenic |
| CCATTTCGGATTACATGTAA+AGG | 0.493784 | 7_2:-74137259 | None:intergenic |
| TGATATTTGAGAAGCAAAGT+TGG | 0.494107 | 7_2:-74137888 | None:intergenic |
| CTTTGATTTGCCAAACCACA+TGG | 0.495178 | 7_2:-74137696 | None:intergenic |
| AATCATTTCTGCAGAGATAC+CGG | 0.497788 | 7_2:+74137617 | Msa1075680:CDS |
| GATCAACAATCGTCGATGGC+TGG | 0.497915 | 7_2:-74137770 | None:intergenic |
| GGGAAAAGGGCTATACCATT+GGG | 0.499785 | 7_2:+74138366 | Msa1075680:CDS |
| ATCGATGTTCACTTCTTGGA+TGG | 0.500101 | 7_2:+74138247 | Msa1075680:CDS |
| CTGTTTGATTTAACAAAGAA+GGG | 0.502814 | 7_2:+74137378 | Msa1075680:CDS |
| CAATTCAATCTCAGTTGTTG+GGG | 0.504894 | 7_2:+74135158 | Msa1075680:CDS |
| AGTCAACAAAATAATGTTGA+GGG | 0.506544 | 7_2:+74137111 | Msa1075680:CDS |
| AACAAATGTCTCAACAACTC+TGG | 0.509465 | 7_2:-74136094 | None:intergenic |
| GTAAAGGTAATAAATAGATC+AGG | 0.510118 | 7_2:-74137243 | None:intergenic |
| TCGACGATTGTTGATCAAGA+AGG | 0.510601 | 7_2:+74137777 | Msa1075680:CDS |
| GAGATTGTTCTTTCATGATG+AGG | 0.512634 | 7_2:+74138154 | Msa1075680:CDS |
| TACAATTCTCCAGTACTTCG+AGG | 0.514714 | 7_2:-74138404 | None:intergenic |
| GGTAGTTTGTTGCCAAAGGA+TGG | 0.515659 | 7_2:+74136280 | Msa1075680:CDS |
| TTAACCTAAGTTTAAGATCC+GGG | 0.519775 | 7_2:-74136615 | None:intergenic |
| AGATTGTTCTTTCATGATGA+GGG | 0.524176 | 7_2:+74138155 | Msa1075680:CDS |
| CGGCAACTTCGGATACAGTT+GGG | 0.526074 | 7_2:-74136675 | None:intergenic |
| ATGTGAAGAAAACAAGATCA+TGG | 0.527846 | 7_2:+74138336 | Msa1075680:CDS |
| ACAGTTTGATTAACAGAAGA+CGG | 0.532776 | 7_2:-74135082 | None:intergenic |
| TAGGATCCATGGATCATGAA+AGG | 0.534183 | 7_2:+74134984 | None:intergenic |
| CGACGATTGTTGATCAAGAA+GGG | 0.534284 | 7_2:+74137778 | Msa1075680:CDS |
| GAATTCTGATATAGATGTCC+CGG | 0.537351 | 7_2:+74136597 | Msa1075680:CDS |
| AATGATGCTGACCGTCGCTA+GGG | 0.537843 | 7_2:+74138436 | Msa1075680:CDS |
| GAATGATGCTGACCGTCGCT+AGG | 0.539854 | 7_2:+74138435 | Msa1075680:CDS |
| AGGATCCATGGATCATGAAA+GGG | 0.544847 | 7_2:+74134985 | None:intergenic |
| GGTGGATGGATTCACAATGT+TGG | 0.545509 | 7_2:+74137011 | Msa1075680:CDS |
| GCGGCAACTTCGGATACAGT+TGG | 0.547731 | 7_2:-74136676 | None:intergenic |
| AAGAACAATCTCTCTACAGC+AGG | 0.548554 | 7_2:-74138143 | None:intergenic |
| TTGTCGATGTCATCTGGAGT+AGG | 0.549018 | 7_2:-74137594 | None:intergenic |
| CGCGAGGTGGTCACTTACAA+AGG | 0.553681 | 7_2:+74136752 | Msa1075680:CDS |
| AACAAGATCATGGAAACCTC+GGG | 0.555547 | 7_2:+74138346 | Msa1075680:CDS |
| GATTGGTAGTTTGTTGCCAA+AGG | 0.556683 | 7_2:+74136276 | Msa1075680:CDS |
| AATGGTCGCACGATAGAGAA+AGG | 0.560706 | 7_2:+74137825 | Msa1075680:CDS |
| TTATTTGAGTGTCCTTATTG+CGG | 0.562021 | 7_2:+74135959 | Msa1075680:CDS |
| TTTCAGCAAGTGAAGCATGT+TGG | 0.566949 | 7_2:+74138087 | Msa1075680:CDS |
| AAACAAGATCATGGAAACCT+CGG | 0.567179 | 7_2:+74138345 | Msa1075680:CDS |
| CAGTGAAGATGATGATGGAT+GGG | 0.567839 | 7_2:+74135785 | Msa1075680:CDS |
| AAGCTCACATAAACATGGAA+TGG | 0.568410 | 7_2:+74137910 | Msa1075680:CDS |
| AATCAACTCTTTAGTAACAA+TGG | 0.573376 | 7_2:+74135184 | Msa1075680:CDS |
| ATCGACCAGACATTGTATCA+AGG | 0.576997 | 7_2:+74137328 | Msa1075680:CDS |
| CACCTTCCATCTCTCATGCA+TGG | 0.579129 | 7_2:-74137723 | None:intergenic |
| AACATCGATTCAGTTACACT+TGG | 0.582681 | 7_2:-74138233 | None:intergenic |
| AGTTCACCATGCATGAGAGA+TGG | 0.583641 | 7_2:+74137717 | Msa1075680:CDS |
| TGATTCAGATTATAATCCAT+GGG | 0.585967 | 7_2:+74135668 | Msa1075680:CDS |
| GACGAAGCTTGATGTTCGTT+AGG | 0.590367 | 7_2:-74138011 | None:intergenic |
| GCAGTGAAGATGATGATGGA+TGG | 0.590812 | 7_2:+74135784 | Msa1075680:CDS |
| GATATTATTATTCAAGCGCG+AGG | 0.591838 | 7_2:+74136736 | Msa1075680:CDS |
| TGCATTTAGAATCCAGATGA+GGG | 0.592305 | 7_2:+74136936 | Msa1075680:CDS |
| TCATGAGCTCTCTGACGCAA+AGG | 0.594892 | 7_2:-74137306 | None:intergenic |
| ACTTAGGAGAGCAAGAAGGA+TGG | 0.595506 | 7_2:+74135030 | Msa1075680:CDS |
| ATGGCTATATGTAGCAAAGT+CGG | 0.596636 | 7_2:+74137216 | Msa1075680:CDS |
| TCTTGATCAACAATCGTCGA+TGG | 0.605638 | 7_2:-74137774 | None:intergenic |
| CCTTGAATTCTAACTGTAGG+TGG | 0.605931 | 7_2:-74136238 | None:intergenic |
| TGACCTTGAATTCTAACTGT+AGG | 0.608046 | 7_2:-74136241 | None:intergenic |
| TCTAGCAGTGAAGATGATGA+TGG | 0.609575 | 7_2:+74135780 | Msa1075680:CDS |
| TTGCATTTAGAATCCAGATG+AGG | 0.611091 | 7_2:+74136935 | Msa1075680:CDS |
| AAGTCAACAAAATAATGTTG+AGG | 0.611254 | 7_2:+74137110 | Msa1075680:CDS |
| TTTGTTGCCAAAGGATGGAG+AGG | 0.613109 | 7_2:+74136285 | Msa1075680:CDS |
| ATAGGTTAACAATTAGAGAG+TGG | 0.614164 | 7_2:+74136911 | Msa1075680:CDS |
| ACATTAATAAGGGTTCAGAC+AGG | 0.619124 | 7_2:+74137970 | Msa1075680:CDS |
| ATATCAAGCTCACATAAACA+TGG | 0.619159 | 7_2:+74137905 | Msa1075680:CDS |
| AAAAGCAGAATATGTGCATG+AGG | 0.619789 | 7_2:-74137549 | None:intergenic |
| GGGAATGTTGGGGAAAGTCG+TGG | 0.628209 | 7_2:+74137398 | Msa1075680:CDS |
| ATATAAAGTTGAGCGAACCT+AGG | 0.631413 | 7_2:-74136310 | None:intergenic |
| TAACAAAGAAGGGAATGTTG+GGG | 0.632901 | 7_2:+74137388 | Msa1075680:CDS |
| AAATGTCTCAACAACTCTGG+AGG | 0.634053 | 7_2:-74136091 | None:intergenic |
| CACCATGCATGAGAGATGGA+AGG | 0.634217 | 7_2:+74137721 | Msa1075680:CDS |
| CACATGATTCATGGTCCATG+TGG | 0.635302 | 7_2:+74137681 | Msa1075680:CDS |
| AAATCTTGCATATGGTGATG+TGG | 0.639273 | 7_2:+74135551 | Msa1075680:CDS |
| GTAGAGCATGATCAAATAGG+AGG | 0.642288 | 7_2:+74135396 | Msa1075680:CDS |
| CCAAACTTAGGAGAGCAAGA+AGG | 0.642957 | 7_2:+74135026 | Msa1075680:CDS |
| GGATGGATTCACAATGTTGG+AGG | 0.643687 | 7_2:+74137014 | Msa1075680:CDS |
| GAAGTTGCCGCATTAATCGT+AGG | 0.645047 | 7_2:+74136688 | Msa1075680:CDS |
| ACGATTGAATCAAATTGGAG+TGG | 0.649746 | 7_2:+74135374 | Msa1075680:CDS |
| AGATGTTGGACCCCTAGCGA+CGG | 0.656240 | 7_2:-74138447 | None:intergenic |
| ATGATGCTGACCGTCGCTAG+GGG | 0.658313 | 7_2:+74138437 | Msa1075680:CDS |
| TTGGGGAAAAGAAAGGGACC+TGG | 0.658535 | 7_2:+74135115 | Msa1075680:CDS |
| AGTGAAGATGATGATGGATG+GGG | 0.663849 | 7_2:+74135786 | Msa1075680:CDS |
| ACAACTTGAGATCGTTACAA+AGG | 0.664267 | 7_2:+74136876 | Msa1075680:CDS |
| ATTATTATTCAAGCGCGAGG+TGG | 0.665132 | 7_2:+74136739 | Msa1075680:CDS |
| TGGAGGCAGAGAAATTGAGA+TGG | 0.666385 | 7_2:+74137031 | Msa1075680:CDS |
| CACCCAAATGAGTCTCCCAA+TGG | 0.673219 | 7_2:-74138381 | None:intergenic |
| AACATCTCCTACGATTAATG+CGG | 0.681028 | 7_2:-74136695 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTATTTAATTAAATAT+AGG | - | chr7_2:74135324-74135343 | None:intergenic | 0.0% |
| !!! | GATTAAAATAATTGTTATTT+TGG | + | chr7_2:74135222-74135241 | Msa1075680:intron | 10.0% |
| !!! | AATTTCATAAATTTTTATCT+AGG | + | chr7_2:74135253-74135272 | Msa1075680:intron | 10.0% |
| !! | AATCTGTAAAAAAAAAAAAA+CGG | - | chr7_2:74137497-74137516 | None:intergenic | 10.0% |
| !! | TTTGTTTAAATACATTAATA+AGG | + | chr7_2:74137959-74137978 | Msa1075680:CDS | 10.0% |
| !! | TTGTTTAAATACATTAATAA+GGG | + | chr7_2:74137960-74137979 | Msa1075680:CDS | 10.0% |
| !! | TTTGAACAAAAGAATAATAA+TGG | + | chr7_2:74135813-74135832 | Msa1075680:CDS | 15.0% |
| !! | TTTAAACAAATACTTAATTG+AGG | - | chr7_2:74137949-74137968 | None:intergenic | 15.0% |
| !!! | ATATTTTCTTATTCAATACA+TGG | + | chr7_2:74138113-74138132 | Msa1075680:CDS | 15.0% |
| !!! | TCGTTGTTTTAAAAATATGT+GGG | + | chr7_2:74135280-74135299 | Msa1075680:intron | 20.0% |
| !! | TTAGTCAATATGAAACAAAT+TGG | + | chr7_2:74135523-74135542 | Msa1075680:CDS | 20.0% |
| !! | TAGTCAATATGAAACAAATT+GGG | + | chr7_2:74135524-74135543 | Msa1075680:CDS | 20.0% |
| !!! | TTTTTAATCGAATCTTGTAA+AGG | - | chr7_2:74135588-74135607 | None:intergenic | 20.0% |
| !! | CAAATCTGTAAAATTTAATG+AGG | - | chr7_2:74135876-74135895 | None:intergenic | 20.0% |
| !!! | CTCATTAAATTTTACAGATT+TGG | + | chr7_2:74135874-74135893 | Msa1075680:intron | 20.0% |
| !!! | AAATTTGATTCTGGTTTTAA+TGG | + | chr7_2:74136205-74136224 | Msa1075680:CDS | 20.0% |
| !!! | TCATGCAAAATTTTTCAAAA+TGG | + | chr7_2:74136561-74136580 | Msa1075680:CDS | 20.0% |
| !!! | AAAATTTTTCAAAATGGCAA+GGG | + | chr7_2:74136567-74136586 | Msa1075680:CDS | 20.0% |
| !! | TCTTAAACTTAGGTTAATTT+CGG | + | chr7_2:74136621-74136640 | Msa1075680:CDS | 20.0% |
| !!! | TTTTTGTTCTTTTGTAAACA+GGG | - | chr7_2:74137806-74137825 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTCTTTTGTAAAC+AGG | - | chr7_2:74137807-74137826 | None:intergenic | 20.0% |
| !! | GTTTACAAAAGAACAAAAAA+TGG | + | chr7_2:74137807-74137826 | Msa1075680:CDS | 20.0% |
| !! | AAAAATTTGAAGCCAAACTT+AGG | + | chr7_2:74135014-74135033 | Msa1075680:CDS | 25.0% |
| !! | TCAAACTGTGAACAATATTT+TGG | + | chr7_2:74135096-74135115 | Msa1075680:CDS | 25.0% |
| !! | CAAACTGTGAACAATATTTT+GGG | + | chr7_2:74135097-74135116 | Msa1075680:CDS | 25.0% |
| !! | AAACTGTGAACAATATTTTG+GGG | + | chr7_2:74135098-74135117 | Msa1075680:CDS | 25.0% |
| !!! | AATATTTTGGGGAAAAGAAA+GGG | + | chr7_2:74135109-74135128 | Msa1075680:CDS | 25.0% |
| !! | TGAATTGGAATAATCTTTTG+AGG | - | chr7_2:74135145-74135164 | None:intergenic | 25.0% |
| !! | ATTGTTACTAAAGAGTTGAT+TGG | - | chr7_2:74135185-74135204 | None:intergenic | 25.0% |
| ! | AATCAACTCTTTAGTAACAA+TGG | + | chr7_2:74135184-74135203 | Msa1075680:CDS | 25.0% |
| !!! | GTCGTTGTTTTAAAAATATG+TGG | + | chr7_2:74135279-74135298 | Msa1075680:intron | 25.0% |
| ! | CAACTTGTATCAACATTAAT+CGG | - | chr7_2:74135435-74135454 | None:intergenic | 25.0% |
| ! | CAAAATCATTATTGTTCTCA+GGG | - | chr7_2:74135632-74135651 | None:intergenic | 25.0% |
| ! | TCAAAATCATTATTGTTCTC+AGG | - | chr7_2:74135633-74135652 | None:intergenic | 25.0% |
| ! | TGATTCAGATTATAATCCAT+GGG | + | chr7_2:74135668-74135687 | Msa1075680:CDS | 25.0% |
| ! | AATATATCCTGTGTTTCATA+TGG | + | chr7_2:74135724-74135743 | Msa1075680:intron | 25.0% |
| ! | ACTTAAAAAGGGTAAACATA+TGG | + | chr7_2:74136006-74136025 | Msa1075680:CDS | 25.0% |
| !!! | CAAAATTTTTCAAAATGGCA+AGG | + | chr7_2:74136566-74136585 | Msa1075680:CDS | 25.0% |
| !! | ATTAACCTAAGTTTAAGATC+CGG | - | chr7_2:74136619-74136638 | None:intergenic | 25.0% |
| ! | AAAAAGTAAAGGATATTGGT+AGG | - | chr7_2:74136806-74136825 | None:intergenic | 25.0% |
| ! | ATGGAAAAAGTAAAGGATAT+TGG | - | chr7_2:74136810-74136829 | None:intergenic | 25.0% |
| !!! | TATCCTTTACTTTTTCCATA+TGG | + | chr7_2:74136811-74136830 | Msa1075680:CDS | 25.0% |
| !! | TTTTCTCTATGTGCAATATT+GGG | - | chr7_2:74136853-74136872 | None:intergenic | 25.0% |
| !! | ATTTTCTCTATGTGCAATAT+TGG | - | chr7_2:74136854-74136873 | None:intergenic | 25.0% |
| ! | CAAAGGTTAACAAACATAAT+AGG | + | chr7_2:74136893-74136912 | Msa1075680:CDS | 25.0% |
| ! | AAAAGAATCAAACAAAGCTT+AGG | + | chr7_2:74137058-74137077 | Msa1075680:CDS | 25.0% |
| ! | AAAGAATCAAACAAAGCTTA+GGG | + | chr7_2:74137059-74137078 | Msa1075680:CDS | 25.0% |
| ! | AAGTCAACAAAATAATGTTG+AGG | + | chr7_2:74137110-74137129 | Msa1075680:CDS | 25.0% |
| ! | AGTCAACAAAATAATGTTGA+GGG | + | chr7_2:74137111-74137130 | Msa1075680:CDS | 25.0% |
| ! | GTAAAGGTAATAAATAGATC+AGG | - | chr7_2:74137246-74137265 | None:intergenic | 25.0% |
| ! | GTCAACAATCTTAAAATTTC+TGG | - | chr7_2:74137285-74137304 | None:intergenic | 25.0% |
| !! | ACTGTTTGATTTAACAAAGA+AGG | + | chr7_2:74137377-74137396 | Msa1075680:CDS | 25.0% |
| !! | CTGTTTGATTTAACAAAGAA+GGG | + | chr7_2:74137378-74137397 | Msa1075680:CDS | 25.0% |
| ! | TTAACTAAATCGTACAATTC+TGG | - | chr7_2:74137657-74137676 | None:intergenic | 25.0% |
| ! | AGAATTGTACGATTTAGTTA+AGG | + | chr7_2:74137656-74137675 | Msa1075680:CDS | 25.0% |
| ! | TATAAAGATCATGAGCAAAT+TGG | + | chr7_2:74138194-74138213 | Msa1075680:CDS | 25.0% |
| ! | TAAGTTAATAACTTTGCTTC+TGG | - | chr7_2:74138290-74138309 | None:intergenic | 25.0% |
| !!! | TAAAGAACTCAGATTTGTTA+AGG | + | chr7_2:74138472-74138491 | Msa1075680:CDS | 25.0% |
| !!! | AAAGAACTCAGATTTGTTAA+GGG | + | chr7_2:74138473-74138492 | Msa1075680:CDS | 25.0% |
| ACAGTTTGATTAACAGAAGA+CGG | - | chr7_2:74135085-74135104 | None:intergenic | 30.0% | |
| !! | CAATATTTTGGGGAAAAGAA+AGG | + | chr7_2:74135108-74135127 | Msa1075680:CDS | 30.0% |
| CTGATTCAGATTATAATCCA+TGG | + | chr7_2:74135667-74135686 | Msa1075680:CDS | 30.0% | |
| TATAATCCATGGGAAAATTC+AGG | + | chr7_2:74135678-74135697 | Msa1075680:CDS | 30.0% | |
| CAATAAGGACACTCAAATAA+AGG | - | chr7_2:74135959-74135978 | None:intergenic | 30.0% | |
| TTATTTGAGTGTCCTTATTG+CGG | + | chr7_2:74135959-74135978 | Msa1075680:CDS | 30.0% | |
| TACAACGAACGACTTAAAAA+GGG | + | chr7_2:74135995-74136014 | Msa1075680:CDS | 30.0% | |
| ! | CTAAGAAAGTTTTTACTCTC+TGG | - | chr7_2:74136136-74136155 | None:intergenic | 30.0% |
| GAAATACAGAATCGAATTCA+CGG | + | chr7_2:74136349-74136368 | Msa1075680:CDS | 30.0% | |
| !!! | TTTTATGTTTTGATGAGCCT+AGG | + | chr7_2:74136397-74136416 | Msa1075680:intron | 30.0% |
| ! | TTGTTATTCCTGTAAGACAA+CGG | - | chr7_2:74136484-74136503 | None:intergenic | 30.0% |
| ! | TTAACCTAAGTTTAAGATCC+GGG | - | chr7_2:74136618-74136637 | None:intergenic | 30.0% |
| ATTTCGGATAGAAAAACTGA+TGG | + | chr7_2:74136637-74136656 | Msa1075680:CDS | 30.0% | |
| ATAGGTTAACAATTAGAGAG+TGG | + | chr7_2:74136911-74136930 | Msa1075680:CDS | 30.0% | |
| ! | AAGATTGCTCCAAGAATTTT+TGG | + | chr7_2:74136990-74137009 | Msa1075680:CDS | 30.0% |
| ATGGATCAACTTTACTTTGA+TGG | + | chr7_2:74137192-74137211 | Msa1075680:CDS | 30.0% | |
| TCAACTTTACTTTGATGGAA+TGG | + | chr7_2:74137197-74137216 | Msa1075680:CDS | 30.0% | |
| !! | CTTAAAATTTCTGGCCATTT+CGG | - | chr7_2:74137276-74137295 | None:intergenic | 30.0% |
| TTTAACAAAGAAGGGAATGT+TGG | + | chr7_2:74137386-74137405 | Msa1075680:CDS | 30.0% | |
| TTAACAAAGAAGGGAATGTT+GGG | + | chr7_2:74137387-74137406 | Msa1075680:CDS | 30.0% | |
| ACAATTGAGTTTCAGAAAAG+AGG | + | chr7_2:74137522-74137541 | Msa1075680:CDS | 30.0% | |
| !! | TACAATTCTGGTTTCTTTAG+AGG | - | chr7_2:74137645-74137664 | None:intergenic | 30.0% |
| GATATTTGAGAAGCAAAGTT+GGG | - | chr7_2:74137890-74137909 | None:intergenic | 30.0% | |
| TGATATTTGAGAAGCAAAGT+TGG | - | chr7_2:74137891-74137910 | None:intergenic | 30.0% | |
| ATATCAAGCTCACATAAACA+TGG | + | chr7_2:74137905-74137924 | Msa1075680:CDS | 30.0% | |
| AGATTGTTCTTTCATGATGA+GGG | + | chr7_2:74138155-74138174 | Msa1075680:CDS | 30.0% | |
| ATGTGAAGAAAACAAGATCA+TGG | + | chr7_2:74138336-74138355 | Msa1075680:CDS | 30.0% | |
| CTGAGTTCTTTATAAGATGT+TGG | - | chr7_2:74138464-74138483 | None:intergenic | 30.0% | |
| !!! | ATAATCTTTTGAGGTCTACC+AGG | - | chr7_2:74135136-74135155 | None:intergenic | 35.0% |
| TCCAATTCAATCTCAGTTGT+TGG | + | chr7_2:74135156-74135175 | Msa1075680:CDS | 35.0% | |
| CCAATTCAATCTCAGTTGTT+GGG | + | chr7_2:74135157-74135176 | Msa1075680:CDS | 35.0% | |
| CAATTCAATCTCAGTTGTTG+GGG | + | chr7_2:74135158-74135177 | Msa1075680:CDS | 35.0% | |
| TTCAAAGAATCTGTGTCAAC+AGG | - | chr7_2:74135348-74135367 | None:intergenic | 35.0% | |
| CGCAAACGATTGAATCAAAT+TGG | + | chr7_2:74135369-74135388 | Msa1075680:CDS | 35.0% | |
| ACGATTGAATCAAATTGGAG+TGG | + | chr7_2:74135374-74135393 | Msa1075680:CDS | 35.0% | |
| ! | CATCACCATATGCAAGATTT+TGG | - | chr7_2:74135551-74135570 | None:intergenic | 35.0% |
| ! | AAATCTTGCATATGGTGATG+TGG | + | chr7_2:74135551-74135570 | Msa1075680:CDS | 35.0% |
| ! | TGATTACCTGAATTTTCCCA+TGG | - | chr7_2:74135687-74135706 | None:intergenic | 35.0% |
| GTAGCAAGTTATGAAGATCT+TGG | + | chr7_2:74135929-74135948 | Msa1075680:intron | 35.0% | |
| GTACAACGAACGACTTAAAA+AGG | + | chr7_2:74135994-74136013 | Msa1075680:CDS | 35.0% | |
| CCACAGCACAAAGAAAATTT+GGG | - | chr7_2:74136037-74136056 | None:intergenic | 35.0% | |
| ACCACAGCACAAAGAAAATT+TGG | - | chr7_2:74136038-74136057 | None:intergenic | 35.0% | |
| ! | ATTTTCTTTGTGCTGTGGTA+AGG | + | chr7_2:74136039-74136058 | Msa1075680:CDS | 35.0% |
| ! | TTTTCTTTGTGCTGTGGTAA+GGG | + | chr7_2:74136040-74136059 | Msa1075680:CDS | 35.0% |
| AACAAATGTCTCAACAACTC+TGG | - | chr7_2:74136097-74136116 | None:intergenic | 35.0% | |
| TGACCTTGAATTCTAACTGT+AGG | - | chr7_2:74136244-74136263 | None:intergenic | 35.0% | |
| !! | TTCAAGGTCAGTTTTGTCAT+AGG | + | chr7_2:74136254-74136273 | Msa1075680:CDS | 35.0% |
| ATATAAAGTTGAGCGAACCT+AGG | - | chr7_2:74136313-74136332 | None:intergenic | 35.0% | |
| GCAACTAAATTTCAGAACCT+AGG | - | chr7_2:74136417-74136436 | None:intergenic | 35.0% | |
| ATGTATATCCGTTGTCTTAC+AGG | + | chr7_2:74136473-74136492 | Msa1075680:intron | 35.0% | |
| GATAGATTCTCGACAATAGT+AGG | - | chr7_2:74136517-74136536 | None:intergenic | 35.0% | |
| GAATTCTGATATAGATGTCC+CGG | + | chr7_2:74136597-74136616 | Msa1075680:CDS | 35.0% | |
| AACATCTCCTACGATTAATG+CGG | - | chr7_2:74136698-74136717 | None:intergenic | 35.0% | |
| GATATTATTATTCAAGCGCG+AGG | + | chr7_2:74136736-74136755 | Msa1075680:CDS | 35.0% | |
| TCGCCATATGGAAAAAGTAA+AGG | - | chr7_2:74136817-74136836 | None:intergenic | 35.0% | |
| ACAACTTGAGATCGTTACAA+AGG | + | chr7_2:74136876-74136895 | Msa1075680:CDS | 35.0% | |
| ! | TTGCATTTAGAATCCAGATG+AGG | + | chr7_2:74136935-74136954 | Msa1075680:CDS | 35.0% |
| ! | TGCATTTAGAATCCAGATGA+GGG | + | chr7_2:74136936-74136955 | Msa1075680:CDS | 35.0% |
| !! | ATTGCTCCAAGAATTTTTGG+TGG | + | chr7_2:74136993-74137012 | Msa1075680:CDS | 35.0% |
| ATCCATCCACCAAAAATTCT+TGG | - | chr7_2:74137002-74137021 | None:intergenic | 35.0% | |
| ! | GTTTTGCCATCTACTTATGT+TGG | + | chr7_2:74137156-74137175 | Msa1075680:CDS | 35.0% |
| ATGGCTATATGTAGCAAAGT+CGG | + | chr7_2:74137216-74137235 | Msa1075680:CDS | 35.0% | |
| CCATTTCGGATTACATGTAA+AGG | - | chr7_2:74137262-74137281 | None:intergenic | 35.0% | |
| CCTTTACATGTAATCCGAAA+TGG | + | chr7_2:74137259-74137278 | Msa1075680:CDS | 35.0% | |
| AAGATCCTTGATACAATGTC+TGG | - | chr7_2:74137336-74137355 | None:intergenic | 35.0% | |
| TAACAAAGAAGGGAATGTTG+GGG | + | chr7_2:74137388-74137407 | Msa1075680:CDS | 35.0% | |
| AAAAGCAGAATATGTGCATG+AGG | - | chr7_2:74137552-74137571 | None:intergenic | 35.0% | |
| ! | GATATTTGTTTGATGGATGC+AGG | - | chr7_2:74137575-74137594 | None:intergenic | 35.0% |
| GGAGTAGGATATTTGTTTGA+TGG | - | chr7_2:74137582-74137601 | None:intergenic | 35.0% | |
| ! | ATGATTTTGTCGATGTCATC+TGG | - | chr7_2:74137603-74137622 | None:intergenic | 35.0% |
| AATCATTTCTGCAGAGATAC+CGG | + | chr7_2:74137617-74137636 | Msa1075680:CDS | 35.0% | |
| AGAAGCAAAGTTGGGTTATA+CGG | - | chr7_2:74137882-74137901 | None:intergenic | 35.0% | |
| AAGCTCACATAAACATGGAA+TGG | + | chr7_2:74137910-74137929 | Msa1075680:CDS | 35.0% | |
| ACATTAATAAGGGTTCAGAC+AGG | + | chr7_2:74137970-74137989 | Msa1075680:CDS | 35.0% | |
| GAGATTGTTCTTTCATGATG+AGG | + | chr7_2:74138154-74138173 | Msa1075680:CDS | 35.0% | |
| !! | AACATCGATTCAGTTACACT+TGG | - | chr7_2:74138236-74138255 | None:intergenic | 35.0% |
| AAACAAGATCATGGAAACCT+CGG | + | chr7_2:74138345-74138364 | Msa1075680:CDS | 35.0% | |
| GAGCAAGAAGGATGGATATT+CGG | + | chr7_2:74135038-74135057 | Msa1075680:CDS | 40.0% | |
| CCCAACAACTGAGATTGAAT+TGG | - | chr7_2:74135160-74135179 | None:intergenic | 40.0% | |
| GTGGTAGAGCATGATCAAAT+AGG | + | chr7_2:74135393-74135412 | Msa1075680:CDS | 40.0% | |
| GTAGAGCATGATCAAATAGG+AGG | + | chr7_2:74135396-74135415 | Msa1075680:CDS | 40.0% | |
| TGGGTCCAAAATCTTGCATA+TGG | + | chr7_2:74135543-74135562 | Msa1075680:CDS | 40.0% | |
| CAATGAGCCATATGAAACAC+AGG | - | chr7_2:74135734-74135753 | None:intergenic | 40.0% | |
| TCTAGCAGTGAAGATGATGA+TGG | + | chr7_2:74135780-74135799 | Msa1075680:CDS | 40.0% | |
| !! | CAGTGAAGATGATGATGGAT+GGG | + | chr7_2:74135785-74135804 | Msa1075680:CDS | 40.0% |
| !! | AGTGAAGATGATGATGGATG+GGG | + | chr7_2:74135786-74135805 | Msa1075680:CDS | 40.0% |
| ! | CCCAAATTTTCTTTGTGCTG+TGG | + | chr7_2:74136034-74136053 | Msa1075680:CDS | 40.0% |
| AAATGTCTCAACAACTCTGG+AGG | - | chr7_2:74136094-74136113 | None:intergenic | 40.0% | |
| ATGTTTGCATTTACGTCACC+TGG | + | chr7_2:74136178-74136197 | Msa1075680:CDS | 40.0% | |
| ! | CCAGAATCAAATTTTGCTCC+AGG | - | chr7_2:74136199-74136218 | None:intergenic | 40.0% |
| CCTGGAGCAAAATTTGATTC+TGG | + | chr7_2:74136196-74136215 | Msa1075680:CDS | 40.0% | |
| !!! | TCTGGTTTTAATGGTCGAAG+AGG | + | chr7_2:74136214-74136233 | Msa1075680:CDS | 40.0% |
| !!! | CTGGTTTTAATGGTCGAAGA+GGG | + | chr7_2:74136215-74136234 | Msa1075680:CDS | 40.0% |
| CCTTGAATTCTAACTGTAGG+TGG | - | chr7_2:74136241-74136260 | None:intergenic | 40.0% | |
| CCACCTACAGTTAGAATTCA+AGG | + | chr7_2:74136238-74136257 | Msa1075680:CDS | 40.0% | |
| !! | GGTCAGTTTTGTCATAGGAT+TGG | + | chr7_2:74136259-74136278 | Msa1075680:CDS | 40.0% |
| !! | GATTGGTAGTTTGTTGCCAA+AGG | + | chr7_2:74136276-74136295 | Msa1075680:CDS | 40.0% |
| AGAATCGAATTCACGGAGTA+AGG | + | chr7_2:74136356-74136375 | Msa1075680:CDS | 40.0% | |
| ATGTCCCGGATCTTAAACTT+AGG | + | chr7_2:74136611-74136630 | Msa1075680:CDS | 40.0% | |
| TACGATTAATGCGGCAACTT+CGG | - | chr7_2:74136689-74136708 | None:intergenic | 40.0% | |
| ATTATTATTCAAGCGCGAGG+TGG | + | chr7_2:74136739-74136758 | Msa1075680:CDS | 40.0% | |
| ! | CTTTTTCCATATGGCGAAGA+TGG | + | chr7_2:74136820-74136839 | Msa1075680:CDS | 40.0% |
| CTATATCCATCTTCGCCATA+TGG | - | chr7_2:74136829-74136848 | None:intergenic | 40.0% | |
| !!! | CTCCAAGAATTTTTGGTGGA+TGG | + | chr7_2:74136997-74137016 | Msa1075680:CDS | 40.0% |
| TTGCCATCTACTTATGTTGG+AGG | + | chr7_2:74137159-74137178 | Msa1075680:CDS | 40.0% | |
| ATCGACCAGACATTGTATCA+AGG | + | chr7_2:74137328-74137347 | Msa1075680:CDS | 40.0% | |
| ! | TCTGGTTTCTTTAGAGGATC+CGG | - | chr7_2:74137639-74137658 | None:intergenic | 40.0% |
| GTTAAGGCACACATGATTCA+TGG | + | chr7_2:74137672-74137691 | Msa1075680:CDS | 40.0% | |
| !! | CTTTGATTTGCCAAACCACA+TGG | - | chr7_2:74137699-74137718 | None:intergenic | 40.0% |
| !!! | GTCGATGGCTGGAATTTTTT+CGG | - | chr7_2:74137762-74137781 | None:intergenic | 40.0% |
| TCTTGATCAACAATCGTCGA+TGG | - | chr7_2:74137777-74137796 | None:intergenic | 40.0% | |
| TCGACGATTGTTGATCAAGA+AGG | + | chr7_2:74137777-74137796 | Msa1075680:CDS | 40.0% | |
| CGACGATTGTTGATCAAGAA+GGG | + | chr7_2:74137778-74137797 | Msa1075680:CDS | 40.0% | |
| TTTCAGCAAGTGAAGCATGT+TGG | + | chr7_2:74138087-74138106 | Msa1075680:CDS | 40.0% | |
| AAGAACAATCTCTCTACAGC+AGG | - | chr7_2:74138146-74138165 | None:intergenic | 40.0% | |
| CTGAATCGATGTTCACTTCT+TGG | + | chr7_2:74138243-74138262 | Msa1075680:CDS | 40.0% | |
| ATCGATGTTCACTTCTTGGA+TGG | + | chr7_2:74138247-74138266 | Msa1075680:CDS | 40.0% | |
| AACAAGATCATGGAAACCTC+GGG | + | chr7_2:74138346-74138365 | Msa1075680:CDS | 40.0% | |
| ATACCATTGGGAGACTCATT+TGG | + | chr7_2:74138378-74138397 | Msa1075680:CDS | 40.0% | |
| TACCATTGGGAGACTCATTT+GGG | + | chr7_2:74138379-74138398 | Msa1075680:CDS | 40.0% | |
| TACAATTCTCCAGTACTTCG+AGG | - | chr7_2:74138407-74138426 | None:intergenic | 40.0% | |
| CCTTCTTGCTCTCCTAAGTT+TGG | - | chr7_2:74135029-74135048 | None:intergenic | 45.0% | |
| CCAAACTTAGGAGAGCAAGA+AGG | + | chr7_2:74135026-74135045 | Msa1075680:CDS | 45.0% | |
| ACTTAGGAGAGCAAGAAGGA+TGG | + | chr7_2:74135030-74135049 | Msa1075680:CDS | 45.0% | |
| !! | GCAGTGAAGATGATGATGGA+TGG | + | chr7_2:74135784-74135803 | Msa1075680:CDS | 45.0% |
| TCGTTCGTTGTACCACAAAC+AGG | - | chr7_2:74135987-74136006 | None:intergenic | 45.0% | |
| !! | GGTAGTTTGTTGCCAAAGGA+TGG | + | chr7_2:74136280-74136299 | Msa1075680:CDS | 45.0% |
| TTTGTTGCCAAAGGATGGAG+AGG | + | chr7_2:74136285-74136304 | Msa1075680:CDS | 45.0% | |
| GAAGTTGCCGCATTAATCGT+AGG | + | chr7_2:74136688-74136707 | Msa1075680:CDS | 45.0% | |
| !! | AATCCAGATGAGGGCATTTG+AGG | + | chr7_2:74136945-74136964 | Msa1075680:CDS | 45.0% |
| !! | ATCCAGATGAGGGCATTTGA+GGG | + | chr7_2:74136946-74136965 | Msa1075680:CDS | 45.0% |
| ! | GGTGGATGGATTCACAATGT+TGG | + | chr7_2:74137011-74137030 | Msa1075680:CDS | 45.0% |
| ! | GGATGGATTCACAATGTTGG+AGG | + | chr7_2:74137014-74137033 | Msa1075680:CDS | 45.0% |
| TGGAGGCAGAGAAATTGAGA+TGG | + | chr7_2:74137031-74137050 | Msa1075680:CDS | 45.0% | |
| AATGTTGAGGGCTCTGCAAA+AGG | + | chr7_2:74137123-74137142 | Msa1075680:CDS | 45.0% | |
| CGACCTCCAACATAAGTAGA+TGG | - | chr7_2:74137165-74137184 | None:intergenic | 45.0% | |
| !! | TGTTGGAGGTCGTCGTTTTA+TGG | + | chr7_2:74137173-74137192 | Msa1075680:CDS | 45.0% |
| ! | TTGTCGATGTCATCTGGAGT+AGG | - | chr7_2:74137597-74137616 | None:intergenic | 45.0% |
| CACATGATTCATGGTCCATG+TGG | + | chr7_2:74137681-74137700 | Msa1075680:CDS | 45.0% | |
| GATTCATGGTCCATGTGGTT+TGG | + | chr7_2:74137686-74137705 | Msa1075680:CDS | 45.0% | |
| AGTTCACCATGCATGAGAGA+TGG | + | chr7_2:74137717-74137736 | Msa1075680:CDS | 45.0% | |
| AATGGTCGCACGATAGAGAA+AGG | + | chr7_2:74137825-74137844 | Msa1075680:CDS | 45.0% | |
| GACGAAGCTTGATGTTCGTT+AGG | - | chr7_2:74138014-74138033 | None:intergenic | 45.0% | |
| ATCATGGAAACCTCGGGAAA+AGG | + | chr7_2:74138352-74138371 | Msa1075680:CDS | 45.0% | |
| TCATGGAAACCTCGGGAAAA+GGG | + | chr7_2:74138353-74138372 | Msa1075680:CDS | 45.0% | |
| GGGAAAAGGGCTATACCATT+GGG | + | chr7_2:74138366-74138385 | Msa1075680:CDS | 45.0% | |
| !! | ATATATATTAATAATGTATT+TGG | - | chr7_2:74136442-74136461 | None:intergenic | 5.0% |
| TTGGGGAAAAGAAAGGGACC+TGG | + | chr7_2:74135115-74135134 | Msa1075680:CDS | 50.0% | |
| ! | CACAAACAGGCACCGCAATA+AGG | - | chr7_2:74135974-74135993 | None:intergenic | 50.0% |
| CTTATTGCGGTGCCTGTTTG+TGG | + | chr7_2:74135972-74135991 | Msa1075680:CDS | 50.0% | |
| ! | TCTGGAGGTTCTGGCAAAGT+TGG | - | chr7_2:74136079-74136098 | None:intergenic | 50.0% |
| ! | CTCAACAACTCTGGAGGTTC+TGG | - | chr7_2:74136088-74136107 | None:intergenic | 50.0% |
| CGGCAACTTCGGATACAGTT+GGG | - | chr7_2:74136678-74136697 | None:intergenic | 50.0% | |
| TCATGAGCTCTCTGACGCAA+AGG | - | chr7_2:74137309-74137328 | None:intergenic | 50.0% | |
| CACCATGCATGAGAGATGGA+AGG | + | chr7_2:74137721-74137740 | Msa1075680:CDS | 50.0% | |
| CACCTTCCATCTCTCATGCA+TGG | - | chr7_2:74137726-74137745 | None:intergenic | 50.0% | |
| GATCAACAATCGTCGATGGC+TGG | - | chr7_2:74137773-74137792 | None:intergenic | 50.0% | |
| ! | ATGGTATAGCCCTTTTCCCG+AGG | - | chr7_2:74138365-74138384 | None:intergenic | 50.0% |
| CGGGAAAAGGGCTATACCAT+TGG | + | chr7_2:74138365-74138384 | Msa1075680:CDS | 50.0% | |
| CACCCAAATGAGTCTCCCAA+TGG | - | chr7_2:74138384-74138403 | None:intergenic | 50.0% | |
| ATTTGGGTGCCTCGAAGTAC+TGG | + | chr7_2:74138395-74138414 | Msa1075680:CDS | 50.0% | |
| AATGATGCTGACCGTCGCTA+GGG | + | chr7_2:74138436-74138455 | Msa1075680:CDS | 50.0% | |
| CTAGGAGCCTCTCCATCCTT+TGG | - | chr7_2:74136295-74136314 | None:intergenic | 55.0% | |
| CAAAGGATGGAGAGGCTCCT+AGG | + | chr7_2:74136293-74136312 | Msa1075680:CDS | 55.0% | |
| GCGGCAACTTCGGATACAGT+TGG | - | chr7_2:74136679-74136698 | None:intergenic | 55.0% | |
| CGCGAGGTGGTCACTTACAA+AGG | + | chr7_2:74136752-74136771 | Msa1075680:CDS | 55.0% | |
| GTCCCTCAAATGCCCTCATC+TGG | - | chr7_2:74136951-74136970 | None:intergenic | 55.0% | |
| GGGAATGTTGGGGAAAGTCG+TGG | + | chr7_2:74137398-74137417 | Msa1075680:CDS | 55.0% | |
| GGGGAAAGTCGTGGCATGTA+AGG | + | chr7_2:74137407-74137426 | Msa1075680:intron | 55.0% | |
| GAATGATGCTGACCGTCGCT+AGG | + | chr7_2:74138435-74138454 | Msa1075680:CDS | 55.0% | |
| ATGATGCTGACCGTCGCTAG+GGG | + | chr7_2:74138437-74138456 | Msa1075680:CDS | 55.0% | |
| AGATGTTGGACCCCTAGCGA+CGG | - | chr7_2:74138450-74138469 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 74134992 | 74138502 | 74134992 | ID=Msa1075680;Name=Msa1075680 |
| chr7_2 | mRNA | 74134992 | 74138502 | 74134992 | ID=Msa1075680-mRNA-1;Parent=Msa1075680;Name=Msa1075680-mRNA-1;_AED=0.57;_eAED=0.57;_QI=0|0|0|0.83|1|1|6|0|996 |
| chr7_2 | exon | 74134992 | 74135205 | 74134992 | ID=Msa1075680-mRNA-1:exon:17351;Parent=Msa1075680-mRNA-1 |
| chr7_2 | exon | 74135358 | 74135699 | 74135358 | ID=Msa1075680-mRNA-1:exon:17352;Parent=Msa1075680-mRNA-1 |
| chr7_2 | exon | 74135778 | 74135849 | 74135778 | ID=Msa1075680-mRNA-1:exon:17353;Parent=Msa1075680-mRNA-1 |
| chr7_2 | exon | 74135933 | 74136377 | 74135933 | ID=Msa1075680-mRNA-1:exon:17354;Parent=Msa1075680-mRNA-1 |
| chr7_2 | exon | 74136495 | 74137423 | 74136495 | ID=Msa1075680-mRNA-1:exon:17355;Parent=Msa1075680-mRNA-1 |
| chr7_2 | exon | 74137514 | 74138502 | 74137514 | ID=Msa1075680-mRNA-1:exon:17356;Parent=Msa1075680-mRNA-1 |
| chr7_2 | CDS | 74134992 | 74135205 | 74134992 | ID=Msa1075680-mRNA-1:cds;Parent=Msa1075680-mRNA-1 |
| chr7_2 | CDS | 74135358 | 74135699 | 74135358 | ID=Msa1075680-mRNA-1:cds;Parent=Msa1075680-mRNA-1 |
| chr7_2 | CDS | 74135778 | 74135849 | 74135778 | ID=Msa1075680-mRNA-1:cds;Parent=Msa1075680-mRNA-1 |
| chr7_2 | CDS | 74135933 | 74136377 | 74135933 | ID=Msa1075680-mRNA-1:cds;Parent=Msa1075680-mRNA-1 |
| chr7_2 | CDS | 74136495 | 74137423 | 74136495 | ID=Msa1075680-mRNA-1:cds;Parent=Msa1075680-mRNA-1 |
| chr7_2 | CDS | 74137514 | 74138502 | 74137514 | ID=Msa1075680-mRNA-1:cds;Parent=Msa1075680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
