Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075910 | XP_013449716.1 | 96.833 | 442 | 14 | 0 | 1 | 442 | 1 | 442 | 0.0 | 879 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075910 | sp|Q9SJE8|ALMT2_ARATH | 37.105 | 380 | 226 | 5 | 61 | 431 | 18 | 393 | 1.79e-81 | 263 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075910 | A0A072U214 | 96.833 | 442 | 14 | 0 | 1 | 442 | 1 | 442 | 0.0 | 879 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1017750 | Msa1075910 | 0.863626 | 2.177338e-64 | -8.615850e-47 |
| Msa1075910 | Msa1117080 | 0.858488 | 7.958828e-63 | -8.615850e-47 |
| Msa1075910 | Msa1117220 | 0.870509 | 1.382979e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075910 | MtrunA17_Chr7g0259731 | 96.833 | 442 | 14 | 0 | 1 | 442 | 1 | 442 | 0.0 | 879 |
| Msa1075910 | MtrunA17_Chr4g0025591 | 37.179 | 390 | 237 | 4 | 53 | 439 | 39 | 423 | 7.39e-83 | 262 |
| Msa1075910 | MtrunA17_Chr1g0212251 | 40.823 | 316 | 178 | 4 | 61 | 371 | 42 | 353 | 1.18e-82 | 264 |
| Msa1075910 | MtrunA17_Chr7g0267471 | 39.646 | 396 | 232 | 6 | 47 | 441 | 35 | 424 | 1.22e-81 | 259 |
| Msa1075910 | MtrunA17_Chr1g0188871 | 36.224 | 392 | 235 | 4 | 60 | 440 | 50 | 437 | 6.06e-81 | 258 |
| Msa1075910 | MtrunA17_Chr2g0321971 | 36.693 | 387 | 235 | 5 | 61 | 442 | 42 | 423 | 3.11e-78 | 250 |
| Msa1075910 | MtrunA17_Chr1g0188881 | 35.661 | 401 | 231 | 6 | 60 | 440 | 56 | 449 | 4.21e-78 | 250 |
| Msa1075910 | MtrunA17_Chr1g0212201 | 39.172 | 314 | 181 | 4 | 61 | 368 | 46 | 355 | 5.35e-77 | 249 |
| Msa1075910 | MtrunA17_Chr4g0054741 | 40.938 | 320 | 175 | 4 | 61 | 372 | 54 | 367 | 1.21e-72 | 238 |
| Msa1075910 | MtrunA17_Chr2g0321961 | 36.317 | 391 | 237 | 6 | 54 | 439 | 36 | 419 | 2.65e-72 | 234 |
| Msa1075910 | MtrunA17_Chr1g0212291 | 39.117 | 317 | 183 | 4 | 61 | 371 | 43 | 355 | 4.81e-70 | 231 |
| Msa1075910 | MtrunA17_Chr8g0390931 | 33.433 | 335 | 214 | 7 | 61 | 393 | 64 | 391 | 4.31e-57 | 197 |
| Msa1075910 | MtrunA17_Chr1g0210101 | 31.707 | 328 | 205 | 6 | 61 | 376 | 118 | 438 | 1.19e-55 | 194 |
| Msa1075910 | MtrunA17_Chr6g0484691 | 34.795 | 342 | 204 | 9 | 61 | 389 | 89 | 424 | 2.45e-55 | 193 |
| Msa1075910 | MtrunA17_Chr8g0390921 | 33.430 | 344 | 201 | 10 | 61 | 387 | 65 | 397 | 1.04e-49 | 177 |
| Msa1075910 | MtrunA17_Chr8g0390901 | 31.987 | 297 | 174 | 10 | 110 | 389 | 9 | 294 | 1.58e-41 | 153 |
| Msa1075910 | MtrunA17_Chr5g0400471 | 30.612 | 294 | 167 | 5 | 112 | 372 | 3 | 292 | 1.46e-40 | 150 |
| Msa1075910 | MtrunA17_Chr4g0054771 | 34.081 | 223 | 133 | 4 | 158 | 372 | 3 | 219 | 2.24e-37 | 140 |
| Msa1075910 | MtrunA17_Chr4g0054761 | 53.061 | 98 | 46 | 0 | 61 | 158 | 54 | 151 | 5.95e-15 | 72.4 |
| Msa1075910 | MtrunA17_Chr5g0400481 | 53.704 | 54 | 25 | 0 | 61 | 114 | 62 | 115 | 1.37e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075910 | AT2G27240.2 | 35.369 | 393 | 234 | 4 | 61 | 442 | 18 | 401 | 1.72e-82 | 262 |
| Msa1075910 | AT1G08440.1 | 37.105 | 380 | 226 | 5 | 61 | 431 | 18 | 393 | 1.82e-82 | 263 |
| Msa1075910 | AT4G17970.1 | 41.270 | 315 | 178 | 3 | 61 | 372 | 44 | 354 | 3.25e-82 | 264 |
| Msa1075910 | AT5G46600.1 | 41.121 | 321 | 176 | 4 | 61 | 372 | 47 | 363 | 9.94e-82 | 262 |
| Msa1075910 | AT5G46610.1 | 38.123 | 341 | 200 | 4 | 61 | 395 | 46 | 381 | 1.07e-80 | 259 |
| Msa1075910 | AT4G00910.1 | 38.200 | 411 | 214 | 7 | 61 | 439 | 63 | 465 | 1.46e-79 | 254 |
| Msa1075910 | AT2G27240.1 | 33.729 | 421 | 229 | 5 | 61 | 442 | 18 | 427 | 1.34e-78 | 253 |
| Msa1075910 | AT1G08430.1 | 33.842 | 393 | 243 | 5 | 61 | 442 | 18 | 404 | 3.28e-76 | 246 |
| Msa1075910 | AT3G11680.1 | 37.037 | 405 | 239 | 8 | 46 | 440 | 21 | 419 | 2.23e-73 | 239 |
| Msa1075910 | AT3G11680.2 | 37.037 | 405 | 239 | 8 | 46 | 440 | 23 | 421 | 2.57e-73 | 238 |
| Msa1075910 | AT5G46610.2 | 34.018 | 341 | 190 | 5 | 61 | 395 | 46 | 357 | 8.85e-65 | 217 |
| Msa1075910 | AT3G18440.1 | 33.746 | 323 | 196 | 6 | 61 | 371 | 84 | 400 | 4.86e-58 | 201 |
| Msa1075910 | AT1G18420.2 | 32.749 | 342 | 211 | 7 | 61 | 389 | 5 | 340 | 9.36e-58 | 198 |
| Msa1075910 | AT5G46610.3 | 33.019 | 318 | 156 | 4 | 61 | 372 | 46 | 312 | 7.47e-57 | 195 |
| Msa1075910 | AT1G18420.1 | 32.164 | 342 | 213 | 6 | 61 | 389 | 88 | 423 | 7.91e-57 | 197 |
| Msa1075910 | AT2G17470.1 | 30.226 | 354 | 214 | 8 | 61 | 395 | 36 | 375 | 9.44e-53 | 185 |
| Msa1075910 | AT2G17470.2 | 30.226 | 354 | 214 | 8 | 61 | 395 | 58 | 397 | 1.09e-52 | 186 |
| Msa1075910 | AT1G25480.1 | 32.759 | 348 | 213 | 9 | 61 | 395 | 64 | 403 | 5.71e-51 | 181 |
| Msa1075910 | AT1G68600.1 | 31.692 | 325 | 200 | 7 | 61 | 371 | 53 | 369 | 3.43e-48 | 173 |
Find 107 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATTAACCATTCACGATTT+TGG | 0.113499 | 7_2:-74313325 | Msa1075910:three_prime_UTR |
| TCCAGGCAAATTTCGCAAAA+TGG | 0.164609 | 7_2:-74314512 | Msa1075910:intron |
| TTCAATCTAGTGGTGGTATC+TGG | 0.184798 | 7_2:-74316219 | Msa1075910:CDS |
| TCCTTTGGGTTGGAAGTAAT+TGG | 0.187671 | 7_2:+74317068 | None:intergenic |
| GAACCATGGCATGGGAAATT+TGG | 0.190375 | 7_2:-74314489 | Msa1075910:CDS |
| ATCTATACCTTGTATTGTAT+TGG | 0.310244 | 7_2:+74316038 | None:intergenic |
| ACGTTTATTGAACATCCTAA+TGG | 0.327416 | 7_2:-74316157 | Msa1075910:CDS |
| ATAAAGAATAGATATGATTA+TGG | 0.344730 | 7_2:-74316264 | Msa1075910:CDS |
| GGGGAATTGGTTATAGAGGT+TGG | 0.364522 | 7_2:-74313465 | Msa1075910:CDS |
| CAAACTGTGAAGCTGGTATC+TGG | 0.367847 | 7_2:+74314702 | None:intergenic |
| TTAGAACAGTGCGAGGCAAT+AGG | 0.370252 | 7_2:-74313702 | Msa1075910:CDS |
| AGTAGGGGAATTGGTTATAG+AGG | 0.375086 | 7_2:-74313469 | Msa1075910:CDS |
| CCAGGCAAATTTCGCAAAAT+GGG | 0.378357 | 7_2:-74314511 | Msa1075910:intron |
| TTTGTTCGTCTTTCCTTTGT+GGG | 0.382042 | 7_2:-74316109 | Msa1075910:CDS |
| CGTTTATTGAACATCCTAAT+GGG | 0.385898 | 7_2:-74316156 | Msa1075910:CDS |
| TTTGGGTCATAAATTAGAAA+TGG | 0.389200 | 7_2:-74313307 | Msa1075910:three_prime_UTR |
| ATTTGTTCGTCTTTCCTTTG+TGG | 0.400228 | 7_2:-74316110 | Msa1075910:CDS |
| TGATGTATATAGAAAGATAA+TGG | 0.401299 | 7_2:+74313403 | None:intergenic |
| GGTGGAGAAAGTAGGGGAAT+TGG | 0.406410 | 7_2:-74313478 | Msa1075910:CDS |
| TCAATCTAGTGGTGGTATCT+GGG | 0.411812 | 7_2:-74316218 | Msa1075910:CDS |
| AACAAGAGAAGAGTTGAGTT+TGG | 0.413841 | 7_2:-74313583 | Msa1075910:CDS |
| AAAGGCTTGAATCGTGGAAT+AGG | 0.418626 | 7_2:-74316697 | Msa1075910:CDS |
| CAATGATTCATCCTTTGACT+TGG | 0.420523 | 7_2:+74314662 | None:intergenic |
| CAAGTCAAAGGATGAATCAT+TGG | 0.423723 | 7_2:-74314661 | Msa1075910:intron |
| TTGCGATAATGAAACCCATT+AGG | 0.434149 | 7_2:+74316142 | None:intergenic |
| GGTGTTCTTGCTCATGGAAG+TGG | 0.434740 | 7_2:-74313499 | Msa1075910:CDS |
| ACCATTGTAGGAGGAGGATT+GGG | 0.443083 | 7_2:-74316673 | Msa1075910:CDS |
| AAGGATACAAATACCCATCT+TGG | 0.446776 | 7_2:-74317116 | Msa1075910:CDS |
| GGTTGGAGAACTTCAAGATA+TGG | 0.452146 | 7_2:-74313448 | Msa1075910:CDS |
| GTGGTATCTGGGGCACGTCC+AGG | 0.458913 | 7_2:-74316207 | Msa1075910:CDS |
| AATCCTCTCTTTGATCAAGT+TGG | 0.459918 | 7_2:-74316942 | Msa1075910:CDS |
| TTCTATATACATCATAAAAC+CGG | 0.461714 | 7_2:-74313394 | Msa1075910:three_prime_UTR |
| GCACAAACCATTGGAGGAGT+TGG | 0.466211 | 7_2:-74316631 | Msa1075910:CDS |
| AAGAACACCAAGCTTGCAAT+TGG | 0.470071 | 7_2:+74313513 | None:intergenic |
| TTATTGTGTAGGTTGCTTGG+AGG | 0.470149 | 7_2:-74314754 | Msa1075910:intron |
| CGTGGAATAGGTACCATTGT+AGG | 0.470283 | 7_2:-74316685 | Msa1075910:CDS |
| TACCATTGTAGGAGGAGGAT+TGG | 0.470726 | 7_2:-74316674 | Msa1075910:CDS |
| ACATATGTATCAATATAGAT+AGG | 0.474060 | 7_2:-74313267 | Msa1075910:three_prime_UTR |
| TAGAACAGTGCGAGGCAATA+GGG | 0.479559 | 7_2:-74313701 | Msa1075910:CDS |
| AGCTGCACTCATTCTTGCAT+TGG | 0.481014 | 7_2:-74314412 | Msa1075910:CDS |
| TGGAAGTGGTGGAGAAAGTA+GGG | 0.481132 | 7_2:-74313485 | Msa1075910:CDS |
| TTATGACCCAAAATCGTGAA+TGG | 0.483023 | 7_2:+74313318 | None:intergenic |
| TTAGGAGCTACACTAGGAAA+AGG | 0.488102 | 7_2:-74316715 | Msa1075910:intron |
| CACGTCCAGGTGTGAAAGTG+TGG | 0.490957 | 7_2:-74316194 | Msa1075910:CDS |
| GTTATCTTCTTCATTTGCAA+TGG | 0.493557 | 7_2:+74317172 | None:intergenic |
| TAGAAAGATAATGGAGTTAG+CGG | 0.494161 | 7_2:+74313412 | None:intergenic |
| AGTAGGAATCTCACTTGTGT+TGG | 0.497276 | 7_2:-74316985 | Msa1075910:CDS |
| AAGCTTGGTGTTCTTGCTCA+TGG | 0.499851 | 7_2:-74313505 | Msa1075910:CDS |
| ATGGAAGTGGTGGAGAAAGT+AGG | 0.505241 | 7_2:-74313486 | Msa1075910:CDS |
| GTTGGAAGTAATTGGAACAA+TGG | 0.511349 | 7_2:+74317076 | None:intergenic |
| AGATACCACCACTAGATTGA+AGG | 0.513954 | 7_2:+74316221 | None:intergenic |
| GGAGAACTTCAAGATATGGC+TGG | 0.520095 | 7_2:-74313444 | Msa1075910:CDS |
| ATTCTCAAATTCTTCTATCA+CGG | 0.525151 | 7_2:+74313548 | None:intergenic |
| ATGATTCATAGCATCAAAGT+AGG | 0.536279 | 7_2:-74317002 | Msa1075910:CDS |
| AATGCTACCAATTGCAAGCT+TGG | 0.537222 | 7_2:-74313520 | Msa1075910:CDS |
| AGGAGGAGGATTGGGATGCT+TGG | 0.538361 | 7_2:-74316665 | Msa1075910:CDS |
| AATGAGAAAATGTGAAGGAA+GGG | 0.540840 | 7_2:-74313631 | Msa1075910:CDS |
| TGAGTTACCAACTCCTCCAA+TGG | 0.543076 | 7_2:+74316624 | None:intergenic |
| TTGGTCACAGTCCAAGTGAA+AGG | 0.545052 | 7_2:-74317247 | None:intergenic |
| GAATCATCTTCTTAATGTCA+TGG | 0.545845 | 7_2:+74317018 | None:intergenic |
| TGGTCACAGTCCAAGTGAAA+GGG | 0.547509 | 7_2:-74317246 | None:intergenic |
| CAATATTGCTCAAATGAAGA+AGG | 0.547816 | 7_2:-74317135 | Msa1075910:CDS |
| AAATGAGAAAATGTGAAGGA+AGG | 0.547954 | 7_2:-74313632 | Msa1075910:CDS |
| CAATCTAGTGGTGGTATCTG+GGG | 0.548080 | 7_2:-74316217 | Msa1075910:CDS |
| GTCATCTCTGAATTCAATGC+AGG | 0.549001 | 7_2:-74316885 | Msa1075910:intron |
| AATTCCCACACTTTCACACC+TGG | 0.549998 | 7_2:+74316189 | None:intergenic |
| GCAAAATGGGAACCATGGCA+TGG | 0.551020 | 7_2:-74314498 | Msa1075910:CDS |
| TCCAATTACTTCCAACCCAA+AGG | 0.554902 | 7_2:-74317069 | Msa1075910:CDS |
| TCCCAATCCTCCTCCTACAA+TGG | 0.555686 | 7_2:+74316672 | None:intergenic |
| GTGATAGAAGAATTTGAGAA+TGG | 0.556341 | 7_2:-74313546 | Msa1075910:CDS |
| AATCCAAATTTCCCATGCCA+TGG | 0.563773 | 7_2:+74314486 | None:intergenic |
| TATGCTGACCTTCAATCTAG+TGG | 0.564895 | 7_2:-74316229 | Msa1075910:CDS |
| GTGTGGACTCTACGAGAAGT+TGG | 0.565330 | 7_2:-74313669 | Msa1075910:CDS |
| GGAATCATGAAGTTCATCAC+TGG | 0.566162 | 7_2:+74316086 | None:intergenic |
| AAATTCTTCTATCACGGACG+TGG | 0.575727 | 7_2:+74313554 | None:intergenic |
| TGACTTGCAAACTGTGAAGC+TGG | 0.578950 | 7_2:+74314695 | None:intergenic |
| CAAAATGGGAACCATGGCAT+GGG | 0.579151 | 7_2:-74314497 | Msa1075910:CDS |
| AGTGTTAAACTCCAAGTCAA+AGG | 0.581831 | 7_2:-74314673 | Msa1075910:CDS |
| ATTGTGGAATCTTGAGACAA+TGG | 0.586611 | 7_2:+74316065 | None:intergenic |
| ATAGGTACCATTGTAGGAGG+AGG | 0.588595 | 7_2:-74316679 | Msa1075910:CDS |
| GTATTGTATTGGCAAGATTG+TGG | 0.590716 | 7_2:+74316049 | None:intergenic |
| AATCTTGCCAATACAATACA+AGG | 0.592327 | 7_2:-74316045 | Msa1075910:intron |
| ATTTCGCAAAATGGGAACCA+TGG | 0.593080 | 7_2:-74314503 | Msa1075910:CDS |
| CTAGGAAAAGGCTTGAATCG+TGG | 0.593781 | 7_2:-74316703 | Msa1075910:CDS |
| GTTCTTGCTCATGGAAGTGG+TGG | 0.597706 | 7_2:-74313496 | Msa1075910:CDS |
| AGAAAGATAATGGAGTTAGC+GGG | 0.602534 | 7_2:+74313413 | None:intergenic |
| TAGTCGAAAATATGTAGCAA+CGG | 0.603349 | 7_2:+74316296 | None:intergenic |
| TCACCAACTTGATCAAAGAG+AGG | 0.607413 | 7_2:+74316939 | None:intergenic |
| CAATAGGGTCAAGGATTGTG+TGG | 0.610105 | 7_2:-74313686 | Msa1075910:CDS |
| TAGATATGATTATGGAGTGG+TGG | 0.612279 | 7_2:-74316256 | Msa1075910:CDS |
| GGAATCCTCCAAAATAGTCA+AGG | 0.612514 | 7_2:-74314733 | Msa1075910:CDS |
| GGAATAGGTACCATTGTAGG+AGG | 0.619011 | 7_2:-74316682 | Msa1075910:CDS |
| ACGTCCAGGTGTGAAAGTGT+GGG | 0.632039 | 7_2:-74316193 | Msa1075910:CDS |
| AGTGCGAGGCAATAGGGTCA+AGG | 0.632227 | 7_2:-74313695 | Msa1075910:CDS |
| AGTTGGTGAAAATGCAATGT+GGG | 0.635017 | 7_2:-74316925 | Msa1075910:CDS |
| AAACTCAAATCATCTACCAC+CGG | 0.638517 | 7_2:+74313375 | None:intergenic |
| AAACAAATGAGAAAATGTGA+AGG | 0.640374 | 7_2:-74313636 | Msa1075910:CDS |
| GCTGACCTTCAATCTAGTGG+TGG | 0.645620 | 7_2:-74316226 | Msa1075910:CDS |
| AGTTCAATTAGAACAGTGCG+AGG | 0.652024 | 7_2:-74313709 | Msa1075910:CDS |
| GGAAGTGGTGGAGAAAGTAG+GGG | 0.662140 | 7_2:-74313484 | Msa1075910:CDS |
| TATATACATCATAAAACCGG+TGG | 0.672010 | 7_2:-74313391 | Msa1075910:three_prime_UTR |
| AGTTCATCACTGGCCCACAA+AGG | 0.678071 | 7_2:+74316096 | None:intergenic |
| TGAGATGACATATGACCTCG+TGG | 0.684674 | 7_2:+74313209 | None:intergenic |
| GAATAGATATGATTATGGAG+TGG | 0.688597 | 7_2:-74316259 | Msa1075910:CDS |
| AACATGTTAGGAGCTACACT+AGG | 0.705610 | 7_2:-74316721 | Msa1075910:intron |
| AAGTTGGTGAAAATGCAATG+TGG | 0.725108 | 7_2:-74316926 | Msa1075910:CDS |
| GTATATGATACAAGTCCACG+AGG | 0.787623 | 7_2:-74313224 | Msa1075910:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTACTTCTATTTATTATTA+AGG | - | chr7_2:74314960-74314979 | Msa1075910:intron | 10.0% |
| !!! | AATAAATAAAATTTGTTTAG+AGG | + | chr7_2:74315022-74315041 | None:intergenic | 10.0% |
| !!! | AATTTTGCAATTTTTTTTAA+AGG | - | chr7_2:74315687-74315706 | Msa1075910:intron | 10.0% |
| !! | AAAAAGATAGTATTTAAATT+TGG | + | chr7_2:74315984-74316003 | None:intergenic | 10.0% |
| !! | AAATATTAACTAAAATCAAA+TGG | + | chr7_2:74316240-74316259 | None:intergenic | 10.0% |
| !!! | ATATAAGAAATATTTTGTTG+TGG | - | chr7_2:74313816-74313835 | Msa1075910:intron | 15.0% |
| !!! | AAGTTGATATGTTATTAATA+AGG | - | chr7_2:74313975-74313994 | Msa1075910:intron | 15.0% |
| !!! | TCATATCTATTCTTTATTTT+TGG | + | chr7_2:74314053-74314072 | None:intergenic | 15.0% |
| !! | ATAAAGAATAGATATGATTA+TGG | - | chr7_2:74314056-74314075 | Msa1075910:intron | 15.0% |
| !!! | ATATTTTAAAATTTGAGCAT+GGG | + | chr7_2:74314577-74314596 | None:intergenic | 15.0% |
| !!! | AATATTTTAAAATTTGAGCA+TGG | + | chr7_2:74314578-74314597 | None:intergenic | 15.0% |
| !! | ATTATTATTCTATAAATGAG+TGG | - | chr7_2:74314595-74314614 | Msa1075910:intron | 15.0% |
| !! | TTCGTAAGTAATATTAATAA+GGG | + | chr7_2:74315503-74315522 | None:intergenic | 15.0% |
| !! | TTTCGTAAGTAATATTAATA+AGG | + | chr7_2:74315504-74315523 | None:intergenic | 15.0% |
| !!! | TTATAACACTTATTTTTAAC+TGG | - | chr7_2:74315712-74315731 | Msa1075910:intron | 15.0% |
| !!! | TATAACACTTATTTTTAACT+GGG | - | chr7_2:74315713-74315732 | Msa1075910:intron | 15.0% |
| !! | ATTCTATTGTACAAAATAAA+CGG | - | chr7_2:74316122-74316141 | Msa1075910:CDS | 15.0% |
| !! | TGACAAAAAAAAAAATTTGA+TGG | - | chr7_2:74316531-74316550 | Msa1075910:intron | 15.0% |
| !! | GACAAAAAAAAAAATTTGAT+GGG | - | chr7_2:74316532-74316551 | Msa1075910:intron | 15.0% |
| !!! | TTTTTTTTTTGTTAAGCTTA+CGG | - | chr7_2:74316566-74316585 | Msa1075910:intron | 15.0% |
| !!! | GTTTTTATTTTTTCCAAGAT+GGG | + | chr7_2:74313220-74313239 | None:intergenic | 20.0% |
| !!! | AGTTTTTATTTTTTCCAAGA+TGG | + | chr7_2:74313221-74313240 | None:intergenic | 20.0% |
| !! | GTATATATATGAATGATTAC+AGG | - | chr7_2:74313999-74314018 | Msa1075910:intron | 20.0% |
| !!! | TATATAGTTTATGCTTTTCT+AGG | - | chr7_2:74314337-74314356 | Msa1075910:intron | 20.0% |
| !! | AATAAAGGAATATGAAACTA+AGG | + | chr7_2:74314479-74314498 | None:intergenic | 20.0% |
| !! | AGGTAGTTATATTATATATC+AGG | + | chr7_2:74314515-74314534 | None:intergenic | 20.0% |
| !!! | GAGTCTTTGTTTAAATATTT+TGG | + | chr7_2:74314555-74314574 | None:intergenic | 20.0% |
| !! | GATTCAACAAATTACAATTA+GGG | - | chr7_2:74314622-74314641 | Msa1075910:intron | 20.0% |
| !!! | TATTTTTAGTGTAATACAGT+CGG | + | chr7_2:74314809-74314828 | None:intergenic | 20.0% |
| !!! | ATCGATTTTTTTTCTTCTTT+GGG | + | chr7_2:74314865-74314884 | None:intergenic | 20.0% |
| !!! | TATCGATTTTTTTTCTTCTT+TGG | + | chr7_2:74314866-74314885 | None:intergenic | 20.0% |
| !!! | AGTCGCTATTTTATTTTATA+TGG | + | chr7_2:74315111-74315130 | None:intergenic | 20.0% |
| !! | TCTATTAATAATATCAGACT+CGG | + | chr7_2:74315191-74315210 | None:intergenic | 20.0% |
| !! | TTGCAATTTATATGCATTAA+GGG | + | chr7_2:74315269-74315288 | None:intergenic | 20.0% |
| !! | TTTGCAATTTATATGCATTA+AGG | + | chr7_2:74315270-74315289 | None:intergenic | 20.0% |
| !! | TCGTAAGTAATATTAATAAG+GGG | + | chr7_2:74315502-74315521 | None:intergenic | 20.0% |
| !!! | ACCATGATATATATTCTTTT+GGG | + | chr7_2:74315543-74315562 | None:intergenic | 20.0% |
| !! | GGGAACAAAAAAAAATTATA+GGG | - | chr7_2:74316320-74316339 | Msa1075910:intron | 20.0% |
| !! | GGCTTATAAAAAATACATTA+TGG | - | chr7_2:74316452-74316471 | Msa1075910:intron | 20.0% |
| !! | TGATGTATATAGAAAGATAA+TGG | + | chr7_2:74316920-74316939 | None:intergenic | 20.0% |
| !! | TTCTATATACATCATAAAAC+CGG | - | chr7_2:74316926-74316945 | Msa1075910:CDS | 20.0% |
| !! | ACATATGTATCAATATAGAT+AGG | - | chr7_2:74317053-74317072 | Msa1075910:CDS | 20.0% |
| !!! | GTGTTATCTTGTAATTTTAA+AGG | - | chr7_2:74317145-74317164 | Msa1075910:CDS | 20.0% |
| !!! | TATCTTGTAATTTTAAAGGA+TGG | - | chr7_2:74317149-74317168 | Msa1075910:CDS | 20.0% |
| !!! | TTTTTATTTTCCCTTTCACT+TGG | + | chr7_2:74313087-74313106 | None:intergenic | 25.0% |
| ! | TGAAAGGGAAAATAAAAAGA+GGG | - | chr7_2:74313089-74313108 | Msa1075910:three_prime_UTR | 25.0% |
| ! | ATCAATTTGATCAACATGTT+AGG | - | chr7_2:74313587-74313606 | Msa1075910:CDS | 25.0% |
| ! | TTGCACATTTCTATATTGAT+CGG | + | chr7_2:74313893-74313912 | None:intergenic | 25.0% |
| ! | ATCTATACCTTGTATTGTAT+TGG | + | chr7_2:74314285-74314304 | None:intergenic | 25.0% |
| ! | GCAAATGAATGTTAAAAATG+TGG | - | chr7_2:74314449-74314468 | Msa1075910:CDS | 25.0% |
| ! | TTATTCTATAAATGAGTGGA+TGG | - | chr7_2:74314599-74314618 | Msa1075910:intron | 25.0% |
| ! | TATTCTATAAATGAGTGGAT+GGG | - | chr7_2:74314600-74314619 | Msa1075910:intron | 25.0% |
| ! | GGATTCAACAAATTACAATT+AGG | - | chr7_2:74314621-74314640 | Msa1075910:intron | 25.0% |
| ! | TACATTTGAATTCATGTTGA+GGG | + | chr7_2:74314662-74314681 | None:intergenic | 25.0% |
| ! | AATTCAAATGTACACATTCA+AGG | - | chr7_2:74314670-74314689 | Msa1075910:CDS | 25.0% |
| ! | CAAAAAGAACTCGAAAAATA+TGG | + | chr7_2:74314764-74314783 | None:intergenic | 25.0% |
| ! | ATGTACAACAATTAATCTGT+TGG | - | chr7_2:74314934-74314953 | Msa1075910:intron | 25.0% |
| !!! | ATGAGGTTTTTAGTTGTTAA+AGG | - | chr7_2:74315070-74315089 | Msa1075910:intron | 25.0% |
| !!! | TGAGGTTTTTAGTTGTTAAA+GGG | - | chr7_2:74315071-74315090 | Msa1075910:intron | 25.0% |
| !! | AGTTACTTTAGTCTCTAAAT+AGG | - | chr7_2:74315217-74315236 | Msa1075910:intron | 25.0% |
| ! | TTTAGTCTCTAAATAGGAAT+AGG | - | chr7_2:74315223-74315242 | Msa1075910:intron | 25.0% |
| !! | TTTTAGTCCCTAAATAGAAA+AGG | + | chr7_2:74315470-74315489 | None:intergenic | 25.0% |
| !! | GACCATGATATATATTCTTT+TGG | + | chr7_2:74315544-74315563 | None:intergenic | 25.0% |
| !! | TTGATTTTCCTTGACTATTT+TGG | + | chr7_2:74315598-74315617 | None:intergenic | 25.0% |
| !!! | AAAGAATACTTTGTTTTTCC+AGG | - | chr7_2:74315791-74315810 | Msa1075910:intron | 25.0% |
| !!! | TCTTTAAGTATTTTTGCCAT+GGG | + | chr7_2:74315866-74315885 | None:intergenic | 25.0% |
| !!! | ATCTTTAAGTATTTTTGCCA+TGG | + | chr7_2:74315867-74315886 | None:intergenic | 25.0% |
| ! | TGGCAAAAATACTTAAAGAT+TGG | - | chr7_2:74315867-74315886 | Msa1075910:intron | 25.0% |
| ! | TTTAATGTCTAAAAGTTGCA+TGG | - | chr7_2:74316276-74316295 | Msa1075910:CDS | 25.0% |
| ! | ACACATATAACTAATATCCA+CGG | - | chr7_2:74316299-74316318 | Msa1075910:CDS | 25.0% |
| !!! | ATAATTTTTTTTTGTTCCCG+TGG | + | chr7_2:74316319-74316338 | None:intergenic | 25.0% |
| ! | CGGGAACAAAAAAAAATTAT+AGG | - | chr7_2:74316319-74316338 | Msa1075910:intron | 25.0% |
| !!! | ACACGACATCTTTTTATTTT+TGG | + | chr7_2:74316430-74316449 | None:intergenic | 25.0% |
| ! | AAATAAAAAGATGTCGTGTT+TGG | - | chr7_2:74316431-74316450 | Msa1075910:intron | 25.0% |
| !!! | CTGTTCTAATTGAACTTTTT+TGG | + | chr7_2:74316607-74316626 | None:intergenic | 25.0% |
| ! | AAACAAATGAGAAAATGTGA+AGG | - | chr7_2:74316684-74316703 | Msa1075910:CDS | 25.0% |
| ! | ATTCTCAAATTCTTCTATCA+CGG | + | chr7_2:74316775-74316794 | None:intergenic | 25.0% |
| !! | TATTAACCATTCACGATTTT+GGG | - | chr7_2:74316996-74317015 | Msa1075910:CDS | 25.0% |
| ! | TTTGGGTCATAAATTAGAAA+TGG | - | chr7_2:74317013-74317032 | Msa1075910:CDS | 25.0% |
| !! | ATTTTACAATCGTCTTAAAG+GGG | + | chr7_2:74317184-74317203 | None:intergenic | 25.0% |
| !! | CATTTTACAATCGTCTTAAA+GGG | + | chr7_2:74317185-74317204 | None:intergenic | 25.0% |
| !! | TCATTTTACAATCGTCTTAA+AGG | + | chr7_2:74317186-74317205 | None:intergenic | 25.0% |
| !! | ATTGTAAAATGACCCTTTTT+AGG | - | chr7_2:74317194-74317213 | Msa1075910:CDS | 25.0% |
| !!! | GTCATTTTACATCCTAAAAA+GGG | + | chr7_2:74317209-74317228 | None:intergenic | 25.0% |
| !!! | AGTCATTTTACATCCTAAAA+AGG | + | chr7_2:74317210-74317229 | None:intergenic | 25.0% |
| GTGAAAGGGAAAATAAAAAG+AGG | - | chr7_2:74313088-74313107 | Msa1075910:three_prime_UTR | 30.0% | |
| GAAAGGGAAAATAAAAAGAG+GGG | - | chr7_2:74313090-74313109 | Msa1075910:three_prime_UTR | 30.0% | |
| AAAGGGAAAATAAAAAGAGG+GGG | - | chr7_2:74313091-74313110 | Msa1075910:three_prime_UTR | 30.0% | |
| GTTATCTTCTTCATTTGCAA+TGG | + | chr7_2:74313151-74313170 | None:intergenic | 30.0% | |
| CAATATTGCTCAAATGAAGA+AGG | - | chr7_2:74313185-74313204 | Msa1075910:three_prime_UTR | 30.0% | |
| !!! | GCTTGTTATTTTTGTCCTTT+GGG | + | chr7_2:74313269-74313288 | None:intergenic | 30.0% |
| !!! | TGCTTGTTATTTTTGTCCTT+TGG | + | chr7_2:74313270-74313289 | None:intergenic | 30.0% |
| GAATCATCTTCTTAATGTCA+TGG | + | chr7_2:74313305-74313324 | None:intergenic | 30.0% | |
| ATGATTCATAGCATCAAAGT+AGG | - | chr7_2:74313318-74313337 | Msa1075910:three_prime_UTR | 30.0% | |
| TATATATAGCAATGCCTCTT+AGG | - | chr7_2:74313539-74313558 | Msa1075910:CDS | 30.0% | |
| TTCATCATATATTGCCTAAG+AGG | + | chr7_2:74313556-74313575 | None:intergenic | 30.0% | |
| !!! | GTTGGTAACTCAATTTTCAT+TGG | - | chr7_2:74313707-74313726 | Msa1075910:CDS | 30.0% |
| ! | GGCACTTCAGTTTATATTTT+TGG | - | chr7_2:74313728-74313747 | Msa1075910:CDS | 30.0% |
| TAGTCGAAAATATGTAGCAA+CGG | + | chr7_2:74314027-74314046 | None:intergenic | 30.0% | |
| GAATAGATATGATTATGGAG+TGG | - | chr7_2:74314061-74314080 | Msa1075910:intron | 30.0% | |
| ACGTTTATTGAACATCCTAA+TGG | - | chr7_2:74314163-74314182 | Msa1075910:intron | 30.0% | |
| CGTTTATTGAACATCCTAAT+GGG | - | chr7_2:74314164-74314183 | Msa1075910:intron | 30.0% | |
| AATCTTGCCAATACAATACA+AGG | - | chr7_2:74314275-74314294 | Msa1075910:intron | 30.0% | |
| TATTCTCATGACCAAATATG+TGG | - | chr7_2:74314390-74314409 | Msa1075910:CDS | 30.0% | |
| ! | ATAGTTGTCTATGTCTCTTT+TGG | + | chr7_2:74314428-74314447 | None:intergenic | 30.0% |
| GGTGAATTACAACACAATAA+AGG | + | chr7_2:74314494-74314513 | None:intergenic | 30.0% | |
| !!! | CTACCTAACTTTTTTTATGC+TGG | - | chr7_2:74314529-74314548 | Msa1075910:intron | 30.0% |
| GTACATTTGAATTCATGTTG+AGG | + | chr7_2:74314663-74314682 | None:intergenic | 30.0% | |
| TACACATTCAAGGAAAGAAA+AGG | - | chr7_2:74314680-74314699 | Msa1075910:CDS | 30.0% | |
| AAGAACTCGAAAAATATGGA+GGG | + | chr7_2:74314760-74314779 | None:intergenic | 30.0% | |
| AAAGAACTCGAAAAATATGG+AGG | + | chr7_2:74314761-74314780 | None:intergenic | 30.0% | |
| TCTCTAAATAGGAATAGGAA+AGG | - | chr7_2:74315228-74315247 | Msa1075910:intron | 30.0% | |
| TTAGGGACTAAATTGACTAA+CGG | + | chr7_2:74315313-74315332 | None:intergenic | 30.0% | |
| ! | AACTCTGTTGGTCAATTTTA+GGG | + | chr7_2:74315394-74315413 | None:intergenic | 30.0% |
| ! | AAACTCTGTTGGTCAATTTT+AGG | + | chr7_2:74315395-74315414 | None:intergenic | 30.0% |
| GCCCAAAAGAATATATATCA+TGG | - | chr7_2:74315539-74315558 | Msa1075910:intron | 30.0% | |
| ! | ATCATGGTCTTTTATTGTGT+AGG | - | chr7_2:74315555-74315574 | Msa1075910:intron | 30.0% |
| !! | ATTTTCCTTGACTATTTTGG+AGG | + | chr7_2:74315595-74315614 | None:intergenic | 30.0% |
| !!! | ATAAACAGCTACCTTTTTTG+AGG | + | chr7_2:74315949-74315968 | None:intergenic | 30.0% |
| CACATATAACTAATATCCAC+GGG | - | chr7_2:74316300-74316319 | Msa1075910:CDS | 30.0% | |
| !!! | CATCTTTTTATTTTTGGTCG+TGG | + | chr7_2:74316424-74316443 | None:intergenic | 30.0% |
| GCATGATCTAGAAAATGATA+TGG | - | chr7_2:74316500-74316519 | Msa1075910:intron | 30.0% | |
| AAATGAGAAAATGTGAAGGA+AGG | - | chr7_2:74316688-74316707 | Msa1075910:CDS | 30.0% | |
| AATGAGAAAATGTGAAGGAA+GGG | - | chr7_2:74316689-74316708 | Msa1075910:CDS | 30.0% | |
| GTGATAGAAGAATTTGAGAA+TGG | - | chr7_2:74316774-74316793 | Msa1075910:intron | 30.0% | |
| !! | TAGAAAGATAATGGAGTTAG+CGG | + | chr7_2:74316911-74316930 | None:intergenic | 30.0% |
| TATATACATCATAAAACCGG+TGG | - | chr7_2:74316929-74316948 | Msa1075910:CDS | 30.0% | |
| ! | GTATTAACCATTCACGATTT+TGG | - | chr7_2:74316995-74317014 | Msa1075910:CDS | 30.0% |
| AAGGATACAAATACCCATCT+TGG | - | chr7_2:74313204-74313223 | Msa1075910:three_prime_UTR | 35.0% | |
| GTTGGAAGTAATTGGAACAA+TGG | + | chr7_2:74313247-74313266 | None:intergenic | 35.0% | |
| !!! | GTTATTTTTGTCCTTTGGGT+TGG | + | chr7_2:74313265-74313284 | None:intergenic | 35.0% |
| AATCCTCTCTTTGATCAAGT+TGG | - | chr7_2:74313378-74313397 | Msa1075910:three_prime_UTR | 35.0% | |
| !! | AAGTTGGTGAAAATGCAATG+TGG | - | chr7_2:74313394-74313413 | Msa1075910:three_prime_UTR | 35.0% |
| !! | AGTTGGTGAAAATGCAATGT+GGG | - | chr7_2:74313395-74313414 | Msa1075910:three_prime_UTR | 35.0% |
| ! | GCAATTTTTGCACAAACCAT+TGG | - | chr7_2:74313680-74313699 | Msa1075910:CDS | 35.0% |
| ! | ATTTTTGCACAAACCATTGG+AGG | - | chr7_2:74313683-74313702 | Msa1075910:CDS | 35.0% |
| ! | ATTGATCGGTGCAATTTTTG+TGG | + | chr7_2:74313879-74313898 | None:intergenic | 35.0% |
| TAGATATGATTATGGAGTGG+TGG | - | chr7_2:74314064-74314083 | Msa1075910:intron | 35.0% | |
| TTGCGATAATGAAACCCATT+AGG | + | chr7_2:74314181-74314200 | None:intergenic | 35.0% | |
| ATTTGTTCGTCTTTCCTTTG+TGG | - | chr7_2:74314210-74314229 | Msa1075910:intron | 35.0% | |
| TTTGTTCGTCTTTCCTTTGT+GGG | - | chr7_2:74314211-74314230 | Msa1075910:intron | 35.0% | |
| ATTGTGGAATCTTGAGACAA+TGG | + | chr7_2:74314258-74314277 | None:intergenic | 35.0% | |
| ! | GTATTGTATTGGCAAGATTG+TGG | + | chr7_2:74314274-74314293 | None:intergenic | 35.0% |
| !! | TGTCTCTTTTGGTTGATCTA+GGG | + | chr7_2:74314417-74314436 | None:intergenic | 35.0% |
| !! | ATGTCTCTTTTGGTTGATCT+AGG | + | chr7_2:74314418-74314437 | None:intergenic | 35.0% |
| TGGCCAGCATAAAAAAAGTT+AGG | + | chr7_2:74314535-74314554 | None:intergenic | 35.0% | |
| !!! | AAAAGGACTTATTTTGTGCG+TGG | - | chr7_2:74314697-74314716 | Msa1075910:CDS | 35.0% |
| !!! | AAAGGACTTATTTTGTGCGT+GGG | - | chr7_2:74314698-74314717 | Msa1075910:CDS | 35.0% |
| AGAACTCGAAAAATATGGAG+GGG | + | chr7_2:74314759-74314778 | None:intergenic | 35.0% | |
| ACTAACAGAGTCTACATTCA+GGG | + | chr7_2:74315298-74315317 | None:intergenic | 35.0% | |
| ACTAACGGAGTCTACATTTA+GGG | + | chr7_2:74315362-74315381 | None:intergenic | 35.0% | |
| TTAGGGACTAAAGTGACTAA+CGG | + | chr7_2:74315377-74315396 | None:intergenic | 35.0% | |
| TGACCAACAGAGTTTACATT+CGG | - | chr7_2:74315400-74315419 | Msa1075910:intron | 35.0% | |
| TTTGCAATTTCTCTGCATTC+AGG | - | chr7_2:74315428-74315447 | Msa1075910:intron | 35.0% | |
| TTGCAATTTCTCTGCATTCA+GGG | - | chr7_2:74315429-74315448 | Msa1075910:intron | 35.0% | |
| ! | TGACCACTCCTTTTCTATTT+AGG | - | chr7_2:74315459-74315478 | Msa1075910:intron | 35.0% |
| ! | GACCACTCCTTTTCTATTTA+GGG | - | chr7_2:74315460-74315479 | Msa1075910:intron | 35.0% |
| ! | CTTTTATTGTGTAGGTTGCT+TGG | - | chr7_2:74315563-74315582 | Msa1075910:intron | 35.0% |
| AGTGTTAAACTCCAAGTCAA+AGG | - | chr7_2:74315647-74315666 | Msa1075910:intron | 35.0% | |
| CAATGATTCATCCTTTGACT+TGG | + | chr7_2:74315661-74315680 | None:intergenic | 35.0% | |
| CAAGTCAAAGGATGAATCAT+TGG | - | chr7_2:74315659-74315678 | Msa1075910:intron | 35.0% | |
| ! | AATTTGGATTTTCCTACCCA+TGG | - | chr7_2:74315847-74315866 | Msa1075910:intron | 35.0% |
| !! | TAAGTATTTTTGCCATGGGT+AGG | + | chr7_2:74315862-74315881 | None:intergenic | 35.0% |
| AACAAGAGAAGAGTTGAGTT+TGG | - | chr7_2:74316737-74316756 | Msa1075910:intron | 35.0% | |
| !! | AGAAAGATAATGGAGTTAGC+GGG | + | chr7_2:74316910-74316929 | None:intergenic | 35.0% |
| AAACTCAAATCATCTACCAC+CGG | + | chr7_2:74316948-74316967 | None:intergenic | 35.0% | |
| TTATGACCCAAAATCGTGAA+TGG | + | chr7_2:74317005-74317024 | None:intergenic | 35.0% | |
| TCCAATTACTTCCAACCCAA+AGG | - | chr7_2:74313251-74313270 | Msa1075910:three_prime_UTR | 40.0% | |
| !! | TCCTTTGGGTTGGAAGTAAT+TGG | + | chr7_2:74313255-74313274 | None:intergenic | 40.0% |
| AGTAGGAATCTCACTTGTGT+TGG | - | chr7_2:74313335-74313354 | Msa1075910:three_prime_UTR | 40.0% | |
| TCACCAACTTGATCAAAGAG+AGG | + | chr7_2:74313384-74313403 | None:intergenic | 40.0% | |
| GTCATCTCTGAATTCAATGC+AGG | - | chr7_2:74313435-74313454 | Msa1075910:CDS | 40.0% | |
| AACATGTTAGGAGCTACACT+AGG | - | chr7_2:74313599-74313618 | Msa1075910:CDS | 40.0% | |
| TTAGGAGCTACACTAGGAAA+AGG | - | chr7_2:74313605-74313624 | Msa1075910:CDS | 40.0% | |
| AAAGGCTTGAATCGTGGAAT+AGG | - | chr7_2:74313623-74313642 | Msa1075910:CDS | 40.0% | |
| TATGCTGACCTTCAATCTAG+TGG | - | chr7_2:74314091-74314110 | Msa1075910:intron | 40.0% | |
| AGATACCACCACTAGATTGA+AGG | + | chr7_2:74314102-74314121 | None:intergenic | 40.0% | |
| TTCAATCTAGTGGTGGTATC+TGG | - | chr7_2:74314101-74314120 | Msa1075910:intron | 40.0% | |
| TCAATCTAGTGGTGGTATCT+GGG | - | chr7_2:74314102-74314121 | Msa1075910:intron | 40.0% | |
| GGAATCATGAAGTTCATCAC+TGG | + | chr7_2:74314237-74314256 | None:intergenic | 40.0% | |
| TGATCTAGGGACCACATATT+TGG | + | chr7_2:74314404-74314423 | None:intergenic | 40.0% | |
| !!! | AAGGACTTATTTTGTGCGTG+GGG | - | chr7_2:74314699-74314718 | Msa1075910:CDS | 40.0% |
| GACTAACAGAGTCTACATTC+AGG | + | chr7_2:74315299-74315318 | None:intergenic | 40.0% | |
| ACTAACGGAGTCTGCATTTA+GGG | + | chr7_2:74315330-74315349 | None:intergenic | 40.0% | |
| GACTAACGGAGTCTACATTT+AGG | + | chr7_2:74315363-74315382 | None:intergenic | 40.0% | |
| AGTCCGAATGTAAACTCTGT+TGG | + | chr7_2:74315406-74315425 | None:intergenic | 40.0% | |
| GTCCCTAAATAGAAAAGGAG+TGG | + | chr7_2:74315465-74315484 | None:intergenic | 40.0% | |
| TTATTGTGTAGGTTGCTTGG+AGG | - | chr7_2:74315566-74315585 | Msa1075910:intron | 40.0% | |
| GGAATCCTCCAAAATAGTCA+AGG | - | chr7_2:74315587-74315606 | Msa1075910:intron | 40.0% | |
| TCCAGGCAAATTTCGCAAAA+TGG | - | chr7_2:74315808-74315827 | Msa1075910:intron | 40.0% | |
| CCAGGCAAATTTCGCAAAAT+GGG | - | chr7_2:74315809-74315828 | Msa1075910:intron | 40.0% | |
| ATTTCGCAAAATGGGAACCA+TGG | - | chr7_2:74315817-74315836 | Msa1075910:intron | 40.0% | |
| AATCCAAATTTCCCATGCCA+TGG | + | chr7_2:74315837-74315856 | None:intergenic | 40.0% | |
| TTGCTTCCAAGCCTCAAAAA+AGG | - | chr7_2:74315935-74315954 | Msa1075910:intron | 40.0% | |
| ! | ACGATGTCTCAATCTAAGGT+AGG | + | chr7_2:74316078-74316097 | None:intergenic | 40.0% |
| GATGACGATGTCTCAATCTA+AGG | + | chr7_2:74316082-74316101 | None:intergenic | 40.0% | |
| AGTTCAATTAGAACAGTGCG+AGG | - | chr7_2:74316611-74316630 | Msa1075910:CDS | 40.0% | |
| AAATTCTTCTATCACGGACG+TGG | + | chr7_2:74316769-74316788 | None:intergenic | 40.0% | |
| AATGCTACCAATTGCAAGCT+TGG | - | chr7_2:74316800-74316819 | Msa1075910:intron | 40.0% | |
| AAGAACACCAAGCTTGCAAT+TGG | + | chr7_2:74316810-74316829 | None:intergenic | 40.0% | |
| AGTAGGGGAATTGGTTATAG+AGG | - | chr7_2:74316851-74316870 | Msa1075910:intron | 40.0% | |
| GGTTGGAGAACTTCAAGATA+TGG | - | chr7_2:74316872-74316891 | Msa1075910:intron | 40.0% | |
| GTATATGATACAAGTCCACG+AGG | - | chr7_2:74317096-74317115 | Msa1075910:CDS | 40.0% | |
| GAGGGGGAGTAAAGACAAAA+TGG | - | chr7_2:74313107-74313126 | Msa1075910:three_prime_UTR | 45.0% | |
| CTAGGAAAAGGCTTGAATCG+TGG | - | chr7_2:74313617-74313636 | Msa1075910:CDS | 45.0% | |
| CGTGGAATAGGTACCATTGT+AGG | - | chr7_2:74313635-74313654 | Msa1075910:CDS | 45.0% | |
| GGAATAGGTACCATTGTAGG+AGG | - | chr7_2:74313638-74313657 | Msa1075910:CDS | 45.0% | |
| ATAGGTACCATTGTAGGAGG+AGG | - | chr7_2:74313641-74313660 | Msa1075910:CDS | 45.0% | |
| TACCATTGTAGGAGGAGGAT+TGG | - | chr7_2:74313646-74313665 | Msa1075910:CDS | 45.0% | |
| ACCATTGTAGGAGGAGGATT+GGG | - | chr7_2:74313647-74313666 | Msa1075910:CDS | 45.0% | |
| TGAGTTACCAACTCCTCCAA+TGG | + | chr7_2:74313699-74313718 | None:intergenic | 45.0% | |
| CAATCTAGTGGTGGTATCTG+GGG | - | chr7_2:74314103-74314122 | Msa1075910:intron | 45.0% | |
| AATTCCCACACTTTCACACC+TGG | + | chr7_2:74314134-74314153 | None:intergenic | 45.0% | |
| !!! | AGGACTTATTTTGTGCGTGG+GGG | - | chr7_2:74314700-74314719 | Msa1075910:CDS | 45.0% |
| AAAGCCCTTCATGCATAGAG+TGG | - | chr7_2:74315140-74315159 | Msa1075910:intron | 45.0% | |
| AAGCCCTTCATGCATAGAGT+GGG | - | chr7_2:74315141-74315160 | Msa1075910:intron | 45.0% | |
| GACTAACGGAGTCTGCATTT+AGG | + | chr7_2:74315331-74315350 | None:intergenic | 45.0% | |
| CAAACTGTGAAGCTGGTATC+TGG | + | chr7_2:74315621-74315640 | None:intergenic | 45.0% | |
| ! | TGACTTGCAAACTGTGAAGC+TGG | + | chr7_2:74315628-74315647 | None:intergenic | 45.0% |
| ! | CCCATTTTGCGAAATTTGCC+TGG | + | chr7_2:74315812-74315831 | None:intergenic | 45.0% |
| CAAAATGGGAACCATGGCAT+GGG | - | chr7_2:74315823-74315842 | Msa1075910:intron | 45.0% | |
| GAACCATGGCATGGGAAATT+TGG | - | chr7_2:74315831-74315850 | Msa1075910:intron | 45.0% | |
| AGCTGCACTCATTCTTGCAT+TGG | - | chr7_2:74315908-74315927 | Msa1075910:intron | 45.0% | |
| !!! | CAGCTACCTTTTTTGAGGCT+TGG | + | chr7_2:74315944-74315963 | None:intergenic | 45.0% |
| TTAGAACAGTGCGAGGCAAT+AGG | - | chr7_2:74316618-74316637 | Msa1075910:CDS | 45.0% | |
| TAGAACAGTGCGAGGCAATA+GGG | - | chr7_2:74316619-74316638 | Msa1075910:CDS | 45.0% | |
| CAATAGGGTCAAGGATTGTG+TGG | - | chr7_2:74316634-74316653 | Msa1075910:CDS | 45.0% | |
| !! | AAGCTTGGTGTTCTTGCTCA+TGG | - | chr7_2:74316815-74316834 | Msa1075910:intron | 45.0% |
| ! | ATGGAAGTGGTGGAGAAAGT+AGG | - | chr7_2:74316834-74316853 | Msa1075910:intron | 45.0% |
| ! | TGGAAGTGGTGGAGAAAGTA+GGG | - | chr7_2:74316835-74316854 | Msa1075910:intron | 45.0% |
| GGGGAATTGGTTATAGAGGT+TGG | - | chr7_2:74316855-74316874 | Msa1075910:intron | 45.0% | |
| GGAGAACTTCAAGATATGGC+TGG | - | chr7_2:74316876-74316895 | Msa1075910:intron | 45.0% | |
| TGAGATGACATATGACCTCG+TGG | + | chr7_2:74317114-74317133 | None:intergenic | 45.0% | |
| !! | TTTATGTATAAATTATTATA+AGG | - | chr7_2:74313935-74313954 | Msa1075910:intron | 5.0% |
| !!! | TTTTTTATTTAAAAAAAATG+AGG | - | chr7_2:74315053-74315072 | Msa1075910:intron | 5.0% |
| TCCCAATCCTCCTCCTACAA+TGG | + | chr7_2:74313651-74313670 | None:intergenic | 50.0% | |
| GCACAAACCATTGGAGGAGT+TGG | - | chr7_2:74313689-74313708 | Msa1075910:CDS | 50.0% | |
| GCTGACCTTCAATCTAGTGG+TGG | - | chr7_2:74314094-74314113 | Msa1075910:intron | 50.0% | |
| ! | ACGTCCAGGTGTGAAAGTGT+GGG | - | chr7_2:74314127-74314146 | Msa1075910:intron | 50.0% |
| AGTTCATCACTGGCCCACAA+AGG | + | chr7_2:74314227-74314246 | None:intergenic | 50.0% | |
| !!! | GGACTTATTTTGTGCGTGGG+GGG | - | chr7_2:74314701-74314720 | Msa1075910:CDS | 50.0% |
| CTCGAAAAATATGGAGGGGC+TGG | + | chr7_2:74314755-74314774 | None:intergenic | 50.0% | |
| CTGCCCACTCTATGCATGAA+GGG | + | chr7_2:74315147-74315166 | None:intergenic | 50.0% | |
| TCTGCCCACTCTATGCATGA+AGG | + | chr7_2:74315148-74315167 | None:intergenic | 50.0% | |
| GCAAAATGGGAACCATGGCA+TGG | - | chr7_2:74315822-74315841 | Msa1075910:intron | 50.0% | |
| GTGTGGACTCTACGAGAAGT+TGG | - | chr7_2:74316651-74316670 | Msa1075910:CDS | 50.0% | |
| GGTGTTCTTGCTCATGGAAG+TGG | - | chr7_2:74316821-74316840 | Msa1075910:intron | 50.0% | |
| GTTCTTGCTCATGGAAGTGG+TGG | - | chr7_2:74316824-74316843 | Msa1075910:intron | 50.0% | |
| ! | GGAAGTGGTGGAGAAAGTAG+GGG | - | chr7_2:74316836-74316855 | Msa1075910:intron | 50.0% |
| GGTGGAGAAAGTAGGGGAAT+TGG | - | chr7_2:74316842-74316861 | Msa1075910:intron | 50.0% | |
| AGGAGGAGGATTGGGATGCT+TGG | - | chr7_2:74313655-74313674 | Msa1075910:CDS | 55.0% | |
| CACGTCCAGGTGTGAAAGTG+TGG | - | chr7_2:74314126-74314145 | Msa1075910:intron | 55.0% | |
| AGCCACCTACAAGGCTGCAT+GGG | - | chr7_2:74314727-74314746 | Msa1075910:CDS | 55.0% | |
| AGTGCGAGGCAATAGGGTCA+AGG | - | chr7_2:74316625-74316644 | Msa1075910:CDS | 55.0% | |
| GAGCCACCTACAAGGCTGCA+TGG | - | chr7_2:74314726-74314745 | Msa1075910:CDS | 60.0% | |
| ! | AGCCCATGCAGCCTTGTAGG+TGG | + | chr7_2:74314732-74314751 | None:intergenic | 60.0% |
| ! | TGGAGCCCATGCAGCCTTGT+AGG | + | chr7_2:74314735-74314754 | None:intergenic | 60.0% |
| ! | GTGGTATCTGGGGCACGTCC+AGG | - | chr7_2:74314113-74314132 | Msa1075910:intron | 65.0% |
| GGGGGGCAGAGCCACCTACA+AGG | - | chr7_2:74314718-74314737 | Msa1075910:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 74313082 | 74317260 | 74313082 | ID=Msa1075910;Name=Msa1075910 |
| chr7_2 | mRNA | 74313082 | 74317260 | 74313082 | ID=Msa1075910-mRNA-1;Parent=Msa1075910;Name=Msa1075910-mRNA-1;_AED=0.04;_eAED=0.04;_QI=44|1|1|1|1|1|6|346|442 |
| chr7_2 | exon | 74313082 | 74313760 | 74313082 | ID=Msa1075910-mRNA-1:exon:17480;Parent=Msa1075910-mRNA-1 |
| chr7_2 | exon | 74314386 | 74314529 | 74314386 | ID=Msa1075910-mRNA-1:exon:17479;Parent=Msa1075910-mRNA-1 |
| chr7_2 | exon | 74314662 | 74314765 | 74314662 | ID=Msa1075910-mRNA-1:exon:17478;Parent=Msa1075910-mRNA-1 |
| chr7_2 | exon | 74316046 | 74316321 | 74316046 | ID=Msa1075910-mRNA-1:exon:17477;Parent=Msa1075910-mRNA-1 |
| chr7_2 | exon | 74316593 | 74316733 | 74316593 | ID=Msa1075910-mRNA-1:exon:17476;Parent=Msa1075910-mRNA-1 |
| chr7_2 | exon | 74316886 | 74317260 | 74316886 | ID=Msa1075910-mRNA-1:exon:17475;Parent=Msa1075910-mRNA-1 |
| chr7_2 | five_prime_UTR | 74317217 | 74317260 | 74317217 | ID=Msa1075910-mRNA-1:five_prime_utr;Parent=Msa1075910-mRNA-1 |
| chr7_2 | CDS | 74316886 | 74317216 | 74316886 | ID=Msa1075910-mRNA-1:cds;Parent=Msa1075910-mRNA-1 |
| chr7_2 | CDS | 74316593 | 74316733 | 74316593 | ID=Msa1075910-mRNA-1:cds;Parent=Msa1075910-mRNA-1 |
| chr7_2 | CDS | 74316046 | 74316321 | 74316046 | ID=Msa1075910-mRNA-1:cds;Parent=Msa1075910-mRNA-1 |
| chr7_2 | CDS | 74314662 | 74314765 | 74314662 | ID=Msa1075910-mRNA-1:cds;Parent=Msa1075910-mRNA-1 |
| chr7_2 | CDS | 74314386 | 74314529 | 74314386 | ID=Msa1075910-mRNA-1:cds;Parent=Msa1075910-mRNA-1 |
| chr7_2 | CDS | 74313428 | 74313760 | 74313428 | ID=Msa1075910-mRNA-1:cds;Parent=Msa1075910-mRNA-1 |
| chr7_2 | three_prime_UTR | 74313082 | 74313427 | 74313082 | ID=Msa1075910-mRNA-1:three_prime_utr;Parent=Msa1075910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
