Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1017750 | XP_013449716.1 | 96.606 | 442 | 15 | 0 | 1 | 442 | 1 | 442 | 0.0 | 880 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1017750 | sp|Q9SJE8|ALMT2_ARATH | 36.842 | 380 | 227 | 5 | 61 | 431 | 18 | 393 | 1.33e-81 | 263 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1017750 | A0A072U214 | 96.606 | 442 | 15 | 0 | 1 | 442 | 1 | 442 | 0.0 | 880 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024550 | Msa1017750 | 0.805590 | 1.240116e-49 | -8.615850e-47 |
| Msa0120400 | Msa1017750 | 0.806846 | 6.747205e-50 | -8.615850e-47 |
| Msa0664600 | Msa1017750 | 0.800022 | 1.751115e-48 | -8.615850e-47 |
| Msa0795870 | Msa1017750 | 0.802009 | 6.874396e-49 | -8.615850e-47 |
| Msa0224780 | Msa1017750 | 0.800915 | 1.152026e-48 | -8.615850e-47 |
| Msa0225100 | Msa1017750 | 0.814822 | 1.266422e-51 | -8.615850e-47 |
| Msa0425170 | Msa1017750 | 0.800395 | 1.470772e-48 | -8.615850e-47 |
| Msa0471670 | Msa1017750 | 0.816996 | 4.145748e-52 | -8.615850e-47 |
| Msa0980200 | Msa1017750 | 0.804627 | 1.972737e-49 | -8.615850e-47 |
| Msa1004840 | Msa1017750 | 0.800741 | 1.250055e-48 | -8.615850e-47 |
| Msa1017750 | Msa1075910 | 0.863626 | 2.177338e-64 | -8.615850e-47 |
| Msa1017750 | Msa1101090 | 0.800997 | 1.108255e-48 | -8.615850e-47 |
| Msa1017750 | Msa1117080 | 0.872845 | 2.325743e-67 | -8.615850e-47 |
| Msa1017750 | Msa1117220 | 0.897140 | 1.876364e-76 | -8.615850e-47 |
| Msa1017750 | Msa1132840 | 0.806840 | 6.767043e-50 | -8.615850e-47 |
| Msa1017750 | Msa1144450 | 0.816930 | 4.290383e-52 | -8.615850e-47 |
| Msa0266180 | Msa1017750 | 0.807773 | 4.291136e-50 | -8.615850e-47 |
| Msa0287740 | Msa1017750 | 0.824469 | 7.938926e-54 | -8.615850e-47 |
| Msa0556430 | Msa1017750 | 0.805590 | 1.240383e-49 | -8.615850e-47 |
| Msa0580370 | Msa1017750 | 0.806487 | 8.033137e-50 | -8.615850e-47 |
| Msa0967380 | Msa1017750 | 0.811651 | 6.291761e-51 | -8.615850e-47 |
| Msa0967870 | Msa1017750 | 0.813988 | 1.936666e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1017750 | MtrunA17_Chr7g0259731 | 96.606 | 442 | 15 | 0 | 1 | 442 | 1 | 442 | 0.0 | 880 |
| Msa1017750 | MtrunA17_Chr4g0025591 | 37.179 | 390 | 237 | 4 | 53 | 439 | 39 | 423 | 5.90e-83 | 263 |
| Msa1017750 | MtrunA17_Chr1g0212251 | 41.139 | 316 | 177 | 4 | 61 | 371 | 42 | 353 | 6.95e-83 | 264 |
| Msa1017750 | MtrunA17_Chr7g0267471 | 39.394 | 396 | 233 | 6 | 47 | 441 | 35 | 424 | 4.35e-81 | 258 |
| Msa1017750 | MtrunA17_Chr1g0188871 | 36.224 | 392 | 235 | 4 | 60 | 440 | 50 | 437 | 8.34e-81 | 257 |
| Msa1017750 | MtrunA17_Chr2g0321971 | 36.693 | 387 | 235 | 5 | 61 | 442 | 42 | 423 | 2.73e-78 | 250 |
| Msa1017750 | MtrunA17_Chr1g0188881 | 35.661 | 401 | 231 | 6 | 60 | 440 | 56 | 449 | 1.93e-77 | 249 |
| Msa1017750 | MtrunA17_Chr1g0212201 | 39.490 | 314 | 180 | 4 | 61 | 368 | 46 | 355 | 7.51e-77 | 249 |
| Msa1017750 | MtrunA17_Chr4g0054741 | 41.066 | 319 | 176 | 4 | 61 | 372 | 54 | 367 | 1.61e-72 | 237 |
| Msa1017750 | MtrunA17_Chr2g0321961 | 36.317 | 391 | 237 | 6 | 54 | 439 | 36 | 419 | 2.82e-72 | 234 |
| Msa1017750 | MtrunA17_Chr1g0212291 | 39.117 | 317 | 183 | 4 | 61 | 371 | 43 | 355 | 8.77e-70 | 230 |
| Msa1017750 | MtrunA17_Chr8g0390931 | 33.134 | 335 | 215 | 7 | 61 | 393 | 64 | 391 | 1.62e-56 | 196 |
| Msa1017750 | MtrunA17_Chr1g0210101 | 32.622 | 328 | 202 | 8 | 61 | 376 | 118 | 438 | 1.24e-55 | 194 |
| Msa1017750 | MtrunA17_Chr6g0484691 | 34.503 | 342 | 205 | 9 | 61 | 389 | 89 | 424 | 1.72e-54 | 191 |
| Msa1017750 | MtrunA17_Chr8g0390921 | 33.140 | 344 | 202 | 10 | 61 | 387 | 65 | 397 | 1.15e-48 | 174 |
| Msa1017750 | MtrunA17_Chr8g0390901 | 31.650 | 297 | 175 | 10 | 110 | 389 | 9 | 294 | 8.10e-41 | 151 |
| Msa1017750 | MtrunA17_Chr5g0400471 | 30.612 | 294 | 167 | 5 | 112 | 372 | 3 | 292 | 5.72e-40 | 149 |
| Msa1017750 | MtrunA17_Chr4g0054771 | 34.685 | 222 | 133 | 4 | 158 | 372 | 3 | 219 | 1.44e-37 | 140 |
| Msa1017750 | MtrunA17_Chr4g0054761 | 53.061 | 98 | 46 | 0 | 61 | 158 | 54 | 151 | 6.18e-15 | 72.4 |
| Msa1017750 | MtrunA17_Chr5g0400481 | 53.704 | 54 | 25 | 0 | 61 | 114 | 62 | 115 | 1.38e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1017750 | AT1G08440.1 | 36.842 | 380 | 227 | 5 | 61 | 431 | 18 | 393 | 1.35e-82 | 263 |
| Msa1017750 | AT2G27240.2 | 35.369 | 393 | 234 | 4 | 61 | 442 | 18 | 401 | 1.63e-82 | 262 |
| Msa1017750 | AT4G17970.1 | 41.587 | 315 | 177 | 3 | 61 | 372 | 44 | 354 | 3.62e-82 | 263 |
| Msa1017750 | AT5G46600.1 | 41.433 | 321 | 175 | 4 | 61 | 372 | 47 | 363 | 7.70e-82 | 262 |
| Msa1017750 | AT5G46610.1 | 38.416 | 341 | 199 | 4 | 61 | 395 | 46 | 381 | 5.84e-81 | 260 |
| Msa1017750 | AT4G00910.1 | 38.443 | 411 | 213 | 7 | 61 | 439 | 63 | 465 | 8.47e-80 | 255 |
| Msa1017750 | AT2G27240.1 | 34.129 | 419 | 230 | 6 | 61 | 442 | 18 | 427 | 1.12e-78 | 253 |
| Msa1017750 | AT1G08430.1 | 34.097 | 393 | 242 | 5 | 61 | 442 | 18 | 404 | 3.94e-76 | 246 |
| Msa1017750 | AT3G11680.1 | 37.037 | 405 | 239 | 8 | 46 | 440 | 21 | 419 | 2.61e-73 | 238 |
| Msa1017750 | AT3G11680.2 | 37.037 | 405 | 239 | 8 | 46 | 440 | 23 | 421 | 2.96e-73 | 238 |
| Msa1017750 | AT5G46610.2 | 34.311 | 341 | 189 | 5 | 61 | 395 | 46 | 357 | 4.96e-65 | 218 |
| Msa1017750 | AT1G18420.2 | 33.041 | 342 | 210 | 8 | 61 | 389 | 5 | 340 | 2.46e-58 | 199 |
| Msa1017750 | AT3G18440.1 | 34.675 | 323 | 193 | 8 | 61 | 371 | 84 | 400 | 4.71e-58 | 201 |
| Msa1017750 | AT1G18420.1 | 33.041 | 342 | 210 | 8 | 61 | 389 | 88 | 423 | 1.28e-57 | 199 |
| Msa1017750 | AT5G46610.3 | 33.333 | 318 | 155 | 4 | 61 | 372 | 46 | 312 | 6.52e-57 | 196 |
| Msa1017750 | AT2G17470.1 | 31.073 | 354 | 211 | 10 | 61 | 395 | 36 | 375 | 3.77e-53 | 186 |
| Msa1017750 | AT2G17470.2 | 31.073 | 354 | 211 | 10 | 61 | 395 | 58 | 397 | 4.34e-53 | 187 |
| Msa1017750 | AT1G25480.1 | 33.621 | 348 | 210 | 11 | 61 | 395 | 64 | 403 | 1.44e-51 | 182 |
| Msa1017750 | AT1G68600.1 | 32.615 | 325 | 197 | 9 | 61 | 371 | 53 | 369 | 1.27e-48 | 174 |
Find 106 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATTAACCATTCACGATTT+TGG | 0.113499 | 7_1:+37089137 | Msa1017750:three_prime_UTR |
| TCCAGGCAAATTTCGCAAAA+TGG | 0.164609 | 7_1:+37087950 | Msa1017750:intron |
| TCCTTTGGGTTGGAAGTAAT+TGG | 0.187671 | 7_1:-37085397 | None:intergenic |
| GAACCATGGCATGGGAAATT+TGG | 0.190375 | 7_1:+37087973 | Msa1017750:CDS |
| TTCAATCTAGTAGTGGTATC+TGG | 0.230829 | 7_1:+37086226 | Msa1017750:CDS |
| ATCTATACCTTGTATTGTAT+TGG | 0.310244 | 7_1:-37086407 | None:intergenic |
| ACGTTTATTGAACATCCTAA+TGG | 0.327416 | 7_1:+37086288 | Msa1017750:CDS |
| ATAAAGAATAGATATGATTA+TGG | 0.344730 | 7_1:+37086181 | Msa1017750:CDS |
| GGGGAATTGGTTATAGAGGT+TGG | 0.364522 | 7_1:+37088997 | Msa1017750:CDS |
| CAAACTGTGAAGCTGGTATC+TGG | 0.367847 | 7_1:-37087757 | None:intergenic |
| AGTAGGGGAATTGGTTATAG+AGG | 0.375086 | 7_1:+37088993 | Msa1017750:CDS |
| CCAGGCAAATTTCGCAAAAT+GGG | 0.378357 | 7_1:+37087951 | Msa1017750:intron |
| TTTGTTCGTCTTTCCTTTGT+GGG | 0.382042 | 7_1:+37086336 | Msa1017750:CDS |
| CGTTTATTGAACATCCTAAT+GGG | 0.385898 | 7_1:+37086289 | Msa1017750:CDS |
| TTTGGGTCATAAATTAGAAA+TGG | 0.389200 | 7_1:+37089155 | Msa1017750:three_prime_UTR |
| AACAAGAGAAGAATTGAGTT+TGG | 0.389941 | 7_1:+37088879 | Msa1017750:CDS |
| ATTTGTTCGTCTTTCCTTTG+TGG | 0.400228 | 7_1:+37086335 | Msa1017750:CDS |
| TGATGTATATAGAAAGATAA+TGG | 0.401299 | 7_1:-37089059 | None:intergenic |
| GGTGGAGAAAGTAGGGGAAT+TGG | 0.406410 | 7_1:+37088984 | Msa1017750:CDS |
| AAAGGCTTGAATCGTGGAAT+AGG | 0.418626 | 7_1:+37085768 | Msa1017750:CDS |
| CAATGATTCATCCTTTGACT+TGG | 0.420523 | 7_1:-37087797 | None:intergenic |
| CAAGTCAAAGGATGAATCAT+TGG | 0.423723 | 7_1:+37087798 | Msa1017750:CDS |
| TTGCGATAATGAAACCCATT+AGG | 0.434149 | 7_1:-37086303 | None:intergenic |
| GGTGTTCTTGCTCATGGAAG+TGG | 0.434740 | 7_1:+37088963 | Msa1017750:CDS |
| ACCATTGTAGGAGGAGGATT+GGG | 0.443083 | 7_1:+37085792 | Msa1017750:CDS |
| AAGGATACAAATACCCATCT+TGG | 0.446776 | 7_1:+37085349 | Msa1017750:CDS |
| GGTTGGAGAACTTCAAGATA+TGG | 0.452146 | 7_1:+37089014 | Msa1017750:CDS |
| TCAATCTAGTAGTGGTATCT+GGG | 0.459166 | 7_1:+37086227 | Msa1017750:CDS |
| AATCCTCTCTTTGATCAAGT+TGG | 0.459918 | 7_1:+37085523 | Msa1017750:CDS |
| GCACAAACCATTGGAGGAGT+TGG | 0.466211 | 7_1:+37085834 | Msa1017750:CDS |
| AAGAACACCAAGCTTGCAAT+TGG | 0.470071 | 7_1:-37088949 | None:intergenic |
| TTATTGTGTAGGTTGCTTGG+AGG | 0.470149 | 7_1:+37087705 | Msa1017750:intron |
| CGTGGAATAGGTACCATTGT+AGG | 0.470283 | 7_1:+37085780 | Msa1017750:CDS |
| TACCATTGTAGGAGGAGGAT+TGG | 0.470726 | 7_1:+37085791 | Msa1017750:CDS |
| ACATATGTATCAATATAGAT+AGG | 0.474060 | 7_1:+37089195 | Msa1017750:three_prime_UTR |
| AGCTGCACTCATTCTTGCAT+TGG | 0.481014 | 7_1:+37088050 | Msa1017750:CDS |
| TGGAAGTGGTGGAGAAAGTA+GGG | 0.481132 | 7_1:+37088977 | Msa1017750:CDS |
| TTATGACCCAAAATCGTGAA+TGG | 0.483023 | 7_1:-37089144 | None:intergenic |
| AGATACCACTACTAGATTGA+AGG | 0.487023 | 7_1:-37086224 | None:intergenic |
| TTAGGAGCTACACTAGGAAA+AGG | 0.488102 | 7_1:+37085750 | Msa1017750:intron |
| CACGTCCAGGTGTGAAAGTG+TGG | 0.490957 | 7_1:+37086251 | Msa1017750:CDS |
| GTGGTATCTGGGGCACGTCC+AGG | 0.492561 | 7_1:+37086238 | Msa1017750:CDS |
| GTTATCTTCTTCATTTGCAA+TGG | 0.493557 | 7_1:-37085293 | None:intergenic |
| TAGAAAGATAATGGAGTTAG+CGG | 0.494161 | 7_1:-37089050 | None:intergenic |
| AGTAGGAATCTCACTTGTGT+TGG | 0.497276 | 7_1:+37085480 | Msa1017750:CDS |
| AAGCTTGGTGTTCTTGCTCA+TGG | 0.499851 | 7_1:+37088957 | Msa1017750:CDS |
| TTAGAACAGTGCGAGGCACT+AGG | 0.503878 | 7_1:+37088760 | Msa1017750:CDS |
| ATGGAAGTGGTGGAGAAAGT+AGG | 0.505241 | 7_1:+37088976 | Msa1017750:CDS |
| AATGACTTGGTCACAGTCCA+AGG | 0.510230 | 7_1:+37085212 | None:intergenic |
| GTTGGAAGTAATTGGAACAA+TGG | 0.511349 | 7_1:-37085389 | None:intergenic |
| GGAGAACTTCAAGATATGGC+TGG | 0.520095 | 7_1:+37089018 | Msa1017750:CDS |
| ATTCTCAAATTCTTCTATCA+CGG | 0.525151 | 7_1:-37088914 | None:intergenic |
| TGGTCACAGTCCAAGGGAAA+GGG | 0.526212 | 7_1:+37085219 | None:intergenic |
| ATGATTCATAGCATCAAAGT+AGG | 0.536279 | 7_1:+37085463 | Msa1017750:CDS |
| AATGCTACCAATTGCAAGCT+TGG | 0.537222 | 7_1:+37088942 | Msa1017750:CDS |
| AGGAGGAGGATTGGGATGCT+TGG | 0.538361 | 7_1:+37085800 | Msa1017750:CDS |
| AATGAGAAAATGTGAAGGAA+GGG | 0.540840 | 7_1:+37088831 | Msa1017750:CDS |
| TGAGTTACCAACTCCTCCAA+TGG | 0.543076 | 7_1:-37085841 | None:intergenic |
| GAATCATCTTCTTAATGTCA+TGG | 0.545845 | 7_1:-37085447 | None:intergenic |
| TTGGTCACAGTCCAAGGGAA+AGG | 0.545992 | 7_1:+37085218 | None:intergenic |
| CAATATTGCTCAAATGAAGA+AGG | 0.547816 | 7_1:+37085330 | Msa1017750:CDS |
| AAATGAGAAAATGTGAAGGA+AGG | 0.547954 | 7_1:+37088830 | Msa1017750:CDS |
| GTCATCTCTGAATTCAATGC+AGG | 0.549001 | 7_1:+37085580 | Msa1017750:CDS |
| AATTCCCACACTTTCACACC+TGG | 0.549998 | 7_1:-37086256 | None:intergenic |
| GCAAAATGGGAACCATGGCA+TGG | 0.551020 | 7_1:+37087964 | Msa1017750:CDS |
| TCCAATTACTTCCAACCCAA+AGG | 0.554902 | 7_1:+37085396 | Msa1017750:CDS |
| TCCCAATCCTCCTCCTACAA+TGG | 0.555686 | 7_1:-37085793 | None:intergenic |
| GTGATAGAAGAATTTGAGAA+TGG | 0.556341 | 7_1:+37088916 | Msa1017750:CDS |
| AATCCAAATTTCCCATGCCA+TGG | 0.563773 | 7_1:-37087976 | None:intergenic |
| GTGTGGACTCTACGAGAAGT+TGG | 0.565330 | 7_1:+37088793 | Msa1017750:CDS |
| GGAATCATGAAGTTCATCAC+TGG | 0.566162 | 7_1:-37086359 | None:intergenic |
| AAATTCTTCTATCACGGACG+TGG | 0.575727 | 7_1:-37088908 | None:intergenic |
| CACTAGGGTCAAGGATTGTG+TGG | 0.575943 | 7_1:+37088776 | Msa1017750:CDS |
| TGACTTGCAAACTGTGAAGC+TGG | 0.578950 | 7_1:-37087764 | None:intergenic |
| CAAAATGGGAACCATGGCAT+GGG | 0.579151 | 7_1:+37087965 | Msa1017750:CDS |
| TAGAACAGTGCGAGGCACTA+GGG | 0.580604 | 7_1:+37088761 | Msa1017750:CDS |
| AGTGCGAGGCACTAGGGTCA+AGG | 0.581564 | 7_1:+37088767 | Msa1017750:CDS |
| AGTGTTAAACTCCAAGTCAA+AGG | 0.581831 | 7_1:+37087786 | Msa1017750:CDS |
| ATTGTGGAATCTTGAGACAA+TGG | 0.586611 | 7_1:-37086380 | None:intergenic |
| ATAGGTACCATTGTAGGAGG+AGG | 0.588595 | 7_1:+37085786 | Msa1017750:CDS |
| AAACTCAAATCATCTACGAC+TGG | 0.590661 | 7_1:-37089087 | None:intergenic |
| GTATTGTATTGGCAAGATTG+TGG | 0.590716 | 7_1:-37086396 | None:intergenic |
| AATCTTGCCAATACAATACA+AGG | 0.592327 | 7_1:+37086400 | Msa1017750:CDS |
| ATTTCGCAAAATGGGAACCA+TGG | 0.593080 | 7_1:+37087959 | Msa1017750:CDS |
| CTAGGAAAAGGCTTGAATCG+TGG | 0.593781 | 7_1:+37085762 | Msa1017750:CDS |
| GTTCTTGCTCATGGAAGTGG+TGG | 0.597706 | 7_1:+37088966 | Msa1017750:CDS |
| AGAAAGATAATGGAGTTAGC+GGG | 0.602534 | 7_1:-37089049 | None:intergenic |
| TAGTCGAAAATATGTAGCAA+CGG | 0.603349 | 7_1:-37086149 | None:intergenic |
| TCACCAACTTGATCAAAGAG+AGG | 0.607413 | 7_1:-37085526 | None:intergenic |
| TAGATATGATTATGGAGTGG+TGG | 0.612279 | 7_1:+37086189 | Msa1017750:CDS |
| GGAATAGGTACCATTGTAGG+AGG | 0.619011 | 7_1:+37085783 | Msa1017750:CDS |
| GCTGACCTTCAATCTAGTAG+TGG | 0.624882 | 7_1:+37086219 | Msa1017750:CDS |
| GGAATGCTCCAAAATAGTCA+AGG | 0.627519 | 7_1:+37087726 | Msa1017750:CDS |
| ACGTCCAGGTGTGAAAGTGT+GGG | 0.632039 | 7_1:+37086252 | Msa1017750:CDS |
| AGTTGGTGAAAATGCAATGT+GGG | 0.635017 | 7_1:+37085540 | Msa1017750:CDS |
| AAACAAATGAGAAAATGTGA+AGG | 0.640374 | 7_1:+37088826 | Msa1017750:CDS |
| ATGACTTGGTCACAGTCCAA+GGG | 0.657640 | 7_1:+37085213 | None:intergenic |
| GGAAGTGGTGGAGAAAGTAG+GGG | 0.662140 | 7_1:+37088978 | Msa1017750:CDS |
| CAATCTAGTAGTGGTATCTG+GGG | 0.672705 | 7_1:+37086228 | Msa1017750:CDS |
| AGTTCATCACTGGCCCACAA+AGG | 0.678071 | 7_1:-37086349 | None:intergenic |
| AGTTCAATTAGAACAGTGCG+AGG | 0.681594 | 7_1:+37088753 | Msa1017750:CDS |
| GAATAGATATGATTATGGAG+TGG | 0.688597 | 7_1:+37086186 | Msa1017750:CDS |
| AACATGTTAGGAGCTACACT+AGG | 0.705610 | 7_1:+37085744 | Msa1017750:intron |
| TGAGATGACATATGACCTCG+TGG | 0.718939 | 7_1:-37089253 | None:intergenic |
| AAGTTGGTGAAAATGCAATG+TGG | 0.725108 | 7_1:+37085539 | Msa1017750:CDS |
| GTATATGATACAAGTCCACG+AGG | 0.787623 | 7_1:+37089238 | Msa1017750:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTACTTCTATTTATTATTA+AGG | + | chr7_1:37087088-37087107 | Msa1017750:intron | 10.0% |
| !!! | AATAAATAAAATTTGTTTAG+AGG | - | chr7_1:37087161-37087180 | None:intergenic | 10.0% |
| !!! | TTTTCTATTTAAAAAAAATG+AGG | + | chr7_1:37087192-37087211 | Msa1017750:intron | 10.0% |
| !!! | ATTTTGCAATTTTTTTTTAA+AGG | + | chr7_1:37087827-37087846 | Msa1017750:intron | 10.0% |
| !! | TCTAAAAAGATATTTAAATT+TGG | - | chr7_1:37088126-37088145 | None:intergenic | 10.0% |
| !! | AAATATTAACTAAAATCAAA+TGG | - | chr7_1:37088379-37088398 | None:intergenic | 10.0% |
| !! | ACAAAAAAAAAATATTTGAT+GGG | + | chr7_1:37088673-37088692 | Msa1017750:intron | 10.0% |
| !!! | AAGTTGATATGTTATTAATA+AGG | + | chr7_1:37086100-37086119 | Msa1017750:intron | 15.0% |
| !!! | TCATATCTATTCTTTATTTT+TGG | - | chr7_1:37086178-37086197 | None:intergenic | 15.0% |
| !! | ATAAAGAATAGATATGATTA+TGG | + | chr7_1:37086181-37086200 | Msa1017750:CDS | 15.0% |
| !!! | ATATTTTAAAATTTGAGCAT+GGG | - | chr7_1:37086704-37086723 | None:intergenic | 15.0% |
| !!! | AATATTTTAAAATTTGAGCA+TGG | - | chr7_1:37086705-37086724 | None:intergenic | 15.0% |
| !! | TTCGTAAGTAATATTAATAA+GGG | - | chr7_1:37087642-37087661 | None:intergenic | 15.0% |
| !! | TTTCGTAAGTAATATTAATA+AGG | - | chr7_1:37087643-37087662 | None:intergenic | 15.0% |
| !!! | TTATAACACTTATTTTTAAC+TGG | + | chr7_1:37087852-37087871 | Msa1017750:intron | 15.0% |
| !!! | TATAACACTTATTTTTAACT+GGG | + | chr7_1:37087853-37087872 | Msa1017750:intron | 15.0% |
| !! | ATTCTATTGTACAAAATAAA+AGG | + | chr7_1:37088261-37088280 | Msa1017750:intron | 15.0% |
| !! | GACAAAAAAAAAATATTTGA+TGG | + | chr7_1:37088672-37088691 | Msa1017750:intron | 15.0% |
| !!! | GTTTTTATTTTTTCCAAGAT+GGG | - | chr7_1:37085365-37085384 | None:intergenic | 20.0% |
| !!! | AGTTTTTATTTTTTCCAAGA+TGG | - | chr7_1:37085366-37085385 | None:intergenic | 20.0% |
| !!! | TATATAGTTTATGCTTTTCT+AGG | + | chr7_1:37086464-37086483 | Msa1017750:intron | 20.0% |
| !! | AATAAAGGAATATGAAACTA+AGG | - | chr7_1:37086606-37086625 | None:intergenic | 20.0% |
| !! | AGGTAGTTATATTATATATC+AGG | - | chr7_1:37086642-37086661 | None:intergenic | 20.0% |
| !!! | GAGTCTTTGTTTAAATATTT+TGG | - | chr7_1:37086682-37086701 | None:intergenic | 20.0% |
| !! | ATTATTCTTCTATAAATGAG+TGG | + | chr7_1:37086722-37086741 | Msa1017750:intron | 20.0% |
| !! | GATTCAACAAATTACAATTA+GGG | + | chr7_1:37086749-37086768 | Msa1017750:intron | 20.0% |
| !! | CAAAAAGAACTCAAAAAATA+TGG | - | chr7_1:37086891-37086910 | None:intergenic | 20.0% |
| !!! | TCGATTTTTTTTTCTTCTTT+GGG | - | chr7_1:37086992-37087011 | None:intergenic | 20.0% |
| !!! | ATCGATTTTTTTTTCTTCTT+TGG | - | chr7_1:37086993-37087012 | None:intergenic | 20.0% |
| !!! | AGTCGCTATTTTATTTTATA+TGG | - | chr7_1:37087250-37087269 | None:intergenic | 20.0% |
| !! | TTGCAATTTATATGCATTAA+GGG | - | chr7_1:37087408-37087427 | None:intergenic | 20.0% |
| !! | TTTGCAATTTATATGCATTA+AGG | - | chr7_1:37087409-37087428 | None:intergenic | 20.0% |
| !! | TCGTAAGTAATATTAATAAG+GGG | - | chr7_1:37087641-37087660 | None:intergenic | 20.0% |
| !!! | ACCATGATATATATTCTTTT+GGG | - | chr7_1:37087682-37087701 | None:intergenic | 20.0% |
| !! | GGCTTATAAAAAATACATTA+TGG | + | chr7_1:37088592-37088611 | Msa1017750:intron | 20.0% |
| !! | TGATGTATATAGAAAGATAA+TGG | - | chr7_1:37089062-37089081 | None:intergenic | 20.0% |
| !! | ACATATGTATCAATATAGAT+AGG | + | chr7_1:37089195-37089214 | Msa1017750:three_prime_UTR | 20.0% |
| !!! | GTCTTATCTTGTAATTTTAA+AGG | + | chr7_1:37089287-37089306 | Msa1017750:three_prime_UTR | 20.0% |
| !!! | TATCTTGTAATTTTAAAGGA+TGG | + | chr7_1:37089291-37089310 | Msa1017750:three_prime_UTR | 20.0% |
| !!! | GCTTATTATTTTTGTCCTTT+GGG | - | chr7_1:37085414-37085433 | None:intergenic | 25.0% |
| !!! | TGCTTATTATTTTTGTCCTT+TGG | - | chr7_1:37085415-37085434 | None:intergenic | 25.0% |
| ! | ATCAATTTGATCAACATGTT+AGG | + | chr7_1:37085732-37085751 | Msa1017750:intron | 25.0% |
| !!! | ATTTTGAAGTCATTTTGTTG+TGG | + | chr7_1:37085941-37085960 | Msa1017750:intron | 25.0% |
| ! | TTGCACATTTCTATATTGAT+CGG | - | chr7_1:37086018-37086037 | None:intergenic | 25.0% |
| ! | GTATATACATGAATGATTAC+AGG | + | chr7_1:37086124-37086143 | Msa1017750:intron | 25.0% |
| ! | ATCTATACCTTGTATTGTAT+TGG | - | chr7_1:37086410-37086429 | None:intergenic | 25.0% |
| !! | ATAGTTGTTTATGTCTCTTT+TGG | - | chr7_1:37086555-37086574 | None:intergenic | 25.0% |
| ! | GCAAAAGAATGTTAAAAATG+TGG | + | chr7_1:37086576-37086595 | Msa1017750:intron | 25.0% |
| ! | GGATTCAACAAATTACAATT+AGG | + | chr7_1:37086748-37086767 | Msa1017750:intron | 25.0% |
| ! | TACATTTGAATTCATGTTGA+GGG | - | chr7_1:37086789-37086808 | None:intergenic | 25.0% |
| ! | AATTCAAATGTACACATTCA+AGG | + | chr7_1:37086797-37086816 | Msa1017750:intron | 25.0% |
| ! | AAGAACTCAAAAAATATGGA+GGG | - | chr7_1:37086887-37086906 | None:intergenic | 25.0% |
| ! | AAAGAACTCAAAAAATATGG+AGG | - | chr7_1:37086888-37086907 | None:intergenic | 25.0% |
| !!! | ATGAGGTTTTTAGTTGTTAA+AGG | + | chr7_1:37087209-37087228 | Msa1017750:intron | 25.0% |
| !!! | TGAGGTTTTTAGTTGTTAAA+GGG | + | chr7_1:37087210-37087229 | Msa1017750:intron | 25.0% |
| ! | CCTATTAATAATATCTGACT+CGG | - | chr7_1:37087330-37087349 | None:intergenic | 25.0% |
| ! | CGAGTCAGATATTATTAATA+GGG | + | chr7_1:37087328-37087347 | Msa1017750:intron | 25.0% |
| !! | GACCATGATATATATTCTTT+TGG | - | chr7_1:37087683-37087702 | None:intergenic | 25.0% |
| !! | TTGATTTTCCTTGACTATTT+TGG | - | chr7_1:37087737-37087756 | None:intergenic | 25.0% |
| !!! | AAAGAATACTTTGTTTTTCC+AGG | + | chr7_1:37087933-37087952 | Msa1017750:intron | 25.0% |
| !!! | TCTTTAAGTATTTTTGCCAT+GGG | - | chr7_1:37088008-37088027 | None:intergenic | 25.0% |
| !!! | ATCTTTAAGTATTTTTGCCA+TGG | - | chr7_1:37088009-37088028 | None:intergenic | 25.0% |
| ! | TGGCAAAAATACTTAAAGAT+TGG | + | chr7_1:37088009-37088028 | Msa1017750:CDS | 25.0% |
| ! | TTTAATGTCTAAAAGTTGCA+TGG | + | chr7_1:37088415-37088434 | Msa1017750:intron | 25.0% |
| ! | TTAATGTCTAAAAGTTGCAT+GGG | + | chr7_1:37088416-37088435 | Msa1017750:intron | 25.0% |
| !!! | TATAATTTTTTTTGTTCCCG+TGG | - | chr7_1:37088458-37088477 | None:intergenic | 25.0% |
| ! | ACGGGAACAAAAAAAATTAT+AGG | + | chr7_1:37088457-37088476 | Msa1017750:intron | 25.0% |
| ! | CGGGAACAAAAAAAATTATA+GGG | + | chr7_1:37088458-37088477 | Msa1017750:intron | 25.0% |
| !!! | ACACGACATCTTTTTATTTT+TGG | - | chr7_1:37088570-37088589 | None:intergenic | 25.0% |
| ! | AAATAAAAAGATGTCGTGTT+TGG | + | chr7_1:37088571-37088590 | Msa1017750:intron | 25.0% |
| !!! | CTGTTCTAATTGAACTTTTT+TGG | - | chr7_1:37088749-37088768 | None:intergenic | 25.0% |
| ! | AAACAAATGAGAAAATGTGA+AGG | + | chr7_1:37088826-37088845 | Msa1017750:CDS | 25.0% |
| ! | ATTCTCAAATTCTTCTATCA+CGG | - | chr7_1:37088917-37088936 | None:intergenic | 25.0% |
| !! | TATTAACCATTCACGATTTT+GGG | + | chr7_1:37089138-37089157 | Msa1017750:three_prime_UTR | 25.0% |
| ! | TTTGGGTCATAAATTAGAAA+TGG | + | chr7_1:37089155-37089174 | Msa1017750:three_prime_UTR | 25.0% |
| !! | ATTTTACAATCGTCTTAAAG+GGG | - | chr7_1:37089326-37089345 | None:intergenic | 25.0% |
| !! | CATTTTACAATCGTCTTAAA+GGG | - | chr7_1:37089327-37089346 | None:intergenic | 25.0% |
| !! | TCATTTTACAATCGTCTTAA+AGG | - | chr7_1:37089328-37089347 | None:intergenic | 25.0% |
| !! | ATTGTAAAATGACCCTTTTT+AGG | + | chr7_1:37089336-37089355 | Msa1017750:three_prime_UTR | 25.0% |
| !!! | GTCATTTTACATCCTAAAAA+GGG | - | chr7_1:37089351-37089370 | None:intergenic | 25.0% |
| !!! | AGTCATTTTACATCCTAAAA+AGG | - | chr7_1:37089352-37089371 | None:intergenic | 25.0% |
| !!! | TTTTTATTTTCCCTTTCCCT+TGG | - | chr7_1:37085232-37085251 | None:intergenic | 30.0% |
| GGAAAGGGAAAATAAAAAGA+GGG | + | chr7_1:37085234-37085253 | Msa1017750:five_prime_UTR | 30.0% | |
| GAAAGGGAAAATAAAAAGAG+GGG | + | chr7_1:37085235-37085254 | Msa1017750:five_prime_UTR | 30.0% | |
| AAAGGGAAAATAAAAAGAGG+GGG | + | chr7_1:37085236-37085255 | Msa1017750:five_prime_UTR | 30.0% | |
| GTTATCTTCTTCATTTGCAA+TGG | - | chr7_1:37085296-37085315 | None:intergenic | 30.0% | |
| CAATATTGCTCAAATGAAGA+AGG | + | chr7_1:37085330-37085349 | Msa1017750:CDS | 30.0% | |
| !!! | ATTATTTTTGTCCTTTGGGT+TGG | - | chr7_1:37085410-37085429 | None:intergenic | 30.0% |
| GAATCATCTTCTTAATGTCA+TGG | - | chr7_1:37085450-37085469 | None:intergenic | 30.0% | |
| ATGATTCATAGCATCAAAGT+AGG | + | chr7_1:37085463-37085482 | Msa1017750:CDS | 30.0% | |
| TATATATAGCAATGCCTCTT+AGG | + | chr7_1:37085684-37085703 | Msa1017750:intron | 30.0% | |
| TTCATCATATATTGCCTAAG+AGG | - | chr7_1:37085701-37085720 | None:intergenic | 30.0% | |
| !!! | GTTGGTAACTCAATTTTCAT+TGG | + | chr7_1:37085852-37085871 | Msa1017750:CDS | 30.0% |
| ! | GGCACTTCAGTTTATATTTT+TGG | + | chr7_1:37085873-37085892 | Msa1017750:CDS | 30.0% |
| TAGTCGAAAATATGTAGCAA+CGG | - | chr7_1:37086152-37086171 | None:intergenic | 30.0% | |
| GAATAGATATGATTATGGAG+TGG | + | chr7_1:37086186-37086205 | Msa1017750:CDS | 30.0% | |
| ACGTTTATTGAACATCCTAA+TGG | + | chr7_1:37086288-37086307 | Msa1017750:CDS | 30.0% | |
| CGTTTATTGAACATCCTAAT+GGG | + | chr7_1:37086289-37086308 | Msa1017750:CDS | 30.0% | |
| AATCTTGCCAATACAATACA+AGG | + | chr7_1:37086400-37086419 | Msa1017750:CDS | 30.0% | |
| TATTCTCATGACCAAATATG+TGG | + | chr7_1:37086517-37086536 | Msa1017750:intron | 30.0% | |
| GGTGAATTACAACACAATAA+AGG | - | chr7_1:37086621-37086640 | None:intergenic | 30.0% | |
| !!! | CTACCTAACTTTTTTTATGC+TGG | + | chr7_1:37086656-37086675 | Msa1017750:intron | 30.0% |
| TTCTTCTATAAATGAGTGGA+TGG | + | chr7_1:37086726-37086745 | Msa1017750:intron | 30.0% | |
| TCTTCTATAAATGAGTGGAT+GGG | + | chr7_1:37086727-37086746 | Msa1017750:intron | 30.0% | |
| GTACATTTGAATTCATGTTG+AGG | - | chr7_1:37086790-37086809 | None:intergenic | 30.0% | |
| TACACATTCAAGGAAAGAAA+AGG | + | chr7_1:37086807-37086826 | Msa1017750:intron | 30.0% | |
| AGAACTCAAAAAATATGGAG+GGG | - | chr7_1:37086886-37086905 | None:intergenic | 30.0% | |
| !!! | TTTTTTCTTCTTTGGGATGA+TGG | - | chr7_1:37086985-37087004 | None:intergenic | 30.0% |
| ATGTACAACGATTAATCTGT+TGG | + | chr7_1:37087062-37087081 | Msa1017750:intron | 30.0% | |
| CCGAGTCAGATATTATTAAT+AGG | + | chr7_1:37087327-37087346 | Msa1017750:intron | 30.0% | |
| !! | AGTCATTTTAGTCCCTAAAT+GGG | - | chr7_1:37087614-37087633 | None:intergenic | 30.0% |
| !! | TAGTCATTTTAGTCCCTAAA+TGG | - | chr7_1:37087615-37087634 | None:intergenic | 30.0% |
| GCCCAAAAGAATATATATCA+TGG | + | chr7_1:37087678-37087697 | Msa1017750:intron | 30.0% | |
| ! | ATCATGGTCTTTTATTGTGT+AGG | + | chr7_1:37087694-37087713 | Msa1017750:intron | 30.0% |
| !!! | ATAAACAGCTACCTTTTTTG+AGG | - | chr7_1:37088091-37088110 | None:intergenic | 30.0% |
| GCACATATAACTAATATCCA+CGG | + | chr7_1:37088438-37088457 | Msa1017750:intron | 30.0% | |
| CACATATAACTAATATCCAC+GGG | + | chr7_1:37088439-37088458 | Msa1017750:intron | 30.0% | |
| !!! | CATCTTTTTATTTTTGGTCG+TGG | - | chr7_1:37088564-37088583 | None:intergenic | 30.0% |
| GCATGATCTAGAAAATGATA+TGG | + | chr7_1:37088640-37088659 | Msa1017750:intron | 30.0% | |
| AAATGAGAAAATGTGAAGGA+AGG | + | chr7_1:37088830-37088849 | Msa1017750:CDS | 30.0% | |
| AATGAGAAAATGTGAAGGAA+GGG | + | chr7_1:37088831-37088850 | Msa1017750:CDS | 30.0% | |
| AACAAGAGAAGAATTGAGTT+TGG | + | chr7_1:37088879-37088898 | Msa1017750:CDS | 30.0% | |
| GTGATAGAAGAATTTGAGAA+TGG | + | chr7_1:37088916-37088935 | Msa1017750:CDS | 30.0% | |
| !! | TAGAAAGATAATGGAGTTAG+CGG | - | chr7_1:37089053-37089072 | None:intergenic | 30.0% |
| ! | GTATTAACCATTCACGATTT+TGG | + | chr7_1:37089137-37089156 | Msa1017750:three_prime_UTR | 30.0% |
| GGGAAAGGGAAAATAAAAAG+AGG | + | chr7_1:37085233-37085252 | Msa1017750:five_prime_UTR | 35.0% | |
| AAGGATACAAATACCCATCT+TGG | + | chr7_1:37085349-37085368 | Msa1017750:CDS | 35.0% | |
| GTTGGAAGTAATTGGAACAA+TGG | - | chr7_1:37085392-37085411 | None:intergenic | 35.0% | |
| AATCCTCTCTTTGATCAAGT+TGG | + | chr7_1:37085523-37085542 | Msa1017750:CDS | 35.0% | |
| !! | AAGTTGGTGAAAATGCAATG+TGG | + | chr7_1:37085539-37085558 | Msa1017750:CDS | 35.0% |
| !! | AGTTGGTGAAAATGCAATGT+GGG | + | chr7_1:37085540-37085559 | Msa1017750:CDS | 35.0% |
| ! | GCAATTTTTGCACAAACCAT+TGG | + | chr7_1:37085825-37085844 | Msa1017750:CDS | 35.0% |
| ! | ATTTTTGCACAAACCATTGG+AGG | + | chr7_1:37085828-37085847 | Msa1017750:CDS | 35.0% |
| ! | ATTGATCGGTGCAATTTTTG+TGG | - | chr7_1:37086004-37086023 | None:intergenic | 35.0% |
| TAGATATGATTATGGAGTGG+TGG | + | chr7_1:37086189-37086208 | Msa1017750:CDS | 35.0% | |
| AGATACCACTACTAGATTGA+AGG | - | chr7_1:37086227-37086246 | None:intergenic | 35.0% | |
| TTCAATCTAGTAGTGGTATC+TGG | + | chr7_1:37086226-37086245 | Msa1017750:CDS | 35.0% | |
| TCAATCTAGTAGTGGTATCT+GGG | + | chr7_1:37086227-37086246 | Msa1017750:CDS | 35.0% | |
| TTGCGATAATGAAACCCATT+AGG | - | chr7_1:37086306-37086325 | None:intergenic | 35.0% | |
| ATTTGTTCGTCTTTCCTTTG+TGG | + | chr7_1:37086335-37086354 | Msa1017750:CDS | 35.0% | |
| TTTGTTCGTCTTTCCTTTGT+GGG | + | chr7_1:37086336-37086355 | Msa1017750:CDS | 35.0% | |
| ATTGTGGAATCTTGAGACAA+TGG | - | chr7_1:37086383-37086402 | None:intergenic | 35.0% | |
| ! | GTATTGTATTGGCAAGATTG+TGG | - | chr7_1:37086399-37086418 | None:intergenic | 35.0% |
| !! | TGTCTCTTTTGGTTGATCTA+GGG | - | chr7_1:37086544-37086563 | None:intergenic | 35.0% |
| !! | ATGTCTCTTTTGGTTGATCT+AGG | - | chr7_1:37086545-37086564 | None:intergenic | 35.0% |
| TGGCCAGCATAAAAAAAGTT+AGG | - | chr7_1:37086662-37086681 | None:intergenic | 35.0% | |
| !!! | AAAAGGACTTATTTTGTGCG+TGG | + | chr7_1:37086824-37086843 | Msa1017750:intron | 35.0% |
| !!! | AAAGGACTTATTTTGTGCGT+GGG | + | chr7_1:37086825-37086844 | Msa1017750:intron | 35.0% |
| ACTAACAGAGTCTACATTCA+GGG | - | chr7_1:37087437-37087456 | None:intergenic | 35.0% | |
| TCAGGGACTAAATTGACTAA+CGG | - | chr7_1:37087484-37087503 | None:intergenic | 35.0% | |
| ACTAACAGAGTCTACATTCA+GGG | - | chr7_1:37087437-37087456 | None:intergenic | 35.0% | |
| AACTCTGTTGGTCAATTTCA+GGG | - | chr7_1:37087533-37087552 | None:intergenic | 35.0% | |
| AAACTCTGTTGGTCAATTTC+AGG | - | chr7_1:37087534-37087553 | None:intergenic | 35.0% | |
| TGACCAACAGAGTTTACATT+CGG | + | chr7_1:37087539-37087558 | Msa1017750:intron | 35.0% | |
| TTTGCAATTTCTCTGCATTC+AGG | + | chr7_1:37087567-37087586 | Msa1017750:intron | 35.0% | |
| TTGCAATTTCTCTGCATTCA+GGG | + | chr7_1:37087568-37087587 | Msa1017750:intron | 35.0% | |
| ! | TTTTAGTCCCTAAATGGGAA+AGG | - | chr7_1:37087609-37087628 | None:intergenic | 35.0% |
| ! | CTTTTATTGTGTAGGTTGCT+TGG | + | chr7_1:37087702-37087721 | Msa1017750:intron | 35.0% |
| AGTGTTAAACTCCAAGTCAA+AGG | + | chr7_1:37087786-37087805 | Msa1017750:CDS | 35.0% | |
| CAATGATTCATCCTTTGACT+TGG | - | chr7_1:37087800-37087819 | None:intergenic | 35.0% | |
| CAAGTCAAAGGATGAATCAT+TGG | + | chr7_1:37087798-37087817 | Msa1017750:CDS | 35.0% | |
| ! | AATTTGGATTTTCCTACCCA+TGG | + | chr7_1:37087989-37088008 | Msa1017750:CDS | 35.0% |
| !! | TAAGTATTTTTGCCATGGGT+AGG | - | chr7_1:37088004-37088023 | None:intergenic | 35.0% |
| !! | AGAAAGATAATGGAGTTAGC+GGG | - | chr7_1:37089052-37089071 | None:intergenic | 35.0% |
| AAACTCAAATCATCTACGAC+TGG | - | chr7_1:37089090-37089109 | None:intergenic | 35.0% | |
| TTATGACCCAAAATCGTGAA+TGG | - | chr7_1:37089147-37089166 | None:intergenic | 35.0% | |
| TCCAATTACTTCCAACCCAA+AGG | + | chr7_1:37085396-37085415 | Msa1017750:CDS | 40.0% | |
| !! | TCCTTTGGGTTGGAAGTAAT+TGG | - | chr7_1:37085400-37085419 | None:intergenic | 40.0% |
| AGTAGGAATCTCACTTGTGT+TGG | + | chr7_1:37085480-37085499 | Msa1017750:CDS | 40.0% | |
| TCACCAACTTGATCAAAGAG+AGG | - | chr7_1:37085529-37085548 | None:intergenic | 40.0% | |
| GTCATCTCTGAATTCAATGC+AGG | + | chr7_1:37085580-37085599 | Msa1017750:CDS | 40.0% | |
| AACATGTTAGGAGCTACACT+AGG | + | chr7_1:37085744-37085763 | Msa1017750:intron | 40.0% | |
| TTAGGAGCTACACTAGGAAA+AGG | + | chr7_1:37085750-37085769 | Msa1017750:intron | 40.0% | |
| AAAGGCTTGAATCGTGGAAT+AGG | + | chr7_1:37085768-37085787 | Msa1017750:CDS | 40.0% | |
| CAATCTAGTAGTGGTATCTG+GGG | + | chr7_1:37086228-37086247 | Msa1017750:CDS | 40.0% | |
| GGAATCATGAAGTTCATCAC+TGG | - | chr7_1:37086362-37086381 | None:intergenic | 40.0% | |
| TGATCTAGGGACCACATATT+TGG | - | chr7_1:37086531-37086550 | None:intergenic | 40.0% | |
| !!! | AAGGACTTATTTTGTGCGTG+GGG | + | chr7_1:37086826-37086845 | Msa1017750:intron | 40.0% |
| TTTAGTCCCTGTAGAGGAAT+AGG | + | chr7_1:37087362-37087381 | Msa1017750:intron | 40.0% | |
| TCCTTTCCTATTCCTCTACA+GGG | - | chr7_1:37087371-37087390 | None:intergenic | 40.0% | |
| GACTAACAGAGTCTACATTC+AGG | - | chr7_1:37087438-37087457 | None:intergenic | 40.0% | |
| ACTAACGGAGTCTGCATTAA+GGG | - | chr7_1:37087469-37087488 | None:intergenic | 40.0% | |
| GACTAACAGAGTCTACATTC+AGG | - | chr7_1:37087438-37087457 | None:intergenic | 40.0% | |
| AGTCCGAATGTAAACTCTGT+TGG | - | chr7_1:37087545-37087564 | None:intergenic | 40.0% | |
| TTATTGTGTAGGTTGCTTGG+AGG | + | chr7_1:37087705-37087724 | Msa1017750:intron | 40.0% | |
| GGAATGCTCCAAAATAGTCA+AGG | + | chr7_1:37087726-37087745 | Msa1017750:CDS | 40.0% | |
| TCCAGGCAAATTTCGCAAAA+TGG | + | chr7_1:37087950-37087969 | Msa1017750:intron | 40.0% | |
| CCAGGCAAATTTCGCAAAAT+GGG | + | chr7_1:37087951-37087970 | Msa1017750:intron | 40.0% | |
| ATTTCGCAAAATGGGAACCA+TGG | + | chr7_1:37087959-37087978 | Msa1017750:CDS | 40.0% | |
| AATCCAAATTTCCCATGCCA+TGG | - | chr7_1:37087979-37087998 | None:intergenic | 40.0% | |
| TTGCTTCCAAGCCTCAAAAA+AGG | + | chr7_1:37088077-37088096 | Msa1017750:CDS | 40.0% | |
| ! | ACGATGTCTCAATCTAAGGT+AGG | - | chr7_1:37088217-37088236 | None:intergenic | 40.0% |
| GATGACGATGTCTCAATCTA+AGG | - | chr7_1:37088221-37088240 | None:intergenic | 40.0% | |
| AGTTCAATTAGAACAGTGCG+AGG | + | chr7_1:37088753-37088772 | Msa1017750:CDS | 40.0% | |
| AAATTCTTCTATCACGGACG+TGG | - | chr7_1:37088911-37088930 | None:intergenic | 40.0% | |
| AATGCTACCAATTGCAAGCT+TGG | + | chr7_1:37088942-37088961 | Msa1017750:CDS | 40.0% | |
| AAGAACACCAAGCTTGCAAT+TGG | - | chr7_1:37088952-37088971 | None:intergenic | 40.0% | |
| AGTAGGGGAATTGGTTATAG+AGG | + | chr7_1:37088993-37089012 | Msa1017750:CDS | 40.0% | |
| GGTTGGAGAACTTCAAGATA+TGG | + | chr7_1:37089014-37089033 | Msa1017750:CDS | 40.0% | |
| GTATATGATACAAGTCCACG+AGG | + | chr7_1:37089238-37089257 | Msa1017750:three_prime_UTR | 40.0% | |
| GAGGGGGAGTAAAGACAAAA+TGG | + | chr7_1:37085252-37085271 | Msa1017750:exon | 45.0% | |
| CTAGGAAAAGGCTTGAATCG+TGG | + | chr7_1:37085762-37085781 | Msa1017750:CDS | 45.0% | |
| CGTGGAATAGGTACCATTGT+AGG | + | chr7_1:37085780-37085799 | Msa1017750:CDS | 45.0% | |
| GGAATAGGTACCATTGTAGG+AGG | + | chr7_1:37085783-37085802 | Msa1017750:CDS | 45.0% | |
| ATAGGTACCATTGTAGGAGG+AGG | + | chr7_1:37085786-37085805 | Msa1017750:CDS | 45.0% | |
| TACCATTGTAGGAGGAGGAT+TGG | + | chr7_1:37085791-37085810 | Msa1017750:CDS | 45.0% | |
| ACCATTGTAGGAGGAGGATT+GGG | + | chr7_1:37085792-37085811 | Msa1017750:CDS | 45.0% | |
| TGAGTTACCAACTCCTCCAA+TGG | - | chr7_1:37085844-37085863 | None:intergenic | 45.0% | |
| GCTGACCTTCAATCTAGTAG+TGG | + | chr7_1:37086219-37086238 | Msa1017750:CDS | 45.0% | |
| AATTCCCACACTTTCACACC+TGG | - | chr7_1:37086259-37086278 | None:intergenic | 45.0% | |
| !!! | AGGACTTATTTTGTGCGTGG+GGG | + | chr7_1:37086827-37086846 | Msa1017750:intron | 45.0% |
| CTCAAAAAATATGGAGGGGC+TGG | - | chr7_1:37086882-37086901 | None:intergenic | 45.0% | |
| AAAGCCCTTCATGCATAGAG+AGG | + | chr7_1:37087279-37087298 | Msa1017750:intron | 45.0% | |
| AAGCCCTTCATGCATAGAGA+GGG | + | chr7_1:37087280-37087299 | Msa1017750:intron | 45.0% | |
| CTACCCTCTCTATGCATGAA+GGG | - | chr7_1:37087286-37087305 | None:intergenic | 45.0% | |
| TCTACCCTCTCTATGCATGA+AGG | - | chr7_1:37087287-37087306 | None:intergenic | 45.0% | |
| ! | AGTCACTTTAGTCCCTGTAG+AGG | + | chr7_1:37087356-37087375 | Msa1017750:intron | 45.0% |
| TCCCTGTAGAGGAATAGGAA+AGG | + | chr7_1:37087367-37087386 | Msa1017750:intron | 45.0% | |
| CTCCTTTCCTATTCCTCTAC+AGG | - | chr7_1:37087372-37087391 | None:intergenic | 45.0% | |
| GACTAACGGAGTCTGCATTA+AGG | - | chr7_1:37087470-37087489 | None:intergenic | 45.0% | |
| TGACCACTCCTTTCCCATTT+AGG | + | chr7_1:37087598-37087617 | Msa1017750:intron | 45.0% | |
| GACCACTCCTTTCCCATTTA+GGG | + | chr7_1:37087599-37087618 | Msa1017750:intron | 45.0% | |
| CAAACTGTGAAGCTGGTATC+TGG | - | chr7_1:37087760-37087779 | None:intergenic | 45.0% | |
| ! | TGACTTGCAAACTGTGAAGC+TGG | - | chr7_1:37087767-37087786 | None:intergenic | 45.0% |
| ! | CCCATTTTGCGAAATTTGCC+TGG | - | chr7_1:37087954-37087973 | None:intergenic | 45.0% |
| CAAAATGGGAACCATGGCAT+GGG | + | chr7_1:37087965-37087984 | Msa1017750:CDS | 45.0% | |
| GAACCATGGCATGGGAAATT+TGG | + | chr7_1:37087973-37087992 | Msa1017750:CDS | 45.0% | |
| AGCTGCACTCATTCTTGCAT+TGG | + | chr7_1:37088050-37088069 | Msa1017750:CDS | 45.0% | |
| !!! | CAGCTACCTTTTTTGAGGCT+TGG | - | chr7_1:37088086-37088105 | None:intergenic | 45.0% |
| !! | AAGCTTGGTGTTCTTGCTCA+TGG | + | chr7_1:37088957-37088976 | Msa1017750:CDS | 45.0% |
| ! | ATGGAAGTGGTGGAGAAAGT+AGG | + | chr7_1:37088976-37088995 | Msa1017750:CDS | 45.0% |
| ! | TGGAAGTGGTGGAGAAAGTA+GGG | + | chr7_1:37088977-37088996 | Msa1017750:CDS | 45.0% |
| GGGGAATTGGTTATAGAGGT+TGG | + | chr7_1:37088997-37089016 | Msa1017750:CDS | 45.0% | |
| GGAGAACTTCAAGATATGGC+TGG | + | chr7_1:37089018-37089037 | Msa1017750:CDS | 45.0% | |
| TGAGATGACATATGACCTCG+TGG | - | chr7_1:37089256-37089275 | None:intergenic | 45.0% | |
| !! | TATAATAATTTATACATAAA+TGG | - | chr7_1:37086060-37086079 | None:intergenic | 5.0% |
| !! | TTTATGTATAAATTATTATA+AGG | + | chr7_1:37086060-37086079 | Msa1017750:intron | 5.0% |
| TCCCAATCCTCCTCCTACAA+TGG | - | chr7_1:37085796-37085815 | None:intergenic | 50.0% | |
| GCACAAACCATTGGAGGAGT+TGG | + | chr7_1:37085834-37085853 | Msa1017750:CDS | 50.0% | |
| ! | ACGTCCAGGTGTGAAAGTGT+GGG | + | chr7_1:37086252-37086271 | Msa1017750:CDS | 50.0% |
| AGTTCATCACTGGCCCACAA+AGG | - | chr7_1:37086352-37086371 | None:intergenic | 50.0% | |
| !!! | GGACTTATTTTGTGCGTGGG+GGG | + | chr7_1:37086828-37086847 | Msa1017750:intron | 50.0% |
| GTCCCTAAATGGGAAAGGAG+TGG | - | chr7_1:37087604-37087623 | None:intergenic | 50.0% | |
| GCAAAATGGGAACCATGGCA+TGG | + | chr7_1:37087964-37087983 | Msa1017750:CDS | 50.0% | |
| ! | TTAGAACAGTGCGAGGCACT+AGG | + | chr7_1:37088760-37088779 | Msa1017750:CDS | 50.0% |
| ! | TAGAACAGTGCGAGGCACTA+GGG | + | chr7_1:37088761-37088780 | Msa1017750:CDS | 50.0% |
| CACTAGGGTCAAGGATTGTG+TGG | + | chr7_1:37088776-37088795 | Msa1017750:CDS | 50.0% | |
| GTGTGGACTCTACGAGAAGT+TGG | + | chr7_1:37088793-37088812 | Msa1017750:CDS | 50.0% | |
| GGTGTTCTTGCTCATGGAAG+TGG | + | chr7_1:37088963-37088982 | Msa1017750:CDS | 50.0% | |
| GTTCTTGCTCATGGAAGTGG+TGG | + | chr7_1:37088966-37088985 | Msa1017750:CDS | 50.0% | |
| ! | GGAAGTGGTGGAGAAAGTAG+GGG | + | chr7_1:37088978-37088997 | Msa1017750:CDS | 50.0% |
| GGTGGAGAAAGTAGGGGAAT+TGG | + | chr7_1:37088984-37089003 | Msa1017750:CDS | 50.0% | |
| AGGAGGAGGATTGGGATGCT+TGG | + | chr7_1:37085800-37085819 | Msa1017750:CDS | 55.0% | |
| CACGTCCAGGTGTGAAAGTG+TGG | + | chr7_1:37086251-37086270 | Msa1017750:CDS | 55.0% | |
| AGCCACCTACAAGGCTGCAT+GGG | + | chr7_1:37086854-37086873 | Msa1017750:intron | 55.0% | |
| GAGCCACCTACAAGGCTGCA+TGG | + | chr7_1:37086853-37086872 | Msa1017750:intron | 60.0% | |
| ! | AGCCCATGCAGCCTTGTAGG+TGG | - | chr7_1:37086859-37086878 | None:intergenic | 60.0% |
| ! | TGGAGCCCATGCAGCCTTGT+AGG | - | chr7_1:37086862-37086881 | None:intergenic | 60.0% |
| ! | AGTGCGAGGCACTAGGGTCA+AGG | + | chr7_1:37088767-37088786 | Msa1017750:CDS | 60.0% |
| ! | GTGGTATCTGGGGCACGTCC+AGG | + | chr7_1:37086238-37086257 | Msa1017750:CDS | 65.0% |
| GGGGGGCAGAGCCACCTACA+AGG | + | chr7_1:37086845-37086864 | Msa1017750:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 37085227 | 37089402 | 37085227 | ID=Msa1017750;Name=Msa1017750 |
| chr7_1 | mRNA | 37085227 | 37089402 | 37085227 | ID=Msa1017750-mRNA-1;Parent=Msa1017750;Name=Msa1017750-mRNA-1;_AED=0.05;_eAED=0.05;_QI=44|1|1|1|1|1|6|346|442 |
| chr7_1 | exon | 37085227 | 37085601 | 37085227 | ID=Msa1017750-mRNA-1:exon:7098;Parent=Msa1017750-mRNA-1 |
| chr7_1 | exon | 37085754 | 37085894 | 37085754 | ID=Msa1017750-mRNA-1:exon:7099;Parent=Msa1017750-mRNA-1 |
| chr7_1 | exon | 37086146 | 37086421 | 37086146 | ID=Msa1017750-mRNA-1:exon:7100;Parent=Msa1017750-mRNA-1 |
| chr7_1 | exon | 37087716 | 37087819 | 37087716 | ID=Msa1017750-mRNA-1:exon:7101;Parent=Msa1017750-mRNA-1 |
| chr7_1 | exon | 37087955 | 37088098 | 37087955 | ID=Msa1017750-mRNA-1:exon:7102;Parent=Msa1017750-mRNA-1 |
| chr7_1 | exon | 37088724 | 37089402 | 37088724 | ID=Msa1017750-mRNA-1:exon:7103;Parent=Msa1017750-mRNA-1 |
| chr7_1 | five_prime_UTR | 37085227 | 37085270 | 37085227 | ID=Msa1017750-mRNA-1:five_prime_utr;Parent=Msa1017750-mRNA-1 |
| chr7_1 | CDS | 37085271 | 37085601 | 37085271 | ID=Msa1017750-mRNA-1:cds;Parent=Msa1017750-mRNA-1 |
| chr7_1 | CDS | 37085754 | 37085894 | 37085754 | ID=Msa1017750-mRNA-1:cds;Parent=Msa1017750-mRNA-1 |
| chr7_1 | CDS | 37086146 | 37086421 | 37086146 | ID=Msa1017750-mRNA-1:cds;Parent=Msa1017750-mRNA-1 |
| chr7_1 | CDS | 37087716 | 37087819 | 37087716 | ID=Msa1017750-mRNA-1:cds;Parent=Msa1017750-mRNA-1 |
| chr7_1 | CDS | 37087955 | 37088098 | 37087955 | ID=Msa1017750-mRNA-1:cds;Parent=Msa1017750-mRNA-1 |
| chr7_1 | CDS | 37088724 | 37089056 | 37088724 | ID=Msa1017750-mRNA-1:cds;Parent=Msa1017750-mRNA-1 |
| chr7_1 | three_prime_UTR | 37089057 | 37089402 | 37089057 | ID=Msa1017750-mRNA-1:three_prime_utr;Parent=Msa1017750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
