Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076080 | XP_013449742.1 | 99.027 | 411 | 4 | 0 | 1 | 411 | 1 | 411 | 0.0 | 839 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076080 | sp|Q99633|PRP18_HUMAN | 35.459 | 392 | 187 | 9 | 1 | 376 | 1 | 342 | 1.40e-63 | 210 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076080 | A0A072UD53 | 99.027 | 411 | 4 | 0 | 1 | 411 | 1 | 411 | 0.0 | 839 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1076080 | Msa1163140 | 0.945346 | 3.627129e-104 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076080 | MtrunA17_Chr7g0259901 | 99.027 | 411 | 4 | 0 | 1 | 411 | 1 | 411 | 0.0 | 839 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076080 | AT1G03140.1 | 70.755 | 424 | 107 | 3 | 1 | 411 | 1 | 420 | 0.0 | 564 |
| Msa1076080 | AT1G54590.1 | 65.411 | 292 | 76 | 7 | 122 | 407 | 85 | 357 | 6.31e-127 | 371 |
Find 140 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATATGATAATGTCAATTA+AGG | 0.185033 | 7_2:-74491352 | None:intergenic |
| CTGTATGAGGCGAGATTATC+TGG | 0.294838 | 7_2:+74490976 | Msa1076080:CDS |
| AAACAACCTGTGACGTTATT+CGG | 0.305283 | 7_2:+74487613 | Msa1076080:CDS |
| TTTCTTGCCGCCGGTTTCTT+CGG | 0.312109 | 7_2:-74487332 | None:intergenic |
| GCATGTACTTCAGGTTCTTC+AGG | 0.319015 | 7_2:+74490916 | Msa1076080:intron |
| AGCAGTTGAGTTTAACAGTT+TGG | 0.335075 | 7_2:+74491213 | Msa1076080:CDS |
| CGGCGGATGACTTCTTGTTT+AGG | 0.340183 | 7_2:-74487577 | None:intergenic |
| CTTAAATACGTTCTCAAAGC+TGG | 0.353113 | 7_2:+74487664 | Msa1076080:CDS |
| CTGGCCTATCGGTGTTACTA+TGG | 0.360585 | 7_2:+74491042 | Msa1076080:CDS |
| TGAGAAGCTCTTGCTTTAGA+AGG | 0.370756 | 7_2:-74487291 | None:intergenic |
| GTGTGATGAGGACAAGATTT+TGG | 0.374080 | 7_2:+74487933 | Msa1076080:CDS |
| TAGAACTGTAAAGAAGATTC+AGG | 0.374392 | 7_2:-74491555 | None:intergenic |
| AGAAGGTCCATCTAGGGTTT+CGG | 0.380166 | 7_2:-74487274 | None:intergenic |
| TTAAACTCAACTGCTTTAGA+TGG | 0.395372 | 7_2:-74491205 | None:intergenic |
| TGTTCGATTTCCACCCCATT+TGG | 0.396431 | 7_2:+74491606 | Msa1076080:three_prime_UTR |
| GTTTATAGTATAGTCAGTTC+AGG | 0.401333 | 7_2:+74491484 | Msa1076080:three_prime_UTR |
| TTCGTCGGGGAGGGAAGCGC+TGG | 0.401745 | 7_2:-74487530 | None:intergenic |
| CTGCAATGGACCATTATATC+AGG | 0.408980 | 7_2:+74490999 | Msa1076080:CDS |
| TTGCTTTAGAAGGTCCATCT+AGG | 0.412477 | 7_2:-74487281 | None:intergenic |
| TCACAGGTTGTTTGAGAAAC+CGG | 0.418075 | 7_2:-74487603 | None:intergenic |
| CGGAGAAGCGGACGGCTAAA+GGG | 0.420729 | 7_2:+74488013 | Msa1076080:CDS |
| AAAATAAATTAACTATCTCT+TGG | 0.424273 | 7_2:-74491328 | None:intergenic |
| CGGTTTCTTCGGCTAGGGAT+TGG | 0.425410 | 7_2:-74487321 | None:intergenic |
| AGTTTAACAGTTTGGCAAAT+GGG | 0.428747 | 7_2:+74491221 | Msa1076080:CDS |
| CGATAGCCAGCCTGATATAA+TGG | 0.430348 | 7_2:-74491009 | None:intergenic |
| TTCAGTGTTCTGATCGGAAA+AGG | 0.433296 | 7_2:-74487226 | None:intergenic |
| GGACGAAGGTGCGGTGGTGG+TGG | 0.434541 | 7_2:-74487253 | None:intergenic |
| TCGGCAGGCACTAATGTTGA+TGG | 0.435972 | 7_2:+74490946 | Msa1076080:CDS |
| TTCGGACGAAGGTGCGGTGG+TGG | 0.436458 | 7_2:-74487256 | None:intergenic |
| TGGCTATCGGGAATGCTCCC+TGG | 0.443575 | 7_2:+74491023 | Msa1076080:CDS |
| ACGGAGAAGCGGACGGCTAA+AGG | 0.445518 | 7_2:+74488012 | Msa1076080:CDS |
| CCTTCGTCCGAAACCCTAGA+TGG | 0.449110 | 7_2:+74487267 | Msa1076080:exon |
| GAGTTTAACAGTTTGGCAAA+TGG | 0.450367 | 7_2:+74491220 | Msa1076080:CDS |
| AAGAAGTCATCCGCCGTCTC+CGG | 0.452806 | 7_2:+74487584 | Msa1076080:CDS |
| AGTCAGTTCAGGCGCAGTTT+CGG | 0.454057 | 7_2:+74491495 | Msa1076080:three_prime_UTR |
| TTGAGGAAGAGGCAGAAGAC+GGG | 0.457591 | 7_2:+74487754 | Msa1076080:CDS |
| GATTTGTTTCTGTTGGATCT+CGG | 0.459315 | 7_2:-74487368 | None:intergenic |
| GTATCGCGCACACTGCTTGA+AGG | 0.459806 | 7_2:-74488052 | None:intergenic |
| AGCGGCGGAGGTGACGGAGG+AGG | 0.463997 | 7_2:-74487500 | None:intergenic |
| GAGGATGGTGATGGTGGTGC+TGG | 0.465798 | 7_2:+74487823 | Msa1076080:CDS |
| ATTGCACGGATTCTCAATAC+TGG | 0.466817 | 7_2:-74491386 | None:intergenic |
| GCTGTTGAATGAGTGGAAAC+AGG | 0.467823 | 7_2:+74487969 | Msa1076080:CDS |
| AGTCGTCTGAGGAGAGGCTT+AGG | 0.468760 | 7_2:+74491293 | Msa1076080:CDS |
| CATTATATCAGGCTGGCTAT+CGG | 0.468919 | 7_2:+74491010 | Msa1076080:CDS |
| CATATGATAATGTCAATTAA+GGG | 0.469576 | 7_2:-74491351 | None:intergenic |
| TATGGGGTAACAAGACCAAA+TGG | 0.469893 | 7_2:-74491621 | None:intergenic |
| TGCTTTAGAAGGTCCATCTA+GGG | 0.472036 | 7_2:-74487280 | None:intergenic |
| GCTGGATGAAGCAGCGGCGG+AGG | 0.472515 | 7_2:-74487512 | None:intergenic |
| ATTATATCAGGCTGGCTATC+GGG | 0.475178 | 7_2:+74491011 | Msa1076080:CDS |
| GACGGCTAAAGGGAAGTCTA+TGG | 0.476462 | 7_2:+74488023 | Msa1076080:CDS |
| CAATCCCTAGCCGAAGAAAC+CGG | 0.477260 | 7_2:+74487322 | Msa1076080:CDS |
| TTAGCAGAAGAGAGATTTAG+TGG | 0.482256 | 7_2:+74491262 | Msa1076080:CDS |
| GGGAATGCTCCCTGGCCTAT+CGG | 0.486347 | 7_2:+74491031 | Msa1076080:CDS |
| CTATACTATAAACTAATACT+AGG | 0.491395 | 7_2:-74491474 | None:intergenic |
| TCCTACAAAACTTAAACAGC+GGG | 0.493480 | 7_2:-74488080 | None:intergenic |
| GATGATGATTTGAGTGATTG+TGG | 0.495482 | 7_2:+74487847 | Msa1076080:CDS |
| CTGCTTTAGATGGCAGTGTC+GGG | 0.496151 | 7_2:-74491195 | None:intergenic |
| TGATTTCTTGCGTGATATTG+CGG | 0.497819 | 7_2:+74487729 | Msa1076080:CDS |
| GAGGATGGTGCTGCTGAGGA+TGG | 0.497989 | 7_2:+74487808 | Msa1076080:CDS |
| AGGTTCTTCAGGATGACATT+CGG | 0.502212 | 7_2:+74490927 | Msa1076080:intron |
| GTTGGTTGATGAGGTAGTTA+CGG | 0.507292 | 7_2:-74487473 | None:intergenic |
| ATGGGGTAACAAGACCAAAT+GGG | 0.507411 | 7_2:-74491620 | None:intergenic |
| TGCCGCCGGTTTCTTCGGCT+AGG | 0.513870 | 7_2:-74487327 | None:intergenic |
| GAGAATCCGTGCAATGTATG+AGG | 0.514561 | 7_2:+74491394 | Msa1076080:three_prime_UTR |
| TAGTGGTGGTGATAATGATA+AGG | 0.515615 | 7_2:+74487876 | Msa1076080:CDS |
| TGAAGCAGCGGCGGAGGTGA+CGG | 0.515872 | 7_2:-74487506 | None:intergenic |
| CATAGTAACACCGATAGGCC+AGG | 0.517646 | 7_2:-74491041 | None:intergenic |
| TAAGGATTTGAAAAGGATGA+AGG | 0.521027 | 7_2:+74487894 | Msa1076080:CDS |
| ATTTCTCCTCATACATTGCA+CGG | 0.521071 | 7_2:-74491400 | None:intergenic |
| GTTGCGTGAGATGGCGGAGA+CGG | 0.528632 | 7_2:+74487993 | Msa1076080:CDS |
| AGTGATTGTGGTGGATCTAG+TGG | 0.530233 | 7_2:+74487859 | Msa1076080:CDS |
| GCGAGATTATCTGGCTGCAA+TGG | 0.530625 | 7_2:+74490985 | Msa1076080:CDS |
| CAAAGCTGGATTGTTTGAAG+TGG | 0.534244 | 7_2:+74487678 | Msa1076080:CDS |
| AATTAACTATCTCTTGGAGC+AGG | 0.536566 | 7_2:-74491322 | None:intergenic |
| CCTATCGGTGTTACTATGGT+TGG | 0.537411 | 7_2:+74491046 | Msa1076080:CDS |
| GGTGGAGACGGTGTCGGTGG+TGG | 0.537446 | 7_2:-74487452 | None:intergenic |
| CTTCTTGTTTAGGAAGGACG+AGG | 0.539570 | 7_2:-74487567 | None:intergenic |
| ATAATGATAAGGATTTGAAA+AGG | 0.540471 | 7_2:+74487887 | Msa1076080:CDS |
| TTAAGAAGCTGTTGAATGAG+TGG | 0.541386 | 7_2:+74487962 | Msa1076080:CDS |
| TCTTCAGGATGACATTCGGC+AGG | 0.544712 | 7_2:+74490931 | Msa1076080:CDS |
| GTTGAGGAAGAGGCAGAAGA+CGG | 0.547478 | 7_2:+74487753 | Msa1076080:CDS |
| GGTGCTGCTGAGGATGGTGA+TGG | 0.548826 | 7_2:+74487814 | Msa1076080:CDS |
| TAGCAGAAGAGAGATTTAGT+GGG | 0.549817 | 7_2:+74491263 | Msa1076080:CDS |
| AAGCGGCAGAAGGCGGAGGA+TGG | 0.550000 | 7_2:+74487793 | Msa1076080:CDS |
| ACTGCTTTAGATGGCAGTGT+CGG | 0.551623 | 7_2:-74491196 | None:intergenic |
| TTCCTACAAAACTTAAACAG+CGG | 0.554797 | 7_2:-74488081 | None:intergenic |
| GGATGACTTCTTGTTTAGGA+AGG | 0.558895 | 7_2:-74487573 | None:intergenic |
| TTTGAAGAATTTCTTGCCGC+CGG | 0.562591 | 7_2:-74487341 | None:intergenic |
| TGATGGTTGACTGCTGTATG+AGG | 0.563302 | 7_2:+74490963 | Msa1076080:CDS |
| GGAGCGAAACTTAAAACCAA+GGG | 0.566951 | 7_2:-74491453 | None:intergenic |
| GGTTGGTATTCACGAAAGAT+CGG | 0.567075 | 7_2:+74491063 | Msa1076080:CDS |
| TAGGAAGCGGCAGAAGGCGG+AGG | 0.573088 | 7_2:+74487789 | Msa1076080:CDS |
| GAGTGATAGGAAGCGGCAGA+AGG | 0.573616 | 7_2:+74487783 | Msa1076080:CDS |
| GGTTTCGGACGAAGGTGCGG+TGG | 0.576071 | 7_2:-74487259 | None:intergenic |
| ACGATGATGCGAGACTCGAT+CGG | 0.578071 | 7_2:+74487641 | Msa1076080:CDS |
| ACAGGAGTTGCGTGAGATGG+CGG | 0.582423 | 7_2:+74487987 | Msa1076080:CDS |
| GCTGCTGAGGATGGTGATGG+TGG | 0.582674 | 7_2:+74487817 | Msa1076080:CDS |
| GGTGACGGAGGAGGAAGCGT+TGG | 0.583513 | 7_2:-74487491 | None:intergenic |
| AGCAGAAGAGAGATTTAGTG+GGG | 0.589925 | 7_2:+74491264 | Msa1076080:CDS |
| CCATCTAGGGTTTCGGACGA+AGG | 0.591433 | 7_2:-74487267 | None:intergenic |
| AATGGACCATTATATCAGGC+TGG | 0.593837 | 7_2:+74491003 | Msa1076080:CDS |
| AGCGCTGGATGAAGCAGCGG+CGG | 0.595214 | 7_2:-74487515 | None:intergenic |
| ATATTGCGGAGTTGAGGAAG+AGG | 0.597099 | 7_2:+74487743 | Msa1076080:CDS |
| GGAGGAAGCGTTGGTTGATG+AGG | 0.597302 | 7_2:-74487482 | None:intergenic |
| GAAACAGGAGTTGCGTGAGA+TGG | 0.597500 | 7_2:+74487984 | Msa1076080:CDS |
| TGGGGTAACAAGACCAAATG+GGG | 0.601668 | 7_2:-74491619 | None:intergenic |
| GGCGGAGGATGGTGCTGCTG+AGG | 0.603000 | 7_2:+74487804 | Msa1076080:CDS |
| AGATGGCGGAGACGGAGAAG+CGG | 0.603954 | 7_2:+74488001 | Msa1076080:CDS |
| TGAGGTAGTTACGGTGGAGA+CGG | 0.604438 | 7_2:-74487464 | None:intergenic |
| GGCGGAGACGGAGAAGCGGA+CGG | 0.607467 | 7_2:+74488005 | Msa1076080:CDS |
| TGAGGAAGAGGCAGAAGACG+GGG | 0.610880 | 7_2:+74487755 | Msa1076080:CDS |
| TGAAGTGGATAGTGATATGA+CGG | 0.612285 | 7_2:+74487693 | Msa1076080:CDS |
| GATTGTGGTGGATCTAGTGG+TGG | 0.612515 | 7_2:+74487862 | Msa1076080:CDS |
| AGTACTTACAATCAGTGAAG+AGG | 0.612562 | 7_2:+74491146 | Msa1076080:CDS |
| TAGGGTTTCGGACGAAGGTG+CGG | 0.617042 | 7_2:-74487262 | None:intergenic |
| TGATAGGAAGCGGCAGAAGG+CGG | 0.617704 | 7_2:+74487786 | Msa1076080:CDS |
| TCTTCGCCGAATAACGTCAC+AGG | 0.618610 | 7_2:-74487619 | None:intergenic |
| GGAAGCGCTGGATGAAGCAG+CGG | 0.620240 | 7_2:-74487518 | None:intergenic |
| AGCAGCGGCGGAGGTGACGG+AGG | 0.622368 | 7_2:-74487503 | None:intergenic |
| TGCGTGATATTGCGGAGTTG+AGG | 0.622575 | 7_2:+74487737 | Msa1076080:CDS |
| TACGGTGGAGACGGTGTCGG+TGG | 0.627676 | 7_2:-74487455 | None:intergenic |
| GTGGATAGTGATATGACGGA+AGG | 0.630455 | 7_2:+74487697 | Msa1076080:CDS |
| GGTTTGTTCAGTGTTCTGAT+CGG | 0.631334 | 7_2:-74487232 | None:intergenic |
| GCAATCAGTCGTCTGAGGAG+AGG | 0.632643 | 7_2:+74491287 | Msa1076080:CDS |
| GTTTGAGAAACCGGAGACGG+CGG | 0.644055 | 7_2:-74487594 | None:intergenic |
| ATAGTAACACCGATAGGCCA+GGG | 0.645385 | 7_2:-74491040 | None:intergenic |
| GATGATTTGAGTGATTGTGG+TGG | 0.645582 | 7_2:+74487850 | Msa1076080:CDS |
| AGGAGCGAAACTTAAAACCA+AGG | 0.650880 | 7_2:-74491454 | None:intergenic |
| GTTGTTTGAGAAACCGGAGA+CGG | 0.656084 | 7_2:-74487597 | None:intergenic |
| CCAACCATAGTAACACCGAT+AGG | 0.659700 | 7_2:-74491046 | None:intergenic |
| AGTTACGGTGGAGACGGTGT+CGG | 0.660264 | 7_2:-74487458 | None:intergenic |
| AGTTTCGGTAAGCACTACAA+TGG | 0.667769 | 7_2:+74491510 | Msa1076080:three_prime_UTR |
| GCAGAAGAGAGATTTAGTGG+GGG | 0.669816 | 7_2:+74491265 | Msa1076080:CDS |
| GGTTGATGAGGTAGTTACGG+TGG | 0.678488 | 7_2:-74487470 | None:intergenic |
| GCGAAACTTAAAACCAAGGG+GGG | 0.683849 | 7_2:-74491450 | None:intergenic |
| TTTCGATGAGCTGTGTGATG+AGG | 0.685117 | 7_2:+74487921 | Msa1076080:CDS |
| GAGCGAAACTTAAAACCAAG+GGG | 0.695446 | 7_2:-74491452 | None:intergenic |
| GGTAACAAGACCAAATGGGG+TGG | 0.698675 | 7_2:-74491616 | None:intergenic |
| TCCCTAGCCGAAGAAACCGG+CGG | 0.703034 | 7_2:+74487325 | Msa1076080:CDS |
| AGCGAAACTTAAAACCAAGG+GGG | 0.730880 | 7_2:-74491451 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTATATTCTATATTTTA+AGG | + | chr7_2:74488434-74488453 | Msa1076080:intron | 10.0% |
| !! | TTGTATTCTAATTAATAAAA+TGG | + | chr7_2:74490886-74490905 | Msa1076080:intron | 10.0% |
| !!! | AGTTTAAAACAAATTGAATT+AGG | + | chr7_2:74488338-74488357 | Msa1076080:intron | 15.0% |
| !!! | TAGATGTTTTATATTTTTGT+TGG | + | chr7_2:74488551-74488570 | Msa1076080:intron | 15.0% |
| !! | AAATTGTTTAATATACAATC+AGG | + | chr7_2:74488840-74488859 | Msa1076080:intron | 15.0% |
| !!! | GAAAATAACATGATATTTTA+TGG | + | chr7_2:74489690-74489709 | Msa1076080:intron | 15.0% |
| !!! | GGCAATTTTATATTTTATTT+TGG | + | chr7_2:74489711-74489730 | Msa1076080:intron | 15.0% |
| !!! | TTATATTTTATTTTGGATTC+TGG | + | chr7_2:74489718-74489737 | Msa1076080:intron | 15.0% |
| !!! | TTGAATTTTACTGTATAAAT+GGG | + | chr7_2:74490496-74490515 | Msa1076080:intron | 15.0% |
| !!! | AGAATATCTTTAAGATAAAA+GGG | - | chr7_2:74490563-74490582 | None:intergenic | 15.0% |
| !!! | TAGAATATCTTTAAGATAAA+AGG | - | chr7_2:74490564-74490583 | None:intergenic | 15.0% |
| !! | TATTTGAATATCTGTAATAT+AGG | + | chr7_2:74490582-74490601 | Msa1076080:intron | 15.0% |
| !! | AAAATAAATTAACTATCTCT+TGG | - | chr7_2:74491331-74491350 | None:intergenic | 15.0% |
| !! | ATAATGATAAGGATTTGAAA+AGG | + | chr7_2:74487887-74487906 | Msa1076080:CDS | 20.0% |
| !! | TAATTGGATAGTTAATCTTA+GGG | + | chr7_2:74488276-74488295 | Msa1076080:intron | 20.0% |
| !!! | TTATATTTTTGTTGGAAATG+CGG | + | chr7_2:74488559-74488578 | Msa1076080:intron | 20.0% |
| !!! | AATGTAATAGTATTTTCACA+TGG | + | chr7_2:74488650-74488669 | Msa1076080:intron | 20.0% |
| !!! | TTATGCAAATTATTAAGTTG+CGG | - | chr7_2:74489668-74489687 | None:intergenic | 20.0% |
| !! | AAATATGATTGAAGTTGTAA+AGG | + | chr7_2:74490032-74490051 | Msa1076080:intron | 20.0% |
| !! | CAAAGAATTCAATAATAACA+AGG | - | chr7_2:74490295-74490314 | None:intergenic | 20.0% |
| !!! | CTTGTTATTATTGAATTCTT+TGG | + | chr7_2:74490293-74490312 | Msa1076080:intron | 20.0% |
| !!! | GTTGAATTTTACTGTATAAA+TGG | + | chr7_2:74490495-74490514 | Msa1076080:intron | 20.0% |
| !! | TCTAATTAATAAAATGGATG+TGG | + | chr7_2:74490892-74490911 | Msa1076080:intron | 20.0% |
| !!! | CATATGATAATGTCAATTAA+GGG | - | chr7_2:74491354-74491373 | None:intergenic | 20.0% |
| !!! | TCATATGATAATGTCAATTA+AGG | - | chr7_2:74491355-74491374 | None:intergenic | 20.0% |
| !! | CTATACTATAAACTAATACT+AGG | - | chr7_2:74491477-74491496 | None:intergenic | 20.0% |
| !!! | GTTTAAGTTTTGTAGGAAAA+AGG | + | chr7_2:74488086-74488105 | Msa1076080:CDS | 25.0% |
| !!! | GTATTTGGTGTTAGTTTAAT+AGG | + | chr7_2:74488205-74488224 | Msa1076080:intron | 25.0% |
| ! | CTAATTGGATAGTTAATCTT+AGG | + | chr7_2:74488275-74488294 | Msa1076080:intron | 25.0% |
| ! | AAAACAAATTGAATTAGGAG+TGG | + | chr7_2:74488343-74488362 | Msa1076080:intron | 25.0% |
| !! | ATCTTCTGTCATTATGTTTT+CGG | + | chr7_2:74488376-74488395 | Msa1076080:intron | 25.0% |
| ! | TACAATATTCTTGTGTATCT+AGG | - | chr7_2:74488420-74488439 | None:intergenic | 25.0% |
| !!! | CTATATTTTAAGGTGAGTTT+TGG | + | chr7_2:74488444-74488463 | Msa1076080:intron | 25.0% |
| ! | AATTATGGTAGGATATGTTA+AGG | + | chr7_2:74488477-74488496 | Msa1076080:intron | 25.0% |
| !!! | TATATTTTTGTTGGAAATGC+GGG | + | chr7_2:74488560-74488579 | Msa1076080:intron | 25.0% |
| ! | AAACAATTTGTAAACATGTC+CGG | - | chr7_2:74488829-74488848 | None:intergenic | 25.0% |
| ! | TTAATATACAATCAGGACTT+AGG | + | chr7_2:74488847-74488866 | Msa1076080:intron | 25.0% |
| ! | CAAATCATATGTTTCAAATG+TGG | - | chr7_2:74488891-74488910 | None:intergenic | 25.0% |
| !! | CACATTTGAAACATATGATT+TGG | + | chr7_2:74488889-74488908 | Msa1076080:intron | 25.0% |
| ! | AATACAAAGAACAACTAACA+AGG | - | chr7_2:74488997-74489016 | None:intergenic | 25.0% |
| ! | CTTTGTATTATATGTCTTAG+AGG | + | chr7_2:74489008-74489027 | Msa1076080:intron | 25.0% |
| ! | TTCTCTTATATTGTTTCATG+AGG | - | chr7_2:74489075-74489094 | None:intergenic | 25.0% |
| ! | AAATATCCAATCTATAGTGT+AGG | - | chr7_2:74489215-74489234 | None:intergenic | 25.0% |
| ! | ATCCACTTTATTCATGTAAA+CGG | + | chr7_2:74489366-74489385 | Msa1076080:intron | 25.0% |
| !!! | GTACTTTTTGTTTGAAAGAT+GGG | + | chr7_2:74489740-74489759 | Msa1076080:intron | 25.0% |
| ! | AAACTTTAGTGAATTTGATG+TGG | + | chr7_2:74489766-74489785 | Msa1076080:intron | 25.0% |
| ! | AGATTTAGAGATTAATGAGT+TGG | + | chr7_2:74489890-74489909 | Msa1076080:intron | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | - | chr7_2:74489918-74489937 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr7_2:74489922-74489941 | Msa1076080:intron | 25.0% |
| !! | TATTTGTGTAGATCTTTTCA+CGG | - | chr7_2:74491090-74491109 | None:intergenic | 25.0% |
| !! | GAAATTTTACTTGAGATATG+GGG | - | chr7_2:74491640-74491659 | None:intergenic | 25.0% |
| !! | GGAAATTTTACTTGAGATAT+GGG | - | chr7_2:74491641-74491660 | None:intergenic | 25.0% |
| !! | TGGAAATTTTACTTGAGATA+TGG | - | chr7_2:74491642-74491661 | None:intergenic | 25.0% |
| !!! | GTTTTTGGATTTGTTTCTGT+TGG | - | chr7_2:74487378-74487397 | None:intergenic | 30.0% |
| TAAGGATTTGAAAAGGATGA+AGG | + | chr7_2:74487894-74487913 | Msa1076080:CDS | 30.0% | |
| TTCCTACAAAACTTAAACAG+CGG | - | chr7_2:74488084-74488103 | None:intergenic | 30.0% | |
| !!! | AGGTGAGTTTTATTCTGTTT+AGG | + | chr7_2:74488106-74488125 | Msa1076080:intron | 30.0% |
| GAATGTGATTGGAAACTAAT+TGG | + | chr7_2:74488260-74488279 | Msa1076080:intron | 30.0% | |
| !!! | TTTTAAGGTGAGTTTTGGAA+AGG | + | chr7_2:74488449-74488468 | Msa1076080:intron | 30.0% |
| !! | TCTGTTTGAACATGTTTTGA+AGG | + | chr7_2:74488602-74488621 | Msa1076080:intron | 30.0% |
| !! | CTGTTTGAACATGTTTTGAA+GGG | + | chr7_2:74488603-74488622 | Msa1076080:intron | 30.0% |
| ! | GAAACATATGATTTGGATGT+TGG | + | chr7_2:74488896-74488915 | Msa1076080:intron | 30.0% |
| GGGAGAGTTTCTTTAAATTT+AGG | - | chr7_2:74489101-74489120 | None:intergenic | 30.0% | |
| ! | CTTTTTCCTACACTATAGAT+TGG | + | chr7_2:74489206-74489225 | Msa1076080:intron | 30.0% |
| TTATCCATGCAAAGAGTAAA+CGG | + | chr7_2:74489280-74489299 | Msa1076080:intron | 30.0% | |
| GAGGTTTACATGGATAAAAT+TGG | - | chr7_2:74489346-74489365 | None:intergenic | 30.0% | |
| TTACATGAATAAAGTGGATG+AGG | - | chr7_2:74489365-74489384 | None:intergenic | 30.0% | |
| TGAGGTTTACATGAATAAAG+TGG | - | chr7_2:74489371-74489390 | None:intergenic | 30.0% | |
| TTACATGAATAAAGTGGATG+AGG | - | chr7_2:74489365-74489384 | None:intergenic | 30.0% | |
| !! | TTGGTTCTAAAAATATCCAG+TGG | - | chr7_2:74489473-74489492 | None:intergenic | 30.0% |
| ATCAGAGTACAGTACAAAAT+TGG | - | chr7_2:74489492-74489511 | None:intergenic | 30.0% | |
| ! | ATTATTAAGTTGCGGTAACA+AGG | - | chr7_2:74489660-74489679 | None:intergenic | 30.0% |
| !! | GGTACTTTTTGTTTGAAAGA+TGG | + | chr7_2:74489739-74489758 | Msa1076080:intron | 30.0% |
| ! | TAATGAGTTGGATCCAAATA+TGG | + | chr7_2:74489902-74489921 | Msa1076080:intron | 30.0% |
| ! | TTTGCTATAAATTCCGTAGT+TGG | + | chr7_2:74490059-74490078 | Msa1076080:intron | 30.0% |
| TACATTCATGATTCCAACTA+CGG | - | chr7_2:74490075-74490094 | None:intergenic | 30.0% | |
| ! | ATTTTACACACCAATTCACA+AGG | - | chr7_2:74490105-74490124 | None:intergenic | 30.0% |
| CTACATCTCACTTTAGATTT+GGG | - | chr7_2:74490155-74490174 | None:intergenic | 30.0% | |
| TCTACATCTCACTTTAGATT+TGG | - | chr7_2:74490156-74490175 | None:intergenic | 30.0% | |
| ATCAAGCAATTCAGTGATAT+GGG | + | chr7_2:74490225-74490244 | Msa1076080:intron | 30.0% | |
| !!! | TTGTTCTTTTGTTTTGACTC+AGG | + | chr7_2:74490448-74490467 | Msa1076080:intron | 30.0% |
| !!! | TGTTTTGACTCAGGAAATTT+AGG | + | chr7_2:74490457-74490476 | Msa1076080:intron | 30.0% |
| ! | TTATTTGAGATCCTATGTCA+TGG | + | chr7_2:74490760-74490779 | Msa1076080:intron | 30.0% |
| ! | TATTTGAGATCCTATGTCAT+GGG | + | chr7_2:74490761-74490780 | Msa1076080:intron | 30.0% |
| ! | ATTTGTGTAGATCTTTTCAC+GGG | - | chr7_2:74491089-74491108 | None:intergenic | 30.0% |
| ! | TTAAACTCAACTGCTTTAGA+TGG | - | chr7_2:74491208-74491227 | None:intergenic | 30.0% |
| AGTTTAACAGTTTGGCAAAT+GGG | + | chr7_2:74491221-74491240 | Msa1076080:CDS | 30.0% | |
| GTTTATAGTATAGTCAGTTC+AGG | + | chr7_2:74491484-74491503 | Msa1076080:three_prime_UTR | 30.0% | |
| GATACAAGACCTAAAAATGA+AGG | - | chr7_2:74491536-74491555 | None:intergenic | 30.0% | |
| TAGAACTGTAAAGAAGATTC+AGG | - | chr7_2:74491558-74491577 | None:intergenic | 30.0% | |
| !! | GGAAAAGGTTTTTGAGGATT+TGG | - | chr7_2:74487214-74487233 | None:intergenic | 35.0% |
| !! | GATTTGTTTCTGTTGGATCT+CGG | - | chr7_2:74487371-74487390 | None:intergenic | 35.0% |
| !!! | TGAGTTGCGTTTTTTGGATT+TGG | - | chr7_2:74487431-74487450 | None:intergenic | 35.0% |
| AAACAACCTGTGACGTTATT+CGG | + | chr7_2:74487613-74487632 | Msa1076080:CDS | 35.0% | |
| CTTAAATACGTTCTCAAAGC+TGG | + | chr7_2:74487664-74487683 | Msa1076080:CDS | 35.0% | |
| TGAAGTGGATAGTGATATGA+CGG | + | chr7_2:74487693-74487712 | Msa1076080:CDS | 35.0% | |
| TGATTTCTTGCGTGATATTG+CGG | + | chr7_2:74487729-74487748 | Msa1076080:CDS | 35.0% | |
| GATGATGATTTGAGTGATTG+TGG | + | chr7_2:74487847-74487866 | Msa1076080:CDS | 35.0% | |
| ! | TAGTGGTGGTGATAATGATA+AGG | + | chr7_2:74487876-74487895 | Msa1076080:CDS | 35.0% |
| TTAAGAAGCTGTTGAATGAG+TGG | + | chr7_2:74487962-74487981 | Msa1076080:CDS | 35.0% | |
| TCCTACAAAACTTAAACAGC+GGG | - | chr7_2:74488083-74488102 | None:intergenic | 35.0% | |
| !! | CATTTAGCAAACCACTTTTC+TGG | + | chr7_2:74488183-74488202 | Msa1076080:intron | 35.0% |
| !! | CAAACCACTTTTCTGGTATT+TGG | + | chr7_2:74488190-74488209 | Msa1076080:intron | 35.0% |
| AACACCAAATACCAGAAAAG+TGG | - | chr7_2:74488197-74488216 | None:intergenic | 35.0% | |
| TAGGAAAACTTACATGCTAG+TGG | + | chr7_2:74488224-74488243 | Msa1076080:intron | 35.0% | |
| TGCATCAGTTAGAATGTGAT+TGG | + | chr7_2:74488249-74488268 | Msa1076080:intron | 35.0% | |
| TTGTTAACTGTTTGCCGAAA+TGG | + | chr7_2:74488304-74488323 | Msa1076080:intron | 35.0% | |
| TGTTAACTGTTTGCCGAAAT+GGG | + | chr7_2:74488305-74488324 | Msa1076080:intron | 35.0% | |
| ACTTCACTATGTTCCCATTT+CGG | - | chr7_2:74488321-74488340 | None:intergenic | 35.0% | |
| ACAAATTGAATTAGGAGTGG+TGG | + | chr7_2:74488346-74488365 | Msa1076080:intron | 35.0% | |
| CAAATTGAATTAGGAGTGGT+GGG | + | chr7_2:74488347-74488366 | Msa1076080:intron | 35.0% | |
| ! | TTCTGTCATTATGTTTTCGG+AGG | + | chr7_2:74488379-74488398 | Msa1076080:intron | 35.0% |
| ! | TTTTCGGAGGACTTTTTGTA+TGG | + | chr7_2:74488392-74488411 | Msa1076080:intron | 35.0% |
| TTTGGAAAGGTGGTGAATTA+TGG | + | chr7_2:74488462-74488481 | Msa1076080:intron | 35.0% | |
| ! | TATTTTCACATGGAGAGTGA+AGG | + | chr7_2:74488660-74488679 | Msa1076080:intron | 35.0% |
| ! | TTTTACCTTGCATTTGTGAG+AGG | + | chr7_2:74488719-74488738 | Msa1076080:intron | 35.0% |
| ATATACAATCAGGACTTAGG+AGG | + | chr7_2:74488850-74488869 | Msa1076080:intron | 35.0% | |
| ! | TTTTACACAGCAGAACTTCT+TGG | - | chr7_2:74489043-74489062 | None:intergenic | 35.0% |
| AAGAAGTTCTGCTGTGTAAA+AGG | + | chr7_2:74489042-74489061 | Msa1076080:intron | 35.0% | |
| !! | AAGGTGGATGAGGTTTTAAT+GGG | - | chr7_2:74489121-74489140 | None:intergenic | 35.0% |
| !! | TAAGGTGGATGAGGTTTTAA+TGG | - | chr7_2:74489122-74489141 | None:intergenic | 35.0% |
| ATCCACCTTATCCTTGTAAA+CGG | + | chr7_2:74489132-74489151 | Msa1076080:intron | 35.0% | |
| ATCAGAGTACAGTACAACAT+TGG | - | chr7_2:74489244-74489263 | None:intergenic | 35.0% | |
| TTGTACTGTACTCTGATTCA+TGG | + | chr7_2:74489247-74489266 | Msa1076080:intron | 35.0% | |
| TAAAGTGGATGAGGTTTACA+TGG | - | chr7_2:74489356-74489375 | None:intergenic | 35.0% | |
| CACCGTTTACATGAATAAAG+TGG | - | chr7_2:74489395-74489414 | None:intergenic | 35.0% | |
| TGCTGTACAGACTACATTAT+TGG | - | chr7_2:74489433-74489452 | None:intergenic | 35.0% | |
| TTGTACTGTACTCTGATTCA+TGG | + | chr7_2:74489247-74489266 | Msa1076080:intron | 35.0% | |
| !! | AAGCCTTATTTCACTAAGTG+GGG | - | chr7_2:74489971-74489990 | None:intergenic | 35.0% |
| !! | CAAGCCTTATTTCACTAAGT+GGG | - | chr7_2:74489972-74489991 | None:intergenic | 35.0% |
| ! | TCTAAAGTGAGATGTAGAAC+TGG | + | chr7_2:74490158-74490177 | Msa1076080:intron | 35.0% |
| CTAAAGTGAGATGTAGAACT+GGG | + | chr7_2:74490159-74490178 | Msa1076080:intron | 35.0% | |
| GATCAAGCAATTCAGTGATA+TGG | + | chr7_2:74490224-74490243 | Msa1076080:intron | 35.0% | |
| TGTCTATATGCACGTATTGT+TGG | + | chr7_2:74490319-74490338 | Msa1076080:intron | 35.0% | |
| GTCTATATGCACGTATTGTT+GGG | + | chr7_2:74490320-74490339 | Msa1076080:intron | 35.0% | |
| ! | TCTGCATTTCACGCATATTT+TGG | + | chr7_2:74490371-74490390 | Msa1076080:intron | 35.0% |
| !! | ACGCATATTTTGGAGAATAC+AGG | + | chr7_2:74490381-74490400 | Msa1076080:intron | 35.0% |
| !! | AGGTTTTAACCTTGTTAGAG+TGG | + | chr7_2:74490401-74490420 | Msa1076080:intron | 35.0% |
| AGTCTTTAAACACTCCAAGA+GGG | - | chr7_2:74490427-74490446 | None:intergenic | 35.0% | |
| TAGTCTTTAAACACTCCAAG+AGG | - | chr7_2:74490428-74490447 | None:intergenic | 35.0% | |
| GTATAAATGGGAACTCTTGA+AGG | + | chr7_2:74490508-74490527 | Msa1076080:intron | 35.0% | |
| ! | GAACTCTTGAAGGATTTTAC+TGG | + | chr7_2:74490518-74490537 | Msa1076080:intron | 35.0% |
| ! | TTGAAGGATTTTACTGGACT+TGG | + | chr7_2:74490524-74490543 | Msa1076080:intron | 35.0% |
| ! | TGAAGGATTTTACTGGACTT+GGG | + | chr7_2:74490525-74490544 | Msa1076080:intron | 35.0% |
| !! | CGCTAAATATCAATTTGCTG+CGG | - | chr7_2:74490611-74490630 | None:intergenic | 35.0% |
| GCGAGTATTTGTACTTTGTT+TGG | + | chr7_2:74490628-74490647 | Msa1076080:intron | 35.0% | |
| CAACGCAATACTAAGACAAA+TGG | - | chr7_2:74490693-74490712 | None:intergenic | 35.0% | |
| GATCTCAAATAACCAGCTAA+GGG | - | chr7_2:74490752-74490771 | None:intergenic | 35.0% | |
| AGTACTTACAATCAGTGAAG+AGG | + | chr7_2:74491146-74491165 | Msa1076080:CDS | 35.0% | |
| ! | GGTTAATGACATTTTGCCAA+CGG | + | chr7_2:74491167-74491186 | Msa1076080:CDS | 35.0% |
| AGCAGTTGAGTTTAACAGTT+TGG | + | chr7_2:74491213-74491232 | Msa1076080:CDS | 35.0% | |
| GAGTTTAACAGTTTGGCAAA+TGG | + | chr7_2:74491220-74491239 | Msa1076080:CDS | 35.0% | |
| TTAGCAGAAGAGAGATTTAG+TGG | + | chr7_2:74491262-74491281 | Msa1076080:CDS | 35.0% | |
| TAGCAGAAGAGAGATTTAGT+GGG | + | chr7_2:74491263-74491282 | Msa1076080:CDS | 35.0% | |
| AATTAACTATCTCTTGGAGC+AGG | - | chr7_2:74491325-74491344 | None:intergenic | 35.0% | |
| ATTTCTCCTCATACATTGCA+CGG | - | chr7_2:74491403-74491422 | None:intergenic | 35.0% | |
| !! | CTACAATGGCCTTCATTTTT+AGG | + | chr7_2:74491524-74491543 | Msa1076080:three_prime_UTR | 35.0% |
| ! | CTGATCGGAAAAGGTTTTTG+AGG | - | chr7_2:74487220-74487239 | None:intergenic | 40.0% |
| TTCAGTGTTCTGATCGGAAA+AGG | - | chr7_2:74487229-74487248 | None:intergenic | 40.0% | |
| ! | GGTTTGTTCAGTGTTCTGAT+CGG | - | chr7_2:74487235-74487254 | None:intergenic | 40.0% |
| !! | TGCTTTAGAAGGTCCATCTA+GGG | - | chr7_2:74487283-74487302 | None:intergenic | 40.0% |
| !! | TTGCTTTAGAAGGTCCATCT+AGG | - | chr7_2:74487284-74487303 | None:intergenic | 40.0% |
| ! | TGAGAAGCTCTTGCTTTAGA+AGG | - | chr7_2:74487294-74487313 | None:intergenic | 40.0% |
| TTTGAAGAATTTCTTGCCGC+CGG | - | chr7_2:74487344-74487363 | None:intergenic | 40.0% | |
| ! | TTTCTTCTTCGCGGAGTTTT+TGG | - | chr7_2:74487393-74487412 | None:intergenic | 40.0% |
| !! | GTTGGTTGATGAGGTAGTTA+CGG | - | chr7_2:74487476-74487495 | None:intergenic | 40.0% |
| !! | TGTCTATGTTTTGTTCGTCG+GGG | - | chr7_2:74487546-74487565 | None:intergenic | 40.0% |
| !! | CTGTCTATGTTTTGTTCGTC+GGG | - | chr7_2:74487547-74487566 | None:intergenic | 40.0% |
| !! | GCTGTCTATGTTTTGTTCGT+CGG | - | chr7_2:74487548-74487567 | None:intergenic | 40.0% |
| ! | GGATGACTTCTTGTTTAGGA+AGG | - | chr7_2:74487576-74487595 | None:intergenic | 40.0% |
| TCACAGGTTGTTTGAGAAAC+CGG | - | chr7_2:74487606-74487625 | None:intergenic | 40.0% | |
| CAAAGCTGGATTGTTTGAAG+TGG | + | chr7_2:74487678-74487697 | Msa1076080:CDS | 40.0% | |
| !! | GGATTTTGAGTGATAGGAAG+CGG | + | chr7_2:74487776-74487795 | Msa1076080:CDS | 40.0% |
| GATGATTTGAGTGATTGTGG+TGG | + | chr7_2:74487850-74487869 | Msa1076080:CDS | 40.0% | |
| ! | GTGTGATGAGGACAAGATTT+TGG | + | chr7_2:74487933-74487952 | Msa1076080:CDS | 40.0% |
| !! | ACCCGCTGTTTAAGTTTTGT+AGG | + | chr7_2:74488079-74488098 | Msa1076080:CDS | 40.0% |
| !!! | TAAGGTGAGTTTTGGAAAGG+TGG | + | chr7_2:74488452-74488471 | Msa1076080:intron | 40.0% |
| GAAAGGTGGTGAATTATGGT+AGG | + | chr7_2:74488466-74488485 | Msa1076080:intron | 40.0% | |
| ATCAACCTCTCACAAATGCA+AGG | - | chr7_2:74488727-74488746 | None:intergenic | 40.0% | |
| !! | AAGGTCACAAGTTTGAGTTG+TGG | - | chr7_2:74488751-74488770 | None:intergenic | 40.0% |
| GTTGAAGCAACAATTGGAGT+TGG | - | chr7_2:74488788-74488807 | None:intergenic | 40.0% | |
| !! | TTTTATCCCCTCTGCTTTTG+TGG | + | chr7_2:74488921-74488940 | Msa1076080:intron | 40.0% |
| AATCACACCACAAAAGCAGA+GGG | - | chr7_2:74488931-74488950 | None:intergenic | 40.0% | |
| TCATAGTCGTTCCTTTCTAG+TGG | + | chr7_2:74488961-74488980 | Msa1076080:intron | 40.0% | |
| TTACAAGGATAAGGTGGATG+AGG | - | chr7_2:74489131-74489150 | None:intergenic | 40.0% | |
| TCAAACTGGTAGCACCAATA+AGG | + | chr7_2:74489158-74489177 | Msa1076080:intron | 40.0% | |
| TGCTGTGCAGACTACATTAT+TGG | - | chr7_2:74489323-74489342 | None:intergenic | 40.0% | |
| ! | AAACTAGAGACGTTTTCCAC+TGG | + | chr7_2:74489454-74489473 | Msa1076080:intron | 40.0% |
| CTGCACTTGAATCTCAATCA+AGG | - | chr7_2:74489563-74489582 | None:intergenic | 40.0% | |
| !! | AATGCTTAGCTTTGTAGCAG+TGG | + | chr7_2:74489608-74489627 | Msa1076080:intron | 40.0% |
| !! | ATGCTTAGCTTTGTAGCAGT+GGG | + | chr7_2:74489609-74489628 | Msa1076080:intron | 40.0% |
| CTTATTTCACTAAGTGGGGT+CGG | - | chr7_2:74489967-74489986 | None:intergenic | 40.0% | |
| !! | CCAAGCCTTATTTCACTAAG+TGG | - | chr7_2:74489973-74489992 | None:intergenic | 40.0% |
| CCACTTAGTGAAATAAGGCT+TGG | + | chr7_2:74489970-74489989 | Msa1076080:intron | 40.0% | |
| ! | GTATTCTCAGCCTTGTGAAT+TGG | + | chr7_2:74490092-74490111 | Msa1076080:intron | 40.0% |
| AAGAACCTATTACACAAGCC+CGG | - | chr7_2:74490670-74490689 | None:intergenic | 40.0% | |
| GGATCTCAAATAACCAGCTA+AGG | - | chr7_2:74490753-74490772 | None:intergenic | 40.0% | |
| GATATGAAATGTGTCAGTGC+TGG | + | chr7_2:74490846-74490865 | Msa1076080:intron | 40.0% | |
| AGGTTCTTCAGGATGACATT+CGG | + | chr7_2:74490927-74490946 | Msa1076080:intron | 40.0% | |
| CTGCAATGGACCATTATATC+AGG | + | chr7_2:74490999-74491018 | Msa1076080:CDS | 40.0% | |
| AATGGACCATTATATCAGGC+TGG | + | chr7_2:74491003-74491022 | Msa1076080:CDS | 40.0% | |
| ! | CATTATATCAGGCTGGCTAT+CGG | + | chr7_2:74491010-74491029 | Msa1076080:CDS | 40.0% |
| ! | ATTATATCAGGCTGGCTATC+GGG | + | chr7_2:74491011-74491030 | Msa1076080:CDS | 40.0% |
| ! | GGTTGGTATTCACGAAAGAT+CGG | + | chr7_2:74491063-74491082 | Msa1076080:CDS | 40.0% |
| AGCAGAAGAGAGATTTAGTG+GGG | + | chr7_2:74491264-74491283 | Msa1076080:CDS | 40.0% | |
| ATTGCACGGATTCTCAATAC+TGG | - | chr7_2:74491389-74491408 | None:intergenic | 40.0% | |
| AGCGAAACTTAAAACCAAGG+GGG | - | chr7_2:74491454-74491473 | None:intergenic | 40.0% | |
| GAGCGAAACTTAAAACCAAG+GGG | - | chr7_2:74491455-74491474 | None:intergenic | 40.0% | |
| GGAGCGAAACTTAAAACCAA+GGG | - | chr7_2:74491456-74491475 | None:intergenic | 40.0% | |
| AGGAGCGAAACTTAAAACCA+AGG | - | chr7_2:74491457-74491476 | None:intergenic | 40.0% | |
| AGTTTCGGTAAGCACTACAA+TGG | + | chr7_2:74491510-74491529 | Msa1076080:three_prime_UTR | 40.0% | |
| ATGGGGTAACAAGACCAAAT+GGG | - | chr7_2:74491623-74491642 | None:intergenic | 40.0% | |
| TATGGGGTAACAAGACCAAA+TGG | - | chr7_2:74491624-74491643 | None:intergenic | 40.0% | |
| ! | AGAAGGTCCATCTAGGGTTT+CGG | - | chr7_2:74487277-74487296 | None:intergenic | 45.0% |
| ! | GTTCGCGTTTTTCTTCTTCG+CGG | - | chr7_2:74487402-74487421 | None:intergenic | 45.0% |
| !!! | GGTGGTTGAGTTGCGTTTTT+TGG | - | chr7_2:74487437-74487456 | None:intergenic | 45.0% |
| !! | TATGTTTTGTTCGTCGGGGA+GGG | - | chr7_2:74487542-74487561 | None:intergenic | 45.0% |
| ! | CTTCTTGTTTAGGAAGGACG+AGG | - | chr7_2:74487570-74487589 | None:intergenic | 45.0% |
| GTTGTTTGAGAAACCGGAGA+CGG | - | chr7_2:74487600-74487619 | None:intergenic | 45.0% | |
| ! | GTGGATAGTGATATGACGGA+AGG | + | chr7_2:74487697-74487716 | Msa1076080:CDS | 45.0% |
| ATATTGCGGAGTTGAGGAAG+AGG | + | chr7_2:74487743-74487762 | Msa1076080:CDS | 45.0% | |
| !! | AGACGGGGATTTTGAGTGAT+AGG | + | chr7_2:74487770-74487789 | Msa1076080:CDS | 45.0% |
| !! | AGTGATTGTGGTGGATCTAG+TGG | + | chr7_2:74487859-74487878 | Msa1076080:CDS | 45.0% |
| TTTCGATGAGCTGTGTGATG+AGG | + | chr7_2:74487921-74487940 | Msa1076080:CDS | 45.0% | |
| GCTGTTGAATGAGTGGAAAC+AGG | + | chr7_2:74487969-74487988 | Msa1076080:CDS | 45.0% | |
| TCACATGGAGAGTGAAGGAA+AGG | + | chr7_2:74488665-74488684 | Msa1076080:intron | 45.0% | |
| !!! | GTTGGTTTTGTGCGACTAGA+AGG | - | chr7_2:74488770-74488789 | None:intergenic | 45.0% |
| ! | TCCAATTGTTGCTTCAACGC+TGG | + | chr7_2:74488790-74488809 | Msa1076080:intron | 45.0% |
| ! | TCCAGCGTTGAAGCAACAAT+TGG | - | chr7_2:74488794-74488813 | None:intergenic | 45.0% |
| ! | AATCAGGACTTAGGAGGCAT+TGG | + | chr7_2:74488856-74488875 | Msa1076080:intron | 45.0% |
| ATCACACCACAAAAGCAGAG+GGG | - | chr7_2:74488930-74488949 | None:intergenic | 45.0% | |
| GAATCACACCACAAAAGCAG+AGG | - | chr7_2:74488932-74488951 | None:intergenic | 45.0% | |
| ! | TAGTCGTTCCTTTCTAGTGG+AGG | + | chr7_2:74488964-74488983 | Msa1076080:intron | 45.0% |
| GCTCAAATCCTCCACTAGAA+AGG | - | chr7_2:74488975-74488994 | None:intergenic | 45.0% | |
| CACCGTTTACAAGGATAAGG+TGG | - | chr7_2:74489137-74489156 | None:intergenic | 45.0% | |
| ! | GAGCACCGTTTACAAGGATA+AGG | - | chr7_2:74489140-74489159 | None:intergenic | 45.0% |
| ! | CAGTTTGAGCACCGTTTACA+AGG | - | chr7_2:74489146-74489165 | None:intergenic | 45.0% |
| CTTGTAAACGGTGCTCAAAC+TGG | + | chr7_2:74489144-74489163 | Msa1076080:intron | 45.0% | |
| TGCTGTGCAGACTACCTTAT+TGG | - | chr7_2:74489175-74489194 | None:intergenic | 45.0% | |
| AGCACCGTTTACTCTTTGCA+TGG | - | chr7_2:74489287-74489306 | None:intergenic | 45.0% | |
| !! | TGCTTAGCTTTGTAGCAGTG+GGG | + | chr7_2:74489610-74489629 | Msa1076080:intron | 45.0% |
| CGACCCCACTTAGTGAAATA+AGG | + | chr7_2:74489965-74489984 | Msa1076080:intron | 45.0% | |
| TGGATGACTCAGTCTATGAC+CGG | + | chr7_2:74490648-74490667 | Msa1076080:intron | 45.0% | |
| TATGACCGGGCTTGTGTAAT+AGG | + | chr7_2:74490662-74490681 | Msa1076080:intron | 45.0% | |
| CTCAAATAACCAGCTAAGGG+AGG | - | chr7_2:74490749-74490768 | None:intergenic | 45.0% | |
| ATGTCTGACACCCATGACAT+AGG | - | chr7_2:74490774-74490793 | None:intergenic | 45.0% | |
| ! | GCATGTACTTCAGGTTCTTC+AGG | + | chr7_2:74490916-74490935 | Msa1076080:intron | 45.0% |
| TGATGGTTGACTGCTGTATG+AGG | + | chr7_2:74490963-74490982 | Msa1076080:CDS | 45.0% | |
| CTGTATGAGGCGAGATTATC+TGG | + | chr7_2:74490976-74490995 | Msa1076080:CDS | 45.0% | |
| CGATAGCCAGCCTGATATAA+TGG | - | chr7_2:74491012-74491031 | None:intergenic | 45.0% | |
| ATAGTAACACCGATAGGCCA+GGG | - | chr7_2:74491043-74491062 | None:intergenic | 45.0% | |
| CCAACCATAGTAACACCGAT+AGG | - | chr7_2:74491049-74491068 | None:intergenic | 45.0% | |
| !! | CCTATCGGTGTTACTATGGT+TGG | + | chr7_2:74491046-74491065 | Msa1076080:CDS | 45.0% |
| ! | ACTGCTTTAGATGGCAGTGT+CGG | - | chr7_2:74491199-74491218 | None:intergenic | 45.0% |
| GCAGAAGAGAGATTTAGTGG+GGG | + | chr7_2:74491265-74491284 | Msa1076080:CDS | 45.0% | |
| GAGAATCCGTGCAATGTATG+AGG | + | chr7_2:74491394-74491413 | Msa1076080:three_prime_UTR | 45.0% | |
| GCGAAACTTAAAACCAAGGG+GGG | - | chr7_2:74491453-74491472 | None:intergenic | 45.0% | |
| TGTTCGATTTCCACCCCATT+TGG | + | chr7_2:74491606-74491625 | Msa1076080:three_prime_UTR | 45.0% | |
| TGGGGTAACAAGACCAAATG+GGG | - | chr7_2:74491622-74491641 | None:intergenic | 45.0% | |
| CAATCCCTAGCCGAAGAAAC+CGG | + | chr7_2:74487322-74487341 | Msa1076080:CDS | 50.0% | |
| !! | TTTCTTGCCGCCGGTTTCTT+CGG | - | chr7_2:74487335-74487354 | None:intergenic | 50.0% |
| TGAGGTAGTTACGGTGGAGA+CGG | - | chr7_2:74487467-74487486 | None:intergenic | 50.0% | |
| !! | GGTTGATGAGGTAGTTACGG+TGG | - | chr7_2:74487473-74487492 | None:intergenic | 50.0% |
| !! | CTATGTTTTGTTCGTCGGGG+AGG | - | chr7_2:74487543-74487562 | None:intergenic | 50.0% |
| ! | CGGCGGATGACTTCTTGTTT+AGG | - | chr7_2:74487580-74487599 | None:intergenic | 50.0% |
| TCTTCGCCGAATAACGTCAC+AGG | - | chr7_2:74487622-74487641 | None:intergenic | 50.0% | |
| ACGATGATGCGAGACTCGAT+CGG | + | chr7_2:74487641-74487660 | Msa1076080:CDS | 50.0% | |
| TGCGTGATATTGCGGAGTTG+AGG | + | chr7_2:74487737-74487756 | Msa1076080:CDS | 50.0% | |
| GTTGAGGAAGAGGCAGAAGA+CGG | + | chr7_2:74487753-74487772 | Msa1076080:CDS | 50.0% | |
| TTGAGGAAGAGGCAGAAGAC+GGG | + | chr7_2:74487754-74487773 | Msa1076080:CDS | 50.0% | |
| !! | GATTGTGGTGGATCTAGTGG+TGG | + | chr7_2:74487862-74487881 | Msa1076080:CDS | 50.0% |
| GAAACAGGAGTTGCGTGAGA+TGG | + | chr7_2:74487984-74488003 | Msa1076080:CDS | 50.0% | |
| GACGGCTAAAGGGAAGTCTA+TGG | + | chr7_2:74488023-74488042 | Msa1076080:CDS | 50.0% | |
| GAGATGTAGAACTGGGCAAC+TGG | + | chr7_2:74490166-74490185 | Msa1076080:intron | 50.0% | |
| GGATGACTCAGTCTATGACC+GGG | + | chr7_2:74490649-74490668 | Msa1076080:intron | 50.0% | |
| GCATTCTAACCTCCCTTAGC+TGG | + | chr7_2:74490737-74490756 | Msa1076080:intron | 50.0% | |
| GGATGTGGTGCATGTACTTC+AGG | + | chr7_2:74490907-74490926 | Msa1076080:intron | 50.0% | |
| TCTTCAGGATGACATTCGGC+AGG | + | chr7_2:74490931-74490950 | Msa1076080:CDS | 50.0% | |
| TCGGCAGGCACTAATGTTGA+TGG | + | chr7_2:74490946-74490965 | Msa1076080:CDS | 50.0% | |
| GCGAGATTATCTGGCTGCAA+TGG | + | chr7_2:74490985-74491004 | Msa1076080:CDS | 50.0% | |
| CATAGTAACACCGATAGGCC+AGG | - | chr7_2:74491044-74491063 | None:intergenic | 50.0% | |
| !! | CTGGCCTATCGGTGTTACTA+TGG | + | chr7_2:74491042-74491061 | Msa1076080:CDS | 50.0% |
| ! | CTGCTTTAGATGGCAGTGTC+GGG | - | chr7_2:74491198-74491217 | None:intergenic | 50.0% |
| AGTCAGTTCAGGCGCAGTTT+CGG | + | chr7_2:74491495-74491514 | Msa1076080:three_prime_UTR | 50.0% | |
| GGTAACAAGACCAAATGGGG+TGG | - | chr7_2:74491619-74491638 | None:intergenic | 50.0% | |
| TAGGGTTTCGGACGAAGGTG+CGG | - | chr7_2:74487265-74487284 | None:intergenic | 55.0% | |
| ! | CCATCTAGGGTTTCGGACGA+AGG | - | chr7_2:74487270-74487289 | None:intergenic | 55.0% |
| CCTTCGTCCGAAACCCTAGA+TGG | + | chr7_2:74487267-74487286 | Msa1076080:exon | 55.0% | |
| CGGTTTCTTCGGCTAGGGAT+TGG | - | chr7_2:74487324-74487343 | None:intergenic | 55.0% | |
| AGTTACGGTGGAGACGGTGT+CGG | - | chr7_2:74487461-74487480 | None:intergenic | 55.0% | |
| !! | GGAGGAAGCGTTGGTTGATG+AGG | - | chr7_2:74487485-74487504 | None:intergenic | 55.0% |
| AAGAAGTCATCCGCCGTCTC+CGG | + | chr7_2:74487584-74487603 | Msa1076080:CDS | 55.0% | |
| GTTTGAGAAACCGGAGACGG+CGG | - | chr7_2:74487597-74487616 | None:intergenic | 55.0% | |
| TGAGGAAGAGGCAGAAGACG+GGG | + | chr7_2:74487755-74487774 | Msa1076080:CDS | 55.0% | |
| GAGTGATAGGAAGCGGCAGA+AGG | + | chr7_2:74487783-74487802 | Msa1076080:CDS | 55.0% | |
| TGATAGGAAGCGGCAGAAGG+CGG | + | chr7_2:74487786-74487805 | Msa1076080:CDS | 55.0% | |
| ACAGGAGTTGCGTGAGATGG+CGG | + | chr7_2:74487987-74488006 | Msa1076080:CDS | 55.0% | |
| GTATCGCGCACACTGCTTGA+AGG | - | chr7_2:74488055-74488074 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr7_2:74489959-74489978 | None:intergenic | 55.0% | |
| TGGGCAACTGGCGAACATCT+GGG | + | chr7_2:74490178-74490197 | Msa1076080:intron | 55.0% | |
| CCAAGAGGGCCACTCTAACA+AGG | - | chr7_2:74490413-74490432 | None:intergenic | 55.0% | |
| CCTTGTTAGAGTGGCCCTCT+TGG | + | chr7_2:74490410-74490429 | Msa1076080:intron | 55.0% | |
| GCAATCAGTCGTCTGAGGAG+AGG | + | chr7_2:74491287-74491306 | Msa1076080:CDS | 55.0% | |
| AGTCGTCTGAGGAGAGGCTT+AGG | + | chr7_2:74491293-74491312 | Msa1076080:CDS | 55.0% | |
| ! | TAAAACCAAGGGGGGCGCAA+GGG | - | chr7_2:74491445-74491464 | None:intergenic | 55.0% |
| ! | TTAAAACCAAGGGGGGCGCA+AGG | - | chr7_2:74491446-74491465 | None:intergenic | 55.0% |
| TCCCTAGCCGAAGAAACCGG+CGG | + | chr7_2:74487325-74487344 | Msa1076080:CDS | 60.0% | |
| !! | GGAAGCGCTGGATGAAGCAG+CGG | - | chr7_2:74487521-74487540 | None:intergenic | 60.0% |
| !! | GAGGATGGTGCTGCTGAGGA+TGG | + | chr7_2:74487808-74487827 | Msa1076080:CDS | 60.0% |
| !! | GGTGCTGCTGAGGATGGTGA+TGG | + | chr7_2:74487814-74487833 | Msa1076080:CDS | 60.0% |
| !! | GCTGCTGAGGATGGTGATGG+TGG | + | chr7_2:74487817-74487836 | Msa1076080:CDS | 60.0% |
| !! | GAGGATGGTGATGGTGGTGC+TGG | + | chr7_2:74487823-74487842 | Msa1076080:CDS | 60.0% |
| !! | GTTGCGTGAGATGGCGGAGA+CGG | + | chr7_2:74487993-74488012 | Msa1076080:CDS | 60.0% |
| !! | AGATGGCGGAGACGGAGAAG+CGG | + | chr7_2:74488001-74488020 | Msa1076080:CDS | 60.0% |
| ACGGAGAAGCGGACGGCTAA+AGG | + | chr7_2:74488012-74488031 | Msa1076080:CDS | 60.0% | |
| CGGAGAAGCGGACGGCTAAA+GGG | + | chr7_2:74488013-74488032 | Msa1076080:CDS | 60.0% | |
| CGCTGGAGAGAACTGCAGAC+CGG | + | chr7_2:74488807-74488826 | Msa1076080:intron | 60.0% | |
| CTGGGCAACTGGCGAACATC+TGG | + | chr7_2:74490177-74490196 | Msa1076080:intron | 60.0% | |
| GGGCAACTGGCGAACATCTG+GGG | + | chr7_2:74490179-74490198 | Msa1076080:intron | 60.0% | |
| GGCAACTGGCGAACATCTGG+GGG | + | chr7_2:74490180-74490199 | Msa1076080:intron | 60.0% | |
| TGGCTATCGGGAATGCTCCC+TGG | + | chr7_2:74491023-74491042 | Msa1076080:CDS | 60.0% | |
| GGGAATGCTCCCTGGCCTAT+CGG | + | chr7_2:74491031-74491050 | Msa1076080:CDS | 60.0% | |
| TGGGGGCAATCAGTCGTCTG+AGG | + | chr7_2:74491282-74491301 | Msa1076080:CDS | 60.0% | |
| ! | TTCGGACGAAGGTGCGGTGG+TGG | - | chr7_2:74487259-74487278 | None:intergenic | 65.0% |
| ! | GGTTTCGGACGAAGGTGCGG+TGG | - | chr7_2:74487262-74487281 | None:intergenic | 65.0% |
| !! | GCCGCCGGTTTCTTCGGCTA+GGG | - | chr7_2:74487329-74487348 | None:intergenic | 65.0% |
| !! | TGCCGCCGGTTTCTTCGGCT+AGG | - | chr7_2:74487330-74487349 | None:intergenic | 65.0% |
| ! | TACGGTGGAGACGGTGTCGG+TGG | - | chr7_2:74487458-74487477 | None:intergenic | 65.0% |
| !! | GGTGACGGAGGAGGAAGCGT+TGG | - | chr7_2:74487494-74487513 | None:intergenic | 65.0% |
| TGAAGCAGCGGCGGAGGTGA+CGG | - | chr7_2:74487509-74487528 | None:intergenic | 65.0% | |
| ! | AGCGCTGGATGAAGCAGCGG+CGG | - | chr7_2:74487518-74487537 | None:intergenic | 65.0% |
| TAGGAAGCGGCAGAAGGCGG+AGG | + | chr7_2:74487789-74487808 | Msa1076080:CDS | 65.0% | |
| AAGCGGCAGAAGGCGGAGGA+TGG | + | chr7_2:74487793-74487812 | Msa1076080:CDS | 65.0% | |
| ACTGGCGAACATCTGGGGGC+AGG | + | chr7_2:74490184-74490203 | Msa1076080:intron | 65.0% | |
| CTGGCGAACATCTGGGGGCA+GGG | + | chr7_2:74490185-74490204 | Msa1076080:intron | 65.0% | |
| TGGCGAACATCTGGGGGCAG+GGG | + | chr7_2:74490186-74490205 | Msa1076080:intron | 65.0% | |
| ! | GCAGTGTCGGGTAACGCCGT+TGG | - | chr7_2:74491186-74491205 | None:intergenic | 65.0% |
| ! | GGACGAAGGTGCGGTGGTGG+TGG | - | chr7_2:74487256-74487275 | None:intergenic | 70.0% |
| !! | GGTGGAGACGGTGTCGGTGG+TGG | - | chr7_2:74487455-74487474 | None:intergenic | 70.0% |
| GCTGGATGAAGCAGCGGCGG+AGG | - | chr7_2:74487515-74487534 | None:intergenic | 70.0% | |
| ! | TTCGTCGGGGAGGGAAGCGC+TGG | - | chr7_2:74487533-74487552 | None:intergenic | 70.0% |
| !! | GGCGGAGGATGGTGCTGCTG+AGG | + | chr7_2:74487804-74487823 | Msa1076080:CDS | 70.0% |
| GGCGGAGACGGAGAAGCGGA+CGG | + | chr7_2:74488005-74488024 | Msa1076080:CDS | 70.0% | |
| !! | AGCGGCGGAGGTGACGGAGG+AGG | - | chr7_2:74487503-74487522 | None:intergenic | 75.0% |
| ! | AGCAGCGGCGGAGGTGACGG+AGG | - | chr7_2:74487506-74487525 | None:intergenic | 75.0% |
| TGCAGCCCTTGCGCCCCCCT+TGG | + | chr7_2:74491437-74491456 | Msa1076080:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 74487179 | 74491675 | 74487179 | ID=Msa1076080;Name=Msa1076080 |
| chr7_2 | mRNA | 74487179 | 74491675 | 74487179 | ID=Msa1076080-mRNA-1;Parent=Msa1076080;Name=Msa1076080-mRNA-1;_AED=0.00;_eAED=0.00;_QI=107|1|1|1|1|1|2|333|411 |
| chr7_2 | exon | 74487179 | 74488107 | 74487179 | ID=Msa1076080-mRNA-1:exon:17567;Parent=Msa1076080-mRNA-1 |
| chr7_2 | exon | 74490929 | 74491675 | 74490929 | ID=Msa1076080-mRNA-1:exon:17568;Parent=Msa1076080-mRNA-1 |
| chr7_2 | five_prime_UTR | 74487179 | 74487285 | 74487179 | ID=Msa1076080-mRNA-1:five_prime_utr;Parent=Msa1076080-mRNA-1 |
| chr7_2 | CDS | 74487286 | 74488107 | 74487286 | ID=Msa1076080-mRNA-1:cds;Parent=Msa1076080-mRNA-1 |
| chr7_2 | CDS | 74490929 | 74491342 | 74490929 | ID=Msa1076080-mRNA-1:cds;Parent=Msa1076080-mRNA-1 |
| chr7_2 | three_prime_UTR | 74491343 | 74491675 | 74491343 | ID=Msa1076080-mRNA-1:three_prime_utr;Parent=Msa1076080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
