AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1077170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1077170 MtrunA17_Chr7g0261401 93.525 834 49 2 1 833 1 830 0.0 1605
Msa1077170 MtrunA17_Chr1g0189211 46.066 699 335 9 3 680 20 697 0.0 628
Msa1077170 MtrunA17_Chr2g0303101 44.098 610 319 10 99 706 34 623 5.55e-152 471
Msa1077170 MtrunA17_Chr8g0380981 41.840 576 320 6 99 674 25 585 1.62e-145 456
Msa1077170 MtrunA17_Chr5g0397501 33.176 425 232 9 239 653 301 683 3.48e-55 207
Msa1077170 MtrunA17_Chr5g0397501 45.349 86 41 2 117 202 28 107 4.07e-13 73.6
Msa1077170 MtrunA17_Chr3g0116441 28.744 414 217 8 117 524 18 359 2.82e-37 151
Msa1077170 MtrunA17_Chr5g0410721 28.280 343 227 9 341 675 237 568 3.87e-35 144
Msa1077170 MtrunA17_Chr1g0164731 25.092 546 304 14 113 646 41 493 7.33e-34 138
Msa1077170 MtrunA17_Chr1g0199511 34.946 186 109 2 341 520 295 474 1.22e-27 120
Msa1077170 MtrunA17_Chr1g0164761 31.359 287 173 10 369 646 166 437 9.24e-27 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1077170 AT1G08620.2 44.105 721 366 10 5 703 19 724 0.0 553
Msa1077170 AT1G08620.3 44.105 721 366 10 5 703 33 738 0.0 553
Msa1077170 AT1G08620.4 44.105 721 366 10 5 703 19 724 0.0 553
Msa1077170 AT1G08620.1 44.105 721 366 10 5 703 19 724 0.0 553
Msa1077170 AT2G38950.1 39.481 694 340 15 5 691 19 639 2.11e-151 461
Msa1077170 AT4G20400.1 42.301 565 310 4 99 663 38 586 3.68e-149 463
Msa1077170 AT1G30810.3 41.491 617 326 10 57 669 7 592 4.33e-148 456
Msa1077170 AT1G30810.2 41.491 617 326 10 57 669 7 592 4.33e-148 456
Msa1077170 AT1G30810.1 41.491 617 326 10 57 669 7 592 4.33e-148 456
Msa1077170 AT2G34880.1 41.068 599 311 14 73 662 15 580 2.61e-138 430
Msa1077170 AT4G20400.2 41.558 539 299 4 125 663 7 529 6.47e-137 429
Msa1077170 AT1G63490.2 33.573 417 240 9 239 653 298 679 6.77e-58 216
Msa1077170 AT1G63490.2 43.023 86 43 2 117 202 31 110 2.16e-12 71.6
Msa1077170 AT1G63490.4 33.573 417 240 9 239 653 298 679 7.09e-58 216
Msa1077170 AT1G63490.4 43.023 86 43 2 117 202 31 110 2.24e-12 71.6
Msa1077170 AT1G63490.1 33.573 417 240 9 239 653 45 426 7.52e-58 216
Msa1077170 AT5G46910.2 28.419 563 295 21 112 666 98 560 2.01e-42 165
Msa1077170 AT5G46910.1 30.909 385 222 14 289 666 213 560 4.17e-35 144
Msa1077170 AT5G04240.1 36.464 181 113 2 341 520 263 442 3.74e-30 129
Msa1077170 AT1G63490.3 33.040 227 139 4 427 653 7 220 8.24e-29 124
Msa1077170 AT3G48430.1 37.569 181 109 2 342 520 205 383 4.23e-28 122

Find 239 sgRNAs with CRISPR-Local

Find 449 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAAACAATTACTGCATTT+TGG 0.161845 7_2:+75725737 None:intergenic
GAAAATTTCTGTGCAGCTTC+AGG 0.197788 7_2:+75724567 None:intergenic
AACTAAGTGCAGTCTATAAA+TGG 0.202723 7_2:-75722385 Msa1077170:CDS
TGTTTCTCCACCAAAGAATT+TGG 0.204908 7_2:+75722200 None:intergenic
ATGTTAGAAACAATTTATTT+TGG 0.207841 7_2:-75721648 Msa1077170:three_prime_UTR
TAAGGATAAGAATAAGATTA+TGG 0.215631 7_2:-75724961 Msa1077170:CDS
ACTTCACTGCCAGTTGTAAA+AGG 0.230547 7_2:-75722589 Msa1077170:CDS
TTGTTTCTAACATGCATATT+AGG 0.230884 7_2:+75721658 None:intergenic
AAAAGTACTTCAACTAATAA+TGG 0.231367 7_2:-75725086 Msa1077170:CDS
GGAACACTTGCCGCGATTTC+CGG 0.234969 7_2:+75727948 None:intergenic
GAAGAAACTTCAGAAACTTT+TGG 0.238244 7_2:+75721930 None:intergenic
CTTCCAAAAGGGACCAAATA+TGG 0.238729 7_2:-75725764 Msa1077170:CDS
CTGTTGACTTTGAAACAATT+TGG 0.245122 7_2:-75724309 Msa1077170:CDS
CTCATTATATTACATGCATT+TGG 0.245461 7_2:-75724371 Msa1077170:CDS
GAGTTTGTTCTTGTCTTTCC+TGG 0.259269 7_2:-75723234 Msa1077170:CDS
CATCCATATTTGGTCCCTTT+TGG 0.264250 7_2:+75725761 None:intergenic
CCTCTTGAGTGGTTGCTTCA+TGG 0.276894 7_2:-75723153 Msa1077170:CDS
AATGCTTGTTGCAGCAGATT+TGG 0.282959 7_2:+75722037 None:intergenic
GCATCCTCCTATGACTAAAT+TGG 0.292585 7_2:-75726948 Msa1077170:intron
CAAGATCCCATTTCTTTGAT+AGG 0.293387 7_2:+75722975 None:intergenic
TCTTCTGTTGGACGGAAAAT+AGG 0.293809 7_2:+75725575 None:intergenic
TCCCCAATTGCCTTGCTATC+AGG 0.296863 7_2:+75721984 None:intergenic
CTGTGAGCCAATTGTATTCC+AGG 0.303055 7_2:-75721575 Msa1077170:three_prime_UTR
AAAATTACCAATTTAGTCAT+AGG 0.309535 7_2:+75726941 None:intergenic
AGTTAAACCAAGATCTTCTT+TGG 0.311186 7_2:+75722361 None:intergenic
TTTGATTTCTGGGAGGCAAC+TGG 0.312468 7_2:+75722332 None:intergenic
TATCCTGAATATTTAAAATC+TGG 0.314812 7_2:-75724645 Msa1077170:CDS
GGATGCAAGAAGAGAAGTTC+TGG 0.317535 7_2:-75725606 Msa1077170:CDS
TTCATACGACAAGCTGTTAC+TGG 0.325874 7_2:-75723082 Msa1077170:CDS
ATGCTTGTTGCAGCAGATTT+GGG 0.334186 7_2:+75722038 None:intergenic
ACCAGATTATCATGCATATC+TGG 0.335186 7_2:+75724244 None:intergenic
TTTCCTGGAACATATCATTC+AGG 0.336680 7_2:-75723219 Msa1077170:CDS
CTTTACTACAAGAGAACATT+TGG 0.337778 7_2:-75721881 Msa1077170:CDS
AAGAATAAGATTATGGGTTC+TGG 0.338061 7_2:-75724954 Msa1077170:CDS
AACTATTTCCACATTCTAAC+GGG 0.341273 7_2:+75721535 None:intergenic
GCAGGCAACACCAAATTCTT+TGG 0.343316 7_2:-75722210 Msa1077170:CDS
AAAGATGCCTATCAAAGAAA+TGG 0.345096 7_2:-75722982 Msa1077170:CDS
GGTCAAAGCTAAAGAGAAAA+TGG 0.347194 7_2:-75722066 Msa1077170:CDS
AACAGCTTTGTTCTTGTCCT+TGG 0.347232 7_2:-75722478 Msa1077170:CDS
TTCTCTTCTGTTCACTATAT+AGG 0.352412 7_2:+75723115 None:intergenic
TGTAATATAATGAGTATAAT+TGG 0.352936 7_2:+75724380 None:intergenic
TTAGGACCAGGCTCAGGCTT+GGG 0.355870 7_2:+75725107 None:intergenic
CTGCTGTTGTCTAAATTTGA+TGG 0.359671 7_2:+75728020 None:intergenic
GATCCAGTACTTCAACTATA+AGG 0.361511 7_2:-75724979 Msa1077170:CDS
GGATCAGAAATCGCTGGAAT+TGG 0.361921 7_2:+75724684 None:intergenic
AGTGACAAAGTCTGCCCTTA+AGG 0.363924 7_2:-75727899 Msa1077170:five_prime_UTR
TCATTATATTACATGCATTT+GGG 0.367391 7_2:-75724370 Msa1077170:CDS
CTCCCATTGCTGTTGATGTC+TGG 0.368048 7_2:+75724920 None:intergenic
CGTTCCGAAGCAGAACCTTA+TGG 0.368325 7_2:-75725335 Msa1077170:CDS
ATCTTTACATGTTATGTTGT+CGG 0.370917 7_2:+75722999 None:intergenic
GGTTTAGTCGATGTGGGGAT+TGG 0.377588 7_2:+75727070 None:intergenic
AAGTCAACAGAACATCTTCC+TGG 0.381852 7_2:+75724322 None:intergenic
CGTTGCCCTGGAAAACCTTA+AGG 0.387172 7_2:+75727884 None:intergenic
TGGGACACCATACCATACTT+TGG 0.389184 7_2:+75724342 None:intergenic
TGCTGTGACACTTTGGAGGC+TGG 0.391434 7_2:-75724726 Msa1077170:CDS
GCTCAAATTCAGCGAATTGA+TGG 0.393112 7_2:-75725227 Msa1077170:CDS
CCGTTATGAAATCAGTGAAT+TGG 0.398301 7_2:-75722435 Msa1077170:CDS
AGCTGTAAAGTACAGGATTC+AGG 0.400145 7_2:+75721621 None:intergenic
GCCAGATATGCATGATAATC+TGG 0.402570 7_2:-75724245 Msa1077170:intron
AAAGTACTTCAACTAATAAT+GGG 0.403187 7_2:-75725085 Msa1077170:CDS
ACAGAAGCAGAACTGGTATA+AGG 0.405209 7_2:+75721594 None:intergenic
TACTAGGGATCCGCTTGGCT+TGG 0.406774 7_2:+75722162 None:intergenic
AAATGGGCCAAAGAAGATCT+TGG 0.407779 7_2:-75722368 Msa1077170:CDS
AAGGATAAGAATAAGATTAT+GGG 0.410951 7_2:-75724960 Msa1077170:CDS
ATTTGGGTGAACCCAAAGTA+TGG 0.415501 7_2:-75724354 Msa1077170:CDS
TTCTTTGAAGTCACAAAAGA+TGG 0.415550 7_2:-75722618 Msa1077170:CDS
GGGACACCATACCATACTTT+GGG 0.416059 7_2:+75724343 None:intergenic
GGAGGTTCTTCATCAAGCTT+TGG 0.416994 7_2:-75722414 Msa1077170:CDS
TATCCTTATAGTTGAAGTAC+TGG 0.420342 7_2:+75724976 None:intergenic
AAACCTGATAGCAAGGCAAT+TGG 0.421871 7_2:-75721987 Msa1077170:CDS
TTTGGAAGAGAACACTTTGT+AGG 0.423810 7_2:+75725779 None:intergenic
TGTGCTCTTCATACATATAT+CGG 0.424711 7_2:+75723023 None:intergenic
TCTTTACATGTTATGTTGTC+GGG 0.425268 7_2:+75723000 None:intergenic
AACCTGATAGCAAGGCAATT+GGG 0.428288 7_2:-75721986 Msa1077170:CDS
AATCCTGAATGATATGTTCC+AGG 0.433145 7_2:+75723216 None:intergenic
GTTTAGTCGATGTGGGGATT+GGG 0.434106 7_2:+75727071 None:intergenic
CTTCCGGTGCATACTGAACT+TGG 0.435200 7_2:+75725201 None:intergenic
TATACCTCAATTTCATCAGT+TGG 0.436860 7_2:+75724849 None:intergenic
CAATGGACCTGGAATACAAT+TGG 0.437316 7_2:+75721568 None:intergenic
TTTAGGACCAGGCTCAGGCT+TGG 0.439551 7_2:+75725106 None:intergenic
CCTCAGGTTTACACTTGCTC+TGG 0.440237 7_2:+75726984 None:intergenic
CTTTGTTCTTGTCCTTGGAC+AGG 0.440380 7_2:-75722473 Msa1077170:CDS
ACATATATCGGTTTCCCATC+GGG 0.442559 7_2:+75723035 None:intergenic
GAGAATATTGAGGGTGAATA+CGG 0.446734 7_2:-75724888 Msa1077170:CDS
GATTTATTCCTGTCTGCTGT+TGG 0.450518 7_2:-75722545 Msa1077170:CDS
TTGGAAGAGAACACTTTGTA+GGG 0.454423 7_2:+75725780 None:intergenic
AAAATTTCTGTGCAGCTTCA+GGG 0.455912 7_2:+75724568 None:intergenic
ACTAGGGATCCGCTTGGCTT+GGG 0.459280 7_2:+75722163 None:intergenic
CCTCTGTGTAGTCTCGTATC+AGG 0.460658 7_2:-75722673 Msa1077170:intron
GAAGTATTGCCATCCATCTC+AGG 0.463056 7_2:+75727049 None:intergenic
GGTTCTCTGCTGTGACACTT+TGG 0.464231 7_2:-75724733 Msa1077170:CDS
GTTATCCTGCTCAGTATTGA+AGG 0.465862 7_2:-75723298 Msa1077170:CDS
TTGGCTCACAGAAGCAGAAC+TGG 0.468632 7_2:+75721587 None:intergenic
ACTAAGTGCAGTCTATAAAT+GGG 0.469259 7_2:-75722384 Msa1077170:CDS
CACTGATTTCATAACGGTAA+AGG 0.470026 7_2:+75722441 None:intergenic
ACAAAGTGTTCTCTTCCAAA+AGG 0.471003 7_2:-75725776 Msa1077170:CDS
AATAATATGCGTTCACTCCC+AGG 0.476422 7_2:-75724612 Msa1077170:CDS
ACTTCTCTTCTTGCATCCTC+AGG 0.476635 7_2:+75725611 None:intergenic
TGCTGTTGTCTAAATTTGAT+GGG 0.476913 7_2:+75728021 None:intergenic
TGTGACAAGGAGCCTGAGCC+TGG 0.477456 7_2:-75725050 Msa1077170:CDS
GAAGTTTCTTCATCAACTCC+AGG 0.483405 7_2:-75721918 Msa1077170:CDS
TGCTCAGTGCGAGATTCCTC+AGG 0.483895 7_2:+75726968 None:intergenic
AGCCAGACATCAACAGCAAT+GGG 0.484436 7_2:-75724922 Msa1077170:CDS
AAAGACAAGAAACGTGAGCC+TGG 0.484937 7_2:+75721900 None:intergenic
GATTTCCGGCTAGTTTAGTT+CGG 0.485664 7_2:+75727962 None:intergenic
AAGATGCCTATCAAAGAAAT+GGG 0.487313 7_2:-75722981 Msa1077170:CDS
GGACTACTGTGAGTACTACT+AGG 0.489601 7_2:+75722146 None:intergenic
TGTTAAGAACAGTGAGTACA+AGG 0.491343 7_2:+75721691 None:intergenic
CAACTATTTCCACATTCTAA+CGG 0.495270 7_2:+75721534 None:intergenic
AGCTAGTAGGAGGGACAATA+CGG 0.495876 7_2:+75725306 None:intergenic
AAGGAGCCCAAGCCTGAGCC+TGG 0.497525 7_2:-75725113 Msa1077170:CDS
CTTCACTGCCAGTTGTAAAA+GGG 0.498787 7_2:-75722588 Msa1077170:CDS
GGTAAAGGAAGTAATTCTGC+TGG 0.499869 7_2:-75722014 Msa1077170:CDS
GTTGCCCTGGAAAACCTTAA+GGG 0.503945 7_2:+75727885 None:intergenic
AAATCCAACTGATGAAATTG+AGG 0.504435 7_2:-75724853 Msa1077170:intron
AAATCTGCTGCAACAAGCAT+TGG 0.504588 7_2:-75722035 Msa1077170:CDS
CAGGGCTGTCAAAGGAAAGA+AGG 0.504964 7_2:+75724586 None:intergenic
TACATATATCGGTTTCCCAT+CGG 0.505837 7_2:+75723034 None:intergenic
AGGGATCCGCTTGGCTTGGG+AGG 0.506797 7_2:+75722166 None:intergenic
CTCTCCCTTCAATACTGAGC+AGG 0.508006 7_2:+75723293 None:intergenic
TCTCTGCTGTGACACTTTGG+AGG 0.508464 7_2:-75724730 Msa1077170:CDS
GGTGGAGAAACAGAGCGAAA+TGG 0.509394 7_2:-75722189 Msa1077170:CDS
GCTGTTACTGGGAGCAGCTA+GGG 0.511571 7_2:-75723070 Msa1077170:CDS
GGATAATTGCATGCCTTCAG+AGG 0.515342 7_2:+75724663 None:intergenic
CTCAAATTCAGCGAATTGAT+GGG 0.516662 7_2:-75725226 Msa1077170:CDS
TTGATTTCTGGGAGGCAACT+GGG 0.523006 7_2:+75722333 None:intergenic
ACCTGATAGCAAGGCAATTG+GGG 0.524360 7_2:-75721985 Msa1077170:CDS
GTTCTTCATCAAGCTTTGGA+TGG 0.524369 7_2:-75722410 Msa1077170:CDS
CTGAATATTTAAAATCTGGA+TGG 0.526616 7_2:-75724641 Msa1077170:CDS
AATTCCATAAGGTTCTGCTT+CGG 0.530224 7_2:+75725331 None:intergenic
CAAAGTGTTCTCTTCCAAAA+GGG 0.531336 7_2:-75725775 Msa1077170:CDS
ATCTCAGGTTTAGTCGATGT+GGG 0.531947 7_2:+75727064 None:intergenic
TGAGAGCTAGTCATAACTTC+CGG 0.532651 7_2:+75725185 None:intergenic
GACTTTGTCACTGTATGTGT+TGG 0.534826 7_2:+75727910 None:intergenic
AAAGTATGGTATGGTGTCCC+AGG 0.535009 7_2:-75724340 Msa1077170:CDS
GGCGGTTTCCAGCTAGTAGG+AGG 0.535578 7_2:+75725296 None:intergenic
AGGCGAAAGCTGTAAAGTAC+AGG 0.536489 7_2:+75721614 None:intergenic
ATTACCAATTTAGTCATAGG+AGG 0.537272 7_2:+75726944 None:intergenic
GTATTGTCCCTCCTACTAGC+TGG 0.537758 7_2:-75725304 Msa1077170:CDS
CTCTGGTCGGATATTATCCA+TGG 0.540007 7_2:+75727001 None:intergenic
CCAATTCACTGATTTCATAA+CGG 0.540819 7_2:+75722435 None:intergenic
TATCATTCAGGATTTGATTG+TGG 0.542048 7_2:-75723207 Msa1077170:CDS
GTGGTAGGTACCTCTTCTGT+TGG 0.542721 7_2:+75725563 None:intergenic
GATGTTAGGGATGCAAAACC+AGG 0.542783 7_2:+75727130 None:intergenic
CCCTCAATATTCTCAACAGA+TGG 0.545292 7_2:+75724897 None:intergenic
CGCGCGATGCATACAACAAG+TGG 0.545626 7_2:-75722247 Msa1077170:CDS
CTGAATTTAGGACCAGGCTC+AGG 0.547456 7_2:+75725038 None:intergenic
GTGGAAACAGCGTAAATCGC+AGG 0.548981 7_2:-75722228 Msa1077170:CDS
CCATCTGTTGAGAATATTGA+GGG 0.549278 7_2:-75724897 Msa1077170:CDS
TCAAAGGAAAGAAGGGAACC+TGG 0.549860 7_2:+75724594 None:intergenic
TGCAGCTTCAGGGCTGTCAA+AGG 0.551585 7_2:+75724578 None:intergenic
ACAATACGGCAAATTCCATA+AGG 0.551943 7_2:+75725320 None:intergenic
TTATGAAATCAGTGAATTGG+AGG 0.552346 7_2:-75722432 Msa1077170:CDS
AGCTGTTACTGGGAGCAGCT+AGG 0.552409 7_2:-75723071 Msa1077170:CDS
CTCACAATTTCAAAGAAAGT+AGG 0.553553 7_2:-75721957 Msa1077170:CDS
TGGAAGAGAACACTTTGTAG+GGG 0.556256 7_2:+75725781 None:intergenic
GGCAACACCAAATTCTTTGG+TGG 0.557509 7_2:-75722207 Msa1077170:CDS
ATTAGATTTCTAGTCCTCAT+CGG 0.557913 7_2:+75721830 None:intergenic
TTCAGAGGATCAGAAATCGC+TGG 0.559363 7_2:+75724678 None:intergenic
CAGCCAGACATCAACAGCAA+TGG 0.559438 7_2:-75724923 Msa1077170:CDS
TCATACGACAAGCTGTTACT+GGG 0.559948 7_2:-75723081 Msa1077170:CDS
AGCGATTTCTGATCCTCTGA+AGG 0.565492 7_2:-75724676 Msa1077170:CDS
CACATTCCCACATGTACCCT+AGG 0.568981 7_2:+75724543 None:intergenic
GCCATCTGTTGAGAATATTG+AGG 0.570248 7_2:-75724898 Msa1077170:CDS
TTTGTCACTGTATGTGTTGG+TGG 0.574045 7_2:+75727913 None:intergenic
GTTTCTTCCCCGTTAGAATG+TGG 0.574206 7_2:-75721543 Msa1077170:three_prime_UTR
CATCTCAGGTTTAGTCGATG+TGG 0.575846 7_2:+75727063 None:intergenic
CACATCGACTAAACCTGAGA+TGG 0.577188 7_2:-75727062 Msa1077170:CDS
ACGGACAACCAACAGCAGAC+AGG 0.578818 7_2:+75722537 None:intergenic
TCACTGTATGTGTTGGTGGA+CGG 0.578934 7_2:+75727917 None:intergenic
GGAGTGCGAGATATGTATGC+AGG 0.580170 7_2:-75724271 Msa1077170:CDS
ATTTGGAAGAAGTATCTCGT+TGG 0.581237 7_2:-75724292 Msa1077170:CDS
GCTGCAACAAGCATTGGTAA+AGG 0.581987 7_2:-75722029 Msa1077170:CDS
AGTCAACAGAACATCTTCCT+GGG 0.584474 7_2:+75724323 None:intergenic
TGCTCAGTATTGAAGGGAGA+GGG 0.585190 7_2:-75723291 Msa1077170:CDS
CCATGAAGCAACCACTCAAG+AGG 0.586905 7_2:+75723153 None:intergenic
GACTACTGTGAGTACTACTA+GGG 0.587660 7_2:+75722147 None:intergenic
TCATTCAGCAATATCAAATG+AGG 0.587936 7_2:-75722087 Msa1077170:CDS
TGTTGGTGGACGGACGGAGG+AGG 0.589500 7_2:+75727927 None:intergenic
CATGGCGGTTTCCAGCTAGT+AGG 0.590626 7_2:+75725293 None:intergenic
AGGGCTGTCAAAGGAAAGAA+GGG 0.592701 7_2:+75724587 None:intergenic
AGGAGAATTCTGCCTGTCCA+AGG 0.593390 7_2:+75722461 None:intergenic
AGGTTTACACTTGCTCTGGT+CGG 0.593874 7_2:+75726988 None:intergenic
AGGCTTGGGCTCCTTGTCCG+TGG 0.595165 7_2:+75725121 None:intergenic
AAAGGATGACAATGTTAAGT+CGG 0.595966 7_2:-75727095 Msa1077170:CDS
CTGCTCAGTATTGAAGGGAG+AGG 0.597882 7_2:-75723292 Msa1077170:CDS
GTAAAGGAAGTAATTCTGCT+GGG 0.598380 7_2:-75722013 Msa1077170:CDS
AGCTCTGATCTGCTGCGACG+CGG 0.599973 7_2:+75727851 None:intergenic
ACATTCCCACATGTACCCTA+GGG 0.600704 7_2:+75724544 None:intergenic
CCTACCTGTGTTGTCAATGT+CGG 0.600822 7_2:+75727817 None:intergenic
TGGGATCAAACCTGATAGCA+AGG 0.606044 7_2:-75721994 Msa1077170:CDS
GGAAGAAACAACAATGGACC+TGG 0.607458 7_2:+75721557 None:intergenic
TACTGAATACACCGATACAC+TGG 0.607962 7_2:+75723264 None:intergenic
TATTAGCAATAAACCTAGAG+AGG 0.609195 7_2:+75721776 None:intergenic
TGCAAAACCAGGCGGAATCG+AGG 0.610417 7_2:+75727141 None:intergenic
AGATTTGTGCACTACGGCCA+TGG 0.610861 7_2:-75727018 Msa1077170:CDS
TTGAGACTGAATTTAGGACC+AGG 0.613583 7_2:+75725032 None:intergenic
AAAGCTAAAGAGAAAATGGT+GGG 0.613758 7_2:-75722062 Msa1077170:CDS
TCTCACCGAACTAAACTAGC+CGG 0.619354 7_2:-75727967 Msa1077170:five_prime_UTR
TACTTCAACTAATAATGGGA+AGG 0.620636 7_2:-75725081 Msa1077170:CDS
GAGAGGGTATACCAGTGTAT+CGG 0.623299 7_2:-75723275 Msa1077170:CDS
GATGAAAGTAGCCACGGACA+AGG 0.625493 7_2:-75725132 Msa1077170:CDS
AAGACACACAAACTTGTCAT+CGG 0.626742 7_2:+75722511 None:intergenic
TTGTGGTTTCAACTGTTCTG+AGG 0.627086 7_2:-75723190 Msa1077170:CDS
AAAAGAACCTATATTGCAGT+CGG 0.627731 7_2:-75722270 Msa1077170:CDS
GGAAGCTGTGAGGACCCGAT+GGG 0.628302 7_2:-75723049 Msa1077170:CDS
GCACCAAGTTCAGTATGCAC+CGG 0.628932 7_2:-75725204 Msa1077170:CDS
ACAAACTTGTCATCGGAGCA+CGG 0.629702 7_2:+75722518 None:intergenic
TTATCCTGCTCAGTATTGAA+GGG 0.633909 7_2:-75723297 Msa1077170:CDS
TCAGGAGTGAAAGTTTGAAG+AGG 0.636631 7_2:-75722655 Msa1077170:CDS
TCGACTAAACCTGAGATGGA+TGG 0.637166 7_2:-75727058 Msa1077170:CDS
GGAAGAGAACACTTTGTAGG+GGG 0.638236 7_2:+75725782 None:intergenic
TAGGTACCTCTTCTGTTGGA+CGG 0.638827 7_2:+75725567 None:intergenic
CAAAGGAAAGAAGGGAACCT+GGG 0.640625 7_2:+75724595 None:intergenic
TGTATGTGTTGGTGGACGGA+CGG 0.641257 7_2:+75727921 None:intergenic
TCTCAGGTTTAGTCGATGTG+GGG 0.642919 7_2:+75727065 None:intergenic
AAAAGTGATGAAAGTAGCCA+CGG 0.644146 7_2:-75725138 Msa1077170:CDS
ACTAAACTAGCCGGAAATCG+CGG 0.644709 7_2:-75727958 Msa1077170:five_prime_UTR
GGTGAACCCAAAGTATGGTA+TGG 0.647828 7_2:-75724349 Msa1077170:CDS
ATAAACAGATTTGTGCACTA+CGG 0.655577 7_2:-75727024 Msa1077170:CDS
AGTACTACTAGGGATCCGCT+TGG 0.655954 7_2:+75722157 None:intergenic
GCGGTTTCCAGCTAGTAGGA+GGG 0.665415 7_2:+75725297 None:intergenic
TAACGGGGAAGAAACAACAA+TGG 0.675016 7_2:+75721551 None:intergenic
TGCACCGACATTGACAACAC+AGG 0.679889 7_2:-75727821 Msa1077170:intron
CAAAGCTAAAGAGAAAATGG+TGG 0.686433 7_2:-75722063 Msa1077170:CDS
AAATGGCCTCCCAAGCCAAG+CGG 0.688657 7_2:-75722172 Msa1077170:CDS
ATGTGTTGGTGGACGGACGG+AGG 0.692868 7_2:+75727924 None:intergenic
CCAGAGCAAGTGTAAACCTG+AGG 0.693815 7_2:-75726984 Msa1077170:CDS
TCTGGAACCAGGTAACAGCA+AGG 0.702176 7_2:-75725640 Msa1077170:intron
TAGTTCTTCAGAATCCGATG+AGG 0.708240 7_2:-75721844 Msa1077170:CDS
ACTATTTCCACATTCTAACG+GGG 0.710753 7_2:+75721536 None:intergenic
GTTAGGGATGCAAAACCAGG+CGG 0.712509 7_2:+75727133 None:intergenic
AATGGCATTACCCATCTGAG+TGG 0.723229 7_2:+75724513 None:intergenic
AAGACAAGAACAAACTCACG+AGG 0.728244 7_2:+75723240 None:intergenic
GAAGGTTAAAGACTGTGACA+AGG 0.732117 7_2:-75725063 Msa1077170:CDS
AAGCTAAAGAGAAAATGGTG+GGG 0.744347 7_2:-75722061 Msa1077170:CDS
GGAACCAGGTAACAGCAAGG+TGG 0.748113 7_2:-75725637 Msa1077170:intron
CATTCCCACATGTACCCTAG+GGG 0.752220 7_2:+75724545 None:intergenic
GAGCAGCTAGGGAAGCTGTG+AGG 0.761413 7_2:-75723059 Msa1077170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATATCATATTTGAT+TGG - chr7_2:75722333-75722352 Msa1077170:CDS 10.0%
!!! ATTCTTAATTTTATTTAACA+CGG + chr7_2:75723604-75723623 None:intergenic 10.0%
!! CTTAAATATAAAAAAACAAA+TGG + chr7_2:75725420-75725439 None:intergenic 10.0%
!! AAAGTTTAATACTATAAATA+AGG + chr7_2:75725858-75725877 None:intergenic 10.0%
!! TAATGAAAATAGTAGTAAAT+AGG + chr7_2:75721804-75721823 None:intergenic 15.0%
!!! GATTTTTGTAAAATTGATTT+CGG - chr7_2:75721920-75721939 Msa1077170:CDS 15.0%
!!! TAAAAATAACTTTTAGAATG+TGG - chr7_2:75722018-75722037 Msa1077170:CDS 15.0%
!!! AAAAATAACTTTTAGAATGT+GGG - chr7_2:75722019-75722038 Msa1077170:CDS 15.0%
!! CTTAATGAAATTATTAGTTA+TGG - chr7_2:75722136-75722155 Msa1077170:CDS 15.0%
!!! TGTTATTCATTTTATGTTTA+TGG - chr7_2:75722280-75722299 Msa1077170:CDS 15.0%
!!! TTTTAGATAAAAAGATGTTA+GGG + chr7_2:75722452-75722471 None:intergenic 15.0%
!!! TTTTTAGATAAAAAGATGTT+AGG + chr7_2:75722453-75722472 None:intergenic 15.0%
!!! AACATCTTTTTATCTAAAAA+AGG - chr7_2:75722453-75722472 Msa1077170:CDS 15.0%
!!! TTGGTAATTTTCAATTTTTT+TGG - chr7_2:75722637-75722656 Msa1077170:CDS 15.0%
!!! CATATATTTTTTCAAGAATT+TGG - chr7_2:75723001-75723020 Msa1077170:CDS 15.0%
!! AGAAAGTAATAAATAGTTAA+GGG - chr7_2:75723232-75723251 Msa1077170:CDS 15.0%
!! GTTGTTTATTTATATAAATC+TGG - chr7_2:75723908-75723927 Msa1077170:intron 15.0%
!! TGTAATATAATGAGTATAAT+TGG + chr7_2:75725189-75725208 None:intergenic 15.0%
!!! ATGTTAGAAACAATTTATTT+TGG - chr7_2:75727918-75727937 Msa1077170:five_prime_UTR 15.0%
!!! TGTTAGAAACAATTTATTTT+GGG - chr7_2:75727919-75727938 Msa1077170:five_prime_UTR 15.0%
!!! TTTTTTTTTTGTGTGTTTGA+TGG + chr7_2:75721574-75721593 None:intergenic 20.0%
!! AAAATTACCAATTTAGTCAT+AGG + chr7_2:75722628-75722647 None:intergenic 20.0%
!! ACCAAAACAACTTATAATTA+GGG + chr7_2:75723094-75723113 None:intergenic 20.0%
!! ACGAAATTGTCTTTAATAAA+TGG - chr7_2:75723176-75723195 Msa1077170:CDS 20.0%
!! ATTGTCTTTAATAAATGGTA+TGG - chr7_2:75723181-75723200 Msa1077170:CDS 20.0%
!! TTGTCTTTAATAAATGGTAT+GGG - chr7_2:75723182-75723201 Msa1077170:CDS 20.0%
!! GAGAAAGTAATAAATAGTTA+AGG - chr7_2:75723231-75723250 Msa1077170:CDS 20.0%
!! ATATTGAACGACATATAATT+TGG - chr7_2:75723271-75723290 Msa1077170:CDS 20.0%
!! TATTGAACGACATATAATTT+GGG - chr7_2:75723272-75723291 Msa1077170:CDS 20.0%
!!! TTAAAACAATTACTGCATTT+TGG + chr7_2:75723832-75723851 None:intergenic 20.0%
!!! AAAATGCAGTAATTGTTTTA+AGG - chr7_2:75723831-75723850 Msa1077170:intron 20.0%
!! TATAAATAAACAACCAAAAG+TGG + chr7_2:75723902-75723921 None:intergenic 20.0%
!! TACAATTGAATACATTATCA+AGG - chr7_2:75724119-75724138 Msa1077170:intron 20.0%
!! TCAAAGAAACTTAAATAATG+TGG - chr7_2:75724145-75724164 Msa1077170:intron 20.0%
!! TTAAATAATGTGGATTCATA+TGG - chr7_2:75724155-75724174 Msa1077170:intron 20.0%
!! TCTTGAAAAAAAGAATGTAT+GGG - chr7_2:75724299-75724318 Msa1077170:CDS 20.0%
!!! TTATTAGTTGAAGTACTTTT+AGG + chr7_2:75724480-75724499 None:intergenic 20.0%
!!! AAAAGTACTTCAACTAATAA+TGG - chr7_2:75724480-75724499 Msa1077170:intron 20.0%
!!! AAAGTACTTCAACTAATAAT+GGG - chr7_2:75724481-75724500 Msa1077170:intron 20.0%
!!! TCTCAAAACTTTTAAGAAAT+TGG - chr7_2:75724551-75724570 Msa1077170:CDS 20.0%
!! TAAGGATAAGAATAAGATTA+TGG - chr7_2:75724605-75724624 Msa1077170:CDS 20.0%
!! AAGGATAAGAATAAGATTAT+GGG - chr7_2:75724606-75724625 Msa1077170:CDS 20.0%
!!! AATATTTTCACAACTTATCA+AGG + chr7_2:75724789-75724808 None:intergenic 20.0%
!!! TATCCTGAATATTTAAAATC+TGG - chr7_2:75724921-75724940 Msa1077170:CDS 20.0%
!! GTATAATGCAATAAATCAAA+TGG + chr7_2:75725074-75725093 None:intergenic 20.0%
!!! GTTTTGTCAAATGATTATAA+AGG + chr7_2:75725150-75725169 None:intergenic 20.0%
!! TCATTATATTACATGCATTT+GGG - chr7_2:75725196-75725215 Msa1077170:CDS 20.0%
!! GATATGATATTTGACAAAAT+AGG + chr7_2:75725476-75725495 None:intergenic 20.0%
!!! ATATCATATCATTGATTAGA+TGG - chr7_2:75725486-75725505 Msa1077170:intron 20.0%
!! AAAATTATGGCATTAAAACA+TGG + chr7_2:75725606-75725625 None:intergenic 20.0%
!! TCCAAATTCATGAAAAATTA+TGG + chr7_2:75725619-75725638 None:intergenic 20.0%
!! ATTATCATTCCTTCAAATTT+GGG + chr7_2:75725717-75725736 None:intergenic 20.0%
!! AATTATCATTCCTTCAAATT+TGG + chr7_2:75725718-75725737 None:intergenic 20.0%
!! GTATTAAACTTTAGATGTAA+TGG - chr7_2:75725866-75725885 Msa1077170:intron 20.0%
!! TAAATACAACCAAAGAATAT+TGG + chr7_2:75726038-75726057 None:intergenic 20.0%
!!! TTTGGTTGTATTTATTCTTT+TGG - chr7_2:75726044-75726063 Msa1077170:intron 20.0%
!!! TGATTCTTAGTTTGAATATT+TGG - chr7_2:75726232-75726251 Msa1077170:intron 20.0%
!! AAACATAATTAGTATGCATA+GGG + chr7_2:75726869-75726888 None:intergenic 20.0%
!! AAAAGTAAAAACTTTCTTTC+TGG + chr7_2:75727762-75727781 None:intergenic 20.0%
!!! AATTAGTATATCTTTTTCGT+TGG - chr7_2:75727847-75727866 Msa1077170:five_prime_UTR 20.0%
!!! AGGATACTAAATTTAGTTCT+TGG - chr7_2:75721769-75721788 Msa1077170:three_prime_UTR 25.0%
! TTACTAAAATAAGCTCAAGA+AGG - chr7_2:75722174-75722193 Msa1077170:CDS 25.0%
! TACTAAAATAAGCTCAAGAA+GGG - chr7_2:75722175-75722194 Msa1077170:CDS 25.0%
!!! TCAAGAATTTGGTTTGAATA+AGG - chr7_2:75723012-75723031 Msa1077170:CDS 25.0%
! TATCTAAGTGTGTATTCTAT+CGG + chr7_2:75723058-75723077 None:intergenic 25.0%
! AAACAACTTATAATTAGGGA+CGG + chr7_2:75723090-75723109 None:intergenic 25.0%
!! TCCCTAATTATAAGTTGTTT+TGG - chr7_2:75723090-75723109 Msa1077170:CDS 25.0%
! GACCAAAACAACTTATAATT+AGG + chr7_2:75723095-75723114 None:intergenic 25.0%
! ATGAAATGCAATTAACTCTA+TGG - chr7_2:75723129-75723148 Msa1077170:CDS 25.0%
! TGAAATGCAATTAACTCTAT+GGG - chr7_2:75723130-75723149 Msa1077170:CDS 25.0%
!!! AAACACATAAAAGTTTGCTA+CGG + chr7_2:75723377-75723396 None:intergenic 25.0%
! TAAGAACTTAGAAGTTAGAT+AGG - chr7_2:75723525-75723544 Msa1077170:intron 25.0%
!!! AATTTTATTTAACACGGAAC+AGG + chr7_2:75723598-75723617 None:intergenic 25.0%
! GAATTAGTACTCTTTGAATT+TGG + chr7_2:75723627-75723646 None:intergenic 25.0%
! TATAGTAATATGGAAAGTTC+AGG + chr7_2:75723872-75723891 None:intergenic 25.0%
!! ATTTATATAAATCTGGAACC+AGG - chr7_2:75723915-75723934 Msa1077170:intron 25.0%
! TTGATTTATGTCATCAAATG+TGG - chr7_2:75724073-75724092 Msa1077170:intron 25.0%
!!! TTCTTTTTTTCAAGAGTACA+TGG + chr7_2:75724294-75724313 None:intergenic 25.0%
! CTCTTGAAAAAAAGAATGTA+TGG - chr7_2:75724298-75724317 Msa1077170:CDS 25.0%
!!! AAAGTTTTGAGACTGAATTT+AGG + chr7_2:75724543-75724562 None:intergenic 25.0%
! TCAAGGACTAAAATTATAGA+AGG + chr7_2:75724772-75724791 None:intergenic 25.0%
!! CATCCAGATTTTAAATATTC+AGG + chr7_2:75724927-75724946 None:intergenic 25.0%
!! CTGAATATTTAAAATCTGGA+TGG - chr7_2:75724925-75724944 Msa1077170:CDS 25.0%
! GATTATAAAGGATAGTAATC+AGG + chr7_2:75725138-75725157 None:intergenic 25.0%
! CTCATTATATTACATGCATT+TGG - chr7_2:75725195-75725214 Msa1077170:CDS 25.0%
! TTCCAGAAATAGTAATAGTT+GGG + chr7_2:75725567-75725586 None:intergenic 25.0%
!! GCCATAATTTTTCATGAATT+TGG - chr7_2:75725615-75725634 Msa1077170:CDS 25.0%
!!! TCTAAGAGGAATTTTATTTG+TGG - chr7_2:75725809-75725828 Msa1077170:intron 25.0%
!!! CTAAGAGGAATTTTATTTGT+GGG - chr7_2:75725810-75725829 Msa1077170:intron 25.0%
! GTAATGACATGAAATATAAG+AGG - chr7_2:75726161-75726180 Msa1077170:intron 25.0%
!! TTAGTTTGAATATTTGGTAC+AGG - chr7_2:75726238-75726257 Msa1077170:intron 25.0%
! ATCTTTACATGTTATGTTGT+CGG + chr7_2:75726570-75726589 None:intergenic 25.0%
!! TTTTCATTCATCAAGATGAA+TGG + chr7_2:75726718-75726737 None:intergenic 25.0%
! GAATGAAAATGAAGAAATAG+TGG - chr7_2:75726729-75726748 Msa1077170:intron 25.0%
!!! TTTATTTTCATTCTTGCGTA+TGG - chr7_2:75726807-75726826 Msa1077170:intron 25.0%
! CAAACATAATTAGTATGCAT+AGG + chr7_2:75726870-75726889 None:intergenic 25.0%
!!! TGAATCATTTACTTTTTCTG+GGG + chr7_2:75727265-75727284 None:intergenic 25.0%
!!! CTGAATCATTTACTTTTTCT+GGG + chr7_2:75727266-75727285 None:intergenic 25.0%
!!! TCTGAATCATTTACTTTTTC+TGG + chr7_2:75727267-75727286 None:intergenic 25.0%
!!! GTAAAGTTGTGTTCTTTTTT+GGG + chr7_2:75727458-75727477 None:intergenic 25.0%
!!! AGTAAAGTTGTGTTCTTTTT+TGG + chr7_2:75727459-75727478 None:intergenic 25.0%
!! AAGAAACTTCAGAAACTTTT+GGG + chr7_2:75727638-75727657 None:intergenic 25.0%
!!! TTGTTTCTAACATGCATATT+AGG + chr7_2:75727911-75727930 None:intergenic 25.0%
!!! TAGAAACAATTTATTTTGGG+AGG - chr7_2:75727922-75727941 Msa1077170:five_prime_UTR 25.0%
TGCTGTTGTCTAAATTTGAT+GGG + chr7_2:75721548-75721567 None:intergenic 30.0%
TAGCATACACAAGAAAAATG+TGG + chr7_2:75721834-75721853 None:intergenic 30.0%
AAAGGATGACAATGTTAAGT+CGG - chr7_2:75722471-75722490 Msa1077170:CDS 30.0%
ATAAACAGATTTGTGCACTA+CGG - chr7_2:75722542-75722561 Msa1077170:CDS 30.0%
ATTACCAATTTAGTCATAGG+AGG + chr7_2:75722625-75722644 None:intergenic 30.0%
CATTTCAGACTCAATATTCT+GGG + chr7_2:75722676-75722695 None:intergenic 30.0%
!!! AGCAACACTGATTTTTCAAA+TGG + chr7_2:75722749-75722768 None:intergenic 30.0%
!! AACACATAAAAGTTTGCTAC+GGG + chr7_2:75723376-75723395 None:intergenic 30.0%
ATATGTCCAGTTATGTTTGA+CGG - chr7_2:75723428-75723447 Msa1077170:intron 30.0%
AGTTAAAGATAACTGCATTC+AGG - chr7_2:75723551-75723570 Msa1077170:intron 30.0%
GTATGAAGGCAAAATAACTA+TGG - chr7_2:75723735-75723754 Msa1077170:intron 30.0%
TGGTCATCTCTATAGTAATA+TGG + chr7_2:75723882-75723901 None:intergenic 30.0%
!!! TTTTTTTCAAGAGTACATGG+CGG + chr7_2:75724291-75724310 None:intergenic 30.0%
!! TTTCATCACTTTTCTTCTCT+TGG + chr7_2:75724421-75724440 None:intergenic 30.0%
! TACTTCAACTAATAATGGGA+AGG - chr7_2:75724485-75724504 Msa1077170:intron 30.0%
TATCCTTATAGTTGAAGTAC+TGG + chr7_2:75724593-75724612 None:intergenic 30.0%
AAGAATAAGATTATGGGTTC+TGG - chr7_2:75724612-75724631 Msa1077170:CDS 30.0%
AAATCCAACTGATGAAATTG+AGG - chr7_2:75724713-75724732 Msa1077170:CDS 30.0%
TATACCTCAATTTCATCAGT+TGG + chr7_2:75724720-75724739 None:intergenic 30.0%
TAGTAATCAGGAGATTCATT+AGG + chr7_2:75725126-75725145 None:intergenic 30.0%
!! CTGTTGACTTTGAAACAATT+TGG - chr7_2:75725257-75725276 Msa1077170:CDS 30.0%
TTATCATTGAAAAGTGACAG+TGG - chr7_2:75725380-75725399 Msa1077170:intron 30.0%
GTTCCAGAAATAGTAATAGT+TGG + chr7_2:75725568-75725587 None:intergenic 30.0%
! TAGTTGATTCCCAAATTTGA+AGG - chr7_2:75725705-75725724 Msa1077170:intron 30.0%
TTCATCAACTGAAACTCAAT+TGG - chr7_2:75725752-75725771 Msa1077170:CDS 30.0%
TCATCAACTGAAACTCAATT+GGG - chr7_2:75725753-75725772 Msa1077170:CDS 30.0%
! TTTAAGCTTTTTACTGAAGC+GGG + chr7_2:75725998-75726017 None:intergenic 30.0%
! GTTTAAGCTTTTTACTGAAG+CGG + chr7_2:75725999-75726018 None:intergenic 30.0%
AATATTGGAAGCTGAAGTAA+AGG + chr7_2:75726023-75726042 None:intergenic 30.0%
! TACAGTTCTTTTAGTACACA+AGG - chr7_2:75726186-75726205 Msa1077170:intron 30.0%
! ACAGTTCTTTTAGTACACAA+GGG - chr7_2:75726187-75726206 Msa1077170:intron 30.0%
TATCATTCAGGATTTGATTG+TGG - chr7_2:75726359-75726378 Msa1077170:intron 30.0%
TTCTCTTCTGTTCACTATAT+AGG + chr7_2:75726454-75726473 None:intergenic 30.0%
TGTGCTCTTCATACATATAT+CGG + chr7_2:75726546-75726565 None:intergenic 30.0%
TCTTTACATGTTATGTTGTC+GGG + chr7_2:75726569-75726588 None:intergenic 30.0%
AAAGATGCCTATCAAAGAAA+TGG - chr7_2:75726584-75726603 Msa1077170:intron 30.0%
AAGATGCCTATCAAAGAAAT+GGG - chr7_2:75726585-75726604 Msa1077170:intron 30.0%
TAAATGATGTCATCGAATCT+AGG + chr7_2:75726653-75726672 None:intergenic 30.0%
! ATAATAAAAGACAGCTCTGA+AGG - chr7_2:75726772-75726791 Msa1077170:intron 30.0%
CGCAAGAATGAAAATAAAAG+AGG + chr7_2:75726805-75726824 None:intergenic 30.0%
!! TTCTTTGAAGTCACAAAAGA+TGG - chr7_2:75726948-75726967 Msa1077170:intron 30.0%
!! CCAATTCACTGATTTCATAA+CGG + chr7_2:75727134-75727153 None:intergenic 30.0%
TTATGAAATCAGTGAATTGG+AGG - chr7_2:75727134-75727153 Msa1077170:CDS 30.0%
AACTAAGTGCAGTCTATAAA+TGG - chr7_2:75727181-75727200 Msa1077170:five_prime_UTR 30.0%
ACTAAGTGCAGTCTATAAAT+GGG - chr7_2:75727182-75727201 Msa1077170:five_prime_UTR 30.0%
AGTTAAACCAAGATCTTCTT+TGG + chr7_2:75727208-75727227 None:intergenic 30.0%
AAAAGAACCTATATTGCAGT+CGG - chr7_2:75727296-75727315 Msa1077170:intron 30.0%
TCATTCAGCAATATCAAATG+AGG - chr7_2:75727479-75727498 Msa1077170:intron 30.0%
AAAGCTAAAGAGAAAATGGT+GGG - chr7_2:75727504-75727523 Msa1077170:intron 30.0%
CTCACAATTTCAAAGAAAGT+AGG - chr7_2:75727609-75727628 Msa1077170:intron 30.0%
! GAAGAAACTTCAGAAACTTT+TGG + chr7_2:75727639-75727658 None:intergenic 30.0%
CTTTACTACAAGAGAACATT+TGG - chr7_2:75727685-75727704 Msa1077170:intron 30.0%
!! ATTAGATTTCTAGTCCTCAT+CGG + chr7_2:75727739-75727758 None:intergenic 30.0%
! CTTTTTATAATGTCCTCTCT+AGG - chr7_2:75727777-75727796 Msa1077170:intron 30.0%
TATTAGCAATAAACCTAGAG+AGG + chr7_2:75727793-75727812 None:intergenic 30.0%
CTGCTGTTGTCTAAATTTGA+TGG + chr7_2:75721549-75721568 None:intergenic 35.0%
GATGTGACACTTAACATGAA+CGG + chr7_2:75722100-75722119 None:intergenic 35.0%
GCATTTCAGACTCAATATTC+TGG + chr7_2:75722677-75722696 None:intergenic 35.0%
TATCAATTGTTCAGGTGTCT+TGG + chr7_2:75722801-75722820 None:intergenic 35.0%
TGAGGACATATCAATTGTTC+AGG + chr7_2:75722809-75722828 None:intergenic 35.0%
TGAACAATTGATATGTCCTC+AGG - chr7_2:75722808-75722827 Msa1077170:intron 35.0%
ACACTATTTGTATGCAAGTC+AGG + chr7_2:75722917-75722936 None:intergenic 35.0%
AACTTATAATTAGGGACGGA+GGG + chr7_2:75723086-75723105 None:intergenic 35.0%
TCCCAAAGCGACTTATAATT+TGG - chr7_2:75723309-75723328 Msa1077170:CDS 35.0%
! CCCAAATTATAAGTCGCTTT+GGG + chr7_2:75723313-75723332 None:intergenic 35.0%
CCCAAAGCGACTTATAATTT+GGG - chr7_2:75723310-75723329 Msa1077170:intron 35.0%
TCCCAAATTATAAGTCGCTT+TGG + chr7_2:75723314-75723333 None:intergenic 35.0%
AAGCGACTTATAATTTGGGA+TGG - chr7_2:75723314-75723333 Msa1077170:intron 35.0%
! GACTTATAATTTGGGATGGA+GGG - chr7_2:75723318-75723337 Msa1077170:intron 35.0%
TAAATGCCGTCAAACATAAC+TGG + chr7_2:75723437-75723456 None:intergenic 35.0%
CAAAACAAACCAGTCATCAA+GGG + chr7_2:75723714-75723733 None:intergenic 35.0%
TCAAAACAAACCAGTCATCA+AGG + chr7_2:75723715-75723734 None:intergenic 35.0%
!!! CTGGTTTGTTTTGAGTATGA+AGG - chr7_2:75723721-75723740 Msa1077170:intron 35.0%
TTGGAAGAGAACACTTTGTA+GGG + chr7_2:75723789-75723808 None:intergenic 35.0%
TTTGGAAGAGAACACTTTGT+AGG + chr7_2:75723790-75723809 None:intergenic 35.0%
! ACAAAGTGTTCTCTTCCAAA+AGG - chr7_2:75723790-75723809 Msa1077170:intron 35.0%
! CAAAGTGTTCTCTTCCAAAA+GGG - chr7_2:75723791-75723810 Msa1077170:intron 35.0%
! GCATTTTGGACATCCATATT+TGG + chr7_2:75723818-75723837 None:intergenic 35.0%
! ACTATAGAGATGACCACTTT+TGG - chr7_2:75723886-75723905 Msa1077170:intron 35.0%
TATGGTTGTATACATGATGC+AGG - chr7_2:75724173-75724192 Msa1077170:intron 35.0%
AATTCCATAAGGTTCTGCTT+CGG + chr7_2:75724238-75724257 None:intergenic 35.0%
ACAATACGGCAAATTCCATA+AGG + chr7_2:75724249-75724268 None:intergenic 35.0%
CTCAAATTCAGCGAATTGAT+GGG - chr7_2:75724340-75724359 Msa1077170:CDS 35.0%
AAAAGTGATGAAAGTAGCCA+CGG - chr7_2:75724428-75724447 Msa1077170:intron 35.0%
GATCCAGTACTTCAACTATA+AGG - chr7_2:75724587-75724606 Msa1077170:CDS 35.0%
CCATCTGTTGAGAATATTGA+GGG - chr7_2:75724669-75724688 Msa1077170:CDS 35.0%
GAGAATATTGAGGGTGAATA+CGG - chr7_2:75724678-75724697 Msa1077170:CDS 35.0%
TAATTCTGCCACATTGTTCT+AGG - chr7_2:75724812-75724831 Msa1077170:intron 35.0%
AAAATTTCTGTGCAGCTTCA+GGG + chr7_2:75725001-75725020 None:intergenic 35.0%
!! ATTTGGAAGAAGTATCTCGT+TGG - chr7_2:75725274-75725293 Msa1077170:CDS 35.0%
ACCAGATTATCATGCATATC+TGG + chr7_2:75725325-75725344 None:intergenic 35.0%
ATGCACAGATTCACATTGAA+AGG + chr7_2:75725453-75725472 None:intergenic 35.0%
TATGAATAGTCCAACAGAGT+CGG + chr7_2:75725515-75725534 None:intergenic 35.0%
TTGGGACATAATGACTGAAA+GGG + chr7_2:75725549-75725568 None:intergenic 35.0%
GTCCCAACTATTACTATTTC+TGG - chr7_2:75725562-75725581 Msa1077170:intron 35.0%
GAAGCATAGGTTTATCTAAG+AGG - chr7_2:75725795-75725814 Msa1077170:intron 35.0%
GATGTAATGGCATCTTGTTA+AGG - chr7_2:75725879-75725898 Msa1077170:intron 35.0%
TTCGGTTTACATATGCATGA+GGG + chr7_2:75725915-75725934 None:intergenic 35.0%
CTTCAGCTTCCAATATTCTT+TGG - chr7_2:75726026-75726045 Msa1077170:intron 35.0%
!! TTTCTATTTCTGCTCTCTGT+TGG + chr7_2:75726109-75726128 None:intergenic 35.0%
! TTATCCTGCTCAGTATTGAA+GGG - chr7_2:75726269-75726288 Msa1077170:intron 35.0%
TTTCCTGGAACATATCATTC+AGG - chr7_2:75726347-75726366 Msa1077170:intron 35.0%
AATCCTGAATGATATGTTCC+AGG + chr7_2:75726353-75726372 None:intergenic 35.0%
!! TACATATATCGGTTTCCCAT+CGG + chr7_2:75726535-75726554 None:intergenic 35.0%
CAAGATCCCATTTCTTTGAT+AGG + chr7_2:75726594-75726613 None:intergenic 35.0%
! TGTCATCGAATCTAGGATTT+AGG + chr7_2:75726646-75726665 None:intergenic 35.0%
! CTTTTGTGACTTCAAAGAAG+TGG + chr7_2:75726947-75726966 None:intergenic 35.0%
AAGACACACAAACTTGTCAT+CGG + chr7_2:75727058-75727077 None:intergenic 35.0%
!! CACTGATTTCATAACGGTAA+AGG + chr7_2:75727128-75727147 None:intergenic 35.0%
CCGTTATGAAATCAGTGAAT+TGG - chr7_2:75727131-75727150 Msa1077170:CDS 35.0%
!!! TGGGGTTTGTTTTGATTTCT+GGG + chr7_2:75727247-75727266 None:intergenic 35.0%
TGTTTCTCCACCAAAGAATT+TGG + chr7_2:75727369-75727388 None:intergenic 35.0%
!!! TGTGTTCTTTTTTGGGTGAA+TGG + chr7_2:75727451-75727470 None:intergenic 35.0%
GGTCAAAGCTAAAGAGAAAA+TGG - chr7_2:75727500-75727519 Msa1077170:intron 35.0%
CAAAGCTAAAGAGAAAATGG+TGG - chr7_2:75727503-75727522 Msa1077170:intron 35.0%
AAGCTAAAGAGAAAATGGTG+GGG - chr7_2:75727505-75727524 Msa1077170:intron 35.0%
GTAAAGGAAGTAATTCTGCT+GGG - chr7_2:75727553-75727572 Msa1077170:intron 35.0%
TGTTAAGAACAGTGAGTACA+AGG + chr7_2:75727878-75727897 None:intergenic 35.0%
!! GATTTCCGGCTAGTTTAGTT+CGG + chr7_2:75721607-75721626 None:intergenic 40.0%
TTTGTCACTGTATGTGTTGG+TGG + chr7_2:75721656-75721675 None:intergenic 40.0%
GACTTTGTCACTGTATGTGT+TGG + chr7_2:75721659-75721678 None:intergenic 40.0%
TGACACTTAACATGAACGGA+GGG + chr7_2:75722096-75722115 None:intergenic 40.0%
ATCTCAGGTTTAGTCGATGT+GGG + chr7_2:75722505-75722524 None:intergenic 40.0%
GCATCCTCCTATGACTAAAT+TGG - chr7_2:75722618-75722637 Msa1077170:CDS 40.0%
GCGATGCATTAGCAAAAGTA+CGG - chr7_2:75722695-75722714 Msa1077170:intron 40.0%
ACAATTGATATGTCCTCAGG+CGG - chr7_2:75722811-75722830 Msa1077170:intron 40.0%
CAACTTATAATTAGGGACGG+AGG + chr7_2:75723087-75723106 None:intergenic 40.0%
! CGACTTATAATTTGGGATGG+AGG - chr7_2:75723317-75723336 Msa1077170:intron 40.0%
CATGTCTCTTTAAGCAGAGT+CGG - chr7_2:75723495-75723514 Msa1077170:intron 40.0%
! ACCTTTAAACCCTTGATGAC+TGG - chr7_2:75723702-75723721 Msa1077170:intron 40.0%
ACCAGTCATCAAGGGTTTAA+AGG + chr7_2:75723706-75723725 None:intergenic 40.0%
TGGAAGAGAACACTTTGTAG+GGG + chr7_2:75723788-75723807 None:intergenic 40.0%
CTTCCAAAAGGGACCAAATA+TGG - chr7_2:75723802-75723821 Msa1077170:intron 40.0%
! CATCCATATTTGGTCCCTTT+TGG + chr7_2:75723808-75723827 None:intergenic 40.0%
TCTTCTGTTGGACGGAAAAT+AGG + chr7_2:75723994-75724013 None:intergenic 40.0%
! TATTTTCCGTCCAACAGAAG+AGG - chr7_2:75723993-75724012 Msa1077170:intron 40.0%
TACATGCTATCACGCTTAAG+TGG + chr7_2:75724025-75724044 None:intergenic 40.0%
GCTCAAATTCAGCGAATTGA+TGG - chr7_2:75724339-75724358 Msa1077170:CDS 40.0%
TGAGAGCTAGTCATAACTTC+CGG + chr7_2:75724384-75724403 None:intergenic 40.0%
!!! GTTGAAGTACTTTTAGGACC+AGG + chr7_2:75724474-75724493 None:intergenic 40.0%
GAAGGTTAAAGACTGTGACA+AGG - chr7_2:75724503-75724522 Msa1077170:intron 40.0%
! TTGAGACTGAATTTAGGACC+AGG + chr7_2:75724537-75724556 None:intergenic 40.0%
GCCATCTGTTGAGAATATTG+AGG - chr7_2:75724668-75724687 Msa1077170:CDS 40.0%
CCCTCAATATTCTCAACAGA+TGG + chr7_2:75724672-75724691 None:intergenic 40.0%
AATAATATGCGTTCACTCCC+AGG - chr7_2:75724954-75724973 Msa1077170:CDS 40.0%
GAAAATTTCTGTGCAGCTTC+AGG + chr7_2:75725002-75725021 None:intergenic 40.0%
! TGCACAGAAATTTTCCCCTA+GGG - chr7_2:75725007-75725026 Msa1077170:CDS 40.0%
ATTTGGGTGAACCCAAAGTA+TGG - chr7_2:75725212-75725231 Msa1077170:CDS 40.0%
AGTCAACAGAACATCTTCCT+GGG + chr7_2:75725246-75725265 None:intergenic 40.0%
AAGTCAACAGAACATCTTCC+TGG + chr7_2:75725247-75725266 None:intergenic 40.0%
GCCAGATATGCATGATAATC+TGG - chr7_2:75725321-75725340 Msa1077170:CDS 40.0%
GTTGGGACATAATGACTGAA+AGG + chr7_2:75725550-75725569 None:intergenic 40.0%
! GCACTCAAAAAAGGAAGCAT+AGG - chr7_2:75725782-75725801 Msa1077170:CDS 40.0%
GTTCGGTTTACATATGCATG+AGG + chr7_2:75725916-75725935 None:intergenic 40.0%
CAAACAATGAGCAGAAGGTT+CGG + chr7_2:75725933-75725952 None:intergenic 40.0%
AATGAACATGGCATTGTGCA+AGG + chr7_2:75725968-75725987 None:intergenic 40.0%
TGCTCTCTGTTGGATATTGA+TGG + chr7_2:75726099-75726118 None:intergenic 40.0%
AACGCACTCAATTCTATGTG+TGG - chr7_2:75726138-75726157 Msa1077170:intron 40.0%
ACGCACTCAATTCTATGTGT+GGG - chr7_2:75726139-75726158 Msa1077170:intron 40.0%
! GTTATCCTGCTCAGTATTGA+AGG - chr7_2:75726268-75726287 Msa1077170:intron 40.0%
TACTGAATACACCGATACAC+TGG + chr7_2:75726305-75726324 None:intergenic 40.0%
AAGACAAGAACAAACTCACG+AGG + chr7_2:75726329-75726348 None:intergenic 40.0%
! GAGTTTGTTCTTGTCTTTCC+TGG - chr7_2:75726332-75726351 Msa1077170:intron 40.0%
TTGTGGTTTCAACTGTTCTG+AGG - chr7_2:75726376-75726395 Msa1077170:intron 40.0%
TTCATACGACAAGCTGTTAC+TGG - chr7_2:75726484-75726503 Msa1077170:intron 40.0%
TCATACGACAAGCTGTTACT+GGG - chr7_2:75726485-75726504 Msa1077170:intron 40.0%
!! ACATATATCGGTTTCCCATC+GGG + chr7_2:75726534-75726553 None:intergenic 40.0%
TTCATTCTTGCGTATGGATC+TGG - chr7_2:75726813-75726832 Msa1077170:intron 40.0%
TCAGGAGTGAAAGTTTGAAG+AGG - chr7_2:75726911-75726930 Msa1077170:intron 40.0%
ACTTCACTGCCAGTTGTAAA+AGG - chr7_2:75726977-75726996 Msa1077170:CDS 40.0%
CTTCACTGCCAGTTGTAAAA+GGG - chr7_2:75726978-75726997 Msa1077170:CDS 40.0%
! GCTACATTCCCTTTTACAAC+TGG + chr7_2:75726989-75727008 None:intergenic 40.0%
GATTTATTCCTGTCTGCTGT+TGG - chr7_2:75727021-75727040 Msa1077170:CDS 40.0%
!! AACAGCTTTGTTCTTGTCCT+TGG - chr7_2:75727088-75727107 Msa1077170:CDS 40.0%
!! GTTCTTCATCAAGCTTTGGA+TGG - chr7_2:75727156-75727175 Msa1077170:exon 40.0%
AAATGGGCCAAAGAAGATCT+TGG - chr7_2:75727198-75727217 Msa1077170:five_prime_UTR 40.0%
!!! GGTTTGTTTTGATTTCTGGG+AGG + chr7_2:75727244-75727263 None:intergenic 40.0%
!!! CTGGGGTTTGTTTTGATTTC+TGG + chr7_2:75727248-75727267 None:intergenic 40.0%
GACTACTGTGAGTACTACTA+GGG + chr7_2:75727422-75727441 None:intergenic 40.0%
!!! TTTTTTGGGTGAATGGCGTA+CGG + chr7_2:75727444-75727463 None:intergenic 40.0%
! ATGCTTGTTGCAGCAGATTT+GGG + chr7_2:75727531-75727550 None:intergenic 40.0%
! AATGCTTGTTGCAGCAGATT+TGG + chr7_2:75727532-75727551 None:intergenic 40.0%
AAATCTGCTGCAACAAGCAT+TGG - chr7_2:75727531-75727550 Msa1077170:intron 40.0%
GGTAAAGGAAGTAATTCTGC+TGG - chr7_2:75727552-75727571 Msa1077170:intron 40.0%
AAACCTGATAGCAAGGCAAT+TGG - chr7_2:75727579-75727598 Msa1077170:intron 40.0%
AACCTGATAGCAAGGCAATT+GGG - chr7_2:75727580-75727599 Msa1077170:intron 40.0%
GAAGTTTCTTCATCAACTCC+AGG - chr7_2:75727648-75727667 Msa1077170:intron 40.0%
TAGTTCTTCAGAATCCGATG+AGG - chr7_2:75727722-75727741 Msa1077170:intron 40.0%
AGCTGTAAAGTACAGGATTC+AGG + chr7_2:75727948-75727967 None:intergenic 40.0%
ACAGAAGCAGAACTGGTATA+AGG + chr7_2:75727975-75727994 None:intergenic 40.0%
CAATGGACCTGGAATACAAT+TGG + chr7_2:75728001-75728020 None:intergenic 40.0%
TAACGGGGAAGAAACAACAA+TGG + chr7_2:75728018-75728037 None:intergenic 40.0%
TCTCACCGAACTAAACTAGC+CGG - chr7_2:75721599-75721618 Msa1077170:three_prime_UTR 45.0%
ACTAAACTAGCCGGAAATCG+CGG - chr7_2:75721608-75721627 Msa1077170:three_prime_UTR 45.0%
! TCACTGTATGTGTTGGTGGA+CGG + chr7_2:75721652-75721671 None:intergenic 45.0%
AGTGACAAAGTCTGCCCTTA+AGG - chr7_2:75721667-75721686 Msa1077170:three_prime_UTR 45.0%
! TCTGCCCTTAAGGTTTTCCA+GGG - chr7_2:75721677-75721696 Msa1077170:three_prime_UTR 45.0%
GTTGCCCTGGAAAACCTTAA+GGG + chr7_2:75721684-75721703 None:intergenic 45.0%
CCTACCTGTGTTGTCAATGT+CGG + chr7_2:75721752-75721771 None:intergenic 45.0%
GTGACACTTAACATGAACGG+AGG + chr7_2:75722097-75722116 None:intergenic 45.0%
TGTCACATCTGTGTTGTGCA+TGG - chr7_2:75722111-75722130 Msa1077170:CDS 45.0%
GATGTTAGGGATGCAAAACC+AGG + chr7_2:75722439-75722458 None:intergenic 45.0%
GTTTAGTCGATGTGGGGATT+GGG + chr7_2:75722498-75722517 None:intergenic 45.0%
TCTCAGGTTTAGTCGATGTG+GGG + chr7_2:75722504-75722523 None:intergenic 45.0%
CATCTCAGGTTTAGTCGATG+TGG + chr7_2:75722506-75722525 None:intergenic 45.0%
! CACATCGACTAAACCTGAGA+TGG - chr7_2:75722504-75722523 Msa1077170:CDS 45.0%
TCGACTAAACCTGAGATGGA+TGG - chr7_2:75722508-75722527 Msa1077170:CDS 45.0%
!! GAAGTATTGCCATCCATCTC+AGG + chr7_2:75722520-75722539 None:intergenic 45.0%
CTCTGGTCGGATATTATCCA+TGG + chr7_2:75722568-75722587 None:intergenic 45.0%
AGGTTTACACTTGCTCTGGT+CGG + chr7_2:75722581-75722600 None:intergenic 45.0%
ATGTGCTTGTGTGATGTGTC+TGG - chr7_2:75722950-75722969 Msa1077170:intron 45.0%
!! GTTAGTCTAAGAGCGTTGTC+AGG - chr7_2:75723458-75723477 Msa1077170:intron 45.0%
AACACTTTGTAGGGGGTTTC+TGG + chr7_2:75723780-75723799 None:intergenic 45.0%
GGAAGAGAACACTTTGTAGG+GGG + chr7_2:75723787-75723806 None:intergenic 45.0%
ACTTCTCTTCTTGCATCCTC+AGG + chr7_2:75723958-75723977 None:intergenic 45.0%
GGATGCAAGAAGAGAAGTTC+TGG - chr7_2:75723960-75723979 Msa1077170:intron 45.0%
TAGGTACCTCTTCTGTTGGA+CGG + chr7_2:75724002-75724021 None:intergenic 45.0%
TGCTATCACGCTTAAGTGGT+AGG + chr7_2:75724021-75724040 None:intergenic 45.0%
AGCTAGTAGGAGGGACAATA+CGG + chr7_2:75724263-75724282 None:intergenic 45.0%
AGCCAGACATCAACAGCAAT+GGG - chr7_2:75724644-75724663 Msa1077170:CDS 45.0%
GCAGAGAACCTAGAACAATG+TGG + chr7_2:75724823-75724842 None:intergenic 45.0%
GGATCAGAAATCGCTGGAAT+TGG + chr7_2:75724885-75724904 None:intergenic 45.0%
TTCAGAGGATCAGAAATCGC+TGG + chr7_2:75724891-75724910 None:intergenic 45.0%
AGCGATTTCTGATCCTCTGA+AGG - chr7_2:75724890-75724909 Msa1077170:CDS 45.0%
GGATAATTGCATGCCTTCAG+AGG + chr7_2:75724906-75724925 None:intergenic 45.0%
CAAAGGAAAGAAGGGAACCT+GGG + chr7_2:75724974-75724993 None:intergenic 45.0%
TCAAAGGAAAGAAGGGAACC+TGG + chr7_2:75724975-75724994 None:intergenic 45.0%
AGGGCTGTCAAAGGAAAGAA+GGG + chr7_2:75724982-75725001 None:intergenic 45.0%
! CTGCACAGAAATTTTCCCCT+AGG - chr7_2:75725006-75725025 Msa1077170:CDS 45.0%
! ATTTTCCCCTAGGGTACATG+TGG - chr7_2:75725016-75725035 Msa1077170:CDS 45.0%
! TTTTCCCCTAGGGTACATGT+GGG - chr7_2:75725017-75725036 Msa1077170:CDS 45.0%
ACATTCCCACATGTACCCTA+GGG + chr7_2:75725025-75725044 None:intergenic 45.0%
! TGTGCTTTTCACCACTCAGA+TGG - chr7_2:75725042-75725061 Msa1077170:CDS 45.0%
! GTGCTTTTCACCACTCAGAT+GGG - chr7_2:75725043-75725062 Msa1077170:CDS 45.0%
AATGGCATTACCCATCTGAG+TGG + chr7_2:75725056-75725075 None:intergenic 45.0%
GGTGAACCCAAAGTATGGTA+TGG - chr7_2:75725217-75725236 Msa1077170:CDS 45.0%
GGGACACCATACCATACTTT+GGG + chr7_2:75725226-75725245 None:intergenic 45.0%
TGGGACACCATACCATACTT+TGG + chr7_2:75725227-75725246 None:intergenic 45.0%
AAAGTATGGTATGGTGTCCC+AGG - chr7_2:75725226-75725245 Msa1077170:CDS 45.0%
! TAGATGGATTCCGACTCTGT+TGG - chr7_2:75725502-75725521 Msa1077170:intron 45.0%
GGGCAATGAGCACTCAAAAA+AGG - chr7_2:75725773-75725792 Msa1077170:CDS 45.0%
AGGGTCAAACAATGAGCAGA+AGG + chr7_2:75725938-75725957 None:intergenic 45.0%
TTCTGCTCATTGTTTGACCC+TGG - chr7_2:75725937-75725956 Msa1077170:intron 45.0%
! CATTGTGCAAGGCATTACCA+GGG + chr7_2:75725957-75725976 None:intergenic 45.0%
! GCGGGTCTTGTAAATGAACA+TGG + chr7_2:75725980-75725999 None:intergenic 45.0%
! TGCTCAGTATTGAAGGGAGA+GGG - chr7_2:75726275-75726294 Msa1077170:intron 45.0%
! GAGAGGGTATACCAGTGTAT+CGG - chr7_2:75726291-75726310 Msa1077170:intron 45.0%
! CAAGTTTTGCTCCTCTTGAG+TGG - chr7_2:75726402-75726421 Msa1077170:intron 45.0%
ACAAACTTGTCATCGGAGCA+CGG + chr7_2:75727051-75727070 None:intergenic 45.0%
CTTTGTTCTTGTCCTTGGAC+AGG - chr7_2:75727093-75727112 Msa1077170:CDS 45.0%
GGAGGTTCTTCATCAAGCTT+TGG - chr7_2:75727152-75727171 Msa1077170:CDS 45.0%
! TTGATTTCTGGGAGGCAACT+GGG + chr7_2:75727236-75727255 None:intergenic 45.0%
! TTTGATTTCTGGGAGGCAAC+TGG + chr7_2:75727237-75727256 None:intergenic 45.0%
GCAGGCAACACCAAATTCTT+TGG - chr7_2:75727356-75727375 Msa1077170:intron 45.0%
GGCAACACCAAATTCTTTGG+TGG - chr7_2:75727359-75727378 Msa1077170:intron 45.0%
GGACTACTGTGAGTACTACT+AGG + chr7_2:75727423-75727442 None:intergenic 45.0%
!! GCTGCAACAAGCATTGGTAA+AGG - chr7_2:75727537-75727556 Msa1077170:intron 45.0%
TGGGATCAAACCTGATAGCA+AGG - chr7_2:75727572-75727591 Msa1077170:intron 45.0%
ACCTGATAGCAAGGCAATTG+GGG - chr7_2:75727581-75727600 Msa1077170:intron 45.0%
AAAGACAAGAAACGTGAGCC+TGG + chr7_2:75727669-75727688 None:intergenic 45.0%
AGGCGAAAGCTGTAAAGTAC+AGG + chr7_2:75727955-75727974 None:intergenic 45.0%
CTGTGAGCCAATTGTATTCC+AGG - chr7_2:75727991-75728010 Msa1077170:five_prime_UTR 45.0%
GGAAGAAACAACAATGGACC+TGG + chr7_2:75728012-75728031 None:intergenic 45.0%
!! TTAAATATAAAAAAACAAAT+GGG + chr7_2:75725419-75725438 None:intergenic 5.0%
! TGTATGTGTTGGTGGACGGA+CGG + chr7_2:75721648-75721667 None:intergenic 50.0%
! GTCTGCCCTTAAGGTTTTCC+AGG - chr7_2:75721676-75721695 Msa1077170:three_prime_UTR 50.0%
CGTTGCCCTGGAAAACCTTA+AGG + chr7_2:75721685-75721704 None:intergenic 50.0%
! TGCACCGACATTGACAACAC+AGG - chr7_2:75721745-75721764 Msa1077170:three_prime_UTR 50.0%
CCGACATTGACAACACAGGT+AGG - chr7_2:75721749-75721768 Msa1077170:three_prime_UTR 50.0%
! GGCTTTTGCTACAGCGATGA+TGG - chr7_2:75722354-75722373 Msa1077170:CDS 50.0%
! AGATTTTCCTCGATTCCGCC+TGG - chr7_2:75722418-75722437 Msa1077170:CDS 50.0%
GTTAGGGATGCAAAACCAGG+CGG + chr7_2:75722436-75722455 None:intergenic 50.0%
GGTTTAGTCGATGTGGGGAT+TGG + chr7_2:75722499-75722518 None:intergenic 50.0%
AGATTTGTGCACTACGGCCA+TGG - chr7_2:75722548-75722567 Msa1077170:CDS 50.0%
CCTCAGGTTTACACTTGCTC+TGG + chr7_2:75722585-75722604 None:intergenic 50.0%
CCAGAGCAAGTGTAAACCTG+AGG - chr7_2:75722582-75722601 Msa1077170:CDS 50.0%
ATTGATATGTCCTCAGGCGG+TGG - chr7_2:75722814-75722833 Msa1077170:intron 50.0%
TTGATATGTCCTCAGGCGGT+GGG - chr7_2:75722815-75722834 Msa1077170:intron 50.0%
!!! TTTTAGTTTCCCACCGCCTG+AGG + chr7_2:75722827-75722846 None:intergenic 50.0%
GTGTGATGTGTCTGGTGATC+TGG - chr7_2:75722958-75722977 Msa1077170:intron 50.0%
TGTGTCTGGTGATCTGGCAT+AGG - chr7_2:75722964-75722983 Msa1077170:CDS 50.0%
! TCTGGAACCAGGTAACAGCA+AGG - chr7_2:75723926-75723945 Msa1077170:intron 50.0%
GTGGTAGGTACCTCTTCTGT+TGG + chr7_2:75724006-75724025 None:intergenic 50.0%
CGTTCCGAAGCAGAACCTTA+TGG - chr7_2:75724231-75724250 Msa1077170:intron 50.0%
GTATTGTCCCTCCTACTAGC+TGG - chr7_2:75724262-75724281 Msa1077170:CDS 50.0%
GCACCAAGTTCAGTATGCAC+CGG - chr7_2:75724362-75724381 Msa1077170:CDS 50.0%
CTTCCGGTGCATACTGAACT+TGG + chr7_2:75724368-75724387 None:intergenic 50.0%
GATGAAAGTAGCCACGGACA+AGG - chr7_2:75724434-75724453 Msa1077170:intron 50.0%
!!! GTACTTTTAGGACCAGGCTC+AGG + chr7_2:75724468-75724487 None:intergenic 50.0%
! CTGAATTTAGGACCAGGCTC+AGG + chr7_2:75724531-75724550 None:intergenic 50.0%
CAGCCAGACATCAACAGCAA+TGG - chr7_2:75724643-75724662 Msa1077170:CDS 50.0%
! CTCCCATTGCTGTTGATGTC+TGG + chr7_2:75724649-75724668 None:intergenic 50.0%
GGTTCTCTGCTGTGACACTT+TGG - chr7_2:75724833-75724852 Msa1077170:intron 50.0%
TCTCTGCTGTGACACTTTGG+AGG - chr7_2:75724836-75724855 Msa1077170:intron 50.0%
!! GAGGCTGGAGATTTTAGCAG+TGG - chr7_2:75724855-75724874 Msa1077170:CDS 50.0%
CAGGGCTGTCAAAGGAAAGA+AGG + chr7_2:75724983-75725002 None:intergenic 50.0%
CATTCCCACATGTACCCTAG+GGG + chr7_2:75725024-75725043 None:intergenic 50.0%
CACATTCCCACATGTACCCT+AGG + chr7_2:75725026-75725045 None:intergenic 50.0%
GGAGTGCGAGATATGTATGC+AGG - chr7_2:75725295-75725314 Msa1077170:CDS 50.0%
! GCATTGTGCAAGGCATTACC+AGG + chr7_2:75725958-75725977 None:intergenic 50.0%
CTCTCCCTTCAATACTGAGC+AGG + chr7_2:75726276-75726295 None:intergenic 50.0%
! CTGCTCAGTATTGAAGGGAG+AGG - chr7_2:75726274-75726293 Msa1077170:intron 50.0%
CCATGAAGCAACCACTCAAG+AGG + chr7_2:75726416-75726435 None:intergenic 50.0%
CCTCTTGAGTGGTTGCTTCA+TGG - chr7_2:75726413-75726432 Msa1077170:intron 50.0%
CCTGATACGAGACTACACAG+AGG + chr7_2:75726896-75726915 None:intergenic 50.0%
CCTCTGTGTAGTCTCGTATC+AGG - chr7_2:75726893-75726912 Msa1077170:intron 50.0%
AGGAGAATTCTGCCTGTCCA+AGG + chr7_2:75727108-75727127 None:intergenic 50.0%
GTGGAAACAGCGTAAATCGC+AGG - chr7_2:75727338-75727357 Msa1077170:intron 50.0%
GGTGGAGAAACAGAGCGAAA+TGG - chr7_2:75727377-75727396 Msa1077170:intron 50.0%
AGTACTACTAGGGATCCGCT+TGG + chr7_2:75727412-75727431 None:intergenic 50.0%
! TCCCCAATTGCCTTGCTATC+AGG + chr7_2:75727585-75727604 None:intergenic 50.0%
TTGGCTCACAGAAGCAGAAC+TGG + chr7_2:75727982-75728001 None:intergenic 50.0%
GGAACACTTGCCGCGATTTC+CGG + chr7_2:75721621-75721640 None:intergenic 55.0%
TGCAAAACCAGGCGGAATCG+AGG + chr7_2:75722428-75722447 None:intergenic 55.0%
TGCTCAGTGCGAGATTCCTC+AGG + chr7_2:75722601-75722620 None:intergenic 55.0%
GGAACCAGGTAACAGCAAGG+TGG - chr7_2:75723929-75723948 Msa1077170:intron 55.0%
GCGGTTTCCAGCTAGTAGGA+GGG + chr7_2:75724272-75724291 None:intergenic 55.0%
CATGGCGGTTTCCAGCTAGT+AGG + chr7_2:75724276-75724295 None:intergenic 55.0%
TTAGGACCAGGCTCAGGCTT+GGG + chr7_2:75724462-75724481 None:intergenic 55.0%
! TTTAGGACCAGGCTCAGGCT+TGG + chr7_2:75724463-75724482 None:intergenic 55.0%
! TGCTGTGACACTTTGGAGGC+TGG - chr7_2:75724840-75724859 Msa1077170:intron 55.0%
TGCAGCTTCAGGGCTGTCAA+AGG + chr7_2:75724991-75725010 None:intergenic 55.0%
AGCTGTTACTGGGAGCAGCT+AGG - chr7_2:75726495-75726514 Msa1077170:intron 55.0%
GCTGTTACTGGGAGCAGCTA+GGG - chr7_2:75726496-75726515 Msa1077170:intron 55.0%
ACGGACAACCAACAGCAGAC+AGG + chr7_2:75727032-75727051 None:intergenic 55.0%
CGCGCGATGCATACAACAAG+TGG - chr7_2:75727319-75727338 Msa1077170:intron 55.0%
AAATGGCCTCCCAAGCCAAG+CGG - chr7_2:75727394-75727413 Msa1077170:intron 55.0%
ACTAGGGATCCGCTTGGCTT+GGG + chr7_2:75727406-75727425 None:intergenic 55.0%
TACTAGGGATCCGCTTGGCT+TGG + chr7_2:75727407-75727426 None:intergenic 55.0%
! ATGTGTTGGTGGACGGACGG+AGG + chr7_2:75721645-75721664 None:intergenic 60.0%
TGCTGCGACGCGGTTATCTG+CGG + chr7_2:75721708-75721727 None:intergenic 60.0%
! AGCTCTGATCTGCTGCGACG+CGG + chr7_2:75721718-75721737 None:intergenic 60.0%
!! GACGCCACCTTGCTGTTACC+TGG + chr7_2:75723936-75723955 None:intergenic 60.0%
AACAGCAAGGTGGCGTCCTG+AGG - chr7_2:75723939-75723958 Msa1077170:intron 60.0%
GGCGGTTTCCAGCTAGTAGG+AGG + chr7_2:75724273-75724292 None:intergenic 60.0%
TGTGACAAGGAGCCTGAGCC+TGG - chr7_2:75724516-75724535 Msa1077170:intron 60.0%
GAGCAGCTAGGGAAGCTGTG+AGG - chr7_2:75726507-75726526 Msa1077170:intron 60.0%
GGAAGCTGTGAGGACCCGAT+GGG - chr7_2:75726517-75726536 Msa1077170:intron 60.0%
!! TCGCGCGCCGACTGCAATAT+AGG + chr7_2:75727306-75727325 None:intergenic 60.0%
! TGTTGGTGGACGGACGGAGG+AGG + chr7_2:75721642-75721661 None:intergenic 65.0%
GGTTATCTGCGGCGTTGCCC+TGG + chr7_2:75721697-75721716 None:intergenic 65.0%
AGGCTTGGGCTCCTTGTCCG+TGG + chr7_2:75724448-75724467 None:intergenic 65.0%
AAGGAGCCCAAGCCTGAGCC+TGG - chr7_2:75724453-75724472 Msa1077170:intron 65.0%
GGGAAGCTGTGAGGACCCGA+TGG - chr7_2:75726516-75726535 Msa1077170:intron 65.0%
!! AGGGATCCGCTTGGCTTGGG+AGG + chr7_2:75727403-75727422 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 75721543 75728045 75721543 ID=Msa1077170;Name=Msa1077170
chr7_2 mRNA 75721543 75728045 75721543 ID=Msa1077170-mRNA-1;Parent=Msa1077170;Name=Msa1077170-mRNA-1;_AED=0.05;_eAED=0.05;_QI=271|1|1|1|0.87|0.88|9|296|843
chr7_2 exon 75721543 75722684 75721543 ID=Msa1077170-mRNA-1:exon:18133;Parent=Msa1077170-mRNA-1
chr7_2 exon 75722960 75723328 75722960 ID=Msa1077170-mRNA-1:exon:18132;Parent=Msa1077170-mRNA-1
chr7_2 exon 75724246 75724416 75724246 ID=Msa1077170-mRNA-1:exon:18131;Parent=Msa1077170-mRNA-1
chr7_2 exon 75724524 75724754 75724524 ID=Msa1077170-mRNA-1:exon:18130;Parent=Msa1077170-mRNA-1
chr7_2 exon 75724854 75725393 75724854 ID=Msa1077170-mRNA-1:exon:18129;Parent=Msa1077170-mRNA-1
chr7_2 exon 75725574 75725651 75725574 ID=Msa1077170-mRNA-1:exon:18128;Parent=Msa1077170-mRNA-1
chr7_2 exon 75725736 75725807 75725736 ID=Msa1077170-mRNA-1:exon:18127;Parent=Msa1077170-mRNA-1
chr7_2 exon 75726949 75727220 75726949 ID=Msa1077170-mRNA-1:exon:18126;Parent=Msa1077170-mRNA-1
chr7_2 exon 75727822 75728045 75727822 ID=Msa1077170-mRNA-1:exon:18125;Parent=Msa1077170-mRNA-1
chr7_2 five_prime_UTR 75727822 75728045 75727822 ID=Msa1077170-mRNA-1:five_prime_utr;Parent=Msa1077170-mRNA-1
chr7_2 five_prime_UTR 75727174 75727220 75727174 ID=Msa1077170-mRNA-1:five_prime_utr;Parent=Msa1077170-mRNA-1
chr7_2 CDS 75726949 75727173 75726949 ID=Msa1077170-mRNA-1:cds;Parent=Msa1077170-mRNA-1
chr7_2 CDS 75725736 75725807 75725736 ID=Msa1077170-mRNA-1:cds;Parent=Msa1077170-mRNA-1
chr7_2 CDS 75725574 75725651 75725574 ID=Msa1077170-mRNA-1:cds;Parent=Msa1077170-mRNA-1
chr7_2 CDS 75724854 75725393 75724854 ID=Msa1077170-mRNA-1:cds;Parent=Msa1077170-mRNA-1
chr7_2 CDS 75724524 75724754 75724524 ID=Msa1077170-mRNA-1:cds;Parent=Msa1077170-mRNA-1
chr7_2 CDS 75724246 75724416 75724246 ID=Msa1077170-mRNA-1:cds;Parent=Msa1077170-mRNA-1
chr7_2 CDS 75722960 75723328 75722960 ID=Msa1077170-mRNA-1:cds;Parent=Msa1077170-mRNA-1
chr7_2 CDS 75721839 75722684 75721839 ID=Msa1077170-mRNA-1:cds;Parent=Msa1077170-mRNA-1
chr7_2 three_prime_UTR 75721543 75721838 75721543 ID=Msa1077170-mRNA-1:three_prime_utr;Parent=Msa1077170-mRNA-1
Gene Sequence

>Msa1077170

ATGAGATTTTCCTCGATTCCGCCTGGTTTTGCATCCCTAACATCTTTTTATCTAAAAAAGGATGACAATGTTAAGTCGGACCCAATCCCCACATCGACTAAACCTGAGATGGATGGCAATACTTCTAATAAACAGATTTGTGCACTACGGCCATGGATAATATCCGACCAGAGCAAGTGTAAACCTGAGGAATCTCGCACTGAGCATCCTCCTATGACTAAATTGAAACCCCCTACAAAGTGTTCTCTTCCAAAAGGGACCAAATATGGATGTCCAAAATGCAGTAATTGTTTTAAGGTAACAGCAAGGTGGCGTCCTGAGGATGCAAGAAGAGAAGTTCTGGAAGAAGCTCCTATTTTCCGTCCAACAGAAGAGGAATTCAAAGACACGATTAACTATATCGCAAGCATACGTTCCGAAGCAGAACCTTATGGAATTTGCCGTATTGTCCCTCCTACTAGCTGGAAACCGCCATGTACTCTTGAAAAAAAGAATGTATGGGAAAAATCTGAATTTATTGCTCAAATTCAGCGAATTGATGGGCACCAAGTTCAGTATGCACCGGAAGTTATGACTAGCTCTCATGATACTACAGAAACCAAGAGAAGAAAAGTGATGAAAGTAGCCACGGACAAGGAGCCCAAGCCTGAGCCTGGTCCTAAAAGTACTTCAACTAATAATGGGAAGGTTAAAGACTGTGACAAGGAGCCTGAGCCTGGTCCTAAATTCAGTCTCAAAACTTTTAAGAAATTGGCAGATGAATTCAAGATCCAGTACTTCAACTATAAGGATAAGAATAAGATTATGGGTTCTGGTAAAAATTCAGCCAGACATCAACAGCAATGGGAGCCATCTGTTGAGAATATTGAGGGTGAATACGGACGAATTGCTCAAAATCCAACTGATGAAATTGAGGTTCTCTGCTGTGACACTTTGGAGGCTGGAGATTTTAGCAGTGGATTTCCAATTCCAGCGATTTCTGATCCTCTGAAGGCATGCAATTATCCTGAATATTTAAAATCTGGATGGAACTTAAATAATATGCGTTCACTCCCAGGTTCCCTTCTTTCCTTTGACAGCCCTGAAGCTGCACAGAAATTTTCCCCTAGGGTACATGTGGGAATGTGCTTTTCACCACTCAGATGGAAAGTTGAAGAGCACCAATTATACTCATTATATTACATGCATTTGGGTGAACCCAAAGTATGGTATGGTGTCCCAGGAAGATGTTCTGTTGACTTTGAAACAATTTGGAAGAAGTATCTCGTTGGAGTGCGAGATATGTATGCAGGACAGCCAGATATGCATGATAATCTGGTTATGCAGTTATCCTGCTCAGTATTGAAGGGAGAGGGTATACCAGTGTATCGGTGTATTCAGTATCCTCGTGAGTTTGTTCTTGTCTTTCCTGGAACATATCATTCAGGATTTGATTGTGGTTTCAACTGTTCTGAGGCAGCAAGTTTTGCTCCTCTTGAGTGGTTGCTTCATGGACAGAATGTTGTAGACCTATATAGTGAACAGAAGAGAAAAACTTTAATTTCATACGACAAGCTGTTACTGGGAGCAGCTAGGGAAGCTGTGAGGACCCGATGGGAAACCGATATATGTATGAAGAGCACACCCGACAACATAACATGTAAAGATGCCTATCAAAGAAATGGGATCTTGACAAAAGCTTTTAATTCTCGTATCAGGAGTGAAAGTTTGAAGAGGAAATTTATTTCCACTTCTTTGAAGTCACAAAAGATGGATGAAAACTTCACTGCCAGTTGTAAAAGGGAATGTAGCGTATGTCTGCGTGATTTATTCCTGTCTGCTGTTGGTTGTCCGTGCTCCGATGACAAGTTTGTGTGTCTTGATCATGCAAAACAGCTTTGTTCTTGTCCTTGGACAGGCAGAATTCTCCTTTACCGTTATGAAATCAGTGAATTGGAGGTTCTTCATCAAGCTTTGGATGGAAAACTAAGTGCAGTCTATAAATGGGCCAAAGAAGATCTTGGTTTAACTGTGCGCCCAGTTGCCTCCCAGAAATCAAAACAAACCCCAGAAAAAGTAAATGATTCAGAAGACTCGATAAAAGAACCTATATTGCAGTCGGCGCGCGATGCATACAACAAGTGGAAACAGCGTAAATCGCAGGCAACACCAAATTCTTTGGTGGAGAAACAGAGCGAAATGGCCTCCCAAGCCAAGCGGATCCCTAGTAGTACTCACAGTAGTCCGTACGCCATTCACCCAAAAAAGAACACAACTTTACTTCATTCAGCAATATCAAATGAGGTCAAAGCTAAAGAGAAAATGGTGGGGCCCAAATCTGCTGCAACAAGCATTGGTAAAGGAAGTAATTCTGCTGGGATCAAACCTGATAGCAAGGCAATTGGGGATAAGCTCACAATTTCAAAGAAAGTAGGAGACCCAAAAGTTTCTGAAGTTTCTTCATCAACTCCAGGCTCACGTTTCTTGTCTTTACTACAAGAGAACATTTGGATTGATGTTTCATCTAGTTCTTCAGAATCCGATGAGGACTAG
Protein sequence

>Msa1077170

MRFSSIPPGFASLTSFYLKKDDNVKSDPIPTSTKPEMDGNTSNKQICALRPWIISDQSKCKPEESRTEHPPMTKLKPPTKCSLPKGTKYGCPKCSNCFKVTARWRPEDARREVLEEAPIFRPTEEEFKDTINYIASIRSEAEPYGICRIVPPTSWKPPCTLEKKNVWEKSEFIAQIQRIDGHQVQYAPEVMTSSHDTTETKRRKVMKVATDKEPKPEPGPKSTSTNNGKVKDCDKEPEPGPKFSLKTFKKLADEFKIQYFNYKDKNKIMGSGKNSARHQQQWEPSVENIEGEYGRIAQNPTDEIEVLCCDTLEAGDFSSGFPIPAISDPLKACNYPEYLKSGWNLNNMRSLPGSLLSFDSPEAAQKFSPRVHVGMCFSPLRWKVEEHQLYSLYYMHLGEPKVWYGVPGRCSVDFETIWKKYLVGVRDMYAGQPDMHDNLVMQLSCSVLKGEGIPVYRCIQYPREFVLVFPGTYHSGFDCGFNCSEAASFAPLEWLLHGQNVVDLYSEQKRKTLISYDKLLLGAAREAVRTRWETDICMKSTPDNITCKDAYQRNGILTKAFNSRIRSESLKRKFISTSLKSQKMDENFTASCKRECSVCLRDLFLSAVGCPCSDDKFVCLDHAKQLCSCPWTGRILLYRYEISELEVLHQALDGKLSAVYKWAKEDLGLTVRPVASQKSKQTPEKVNDSEDSIKEPILQSARDAYNKWKQRKSQATPNSLVEKQSEMASQAKRIPSSTHSSPYAIHPKKNTTLLHSAISNEVKAKEKMVGPKSAATSIGKGSNSAGIKPDSKAIGDKLTISKKVGDPKVSEVSSSTPGSRFLSLLQENIWIDVSSSSSESDED*