Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080360 | XP_024625398.1 | 95.399 | 326 | 15 | 0 | 1 | 326 | 1 | 326 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080360 | sp|Q8K4F5|ABHDB_MOUSE | 24.296 | 284 | 168 | 9 | 50 | 324 | 62 | 307 | 5.51e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080360 | A0A396H607 | 95.399 | 326 | 15 | 0 | 1 | 326 | 1 | 326 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0229360 | Msa1080360 | 0.807857 | 4.117655e-50 | -8.615850e-47 |
| Msa0389510 | Msa1080360 | 0.804890 | 1.738422e-49 | -8.615850e-47 |
| Msa1080360 | Msa1125870 | 0.950545 | 1.320254e-108 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080360 | MtrunA17_Chr7g0266671 | 95.399 | 326 | 15 | 0 | 1 | 326 | 1 | 326 | 0.0 | 617 |
| Msa1080360 | MtrunA17_Chr5g0396251 | 35.764 | 288 | 161 | 8 | 44 | 323 | 107 | 378 | 2.75e-51 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080360 | AT3G52570.1 | 58.410 | 327 | 129 | 3 | 5 | 325 | 7 | 332 | 9.94e-123 | 356 |
| Msa1080360 | AT4G10030.1 | 37.209 | 301 | 162 | 10 | 34 | 326 | 97 | 378 | 3.72e-55 | 184 |
Find 101 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCGAAAGATTTGGCGAATT+TGG | 0.132425 | 7_2:-79798751 | Msa1080360:CDS |
| TACTATTTATATAAATTTAT+TGG | 0.170965 | 7_2:-79795177 | Msa1080360:three_prime_UTR |
| CGTGATCACCAACTTTCTTT+AGG | 0.267112 | 7_2:+79795766 | None:intergenic |
| TCTTGGCCTGAAGTTGTTAT+TGG | 0.294151 | 7_2:-79798711 | Msa1080360:CDS |
| GGTTAATACGGCGAAAGATT+TGG | 0.298952 | 7_2:-79798760 | Msa1080360:CDS |
| AGTTGTAGGAATGGTGATTA+TGG | 0.319309 | 7_2:-79798648 | Msa1080360:CDS |
| TTCTTCCAAATGCCGGTCAT+TGG | 0.320481 | 7_2:-79795366 | Msa1080360:CDS |
| TAAATTGATTATAACTGTTT+TGG | 0.330792 | 7_2:+79795151 | None:intergenic |
| ACTTGATCCGCCTCATGATT+TGG | 0.332755 | 7_2:-79798781 | Msa1080360:CDS |
| TTCAGTTTGCTCATAGTTGT+AGG | 0.335712 | 7_2:-79798662 | Msa1080360:CDS |
| AAAATCCTATTGGAATCTAT+TGG | 0.362283 | 7_2:-79795527 | Msa1080360:CDS |
| AGGAGATGTTCAATTCTTAC+TGG | 0.363284 | 7_2:-79795713 | Msa1080360:intron |
| ATGACAAATATGAATATTCC+TGG | 0.365801 | 7_2:+79795059 | None:intergenic |
| TGAAGAACAGCTTTGGGTAT+TGG | 0.372889 | 7_2:-79796570 | Msa1080360:intron |
| TTTCCAATGGTCACTTCTCC+CGG | 0.373866 | 7_2:+79796539 | None:intergenic |
| GTGGAAGTGTAAGGTTTATC+TGG | 0.385086 | 7_2:+79799041 | None:intergenic |
| AATAAATTTATATAAATAGT+AGG | 0.390740 | 7_2:+79795179 | None:intergenic |
| TTCTGCTCAGTGGCCTAAAC+AGG | 0.392108 | 7_2:-79798622 | Msa1080360:intron |
| GCCTCATGATTTGGTTAATA+CGG | 0.400813 | 7_2:-79798772 | Msa1080360:CDS |
| GTTCTCCAATAGATTCCAAT+AGG | 0.401373 | 7_2:+79795522 | None:intergenic |
| GAATGTCCAATAACAACTTC+AGG | 0.402152 | 7_2:+79798705 | None:intergenic |
| GTGGCTCTTGGGTCATCTGA+TGG | 0.406051 | 7_2:-79795832 | Msa1080360:CDS |
| TATTTATTCAATTATGAGGT+GGG | 0.407657 | 7_2:+79795083 | None:intergenic |
| TTGGGTCATCTGATGGGACT+TGG | 0.414061 | 7_2:-79795825 | Msa1080360:CDS |
| TTCTGTGTTCTTCCAAATGC+CGG | 0.414549 | 7_2:-79795373 | Msa1080360:CDS |
| TGAACCCAATGACCGGCATT+TGG | 0.420410 | 7_2:+79795361 | None:intergenic |
| AACACAAGAACTTTCAATGA+TGG | 0.432897 | 7_2:+79795251 | None:intergenic |
| ACAATCTCAAGAAGTCCCTT+TGG | 0.439903 | 7_2:+79795328 | None:intergenic |
| ACTCTAAGACATTGGCAGAT+TGG | 0.441228 | 7_2:-79795800 | Msa1080360:CDS |
| TCTTCCAAATGCCGGTCATT+GGG | 0.443078 | 7_2:-79795365 | Msa1080360:CDS |
| ATTACGGCGGTGGAAGTGTA+AGG | 0.451965 | 7_2:+79799032 | None:intergenic |
| ACGTGATTCTTCGTAGGCTA+TGG | 0.452817 | 7_2:+79799070 | None:intergenic |
| TGGGTATTGGATTCTGTCCC+GGG | 0.454373 | 7_2:-79796557 | Msa1080360:CDS |
| TGAAAGCTGAAGGTTGGTCT+TGG | 0.455344 | 7_2:-79798728 | Msa1080360:CDS |
| TTGGGTATTGGATTCTGTCC+CGG | 0.455850 | 7_2:-79796558 | Msa1080360:CDS |
| TGGGTATTTATTCAATTATG+AGG | 0.462919 | 7_2:+79795079 | None:intergenic |
| GGATCCTCTCAATAGCCTCC+TGG | 0.465957 | 7_2:+79795443 | None:intergenic |
| ATCACCAACTTTCTTTAGGT+TGG | 0.465985 | 7_2:+79795770 | None:intergenic |
| GGAGAACCCTCCACAGGGTA+TGG | 0.466329 | 7_2:-79795506 | Msa1080360:CDS |
| CATCTTGAACGAAGGCGAAT+CGG | 0.466642 | 7_2:+79799101 | None:intergenic |
| TGGCTCTTGGGTCATCTGAT+GGG | 0.466721 | 7_2:-79795831 | Msa1080360:CDS |
| GAAAGATCTCCAGTTTCTGC+TGG | 0.471414 | 7_2:+79798989 | None:intergenic |
| GAGGTGGGGTATGATAAATT+AGG | 0.479149 | 7_2:+79795098 | None:intergenic |
| GAATTAAAGAGATGCCATCT+TGG | 0.486770 | 7_2:+79795300 | None:intergenic |
| TAGAGTCTCACTTTCGAGAT+GGG | 0.490614 | 7_2:+79796459 | None:intergenic |
| AGTTGTTATTGGACATTCCA+TGG | 0.498142 | 7_2:-79798700 | Msa1080360:CDS |
| GGAAACCTTTCCGACAGAAT+CGG | 0.500457 | 7_2:+79795396 | None:intergenic |
| GAGAATTCGTAACTGGAAGA+TGG | 0.512996 | 7_2:+79798930 | None:intergenic |
| GTCCACATGAACCCAATGAC+CGG | 0.514151 | 7_2:+79795354 | None:intergenic |
| CGATTCGCCTTCGTTCAAGA+TGG | 0.517918 | 7_2:-79799100 | Msa1080360:CDS |
| ACTGGAAGATGGAGAGCGAT+TGG | 0.520320 | 7_2:+79798941 | None:intergenic |
| TGGACATTCCATGGGTGGAA+AGG | 0.521856 | 7_2:-79798691 | Msa1080360:CDS |
| TTTCGAGATGGGATTTGTGA+TGG | 0.524571 | 7_2:+79796470 | None:intergenic |
| GGACGCTGTGTGTGGATATG+AGG | 0.532087 | 7_2:-79798830 | Msa1080360:CDS |
| TGTGTGGATATGAGGAATCA+TGG | 0.535687 | 7_2:-79798822 | Msa1080360:CDS |
| ATTTATTCAATTATGAGGTG+GGG | 0.536314 | 7_2:+79795084 | None:intergenic |
| TGAGATTGTAGCTTCCAAGA+TGG | 0.538105 | 7_2:-79795314 | Msa1080360:CDS |
| GTCCCGGGAGAAGTGACCAT+TGG | 0.542662 | 7_2:-79796542 | Msa1080360:CDS |
| TTTGCTCATAGTTGTAGGAA+TGG | 0.546407 | 7_2:-79798657 | Msa1080360:CDS |
| ACTTGGTTACTCTAAGACAT+TGG | 0.549629 | 7_2:-79795808 | Msa1080360:CDS |
| GCCATGGATGATTACGGCGG+TGG | 0.550052 | 7_2:+79799022 | None:intergenic |
| GTGCTGAAAAGAGTGATAGA+TGG | 0.552429 | 7_2:-79795468 | Msa1080360:CDS |
| TTCTGAACATTGAGCAGATG+AGG | 0.553710 | 7_2:-79795216 | Msa1080360:three_prime_UTR |
| ATTTGGTGAAAGCTGAAGGT+TGG | 0.556142 | 7_2:-79798734 | Msa1080360:CDS |
| GGCACCAACCTAAAGAAAGT+TGG | 0.557272 | 7_2:-79795774 | Msa1080360:CDS |
| CTATTTCCATACCCTGTGGA+GGG | 0.557659 | 7_2:+79795500 | None:intergenic |
| ATAGAGTCTCACTTTCGAGA+TGG | 0.560037 | 7_2:+79796458 | None:intergenic |
| GCCGAATAAAACAGAAAGAG+TGG | 0.560720 | 7_2:-79799202 | Msa1080360:five_prime_UTR |
| AAGACATTGGCAGATTGGAT+AGG | 0.563902 | 7_2:-79795795 | Msa1080360:CDS |
| ATTTGATCTTCAAAGTGCTA+AGG | 0.566081 | 7_2:-79795733 | Msa1080360:CDS |
| AAGAGCAACCTTTCCACCCA+TGG | 0.567060 | 7_2:+79798683 | None:intergenic |
| TCTATTGGAGAACCCTCCAC+AGG | 0.567386 | 7_2:-79795512 | Msa1080360:CDS |
| GAACATTGAGCAGATGAGGT+TGG | 0.568806 | 7_2:-79795212 | Msa1080360:three_prime_UTR |
| GTATTTATTCAATTATGAGG+TGG | 0.575886 | 7_2:+79795082 | None:intergenic |
| TTCCAATGGTCACTTCTCCC+GGG | 0.576498 | 7_2:+79796540 | None:intergenic |
| TGCCGGTCATTGGGTTCATG+TGG | 0.578598 | 7_2:-79795356 | Msa1080360:CDS |
| TTGAGCACGTGATTCTTCGT+AGG | 0.580697 | 7_2:+79799064 | None:intergenic |
| TGCTGAAAAGAGTGATAGAT+GGG | 0.581828 | 7_2:-79795467 | Msa1080360:CDS |
| GCGAATTTGGTGAAAGCTGA+AGG | 0.582384 | 7_2:-79798738 | Msa1080360:CDS |
| ACTATTTCCATACCCTGTGG+AGG | 0.584880 | 7_2:+79795499 | None:intergenic |
| GTTGTTATTGGACATTCCAT+GGG | 0.586261 | 7_2:-79798699 | Msa1080360:CDS |
| TGACAAATATGAATATTCCT+GGG | 0.587562 | 7_2:+79795060 | None:intergenic |
| GTTATTGGACATTCCATGGG+TGG | 0.598670 | 7_2:-79798696 | Msa1080360:CDS |
| GGTTCATGTGGACAATCCAA+AGG | 0.603499 | 7_2:-79795344 | Msa1080360:CDS |
| TTTCGATCCATCTTGAACGA+AGG | 0.604973 | 7_2:+79799093 | None:intergenic |
| GTTCATGTGGACAATCCAAA+GGG | 0.605431 | 7_2:-79795343 | Msa1080360:CDS |
| AGGAACCGATTCTGTCGGAA+AGG | 0.606920 | 7_2:-79795401 | Msa1080360:CDS |
| AAAGAGTGATAGATGGGACC+AGG | 0.610094 | 7_2:-79795461 | Msa1080360:CDS |
| GAGGAATCATGGAAAATCAA+CGG | 0.611873 | 7_2:-79798811 | Msa1080360:CDS |
| TCCACCGCCGTAATCATCCA+TGG | 0.623414 | 7_2:-79799023 | Msa1080360:CDS |
| GGCATTTGGAAGAACACAGA+AGG | 0.626381 | 7_2:+79795375 | None:intergenic |
| GCCGTATTAACCAAATCATG+AGG | 0.644237 | 7_2:+79798771 | None:intergenic |
| TCATAATTGAATAAATACCC+AGG | 0.647327 | 7_2:-79795077 | Msa1080360:three_prime_UTR |
| ATTATGGAGATTCTGCTCAG+TGG | 0.651854 | 7_2:-79798632 | Msa1080360:CDS |
| CTATTGGAGAACCCTCCACA+GGG | 0.666022 | 7_2:-79795511 | Msa1080360:CDS |
| GGGACCAGGAGGCTATTGAG+AGG | 0.666431 | 7_2:-79795447 | Msa1080360:CDS |
| ATTACTATTTCCATACCCTG+TGG | 0.679313 | 7_2:+79795496 | None:intergenic |
| GAGTGATAGATGGGACCAGG+AGG | 0.682813 | 7_2:-79795458 | Msa1080360:CDS |
| AGATTGGAGGACGCTGTGTG+TGG | 0.700391 | 7_2:-79798838 | Msa1080360:CDS |
| GTATTAACCAAATCATGAGG+CGG | 0.708208 | 7_2:+79798774 | None:intergenic |
| AAAGCCATGGATGATTACGG+CGG | 0.754027 | 7_2:+79799019 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTATTTTGTTTTAGTTT+TGG | - | chr7_2:79795389-79795408 | Msa1080360:CDS | 15.0% |
| !! | CTTATATTGAAGAAATTATT+TGG | - | chr7_2:79795979-79795998 | Msa1080360:intron | 15.0% |
| !!! | AAATTTTTAGGAGAAAAAAT+GGG | - | chr7_2:79796823-79796842 | Msa1080360:intron | 15.0% |
| !! | TCATATTATTAAAAGATGTT+TGG | - | chr7_2:79797002-79797021 | Msa1080360:intron | 15.0% |
| !!! | GATTTTTTTATTTGGTTTTT+GGG | + | chr7_2:79797218-79797237 | None:intergenic | 15.0% |
| !!! | TGATTTTTTTATTTGGTTTT+TGG | + | chr7_2:79797219-79797238 | None:intergenic | 15.0% |
| !!! | TGTAGATTTTAATTTATTAG+AGG | - | chr7_2:79797401-79797420 | Msa1080360:intron | 15.0% |
| !!! | GTAAATAATTTGTATATTGA+TGG | - | chr7_2:79797960-79797979 | Msa1080360:intron | 15.0% |
| !!! | TAAATTGATTATAACTGTTT+TGG | + | chr7_2:79799107-79799126 | None:intergenic | 15.0% |
| !! | ATATATTAGAAATTACAGAG+AGG | - | chr7_2:79795833-79795852 | Msa1080360:CDS | 20.0% |
| !! | AATAAGCTGAAAATAACATA+TGG | - | chr7_2:79795868-79795887 | Msa1080360:intron | 20.0% |
| !!! | AAGTTTTGATTAATTAACCA+GGG | + | chr7_2:79795962-79795981 | None:intergenic | 20.0% |
| !!! | TAAGTTTTGATTAATTAACC+AGG | + | chr7_2:79795963-79795982 | None:intergenic | 20.0% |
| !! | TAGAGATAATAAAAGAAGAA+AGG | + | chr7_2:79796267-79796286 | None:intergenic | 20.0% |
| !!! | GAAATTTTTAGGAGAAAAAA+TGG | - | chr7_2:79796822-79796841 | Msa1080360:intron | 20.0% |
| !!! | CATGTTAATTTTGCTATTTT+TGG | + | chr7_2:79797164-79797183 | None:intergenic | 20.0% |
| !! | AAATAGCAAAATTAACATGA+AGG | - | chr7_2:79797165-79797184 | Msa1080360:intron | 20.0% |
| !! | TAAATCGCAATTCATAAATT+GGG | + | chr7_2:79797268-79797287 | None:intergenic | 20.0% |
| !! | TTAAATCGCAATTCATAAAT+TGG | + | chr7_2:79797269-79797288 | None:intergenic | 20.0% |
| !! | AAAGCATATATGTTTCTTAA+AGG | + | chr7_2:79797312-79797331 | None:intergenic | 20.0% |
| !!! | ATTTAAAGCGTTTTTAGTAT+AGG | - | chr7_2:79797534-79797553 | Msa1080360:intron | 20.0% |
| !! | GTTACAATTAAATAATGAAC+TGG | + | chr7_2:79797646-79797665 | None:intergenic | 20.0% |
| !! | TTAAAAGTTATGAACAAAAG+AGG | + | chr7_2:79797994-79798013 | None:intergenic | 20.0% |
| !!! | TTGTTTTATTTGAACTATTG+CGG | - | chr7_2:79798978-79798997 | Msa1080360:CDS | 20.0% |
| !! | TATTTATTCAATTATGAGGT+GGG | + | chr7_2:79799175-79799194 | None:intergenic | 20.0% |
| ! | GAGCAGAGAAAAAAAAAAAA+TGG | - | chr7_2:79795075-79795094 | Msa1080360:three_prime_UTR | 25.0% |
| ! | CAGAGAAAAAAAAAAAATGG+CGG | - | chr7_2:79795078-79795097 | Msa1080360:three_prime_UTR | 25.0% |
| ! | AAGTATTATTACAACGATGA+AGG | + | chr7_2:79796062-79796081 | None:intergenic | 25.0% |
| ! | AGAAGAAAGGACTAATATTA+AGG | + | chr7_2:79796254-79796273 | None:intergenic | 25.0% |
| ! | TCATAACATCATGAGTTATT+AGG | - | chr7_2:79796428-79796447 | Msa1080360:intron | 25.0% |
| ! | CATAACATCATGAGTTATTA+GGG | - | chr7_2:79796429-79796448 | Msa1080360:intron | 25.0% |
| !! | GGTTATGAAAATTCAGTTTT+TGG | + | chr7_2:79796553-79796572 | None:intergenic | 25.0% |
| !! | TTGTTGCTATAGTTTGTAAT+AGG | + | chr7_2:79796904-79796923 | None:intergenic | 25.0% |
| !!! | CTGTATTTTTGAACTGATTT+GGG | + | chr7_2:79797064-79797083 | None:intergenic | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | + | chr7_2:79797441-79797460 | None:intergenic | 25.0% |
| ! | ACATGGAAGATAATAGTTTA+CGG | + | chr7_2:79797823-79797842 | None:intergenic | 25.0% |
| ! | TAGCTTCATAAAAACACAAA+AGG | + | chr7_2:79798063-79798082 | None:intergenic | 25.0% |
| ! | AAAAGAAAATGGAGAAACTA+AGG | + | chr7_2:79798214-79798233 | None:intergenic | 25.0% |
| ! | TTTAGATATTAGACGACAAT+TGG | + | chr7_2:79798250-79798269 | None:intergenic | 25.0% |
| ! | TAACACTGTTCAATTACAAT+TGG | + | chr7_2:79798324-79798343 | None:intergenic | 25.0% |
| ! | AAAATCCTATTGGAATCTAT+TGG | - | chr7_2:79798728-79798747 | Msa1080360:CDS | 25.0% |
| ! | ATTTATTCAATTATGAGGTG+GGG | + | chr7_2:79799174-79799193 | None:intergenic | 25.0% |
| ! | GTATTTATTCAATTATGAGG+TGG | + | chr7_2:79799176-79799195 | None:intergenic | 25.0% |
| ! | TGGGTATTTATTCAATTATG+AGG | + | chr7_2:79799179-79799198 | None:intergenic | 25.0% |
| ! | TCATAATTGAATAAATACCC+AGG | - | chr7_2:79799178-79799197 | Msa1080360:exon | 25.0% |
| ! | TGACAAATATGAATATTCCT+GGG | + | chr7_2:79799198-79799217 | None:intergenic | 25.0% |
| ! | ATGACAAATATGAATATTCC+TGG | + | chr7_2:79799199-79799218 | None:intergenic | 25.0% |
| !! | TCCACTCTTTCTGTTTTATT+CGG | + | chr7_2:79795057-79795076 | None:intergenic | 30.0% |
| TAAAAGAGAGAATTCGTAAC+TGG | + | chr7_2:79795335-79795354 | None:intergenic | 30.0% | |
| TTCAGAAGAAAAACCTGTTT+AGG | + | chr7_2:79795649-79795668 | None:intergenic | 30.0% | |
| ATTATTTGGCAATGAACAAG+TGG | - | chr7_2:79795993-79796012 | Msa1080360:intron | 30.0% | |
| ATTGTTGTGAATATAGCAGT+AGG | - | chr7_2:79796028-79796047 | Msa1080360:intron | 30.0% | |
| ! | TCTTTCGTTTATCTCTGAAA+AGG | + | chr7_2:79796196-79796215 | None:intergenic | 30.0% |
| CTACTAAAATCTTGTGAGTA+AGG | - | chr7_2:79796523-79796542 | Msa1080360:CDS | 30.0% | |
| AAATGTAGTGAACAAAGTAG+TGG | - | chr7_2:79796677-79796696 | Msa1080360:intron | 30.0% | |
| AATGTAGTGAACAAAGTAGT+GGG | - | chr7_2:79796678-79796697 | Msa1080360:intron | 30.0% | |
| GTTTAGAAAGTTAGTGTCTT+TGG | - | chr7_2:79796790-79796809 | Msa1080360:intron | 30.0% | |
| ! | GGTGAGAATGAGAAATTTTT+AGG | - | chr7_2:79796811-79796830 | Msa1080360:intron | 30.0% |
| !! | GCTGTATTTTTGAACTGATT+TGG | + | chr7_2:79797065-79797084 | None:intergenic | 30.0% |
| ATGCTGCCTTAGAAAAAATT+GGG | + | chr7_2:79797107-79797126 | None:intergenic | 30.0% | |
| !!! | CTGGGTCTGATTTTTTTATT+TGG | + | chr7_2:79797226-79797245 | None:intergenic | 30.0% |
| TTTATTAGAGGTCAATGAGT+TGG | - | chr7_2:79797413-79797432 | Msa1080360:intron | 30.0% | |
| ! | TGGTTTTTGATAGAACACTA+TGG | - | chr7_2:79797445-79797464 | Msa1080360:intron | 30.0% |
| !! | TTCATCACTTTTGTTTCCAA+TGG | + | chr7_2:79797732-79797751 | None:intergenic | 30.0% |
| !!! | ACGTGATGTTTTAATGACTT+TGG | - | chr7_2:79797754-79797773 | Msa1080360:intron | 30.0% |
| CTTCATAAAAACACAAAAGG+TGG | + | chr7_2:79798060-79798079 | None:intergenic | 30.0% | |
| TTTGTACCTTACCATAATCT+CGG | + | chr7_2:79798086-79798105 | None:intergenic | 30.0% | |
| ! | TTTCTCCATTTTCTTTTGTG+AGG | - | chr7_2:79798217-79798236 | Msa1080360:intron | 30.0% |
| ! | ATTTGATCTTCAAAGTGCTA+AGG | - | chr7_2:79798522-79798541 | Msa1080360:intron | 30.0% |
| !! | CCTACAGAATTTTAACATTC+GGG | + | chr7_2:79798706-79798725 | None:intergenic | 30.0% |
| !! | CCCTACAGAATTTTAACATT+CGG | + | chr7_2:79798707-79798726 | None:intergenic | 30.0% |
| CCGAATGTTAAAATTCTGTA+GGG | - | chr7_2:79798704-79798723 | Msa1080360:CDS | 30.0% | |
| !!! | CTTTTTGACTAGCTAGTTTT+TGG | + | chr7_2:79798836-79798855 | None:intergenic | 30.0% |
| CAAAAACTAGCTAGTCAAAA+AGG | - | chr7_2:79798834-79798853 | Msa1080360:CDS | 30.0% | |
| AACACAAGAACTTTCAATGA+TGG | + | chr7_2:79799007-79799026 | None:intergenic | 30.0% | |
| CAAAAAGCCATGGATGATTA+CGG | + | chr7_2:79795242-79795261 | None:intergenic | 35.0% | |
| ! | GTAATCATCCATGGCTTTTT+GGG | - | chr7_2:79795241-79795260 | Msa1080360:three_prime_UTR | 35.0% |
| !!! | TTTAGTTTTGGTGTGCAGAT+TGG | - | chr7_2:79795401-79795420 | Msa1080360:CDS | 35.0% |
| GAGGAATCATGGAAAATCAA+CGG | - | chr7_2:79795444-79795463 | Msa1080360:CDS | 35.0% | |
| GTATTAACCAAATCATGAGG+CGG | + | chr7_2:79795484-79795503 | None:intergenic | 35.0% | |
| !! | GCCTCATGATTTGGTTAATA+CGG | - | chr7_2:79795483-79795502 | Msa1080360:CDS | 35.0% |
| GAATGTCCAATAACAACTTC+AGG | + | chr7_2:79795553-79795572 | None:intergenic | 35.0% | |
| ! | AGTTGTTATTGGACATTCCA+TGG | - | chr7_2:79795555-79795574 | Msa1080360:intron | 35.0% |
| ! | GTTGTTATTGGACATTCCAT+GGG | - | chr7_2:79795556-79795575 | Msa1080360:intron | 35.0% |
| ! | TTCAGTTTGCTCATAGTTGT+AGG | - | chr7_2:79795593-79795612 | Msa1080360:intron | 35.0% |
| TTTGCTCATAGTTGTAGGAA+TGG | - | chr7_2:79795598-79795617 | Msa1080360:intron | 35.0% | |
| AGTTGTAGGAATGGTGATTA+TGG | - | chr7_2:79795607-79795626 | Msa1080360:intron | 35.0% | |
| TTAGAAATTACAGAGAGGAG+AGG | - | chr7_2:79795838-79795857 | Msa1080360:intron | 35.0% | |
| ATCTACTGACATAACCCATT+GGG | + | chr7_2:79795935-79795954 | None:intergenic | 35.0% | |
| TATCTACTGACATAACCCAT+TGG | + | chr7_2:79795936-79795955 | None:intergenic | 35.0% | |
| TATGTCAGTAGATAAAACCC+TGG | - | chr7_2:79795942-79795961 | Msa1080360:intron | 35.0% | |
| ! | ATTGAGACTTGTGCTCTTTT+CGG | - | chr7_2:79796102-79796121 | Msa1080360:intron | 35.0% |
| !! | TAGTTTCTCCCTCTAAAATC+TGG | - | chr7_2:79796285-79796304 | Msa1080360:intron | 35.0% |
| ! | GATAACACCCAATTTGAGTT+GGG | + | chr7_2:79796318-79796337 | None:intergenic | 35.0% |
| TGATAACACCCAATTTGAGT+TGG | + | chr7_2:79796319-79796338 | None:intergenic | 35.0% | |
| ACTCTGATGATCAAGTTAGT+AGG | - | chr7_2:79796338-79796357 | Msa1080360:intron | 35.0% | |
| ACCTGACTAATATAGCCATT+TGG | - | chr7_2:79796405-79796424 | Msa1080360:intron | 35.0% | |
| ACCAAATGGCTATATTAGTC+AGG | + | chr7_2:79796409-79796428 | None:intergenic | 35.0% | |
| CTCATGATGTTATGACCAAA+TGG | + | chr7_2:79796423-79796442 | None:intergenic | 35.0% | |
| TAAAATCTTGTGAGTAAGGC+TGG | - | chr7_2:79796527-79796546 | Msa1080360:CDS | 35.0% | |
| ACTTTCTAAACCTCAGTAGA+TGG | + | chr7_2:79796781-79796800 | None:intergenic | 35.0% | |
| TGCTGCCTTAGAAAAAATTG+GGG | + | chr7_2:79797106-79797125 | None:intergenic | 35.0% | |
| CATGCTGCCTTAGAAAAAAT+TGG | + | chr7_2:79797108-79797127 | None:intergenic | 35.0% | |
| TCGCAATTCATAAATTGGGT+TGG | + | chr7_2:79797264-79797283 | None:intergenic | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr7_2:79797425-79797444 | Msa1080360:intron | 35.0% |
| TATCTTCCATGTTTGTGCTA+AGG | - | chr7_2:79797831-79797850 | Msa1080360:intron | 35.0% | |
| AGTACATACTCGGAAACATT+TGG | + | chr7_2:79798032-79798051 | None:intergenic | 35.0% | |
| TTATGAAGCTACCGAGATTA+TGG | - | chr7_2:79798072-79798091 | Msa1080360:intron | 35.0% | |
| CAATTACAATTGGACACAGT+AGG | + | chr7_2:79798314-79798333 | None:intergenic | 35.0% | |
| AAGCCAACAGGAAAATAGAA+CGG | + | chr7_2:79798377-79798396 | None:intergenic | 35.0% | |
| AAAGTACATTTCAAGCCAAC+AGG | + | chr7_2:79798389-79798408 | None:intergenic | 35.0% | |
| !! | ACTTGGTTACTCTAAGACAT+TGG | - | chr7_2:79798447-79798466 | Msa1080360:intron | 35.0% |
| ATCACCAACTTTCTTTAGGT+TGG | + | chr7_2:79798488-79798507 | None:intergenic | 35.0% | |
| AGGAGATGTTCAATTCTTAC+TGG | - | chr7_2:79798542-79798561 | Msa1080360:intron | 35.0% | |
| !! | ATGTTACTTTCATGCTGTCA+CGG | + | chr7_2:79798682-79798701 | None:intergenic | 35.0% |
| CCCGAATGTTAAAATTCTGT+AGG | - | chr7_2:79798703-79798722 | Msa1080360:CDS | 35.0% | |
| TCTGTAGGGAAAAATCCTAT+TGG | - | chr7_2:79798718-79798737 | Msa1080360:CDS | 35.0% | |
| GTTCTCCAATAGATTCCAAT+AGG | + | chr7_2:79798736-79798755 | None:intergenic | 35.0% | |
| ATTACTATTTCCATACCCTG+TGG | + | chr7_2:79798762-79798781 | None:intergenic | 35.0% | |
| TGCTGAAAAGAGTGATAGAT+GGG | - | chr7_2:79798788-79798807 | Msa1080360:CDS | 35.0% | |
| GAATTAAAGAGATGCCATCT+TGG | + | chr7_2:79798958-79798977 | None:intergenic | 35.0% | |
| GCCGAATAAAACAGAAAGAG+TGG | - | chr7_2:79795053-79795072 | Msa1080360:three_prime_UTR | 40.0% | |
| TTTCGATCCATCTTGAACGA+AGG | + | chr7_2:79795165-79795184 | None:intergenic | 40.0% | |
| ! | GTGGAAGTGTAAGGTTTATC+TGG | + | chr7_2:79795217-79795236 | None:intergenic | 40.0% |
| ! | CGTAATCATCCATGGCTTTT+TGG | - | chr7_2:79795240-79795259 | Msa1080360:three_prime_UTR | 40.0% |
| GAGAATTCGTAACTGGAAGA+TGG | + | chr7_2:79795328-79795347 | None:intergenic | 40.0% | |
| TGTGTGGATATGAGGAATCA+TGG | - | chr7_2:79795433-79795452 | Msa1080360:CDS | 40.0% | |
| GCCGTATTAACCAAATCATG+AGG | + | chr7_2:79795487-79795506 | None:intergenic | 40.0% | |
| GGTTAATACGGCGAAAGATT+TGG | - | chr7_2:79795495-79795514 | Msa1080360:CDS | 40.0% | |
| ! | ATTTGGTGAAAGCTGAAGGT+TGG | - | chr7_2:79795521-79795540 | Msa1080360:CDS | 40.0% |
| TCTTGGCCTGAAGTTGTTAT+TGG | - | chr7_2:79795544-79795563 | Msa1080360:intron | 40.0% | |
| ATTATGGAGATTCTGCTCAG+TGG | - | chr7_2:79795623-79795642 | Msa1080360:intron | 40.0% | |
| ! | TTGAGACTTGTGCTCTTTTC+GGG | - | chr7_2:79796103-79796122 | Msa1080360:intron | 40.0% |
| !! | TCTTTTCGGGGTGAATTTGA+AGG | - | chr7_2:79796116-79796135 | Msa1080360:intron | 40.0% |
| TAAGGATAACTCTCAGCTCA+TGG | - | chr7_2:79796378-79796397 | Msa1080360:intron | 40.0% | |
| CGGACAACTGAATAACTATC+TGG | + | chr7_2:79796460-79796479 | None:intergenic | 40.0% | |
| TTAATATAGCCTAGCACGTG+TGG | + | chr7_2:79796499-79796518 | None:intergenic | 40.0% | |
| CCAGTGCTAATTGTGATTCA+TGG | + | chr7_2:79796574-79796593 | None:intergenic | 40.0% | |
| CCATGAATCACAATTAGCAC+TGG | - | chr7_2:79796571-79796590 | Msa1080360:intron | 40.0% | |
| TCCTTACTTGTGCATTCTCA+TGG | + | chr7_2:79796627-79796646 | None:intergenic | 40.0% | |
| ATGAGAATGCACAAGTAAGG+AGG | - | chr7_2:79796626-79796645 | Msa1080360:intron | 40.0% | |
| AAGTAAGGAGGAAGGAACTA+GGG | - | chr7_2:79796638-79796657 | Msa1080360:intron | 40.0% | |
| AGGAGAAAAAATGGGTCAGA+AGG | - | chr7_2:79796831-79796850 | Msa1080360:intron | 40.0% | |
| AATAGGCTGCTGCATATTCT+TGG | + | chr7_2:79796887-79796906 | None:intergenic | 40.0% | |
| TAGCAACAAGTTGTCTTTGC+AGG | - | chr7_2:79796915-79796934 | Msa1080360:intron | 40.0% | |
| !!! | TGCAGCCCCAATTTTTTCTA+AGG | - | chr7_2:79797098-79797117 | Msa1080360:intron | 40.0% |
| AAATCAGACCCAGATAGAAC+TGG | - | chr7_2:79797233-79797252 | Msa1080360:intron | 40.0% | |
| TGGTTGTACCAGTTCTATCT+GGG | + | chr7_2:79797244-79797263 | None:intergenic | 40.0% | |
| TTGGTTGTACCAGTTCTATC+TGG | + | chr7_2:79797245-79797264 | None:intergenic | 40.0% | |
| CCTGAGAAGAGGATAGAAAA+TGG | + | chr7_2:79797335-79797354 | None:intergenic | 40.0% | |
| ! | CCATTTTCTATCCTCTTCTC+AGG | - | chr7_2:79797332-79797351 | Msa1080360:intron | 40.0% |
| GACATAGAAAACCTGAGAAG+AGG | + | chr7_2:79797346-79797365 | None:intergenic | 40.0% | |
| GACTAACACTCTCTGTATGT+TGG | - | chr7_2:79797556-79797575 | Msa1080360:intron | 40.0% | |
| GGCTTACTACAACTATCTAG+TGG | - | chr7_2:79797577-79797596 | Msa1080360:intron | 40.0% | |
| ! | GCGCTTATATTTTTCACTGC+TGG | - | chr7_2:79797616-79797635 | Msa1080360:intron | 40.0% |
| !! | TGAAGAACAGCTTTGGGTAT+TGG | - | chr7_2:79797685-79797704 | Msa1080360:intron | 40.0% |
| TTTCGAGATGGGATTTGTGA+TGG | + | chr7_2:79797788-79797807 | None:intergenic | 40.0% | |
| TAGAGTCTCACTTTCGAGAT+GGG | + | chr7_2:79797799-79797818 | None:intergenic | 40.0% | |
| ATAGAGTCTCACTTTCGAGA+TGG | + | chr7_2:79797800-79797819 | None:intergenic | 40.0% | |
| TGACAACCTTAGCACAAACA+TGG | + | chr7_2:79797840-79797859 | None:intergenic | 40.0% | |
| TTTGTGCTAAGGTTGTCAAG+AGG | - | chr7_2:79797842-79797861 | Msa1080360:intron | 40.0% | |
| GGTGGCATTTAGTACATACT+CGG | + | chr7_2:79798042-79798061 | None:intergenic | 40.0% | |
| AAGCTACCGAGATTATGGTA+AGG | - | chr7_2:79798077-79798096 | Msa1080360:intron | 40.0% | |
| CACAGCCTCACAAAAGAAAA+TGG | + | chr7_2:79798225-79798244 | None:intergenic | 40.0% | |
| GAAAATAGAACGGAACATGG+AGG | + | chr7_2:79798367-79798386 | None:intergenic | 40.0% | |
| CAGGAAAATAGAACGGAACA+TGG | + | chr7_2:79798370-79798389 | None:intergenic | 40.0% | |
| ! | GTTCCGTTCTATTTTCCTGT+TGG | - | chr7_2:79798371-79798390 | Msa1080360:intron | 40.0% |
| ! | TGTACTTTGTGCCTCTTTTC+AGG | - | chr7_2:79798401-79798420 | Msa1080360:intron | 40.0% |
| !! | ACTCTAAGACATTGGCAGAT+TGG | - | chr7_2:79798455-79798474 | Msa1080360:intron | 40.0% |
| AAGACATTGGCAGATTGGAT+AGG | - | chr7_2:79798460-79798479 | Msa1080360:intron | 40.0% | |
| CGTGATCACCAACTTTCTTT+AGG | + | chr7_2:79798492-79798511 | None:intergenic | 40.0% | |
| GTGCTGAAAAGAGTGATAGA+TGG | - | chr7_2:79798787-79798806 | Msa1080360:CDS | 40.0% | |
| ! | CAAAAAGGAACCGATTCTGT+CGG | - | chr7_2:79798849-79798868 | Msa1080360:intron | 40.0% |
| TTCTGTGTTCTTCCAAATGC+CGG | - | chr7_2:79798882-79798901 | Msa1080360:intron | 40.0% | |
| GTTCATGTGGACAATCCAAA+GGG | - | chr7_2:79798912-79798931 | Msa1080360:intron | 40.0% | |
| ACAATCTCAAGAAGTCCCTT+TGG | + | chr7_2:79798930-79798949 | None:intergenic | 40.0% | |
| TGAGATTGTAGCTTCCAAGA+TGG | - | chr7_2:79798941-79798960 | Msa1080360:intron | 40.0% | |
| TTCTGAACATTGAGCAGATG+AGG | - | chr7_2:79799039-79799058 | Msa1080360:CDS | 40.0% | |
| GAGGTGGGGTATGATAAATT+AGG | + | chr7_2:79799160-79799179 | None:intergenic | 40.0% | |
| CATCTTGAACGAAGGCGAAT+CGG | + | chr7_2:79795157-79795176 | None:intergenic | 45.0% | |
| ACGTGATTCTTCGTAGGCTA+TGG | + | chr7_2:79795188-79795207 | None:intergenic | 45.0% | |
| TTGAGCACGTGATTCTTCGT+AGG | + | chr7_2:79795194-79795213 | None:intergenic | 45.0% | |
| AAAGCCATGGATGATTACGG+CGG | + | chr7_2:79795239-79795258 | None:intergenic | 45.0% | |
| !!! | TTTTGGGATCCAGCAGAAAC+TGG | - | chr7_2:79795257-79795276 | Msa1080360:three_prime_UTR | 45.0% |
| GAAAGATCTCCAGTTTCTGC+TGG | + | chr7_2:79795269-79795288 | None:intergenic | 45.0% | |
| !! | AGTTTTGGTGTGCAGATTGG+AGG | - | chr7_2:79795404-79795423 | Msa1080360:CDS | 45.0% |
| ACTTGATCCGCCTCATGATT+TGG | - | chr7_2:79795474-79795493 | Msa1080360:CDS | 45.0% | |
| GGCGAAAGATTTGGCGAATT+TGG | - | chr7_2:79795504-79795523 | Msa1080360:CDS | 45.0% | |
| ! | GCGAATTTGGTGAAAGCTGA+AGG | - | chr7_2:79795517-79795536 | Msa1080360:CDS | 45.0% |
| !! | TGAAAGCTGAAGGTTGGTCT+TGG | - | chr7_2:79795527-79795546 | Msa1080360:CDS | 45.0% |
| GTTATTGGACATTCCATGGG+TGG | - | chr7_2:79795559-79795578 | Msa1080360:intron | 45.0% | |
| TCTCCTTAACTGTCTCCCAA+TGG | - | chr7_2:79795917-79795936 | Msa1080360:intron | 45.0% | |
| CTCCTTAACTGTCTCCCAAT+GGG | - | chr7_2:79795918-79795937 | Msa1080360:intron | 45.0% | |
| AACCCATTGGGAGACAGTTA+AGG | + | chr7_2:79795923-79795942 | None:intergenic | 45.0% | |
| ! | TGAGACTTGTGCTCTTTTCG+GGG | - | chr7_2:79796104-79796123 | Msa1080360:intron | 45.0% |
| TTTCGGGGTGAATTTGAAGG+TGG | - | chr7_2:79796119-79796138 | Msa1080360:intron | 45.0% | |
| GGTGAATTTGAAGGTGGTTG+CGG | - | chr7_2:79796125-79796144 | Msa1080360:intron | 45.0% | |
| ! | TTGAAGGTGGTTGCGGATTA+TGG | - | chr7_2:79796132-79796151 | Msa1080360:intron | 45.0% |
| ! | TGAAGGTGGTTGCGGATTAT+GGG | - | chr7_2:79796133-79796152 | Msa1080360:intron | 45.0% |
| TCTAAGCTAGCTAGAGTGAG+GGG | + | chr7_2:79796173-79796192 | None:intergenic | 45.0% | |
| GTCTAAGCTAGCTAGAGTGA+GGG | + | chr7_2:79796174-79796193 | None:intergenic | 45.0% | |
| !! | TCCCTCTAAAATCTGGAGTG+AGG | - | chr7_2:79796292-79796311 | Msa1080360:intron | 45.0% |
| ! | GCCTCACTCCAGATTTTAGA+GGG | + | chr7_2:79796296-79796315 | None:intergenic | 45.0% |
| AGTGAGGCCCAACTCAAATT+GGG | - | chr7_2:79796308-79796327 | Msa1080360:intron | 45.0% | |
| GCGTATATGAGTGAGCGATA+AGG | - | chr7_2:79796360-79796379 | Msa1080360:intron | 45.0% | |
| TAGTAGGTCAAGGGTGGTAA+GGG | + | chr7_2:79796597-79796616 | None:intergenic | 45.0% | |
| ! | TTCTCATGGCTTGTGGTAGT+AGG | + | chr7_2:79796613-79796632 | None:intergenic | 45.0% |
| TTGTGCATTCTCATGGCTTG+TGG | + | chr7_2:79796620-79796639 | None:intergenic | 45.0% | |
| GCCATGAGAATGCACAAGTA+AGG | - | chr7_2:79796623-79796642 | Msa1080360:intron | 45.0% | |
| GAATGCACAAGTAAGGAGGA+AGG | - | chr7_2:79796630-79796649 | Msa1080360:intron | 45.0% | |
| CAAGTAAGGAGGAAGGAACT+AGG | - | chr7_2:79796637-79796656 | Msa1080360:intron | 45.0% | |
| ATGACTACAATGCAGCAGCA+GGG | - | chr7_2:79796708-79796727 | Msa1080360:intron | 45.0% | |
| GAAAAAATGGGTCAGAAGGC+TGG | - | chr7_2:79796835-79796854 | Msa1080360:intron | 45.0% | |
| CTGCATATTCTTGGCAACGT+TGG | + | chr7_2:79796878-79796897 | None:intergenic | 45.0% | |
| GGCTTCTTCAGAACAAAGCA+TGG | - | chr7_2:79797023-79797042 | Msa1080360:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr7_2:79797494-79797513 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr7_2:79797495-79797514 | None:intergenic | 45.0% |
| TCTCTGCTGAAGAACAGCTT+TGG | - | chr7_2:79797678-79797697 | Msa1080360:intron | 45.0% | |
| CTCTGCTGAAGAACAGCTTT+GGG | - | chr7_2:79797679-79797698 | Msa1080360:intron | 45.0% | |
| !! | TTGGGTATTGGATTCTGTCC+CGG | - | chr7_2:79797697-79797716 | Msa1080360:intron | 45.0% |
| TTTCCAATGGTCACTTCTCC+CGG | + | chr7_2:79797719-79797738 | None:intergenic | 45.0% | |
| !! | ACTTTGTGCCTCTTTTCAGG+TGG | - | chr7_2:79798404-79798423 | Msa1080360:intron | 45.0% |
| GGCACCAACCTAAAGAAAGT+TGG | - | chr7_2:79798481-79798500 | Msa1080360:intron | 45.0% | |
| TTACTTTCATGCTGTCACGG+AGG | + | chr7_2:79798679-79798698 | None:intergenic | 45.0% | |
| CTATTTCCATACCCTGTGGA+GGG | + | chr7_2:79798758-79798777 | None:intergenic | 45.0% | |
| ACTATTTCCATACCCTGTGG+AGG | + | chr7_2:79798759-79798778 | None:intergenic | 45.0% | |
| AAAGAGTGATAGATGGGACC+AGG | - | chr7_2:79798794-79798813 | Msa1080360:CDS | 45.0% | |
| GGAAACCTTTCCGACAGAAT+CGG | + | chr7_2:79798862-79798881 | None:intergenic | 45.0% | |
| GGCATTTGGAAGAACACAGA+AGG | + | chr7_2:79798883-79798902 | None:intergenic | 45.0% | |
| TTCTTCCAAATGCCGGTCAT+TGG | - | chr7_2:79798889-79798908 | Msa1080360:intron | 45.0% | |
| TCTTCCAAATGCCGGTCATT+GGG | - | chr7_2:79798890-79798909 | Msa1080360:intron | 45.0% | |
| GGTTCATGTGGACAATCCAA+AGG | - | chr7_2:79798911-79798930 | Msa1080360:intron | 45.0% | |
| GAACATTGAGCAGATGAGGT+TGG | - | chr7_2:79799043-79799062 | Msa1080360:CDS | 45.0% | |
| !! | AATAAATTTATATAAATAGT+AGG | + | chr7_2:79799079-79799098 | None:intergenic | 5.0% |
| !! | TACTATTTATATAAATTTAT+TGG | - | chr7_2:79799078-79799097 | Msa1080360:CDS | 5.0% |
| CGATTCGCCTTCGTTCAAGA+TGG | - | chr7_2:79795155-79795174 | Msa1080360:three_prime_UTR | 50.0% | |
| ! | ATTACGGCGGTGGAAGTGTA+AGG | + | chr7_2:79795226-79795245 | None:intergenic | 50.0% |
| TGCTGGATCCCAAAAAGCCA+TGG | + | chr7_2:79795252-79795271 | None:intergenic | 50.0% | |
| ACTGGAAGATGGAGAGCGAT+TGG | + | chr7_2:79795317-79795336 | None:intergenic | 50.0% | |
| TGGACATTCCATGGGTGGAA+AGG | - | chr7_2:79795564-79795583 | Msa1080360:intron | 50.0% | |
| AAGAGCAACCTTTCCACCCA+TGG | + | chr7_2:79795575-79795594 | None:intergenic | 50.0% | |
| TTCTGCTCAGTGGCCTAAAC+AGG | - | chr7_2:79795633-79795652 | Msa1080360:intron | 50.0% | |
| GGTCTAAGCTAGCTAGAGTG+AGG | + | chr7_2:79796175-79796194 | None:intergenic | 50.0% | |
| ! | GGCCTCACTCCAGATTTTAG+AGG | + | chr7_2:79796297-79796316 | None:intergenic | 50.0% |
| GAGTGAGGCCCAACTCAAAT+TGG | - | chr7_2:79796307-79796326 | Msa1080360:intron | 50.0% | |
| ! | GTGGATTGAGAGAGGCATGA+CGG | + | chr7_2:79796480-79796499 | None:intergenic | 50.0% |
| ! | TAGCACGTGTGGATTGAGAG+AGG | + | chr7_2:79796488-79796507 | None:intergenic | 50.0% |
| TCTCTCAATCCACACGTGCT+AGG | - | chr7_2:79796487-79796506 | Msa1080360:CDS | 50.0% | |
| GTAGTAGGTCAAGGGTGGTA+AGG | + | chr7_2:79796598-79796617 | None:intergenic | 50.0% | |
| TTGTGGTAGTAGGTCAAGGG+TGG | + | chr7_2:79796603-79796622 | None:intergenic | 50.0% | |
| GGCTTGTGGTAGTAGGTCAA+GGG | + | chr7_2:79796606-79796625 | None:intergenic | 50.0% | |
| ! | TGGCTTGTGGTAGTAGGTCA+AGG | + | chr7_2:79796607-79796626 | None:intergenic | 50.0% |
| GATGACTACAATGCAGCAGC+AGG | - | chr7_2:79796707-79796726 | Msa1080360:intron | 50.0% | |
| GAGAGAGAGACCATCTACTG+AGG | - | chr7_2:79796768-79796787 | Msa1080360:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr7_2:79797490-79797509 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr7_2:79797496-79797515 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr7_2:79797493-79797512 | Msa1080360:intron | 50.0% | |
| !! | TGGGTATTGGATTCTGTCCC+GGG | - | chr7_2:79797698-79797717 | Msa1080360:intron | 50.0% |
| TTCCAATGGTCACTTCTCCC+GGG | + | chr7_2:79797718-79797737 | None:intergenic | 50.0% | |
| !! | AACGGAACATGGAGGCATCA+CGG | + | chr7_2:79798359-79798378 | None:intergenic | 50.0% |
| !!! | CCTCTTTTCAGGTGGCTCTT+GGG | - | chr7_2:79798412-79798431 | Msa1080360:intron | 50.0% |
| TGGCTCTTGGGTCATCTGAT+GGG | - | chr7_2:79798424-79798443 | Msa1080360:intron | 50.0% | |
| TTGGGTCATCTGATGGGACT+TGG | - | chr7_2:79798430-79798449 | Msa1080360:intron | 50.0% | |
| TCTATTGGAGAACCCTCCAC+AGG | - | chr7_2:79798743-79798762 | Msa1080360:CDS | 50.0% | |
| CTATTGGAGAACCCTCCACA+GGG | - | chr7_2:79798744-79798763 | Msa1080360:CDS | 50.0% | |
| ! | AGGAACCGATTCTGTCGGAA+AGG | - | chr7_2:79798854-79798873 | Msa1080360:intron | 50.0% |
| TGAACCCAATGACCGGCATT+TGG | + | chr7_2:79798897-79798916 | None:intergenic | 50.0% | |
| GTCCACATGAACCCAATGAC+CGG | + | chr7_2:79798904-79798923 | None:intergenic | 50.0% | |
| TCCACCGCCGTAATCATCCA+TGG | - | chr7_2:79795232-79795251 | Msa1080360:three_prime_UTR | 55.0% | |
| AGATTGGAGGACGCTGTGTG+TGG | - | chr7_2:79795417-79795436 | Msa1080360:CDS | 55.0% | |
| GGACGCTGTGTGTGGATATG+AGG | - | chr7_2:79795425-79795444 | Msa1080360:CDS | 55.0% | |
| ACTACAATGCAGCAGCAGGG+AGG | - | chr7_2:79796711-79796730 | Msa1080360:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr7_2:79797482-79797501 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr7_2:79797481-79797500 | Msa1080360:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr7_2:79797482-79797501 | Msa1080360:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr7_2:79797488-79797507 | Msa1080360:intron | 55.0% | |
| !!! | GCCTCTTTTCAGGTGGCTCT+TGG | - | chr7_2:79798411-79798430 | Msa1080360:intron | 55.0% |
| CCCAAGAGCCACCTGAAAAG+AGG | + | chr7_2:79798415-79798434 | None:intergenic | 55.0% | |
| GTGGCTCTTGGGTCATCTGA+TGG | - | chr7_2:79798423-79798442 | Msa1080360:intron | 55.0% | |
| GAGTGATAGATGGGACCAGG+AGG | - | chr7_2:79798797-79798816 | Msa1080360:CDS | 55.0% | |
| GGATCCTCTCAATAGCCTCC+TGG | + | chr7_2:79798815-79798834 | None:intergenic | 55.0% | |
| TGCCGGTCATTGGGTTCATG+TGG | - | chr7_2:79798899-79798918 | Msa1080360:intron | 55.0% | |
| GCCATGGATGATTACGGCGG+TGG | + | chr7_2:79795236-79795255 | None:intergenic | 60.0% | |
| GTCCCGGGAGAAGTGACCAT+TGG | - | chr7_2:79797713-79797732 | Msa1080360:intron | 60.0% | |
| GGAGAACCCTCCACAGGGTA+TGG | - | chr7_2:79798749-79798768 | Msa1080360:CDS | 60.0% | |
| GGGACCAGGAGGCTATTGAG+AGG | - | chr7_2:79798808-79798827 | Msa1080360:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 79795053 | 79799224 | 79795053 | ID=Msa1080360;Name=Msa1080360 |
| chr7_2 | mRNA | 79795053 | 79799224 | 79795053 | ID=Msa1080360-mRNA-1;Parent=Msa1080360;Name=Msa1080360-mRNA-1;_AED=0.17;_eAED=0.17;_QI=41|1|1|1|1|1|5|250|326 |
| chr7_2 | exon | 79795053 | 79795552 | 79795053 | ID=Msa1080360-mRNA-1:exon:20129;Parent=Msa1080360-mRNA-1 |
| chr7_2 | exon | 79795714 | 79795854 | 79795714 | ID=Msa1080360-mRNA-1:exon:20128;Parent=Msa1080360-mRNA-1 |
| chr7_2 | exon | 79796470 | 79796582 | 79796470 | ID=Msa1080360-mRNA-1:exon:20127;Parent=Msa1080360-mRNA-1 |
| chr7_2 | exon | 79798623 | 79798858 | 79798623 | ID=Msa1080360-mRNA-1:exon:20126;Parent=Msa1080360-mRNA-1 |
| chr7_2 | exon | 79798943 | 79799224 | 79798943 | ID=Msa1080360-mRNA-1:exon:20125;Parent=Msa1080360-mRNA-1 |
| chr7_2 | five_prime_UTR | 79799184 | 79799224 | 79799184 | ID=Msa1080360-mRNA-1:five_prime_utr;Parent=Msa1080360-mRNA-1 |
| chr7_2 | CDS | 79798943 | 79799183 | 79798943 | ID=Msa1080360-mRNA-1:cds;Parent=Msa1080360-mRNA-1 |
| chr7_2 | CDS | 79798623 | 79798858 | 79798623 | ID=Msa1080360-mRNA-1:cds;Parent=Msa1080360-mRNA-1 |
| chr7_2 | CDS | 79796470 | 79796582 | 79796470 | ID=Msa1080360-mRNA-1:cds;Parent=Msa1080360-mRNA-1 |
| chr7_2 | CDS | 79795714 | 79795854 | 79795714 | ID=Msa1080360-mRNA-1:cds;Parent=Msa1080360-mRNA-1 |
| chr7_2 | CDS | 79795303 | 79795552 | 79795303 | ID=Msa1080360-mRNA-1:cds;Parent=Msa1080360-mRNA-1 |
| chr7_2 | three_prime_UTR | 79795053 | 79795302 | 79795053 | ID=Msa1080360-mRNA-1:three_prime_utr;Parent=Msa1080360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
