Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125870 | XP_024625398.1 | 95.399 | 326 | 15 | 0 | 1 | 326 | 1 | 326 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125870 | sp|Q8K4F5|ABHDB_MOUSE | 24.296 | 284 | 168 | 9 | 50 | 324 | 62 | 307 | 5.51e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125870 | A0A396H607 | 95.399 | 326 | 15 | 0 | 1 | 326 | 1 | 326 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026730 | Msa1125870 | 0.807958 | 3.919397e-50 | -8.615850e-47 |
| Msa0384880 | Msa1125870 | 0.809233 | 2.094217e-50 | -8.615850e-47 |
| Msa0389510 | Msa1125870 | 0.801872 | 7.334036e-49 | -8.615850e-47 |
| Msa1080360 | Msa1125870 | 0.950545 | 1.320254e-108 | -8.615850e-47 |
| Msa1125870 | Msa1234980 | 0.800370 | 1.488064e-48 | -8.615850e-47 |
| Msa0580230 | Msa1125870 | 0.800803 | 1.214194e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125870 | MtrunA17_Chr7g0266671 | 95.399 | 326 | 15 | 0 | 1 | 326 | 1 | 326 | 0.0 | 617 |
| Msa1125870 | MtrunA17_Chr5g0396251 | 35.764 | 288 | 161 | 8 | 44 | 323 | 107 | 378 | 2.75e-51 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125870 | AT3G52570.1 | 58.410 | 327 | 129 | 3 | 5 | 325 | 7 | 332 | 9.94e-123 | 356 |
| Msa1125870 | AT4G10030.1 | 37.209 | 301 | 162 | 10 | 34 | 326 | 97 | 378 | 3.72e-55 | 184 |
Find 101 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCGAAAGATTTGGCGAATT+TGG | 0.132425 | 7_3:-77337770 | Msa1125870:CDS |
| TACTATTTATATAAATTTAT+TGG | 0.170965 | 7_3:-77334197 | Msa1125870:three_prime_UTR |
| CGTGATCACCAACTTTCTTT+AGG | 0.267112 | 7_3:+77334786 | None:intergenic |
| TCTTGGCCTGAAGTTGTTAT+TGG | 0.294151 | 7_3:-77337730 | Msa1125870:CDS |
| GGTTAATACGGCGAAAGATT+TGG | 0.298952 | 7_3:-77337779 | Msa1125870:CDS |
| AGTTGTAGGAATGGTGATTA+TGG | 0.319309 | 7_3:-77337667 | Msa1125870:CDS |
| TTCTTCCAAATGCCGGTCAT+TGG | 0.320481 | 7_3:-77334386 | Msa1125870:CDS |
| TAAATTGATTATAACTGTTT+TGG | 0.330792 | 7_3:+77334171 | None:intergenic |
| ACTTGATCCGCCTCATGATT+TGG | 0.332755 | 7_3:-77337800 | Msa1125870:CDS |
| TTCAGTTTGCTCATAGTTGT+AGG | 0.335712 | 7_3:-77337681 | Msa1125870:CDS |
| AAAATCCTATTGGAATCTAT+TGG | 0.362283 | 7_3:-77334547 | Msa1125870:CDS |
| AGGAGATGTTCAATTCTTAC+TGG | 0.363284 | 7_3:-77334733 | Msa1125870:intron |
| ATGACAAATATGAATATTCC+TGG | 0.365801 | 7_3:+77334079 | None:intergenic |
| TGAAGAACAGCTTTGGGTAT+TGG | 0.372889 | 7_3:-77335589 | Msa1125870:intron |
| TTTCCAATGGTCACTTCTCC+CGG | 0.373866 | 7_3:+77335558 | None:intergenic |
| GTGGAAGTGTAAGGTTTATC+TGG | 0.385086 | 7_3:+77338060 | None:intergenic |
| AATAAATTTATATAAATAGT+AGG | 0.390740 | 7_3:+77334199 | None:intergenic |
| TTCTGCTCAGTGGCCTAAAC+AGG | 0.392108 | 7_3:-77337641 | Msa1125870:intron |
| GCCTCATGATTTGGTTAATA+CGG | 0.400813 | 7_3:-77337791 | Msa1125870:CDS |
| GTTCTCCAATAGATTCCAAT+AGG | 0.401373 | 7_3:+77334542 | None:intergenic |
| GAATGTCCAATAACAACTTC+AGG | 0.402152 | 7_3:+77337724 | None:intergenic |
| GTGGCTCTTGGGTCATCTGA+TGG | 0.406051 | 7_3:-77334852 | Msa1125870:CDS |
| TATTTATTCAATTATGAGGT+GGG | 0.407657 | 7_3:+77334103 | None:intergenic |
| TTGGGTCATCTGATGGGACT+TGG | 0.414061 | 7_3:-77334845 | Msa1125870:CDS |
| TTCTGTGTTCTTCCAAATGC+CGG | 0.414549 | 7_3:-77334393 | Msa1125870:CDS |
| TGAACCCAATGACCGGCATT+TGG | 0.420410 | 7_3:+77334381 | None:intergenic |
| AACACAAGAACTTTCAATGA+TGG | 0.432897 | 7_3:+77334271 | None:intergenic |
| ACAATCTCAAGAAGTCCCTT+TGG | 0.439903 | 7_3:+77334348 | None:intergenic |
| ACTCTAAGACATTGGCAGAT+TGG | 0.441228 | 7_3:-77334820 | Msa1125870:CDS |
| TCTTCCAAATGCCGGTCATT+GGG | 0.443078 | 7_3:-77334385 | Msa1125870:CDS |
| ATTACGGCGGTGGAAGTGTA+AGG | 0.451965 | 7_3:+77338051 | None:intergenic |
| ACGTGATTCTTCGTAGGCTA+TGG | 0.452817 | 7_3:+77338089 | None:intergenic |
| TGGGTATTGGATTCTGTCCC+GGG | 0.454373 | 7_3:-77335576 | Msa1125870:CDS |
| TGAAAGCTGAAGGTTGGTCT+TGG | 0.455344 | 7_3:-77337747 | Msa1125870:CDS |
| TTGGGTATTGGATTCTGTCC+CGG | 0.455850 | 7_3:-77335577 | Msa1125870:CDS |
| TGGGTATTTATTCAATTATG+AGG | 0.462919 | 7_3:+77334099 | None:intergenic |
| GGATCCTCTCAATAGCCTCC+TGG | 0.465957 | 7_3:+77334463 | None:intergenic |
| ATCACCAACTTTCTTTAGGT+TGG | 0.465985 | 7_3:+77334790 | None:intergenic |
| GGAGAACCCTCCACAGGGTA+TGG | 0.466329 | 7_3:-77334526 | Msa1125870:CDS |
| CATCTTGAACGAAGGCGAAT+CGG | 0.466642 | 7_3:+77338120 | None:intergenic |
| TGGCTCTTGGGTCATCTGAT+GGG | 0.466721 | 7_3:-77334851 | Msa1125870:CDS |
| GAAAGATCTCCAGTTTCTGC+TGG | 0.471414 | 7_3:+77338008 | None:intergenic |
| GAGGTGGGGTATGATAAATT+AGG | 0.479149 | 7_3:+77334118 | None:intergenic |
| GAATTAAAGAGATGCCATCT+TGG | 0.486770 | 7_3:+77334320 | None:intergenic |
| TAGAGTCTCACTTTCGAGAT+GGG | 0.490614 | 7_3:+77335478 | None:intergenic |
| AGTTGTTATTGGACATTCCA+TGG | 0.498142 | 7_3:-77337719 | Msa1125870:CDS |
| GGAAACCTTTCCGACAGAAT+CGG | 0.500457 | 7_3:+77334416 | None:intergenic |
| GAGAATTCGTAACTGGAAGA+TGG | 0.512996 | 7_3:+77337949 | None:intergenic |
| GTCCACATGAACCCAATGAC+CGG | 0.514151 | 7_3:+77334374 | None:intergenic |
| CGATTCGCCTTCGTTCAAGA+TGG | 0.517918 | 7_3:-77338119 | Msa1125870:CDS |
| ACTGGAAGATGGAGAGCGAT+TGG | 0.520320 | 7_3:+77337960 | None:intergenic |
| TGGACATTCCATGGGTGGAA+AGG | 0.521856 | 7_3:-77337710 | Msa1125870:CDS |
| TTTCGAGATGGGATTTGTGA+TGG | 0.524571 | 7_3:+77335489 | None:intergenic |
| GGACGCTGTGTGTGGATATG+AGG | 0.532087 | 7_3:-77337849 | Msa1125870:CDS |
| TGTGTGGATATGAGGAATCA+TGG | 0.535687 | 7_3:-77337841 | Msa1125870:CDS |
| ATTTATTCAATTATGAGGTG+GGG | 0.536314 | 7_3:+77334104 | None:intergenic |
| TGAGATTGTAGCTTCCAAGA+TGG | 0.538105 | 7_3:-77334334 | Msa1125870:CDS |
| GTCCCGGGAGAAGTGACCAT+TGG | 0.542662 | 7_3:-77335561 | Msa1125870:CDS |
| TTTGCTCATAGTTGTAGGAA+TGG | 0.546407 | 7_3:-77337676 | Msa1125870:CDS |
| ACTTGGTTACTCTAAGACAT+TGG | 0.549629 | 7_3:-77334828 | Msa1125870:CDS |
| GCCATGGATGATTACGGCGG+TGG | 0.550052 | 7_3:+77338041 | None:intergenic |
| GTGCTGAAAAGAGTGATAGA+TGG | 0.552429 | 7_3:-77334488 | Msa1125870:CDS |
| TTCTGAACATTGAGCAGATG+AGG | 0.553710 | 7_3:-77334236 | Msa1125870:three_prime_UTR |
| ATTTGGTGAAAGCTGAAGGT+TGG | 0.556142 | 7_3:-77337753 | Msa1125870:CDS |
| GGCACCAACCTAAAGAAAGT+TGG | 0.557272 | 7_3:-77334794 | Msa1125870:CDS |
| CTATTTCCATACCCTGTGGA+GGG | 0.557659 | 7_3:+77334520 | None:intergenic |
| ATAGAGTCTCACTTTCGAGA+TGG | 0.560037 | 7_3:+77335477 | None:intergenic |
| GCCGAATAAAACAGAAAGAG+TGG | 0.560720 | 7_3:-77338222 | Msa1125870:five_prime_UTR |
| AAGACATTGGCAGATTGGAT+AGG | 0.563902 | 7_3:-77334815 | Msa1125870:CDS |
| ATTTGATCTTCAAAGTGCTA+AGG | 0.566081 | 7_3:-77334753 | Msa1125870:CDS |
| AAGAGCAACCTTTCCACCCA+TGG | 0.567060 | 7_3:+77337702 | None:intergenic |
| TCTATTGGAGAACCCTCCAC+AGG | 0.567386 | 7_3:-77334532 | Msa1125870:CDS |
| GAACATTGAGCAGATGAGGT+TGG | 0.568806 | 7_3:-77334232 | Msa1125870:three_prime_UTR |
| GTATTTATTCAATTATGAGG+TGG | 0.575886 | 7_3:+77334102 | None:intergenic |
| TTCCAATGGTCACTTCTCCC+GGG | 0.576498 | 7_3:+77335559 | None:intergenic |
| TGCCGGTCATTGGGTTCATG+TGG | 0.578598 | 7_3:-77334376 | Msa1125870:CDS |
| TTGAGCACGTGATTCTTCGT+AGG | 0.580697 | 7_3:+77338083 | None:intergenic |
| TGCTGAAAAGAGTGATAGAT+GGG | 0.581828 | 7_3:-77334487 | Msa1125870:CDS |
| GCGAATTTGGTGAAAGCTGA+AGG | 0.582384 | 7_3:-77337757 | Msa1125870:CDS |
| ACTATTTCCATACCCTGTGG+AGG | 0.584880 | 7_3:+77334519 | None:intergenic |
| GTTGTTATTGGACATTCCAT+GGG | 0.586261 | 7_3:-77337718 | Msa1125870:CDS |
| TGACAAATATGAATATTCCT+GGG | 0.587562 | 7_3:+77334080 | None:intergenic |
| GTTATTGGACATTCCATGGG+TGG | 0.598670 | 7_3:-77337715 | Msa1125870:CDS |
| GGTTCATGTGGACAATCCAA+AGG | 0.603499 | 7_3:-77334364 | Msa1125870:CDS |
| TTTCGATCCATCTTGAACGA+AGG | 0.604973 | 7_3:+77338112 | None:intergenic |
| GTTCATGTGGACAATCCAAA+GGG | 0.605431 | 7_3:-77334363 | Msa1125870:CDS |
| AGGAACCGATTCTGTCGGAA+AGG | 0.606920 | 7_3:-77334421 | Msa1125870:CDS |
| AAAGAGTGATAGATGGGACC+AGG | 0.610094 | 7_3:-77334481 | Msa1125870:CDS |
| GAGGAATCATGGAAAATCAA+CGG | 0.611873 | 7_3:-77337830 | Msa1125870:CDS |
| TCCACCGCCGTAATCATCCA+TGG | 0.623414 | 7_3:-77338042 | Msa1125870:CDS |
| GGCATTTGGAAGAACACAGA+AGG | 0.626381 | 7_3:+77334395 | None:intergenic |
| GCCGTATTAACCAAATCATG+AGG | 0.644237 | 7_3:+77337790 | None:intergenic |
| TCATAATTGAATAAATACCC+AGG | 0.647327 | 7_3:-77334097 | Msa1125870:three_prime_UTR |
| ATTATGGAGATTCTGCTCAG+TGG | 0.651854 | 7_3:-77337651 | Msa1125870:CDS |
| CTATTGGAGAACCCTCCACA+GGG | 0.666022 | 7_3:-77334531 | Msa1125870:CDS |
| GGGACCAGGAGGCTATTGAG+AGG | 0.666431 | 7_3:-77334467 | Msa1125870:CDS |
| ATTACTATTTCCATACCCTG+TGG | 0.679313 | 7_3:+77334516 | None:intergenic |
| GAGTGATAGATGGGACCAGG+AGG | 0.682813 | 7_3:-77334478 | Msa1125870:CDS |
| AGATTGGAGGACGCTGTGTG+TGG | 0.700391 | 7_3:-77337857 | Msa1125870:CDS |
| GTATTAACCAAATCATGAGG+CGG | 0.708208 | 7_3:+77337793 | None:intergenic |
| AAAGCCATGGATGATTACGG+CGG | 0.754027 | 7_3:+77338038 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTATTTTGTTTTAGTTT+TGG | - | chr7_3:77334410-77334429 | Msa1125870:CDS | 15.0% |
| !! | CTTATATTGAAGAAATTATT+TGG | - | chr7_3:77335000-77335019 | Msa1125870:intron | 15.0% |
| !!! | AAATTTTTAGGAGAAAAAAT+GGG | - | chr7_3:77335844-77335863 | Msa1125870:intron | 15.0% |
| !! | TCATATTATTAAAAGATGTT+TGG | - | chr7_3:77336023-77336042 | Msa1125870:intron | 15.0% |
| !!! | GATTTTTTTATTTGGTTTTT+GGG | + | chr7_3:77336239-77336258 | None:intergenic | 15.0% |
| !!! | TGATTTTTTTATTTGGTTTT+TGG | + | chr7_3:77336240-77336259 | None:intergenic | 15.0% |
| !!! | TGTAGATTTTAATTTATTAG+AGG | - | chr7_3:77336422-77336441 | Msa1125870:intron | 15.0% |
| !!! | GTAAATAATTTGTATATTGA+TGG | - | chr7_3:77336981-77337000 | Msa1125870:intron | 15.0% |
| !!! | TAAATTGATTATAACTGTTT+TGG | + | chr7_3:77338127-77338146 | None:intergenic | 15.0% |
| !! | AGCAGAGAAAAAAAAAAAAA+TGG | - | chr7_3:77334096-77334115 | Msa1125870:three_prime_UTR | 20.0% |
| !! | AGAGAAAAAAAAAAAAATGG+CGG | - | chr7_3:77334099-77334118 | Msa1125870:three_prime_UTR | 20.0% |
| !! | ATATATTAGAAATTACAGAG+AGG | - | chr7_3:77334854-77334873 | Msa1125870:CDS | 20.0% |
| !! | AATAAGCTGAAAATAACATA+TGG | - | chr7_3:77334889-77334908 | Msa1125870:intron | 20.0% |
| !!! | AAGTTTTGATTAATTAACCA+GGG | + | chr7_3:77334983-77335002 | None:intergenic | 20.0% |
| !!! | TAAGTTTTGATTAATTAACC+AGG | + | chr7_3:77334984-77335003 | None:intergenic | 20.0% |
| !! | TAGAGATAATAAAAGAAGAA+AGG | + | chr7_3:77335288-77335307 | None:intergenic | 20.0% |
| !!! | GAAATTTTTAGGAGAAAAAA+TGG | - | chr7_3:77335843-77335862 | Msa1125870:intron | 20.0% |
| !!! | CATGTTAATTTTGCTATTTT+TGG | + | chr7_3:77336185-77336204 | None:intergenic | 20.0% |
| !! | AAATAGCAAAATTAACATGA+AGG | - | chr7_3:77336186-77336205 | Msa1125870:intron | 20.0% |
| !! | TAAATCGCAATTCATAAATT+GGG | + | chr7_3:77336289-77336308 | None:intergenic | 20.0% |
| !! | TTAAATCGCAATTCATAAAT+TGG | + | chr7_3:77336290-77336309 | None:intergenic | 20.0% |
| !! | AAAGCATATATGTTTCTTAA+AGG | + | chr7_3:77336333-77336352 | None:intergenic | 20.0% |
| !!! | ATTTAAAGCGTTTTTAGTAT+AGG | - | chr7_3:77336555-77336574 | Msa1125870:intron | 20.0% |
| !! | GTTACAATTAAATAATGAAC+TGG | + | chr7_3:77336667-77336686 | None:intergenic | 20.0% |
| !! | TTAAAAGTTATGAACAAAAG+AGG | + | chr7_3:77337015-77337034 | None:intergenic | 20.0% |
| !!! | TTGTTTTATTTGAACTATTG+CGG | - | chr7_3:77337998-77338017 | Msa1125870:CDS | 20.0% |
| !! | TATTTATTCAATTATGAGGT+GGG | + | chr7_3:77338195-77338214 | None:intergenic | 20.0% |
| ! | AAGTATTATTACAACGATGA+AGG | + | chr7_3:77335083-77335102 | None:intergenic | 25.0% |
| ! | AGAAGAAAGGACTAATATTA+AGG | + | chr7_3:77335275-77335294 | None:intergenic | 25.0% |
| ! | TCATAACATCATGAGTTATT+AGG | - | chr7_3:77335449-77335468 | Msa1125870:intron | 25.0% |
| ! | CATAACATCATGAGTTATTA+GGG | - | chr7_3:77335450-77335469 | Msa1125870:intron | 25.0% |
| !! | GGTTATGAAAATTCAGTTTT+TGG | + | chr7_3:77335574-77335593 | None:intergenic | 25.0% |
| !! | TTGTTGCTATAGTTTGTAAT+AGG | + | chr7_3:77335925-77335944 | None:intergenic | 25.0% |
| !!! | CTGTATTTTTGAACTGATTT+GGG | + | chr7_3:77336085-77336104 | None:intergenic | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | + | chr7_3:77336462-77336481 | None:intergenic | 25.0% |
| ! | ACATGGAAGATAATAGTTTA+CGG | + | chr7_3:77336844-77336863 | None:intergenic | 25.0% |
| ! | AAAAGAAAATGGAGAAACTA+AGG | + | chr7_3:77337234-77337253 | None:intergenic | 25.0% |
| ! | TTTAGATATTAGACGACAAT+TGG | + | chr7_3:77337270-77337289 | None:intergenic | 25.0% |
| ! | TAACACTGTTCAATTACAAT+TGG | + | chr7_3:77337344-77337363 | None:intergenic | 25.0% |
| ! | AAAATCCTATTGGAATCTAT+TGG | - | chr7_3:77337748-77337767 | Msa1125870:CDS | 25.0% |
| ! | ATTTATTCAATTATGAGGTG+GGG | + | chr7_3:77338194-77338213 | None:intergenic | 25.0% |
| ! | GTATTTATTCAATTATGAGG+TGG | + | chr7_3:77338196-77338215 | None:intergenic | 25.0% |
| ! | TGGGTATTTATTCAATTATG+AGG | + | chr7_3:77338199-77338218 | None:intergenic | 25.0% |
| ! | TCATAATTGAATAAATACCC+AGG | - | chr7_3:77338198-77338217 | Msa1125870:exon | 25.0% |
| ! | TGACAAATATGAATATTCCT+GGG | + | chr7_3:77338218-77338237 | None:intergenic | 25.0% |
| ! | ATGACAAATATGAATATTCC+TGG | + | chr7_3:77338219-77338238 | None:intergenic | 25.0% |
| !! | TCCACTCTTTCTGTTTTATT+CGG | + | chr7_3:77334077-77334096 | None:intergenic | 30.0% |
| TAAAAGAGAGAATTCGTAAC+TGG | + | chr7_3:77334356-77334375 | None:intergenic | 30.0% | |
| TTCAGAAGAAAAACCTGTTT+AGG | + | chr7_3:77334670-77334689 | None:intergenic | 30.0% | |
| ATTATTTGGCAATGAACAAG+TGG | - | chr7_3:77335014-77335033 | Msa1125870:intron | 30.0% | |
| ATTGTTGTGAATATAGCAGT+AGG | - | chr7_3:77335049-77335068 | Msa1125870:intron | 30.0% | |
| ! | TCTTTCGTTTATCTCTGAAA+AGG | + | chr7_3:77335217-77335236 | None:intergenic | 30.0% |
| CTACTAAAATCTTGTGAGTA+AGG | - | chr7_3:77335544-77335563 | Msa1125870:CDS | 30.0% | |
| AAATGTAGTGAACAAAGTAG+TGG | - | chr7_3:77335698-77335717 | Msa1125870:intron | 30.0% | |
| AATGTAGTGAACAAAGTAGT+GGG | - | chr7_3:77335699-77335718 | Msa1125870:intron | 30.0% | |
| GTTTAGAAAGTTAGTGTCTT+TGG | - | chr7_3:77335811-77335830 | Msa1125870:intron | 30.0% | |
| ! | GGTGAGAATGAGAAATTTTT+AGG | - | chr7_3:77335832-77335851 | Msa1125870:intron | 30.0% |
| !! | GCTGTATTTTTGAACTGATT+TGG | + | chr7_3:77336086-77336105 | None:intergenic | 30.0% |
| ATGCTGCCTTAGAAAAAATT+GGG | + | chr7_3:77336128-77336147 | None:intergenic | 30.0% | |
| !!! | CTGGGTCTGATTTTTTTATT+TGG | + | chr7_3:77336247-77336266 | None:intergenic | 30.0% |
| TTTATTAGAGGTCAATGAGT+TGG | - | chr7_3:77336434-77336453 | Msa1125870:intron | 30.0% | |
| ! | TGGTTTTTGATAGAACACTA+TGG | - | chr7_3:77336466-77336485 | Msa1125870:intron | 30.0% |
| !! | TTCATCACTTTTGTTTCCAA+TGG | + | chr7_3:77336753-77336772 | None:intergenic | 30.0% |
| !!! | ACGTGATGTTTTAATGACTT+TGG | - | chr7_3:77336775-77336794 | Msa1125870:intron | 30.0% |
| GTAGCTTCATAAAACACAAA+AGG | + | chr7_3:77337084-77337103 | None:intergenic | 30.0% | |
| TTTGTACCTTACCATAATCA+CGG | + | chr7_3:77337106-77337125 | None:intergenic | 30.0% | |
| ! | TTTCTCCATTTTCTTTTGTG+AGG | - | chr7_3:77337237-77337256 | Msa1125870:intron | 30.0% |
| ! | ATTTGATCTTCAAAGTGCTA+AGG | - | chr7_3:77337542-77337561 | Msa1125870:intron | 30.0% |
| !! | CCTACAGAATTTTAACATTC+GGG | + | chr7_3:77337726-77337745 | None:intergenic | 30.0% |
| !! | CCCTACAGAATTTTAACATT+CGG | + | chr7_3:77337727-77337746 | None:intergenic | 30.0% |
| CCGAATGTTAAAATTCTGTA+GGG | - | chr7_3:77337724-77337743 | Msa1125870:CDS | 30.0% | |
| !!! | CTTTTTGACTAGCTAGTTTT+TGG | + | chr7_3:77337856-77337875 | None:intergenic | 30.0% |
| CAAAAACTAGCTAGTCAAAA+AGG | - | chr7_3:77337854-77337873 | Msa1125870:CDS | 30.0% | |
| AACACAAGAACTTTCAATGA+TGG | + | chr7_3:77338027-77338046 | None:intergenic | 30.0% | |
| CAAAAAGCCATGGATGATTA+CGG | + | chr7_3:77334263-77334282 | None:intergenic | 35.0% | |
| ! | GTAATCATCCATGGCTTTTT+GGG | - | chr7_3:77334262-77334281 | Msa1125870:three_prime_UTR | 35.0% |
| !!! | TTTAGTTTTGGTGTGCAGAT+TGG | - | chr7_3:77334422-77334441 | Msa1125870:CDS | 35.0% |
| GAGGAATCATGGAAAATCAA+CGG | - | chr7_3:77334465-77334484 | Msa1125870:CDS | 35.0% | |
| GTATTAACCAAATCATGAGG+CGG | + | chr7_3:77334505-77334524 | None:intergenic | 35.0% | |
| !! | GCCTCATGATTTGGTTAATA+CGG | - | chr7_3:77334504-77334523 | Msa1125870:CDS | 35.0% |
| GAATGTCCAATAACAACTTC+AGG | + | chr7_3:77334574-77334593 | None:intergenic | 35.0% | |
| ! | AGTTGTTATTGGACATTCCA+TGG | - | chr7_3:77334576-77334595 | Msa1125870:intron | 35.0% |
| ! | GTTGTTATTGGACATTCCAT+GGG | - | chr7_3:77334577-77334596 | Msa1125870:intron | 35.0% |
| ! | TTCAGTTTGCTCATAGTTGT+AGG | - | chr7_3:77334614-77334633 | Msa1125870:intron | 35.0% |
| TTTGCTCATAGTTGTAGGAA+TGG | - | chr7_3:77334619-77334638 | Msa1125870:intron | 35.0% | |
| AGTTGTAGGAATGGTGATTA+TGG | - | chr7_3:77334628-77334647 | Msa1125870:intron | 35.0% | |
| TTAGAAATTACAGAGAGGAG+AGG | - | chr7_3:77334859-77334878 | Msa1125870:intron | 35.0% | |
| ATCTACTGACATAACCCATT+GGG | + | chr7_3:77334956-77334975 | None:intergenic | 35.0% | |
| TATCTACTGACATAACCCAT+TGG | + | chr7_3:77334957-77334976 | None:intergenic | 35.0% | |
| TATGTCAGTAGATAAAACCC+TGG | - | chr7_3:77334963-77334982 | Msa1125870:intron | 35.0% | |
| ! | ATTGAGACTTGTGCTCTTTT+CGG | - | chr7_3:77335123-77335142 | Msa1125870:intron | 35.0% |
| !! | TAGTTTCTCCCTCTAAAATC+TGG | - | chr7_3:77335306-77335325 | Msa1125870:intron | 35.0% |
| ! | GATAACACCCAATTTGAGTT+GGG | + | chr7_3:77335339-77335358 | None:intergenic | 35.0% |
| TGATAACACCCAATTTGAGT+TGG | + | chr7_3:77335340-77335359 | None:intergenic | 35.0% | |
| ACTCTGATGATCAAGTTAGT+AGG | - | chr7_3:77335359-77335378 | Msa1125870:intron | 35.0% | |
| ACCTGACTAATATAGCCATT+TGG | - | chr7_3:77335426-77335445 | Msa1125870:intron | 35.0% | |
| ACCAAATGGCTATATTAGTC+AGG | + | chr7_3:77335430-77335449 | None:intergenic | 35.0% | |
| CTCATGATGTTATGACCAAA+TGG | + | chr7_3:77335444-77335463 | None:intergenic | 35.0% | |
| TAAAATCTTGTGAGTAAGGC+TGG | - | chr7_3:77335548-77335567 | Msa1125870:CDS | 35.0% | |
| ACTTTCTAAACCTCAGTAGA+TGG | + | chr7_3:77335802-77335821 | None:intergenic | 35.0% | |
| TGCTGCCTTAGAAAAAATTG+GGG | + | chr7_3:77336127-77336146 | None:intergenic | 35.0% | |
| CATGCTGCCTTAGAAAAAAT+TGG | + | chr7_3:77336129-77336148 | None:intergenic | 35.0% | |
| TCGCAATTCATAAATTGGGT+TGG | + | chr7_3:77336285-77336304 | None:intergenic | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr7_3:77336446-77336465 | Msa1125870:intron | 35.0% |
| TATCTTCCATGTTTGTGCTA+AGG | - | chr7_3:77336852-77336871 | Msa1125870:intron | 35.0% | |
| AGTACATACTCGGAAACATT+TGG | + | chr7_3:77337053-77337072 | None:intergenic | 35.0% | |
| GGTGGTATTTAGTACATACT+CGG | + | chr7_3:77337063-77337082 | None:intergenic | 35.0% | |
| GCTTCATAAAACACAAAAGG+TGG | + | chr7_3:77337081-77337100 | None:intergenic | 35.0% | |
| TTATGAAGCTACCGTGATTA+TGG | - | chr7_3:77337092-77337111 | Msa1125870:intron | 35.0% | |
| CAATTACAATTGGACACAGT+AGG | + | chr7_3:77337334-77337353 | None:intergenic | 35.0% | |
| AAGCCAACAGGAAAATAGAA+CGG | + | chr7_3:77337397-77337416 | None:intergenic | 35.0% | |
| AAAGTACATTTCAAGCCAAC+AGG | + | chr7_3:77337409-77337428 | None:intergenic | 35.0% | |
| !! | ACTTGGTTACTCTAAGACAT+TGG | - | chr7_3:77337467-77337486 | Msa1125870:intron | 35.0% |
| ATCACCAACTTTCTTTAGGT+TGG | + | chr7_3:77337508-77337527 | None:intergenic | 35.0% | |
| AGGAGATGTTCAATTCTTAC+TGG | - | chr7_3:77337562-77337581 | Msa1125870:intron | 35.0% | |
| !! | ATGTTACTTTCATGCTGTCA+CGG | + | chr7_3:77337702-77337721 | None:intergenic | 35.0% |
| CCCGAATGTTAAAATTCTGT+AGG | - | chr7_3:77337723-77337742 | Msa1125870:CDS | 35.0% | |
| TCTGTAGGGAAAAATCCTAT+TGG | - | chr7_3:77337738-77337757 | Msa1125870:CDS | 35.0% | |
| GTTCTCCAATAGATTCCAAT+AGG | + | chr7_3:77337756-77337775 | None:intergenic | 35.0% | |
| ATTACTATTTCCATACCCTG+TGG | + | chr7_3:77337782-77337801 | None:intergenic | 35.0% | |
| TGCTGAAAAGAGTGATAGAT+GGG | - | chr7_3:77337808-77337827 | Msa1125870:CDS | 35.0% | |
| GAATTAAAGAGATGCCATCT+TGG | + | chr7_3:77337978-77337997 | None:intergenic | 35.0% | |
| GCCGAATAAAACAGAAAGAG+TGG | - | chr7_3:77334073-77334092 | Msa1125870:three_prime_UTR | 40.0% | |
| TTTCGATCCATCTTGAACGA+AGG | + | chr7_3:77334186-77334205 | None:intergenic | 40.0% | |
| ! | GTGGAAGTGTAAGGTTTATC+TGG | + | chr7_3:77334238-77334257 | None:intergenic | 40.0% |
| ! | CGTAATCATCCATGGCTTTT+TGG | - | chr7_3:77334261-77334280 | Msa1125870:three_prime_UTR | 40.0% |
| GAGAATTCGTAACTGGAAGA+TGG | + | chr7_3:77334349-77334368 | None:intergenic | 40.0% | |
| TGTGTGGATATGAGGAATCA+TGG | - | chr7_3:77334454-77334473 | Msa1125870:CDS | 40.0% | |
| GCCGTATTAACCAAATCATG+AGG | + | chr7_3:77334508-77334527 | None:intergenic | 40.0% | |
| GGTTAATACGGCGAAAGATT+TGG | - | chr7_3:77334516-77334535 | Msa1125870:CDS | 40.0% | |
| ! | ATTTGGTGAAAGCTGAAGGT+TGG | - | chr7_3:77334542-77334561 | Msa1125870:CDS | 40.0% |
| TCTTGGCCTGAAGTTGTTAT+TGG | - | chr7_3:77334565-77334584 | Msa1125870:intron | 40.0% | |
| ATTATGGAGATTCTGCTCAG+TGG | - | chr7_3:77334644-77334663 | Msa1125870:intron | 40.0% | |
| ! | TTGAGACTTGTGCTCTTTTC+GGG | - | chr7_3:77335124-77335143 | Msa1125870:intron | 40.0% |
| !! | TCTTTTCGGGGTGAATTTGA+AGG | - | chr7_3:77335137-77335156 | Msa1125870:intron | 40.0% |
| TAAGGATAACTCTCAGCTCA+TGG | - | chr7_3:77335399-77335418 | Msa1125870:intron | 40.0% | |
| CGGACAACTGAATAACTATC+TGG | + | chr7_3:77335481-77335500 | None:intergenic | 40.0% | |
| TTAATATAGCCTAGCACGTG+TGG | + | chr7_3:77335520-77335539 | None:intergenic | 40.0% | |
| CCAGTGCTAATTGTGATTCA+TGG | + | chr7_3:77335595-77335614 | None:intergenic | 40.0% | |
| CCATGAATCACAATTAGCAC+TGG | - | chr7_3:77335592-77335611 | Msa1125870:intron | 40.0% | |
| TCCTTACTTGTGCATTCTCA+TGG | + | chr7_3:77335648-77335667 | None:intergenic | 40.0% | |
| ATGAGAATGCACAAGTAAGG+AGG | - | chr7_3:77335647-77335666 | Msa1125870:intron | 40.0% | |
| AAGTAAGGAGGAAGGAACTA+GGG | - | chr7_3:77335659-77335678 | Msa1125870:intron | 40.0% | |
| AGGAGAAAAAATGGGTCAGA+AGG | - | chr7_3:77335852-77335871 | Msa1125870:intron | 40.0% | |
| AATAGGCTGCTGCATATTCT+TGG | + | chr7_3:77335908-77335927 | None:intergenic | 40.0% | |
| TAGCAACAAGTTGTCTTTGC+AGG | - | chr7_3:77335936-77335955 | Msa1125870:intron | 40.0% | |
| !!! | TGCAGCCCCAATTTTTTCTA+AGG | - | chr7_3:77336119-77336138 | Msa1125870:intron | 40.0% |
| AAATCAGACCCAGATAGAAC+TGG | - | chr7_3:77336254-77336273 | Msa1125870:intron | 40.0% | |
| TGGTTGTACCAGTTCTATCT+GGG | + | chr7_3:77336265-77336284 | None:intergenic | 40.0% | |
| TTGGTTGTACCAGTTCTATC+TGG | + | chr7_3:77336266-77336285 | None:intergenic | 40.0% | |
| CCTGAGAAGAGGATAGAAAA+TGG | + | chr7_3:77336356-77336375 | None:intergenic | 40.0% | |
| ! | CCATTTTCTATCCTCTTCTC+AGG | - | chr7_3:77336353-77336372 | Msa1125870:intron | 40.0% |
| GACATAGAAAACCTGAGAAG+AGG | + | chr7_3:77336367-77336386 | None:intergenic | 40.0% | |
| GACTAACACTCTCTGTATGT+TGG | - | chr7_3:77336577-77336596 | Msa1125870:intron | 40.0% | |
| GGCTTACTACAACTATCTAG+TGG | - | chr7_3:77336598-77336617 | Msa1125870:intron | 40.0% | |
| ! | GCGCTTATATTTTTCACTGC+TGG | - | chr7_3:77336637-77336656 | Msa1125870:intron | 40.0% |
| !! | TGAAGAACAGCTTTGGGTAT+TGG | - | chr7_3:77336706-77336725 | Msa1125870:intron | 40.0% |
| TTTCGAGATGGGATTTGTGA+TGG | + | chr7_3:77336809-77336828 | None:intergenic | 40.0% | |
| TAGAGTCTCACTTTCGAGAT+GGG | + | chr7_3:77336820-77336839 | None:intergenic | 40.0% | |
| ATAGAGTCTCACTTTCGAGA+TGG | + | chr7_3:77336821-77336840 | None:intergenic | 40.0% | |
| TGACAACCTTAGCACAAACA+TGG | + | chr7_3:77336861-77336880 | None:intergenic | 40.0% | |
| TTTGTGCTAAGGTTGTCAAG+AGG | - | chr7_3:77336863-77336882 | Msa1125870:intron | 40.0% | |
| AAGCTACCGTGATTATGGTA+AGG | - | chr7_3:77337097-77337116 | Msa1125870:intron | 40.0% | |
| CACAGCCTCACAAAAGAAAA+TGG | + | chr7_3:77337245-77337264 | None:intergenic | 40.0% | |
| GAAAATAGAACGGAACATGG+AGG | + | chr7_3:77337387-77337406 | None:intergenic | 40.0% | |
| CAGGAAAATAGAACGGAACA+TGG | + | chr7_3:77337390-77337409 | None:intergenic | 40.0% | |
| ! | GTTCCGTTCTATTTTCCTGT+TGG | - | chr7_3:77337391-77337410 | Msa1125870:intron | 40.0% |
| ! | TGTACTTTGTGCCTCTTTTC+AGG | - | chr7_3:77337421-77337440 | Msa1125870:intron | 40.0% |
| !! | ACTCTAAGACATTGGCAGAT+TGG | - | chr7_3:77337475-77337494 | Msa1125870:intron | 40.0% |
| AAGACATTGGCAGATTGGAT+AGG | - | chr7_3:77337480-77337499 | Msa1125870:intron | 40.0% | |
| CGTGATCACCAACTTTCTTT+AGG | + | chr7_3:77337512-77337531 | None:intergenic | 40.0% | |
| GTGCTGAAAAGAGTGATAGA+TGG | - | chr7_3:77337807-77337826 | Msa1125870:CDS | 40.0% | |
| ! | CAAAAAGGAACCGATTCTGT+CGG | - | chr7_3:77337869-77337888 | Msa1125870:intron | 40.0% |
| TTCTGTGTTCTTCCAAATGC+CGG | - | chr7_3:77337902-77337921 | Msa1125870:intron | 40.0% | |
| GTTCATGTGGACAATCCAAA+GGG | - | chr7_3:77337932-77337951 | Msa1125870:intron | 40.0% | |
| ACAATCTCAAGAAGTCCCTT+TGG | + | chr7_3:77337950-77337969 | None:intergenic | 40.0% | |
| TGAGATTGTAGCTTCCAAGA+TGG | - | chr7_3:77337961-77337980 | Msa1125870:intron | 40.0% | |
| TTCTGAACATTGAGCAGATG+AGG | - | chr7_3:77338059-77338078 | Msa1125870:CDS | 40.0% | |
| GAGGTGGGGTATGATAAATT+AGG | + | chr7_3:77338180-77338199 | None:intergenic | 40.0% | |
| CATCTTGAACGAAGGCGAAT+CGG | + | chr7_3:77334178-77334197 | None:intergenic | 45.0% | |
| ACGTGATTCTTCGTAGGCTA+TGG | + | chr7_3:77334209-77334228 | None:intergenic | 45.0% | |
| TTGAGCACGTGATTCTTCGT+AGG | + | chr7_3:77334215-77334234 | None:intergenic | 45.0% | |
| AAAGCCATGGATGATTACGG+CGG | + | chr7_3:77334260-77334279 | None:intergenic | 45.0% | |
| !!! | TTTTGGGATCCAGCAGAAAC+TGG | - | chr7_3:77334278-77334297 | Msa1125870:three_prime_UTR | 45.0% |
| GAAAGATCTCCAGTTTCTGC+TGG | + | chr7_3:77334290-77334309 | None:intergenic | 45.0% | |
| !! | AGTTTTGGTGTGCAGATTGG+AGG | - | chr7_3:77334425-77334444 | Msa1125870:CDS | 45.0% |
| ACTTGATCCGCCTCATGATT+TGG | - | chr7_3:77334495-77334514 | Msa1125870:CDS | 45.0% | |
| GGCGAAAGATTTGGCGAATT+TGG | - | chr7_3:77334525-77334544 | Msa1125870:CDS | 45.0% | |
| ! | GCGAATTTGGTGAAAGCTGA+AGG | - | chr7_3:77334538-77334557 | Msa1125870:CDS | 45.0% |
| !! | TGAAAGCTGAAGGTTGGTCT+TGG | - | chr7_3:77334548-77334567 | Msa1125870:CDS | 45.0% |
| GTTATTGGACATTCCATGGG+TGG | - | chr7_3:77334580-77334599 | Msa1125870:intron | 45.0% | |
| TCTCCTTAACTGTCTCCCAA+TGG | - | chr7_3:77334938-77334957 | Msa1125870:intron | 45.0% | |
| CTCCTTAACTGTCTCCCAAT+GGG | - | chr7_3:77334939-77334958 | Msa1125870:intron | 45.0% | |
| AACCCATTGGGAGACAGTTA+AGG | + | chr7_3:77334944-77334963 | None:intergenic | 45.0% | |
| ! | TGAGACTTGTGCTCTTTTCG+GGG | - | chr7_3:77335125-77335144 | Msa1125870:intron | 45.0% |
| TTTCGGGGTGAATTTGAAGG+TGG | - | chr7_3:77335140-77335159 | Msa1125870:intron | 45.0% | |
| GGTGAATTTGAAGGTGGTTG+CGG | - | chr7_3:77335146-77335165 | Msa1125870:intron | 45.0% | |
| TCTAAGCTAGCTAGAGTGAG+GGG | + | chr7_3:77335194-77335213 | None:intergenic | 45.0% | |
| GTCTAAGCTAGCTAGAGTGA+GGG | + | chr7_3:77335195-77335214 | None:intergenic | 45.0% | |
| !! | TCCCTCTAAAATCTGGAGTG+AGG | - | chr7_3:77335313-77335332 | Msa1125870:intron | 45.0% |
| ! | GCCTCACTCCAGATTTTAGA+GGG | + | chr7_3:77335317-77335336 | None:intergenic | 45.0% |
| AGTGAGGCCCAACTCAAATT+GGG | - | chr7_3:77335329-77335348 | Msa1125870:intron | 45.0% | |
| GCGTATATGAGTGAGCGATA+AGG | - | chr7_3:77335381-77335400 | Msa1125870:intron | 45.0% | |
| TAGTAGGTCAAGGGTGGTAA+GGG | + | chr7_3:77335618-77335637 | None:intergenic | 45.0% | |
| ! | TTCTCATGGCTTGTGGTAGT+AGG | + | chr7_3:77335634-77335653 | None:intergenic | 45.0% |
| TTGTGCATTCTCATGGCTTG+TGG | + | chr7_3:77335641-77335660 | None:intergenic | 45.0% | |
| GCCATGAGAATGCACAAGTA+AGG | - | chr7_3:77335644-77335663 | Msa1125870:intron | 45.0% | |
| GAATGCACAAGTAAGGAGGA+AGG | - | chr7_3:77335651-77335670 | Msa1125870:intron | 45.0% | |
| CAAGTAAGGAGGAAGGAACT+AGG | - | chr7_3:77335658-77335677 | Msa1125870:intron | 45.0% | |
| ATGACTACAATGCAGCAGCA+GGG | - | chr7_3:77335729-77335748 | Msa1125870:intron | 45.0% | |
| GAAAAAATGGGTCAGAAGGC+TGG | - | chr7_3:77335856-77335875 | Msa1125870:intron | 45.0% | |
| CTGCATATTCTTGGCAACGT+TGG | + | chr7_3:77335899-77335918 | None:intergenic | 45.0% | |
| GGCTTCTTCAGAACAAAGCA+TGG | - | chr7_3:77336044-77336063 | Msa1125870:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr7_3:77336515-77336534 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr7_3:77336516-77336535 | None:intergenic | 45.0% |
| TCTCTGCTGAAGAACAGCTT+TGG | - | chr7_3:77336699-77336718 | Msa1125870:intron | 45.0% | |
| CTCTGCTGAAGAACAGCTTT+GGG | - | chr7_3:77336700-77336719 | Msa1125870:intron | 45.0% | |
| !! | TTGGGTATTGGATTCTGTCC+CGG | - | chr7_3:77336718-77336737 | Msa1125870:intron | 45.0% |
| TTTCCAATGGTCACTTCTCC+CGG | + | chr7_3:77336740-77336759 | None:intergenic | 45.0% | |
| !! | ACTTTGTGCCTCTTTTCAGG+TGG | - | chr7_3:77337424-77337443 | Msa1125870:intron | 45.0% |
| GGCACCAACCTAAAGAAAGT+TGG | - | chr7_3:77337501-77337520 | Msa1125870:intron | 45.0% | |
| TTACTTTCATGCTGTCACGG+AGG | + | chr7_3:77337699-77337718 | None:intergenic | 45.0% | |
| CTATTTCCATACCCTGTGGA+GGG | + | chr7_3:77337778-77337797 | None:intergenic | 45.0% | |
| ACTATTTCCATACCCTGTGG+AGG | + | chr7_3:77337779-77337798 | None:intergenic | 45.0% | |
| AAAGAGTGATAGATGGGACC+AGG | - | chr7_3:77337814-77337833 | Msa1125870:CDS | 45.0% | |
| GGAAACCTTTCCGACAGAAT+CGG | + | chr7_3:77337882-77337901 | None:intergenic | 45.0% | |
| GGCATTTGGAAGAACACAGA+AGG | + | chr7_3:77337903-77337922 | None:intergenic | 45.0% | |
| TTCTTCCAAATGCCGGTCAT+TGG | - | chr7_3:77337909-77337928 | Msa1125870:intron | 45.0% | |
| TCTTCCAAATGCCGGTCATT+GGG | - | chr7_3:77337910-77337929 | Msa1125870:intron | 45.0% | |
| GGTTCATGTGGACAATCCAA+AGG | - | chr7_3:77337931-77337950 | Msa1125870:intron | 45.0% | |
| GAACATTGAGCAGATGAGGT+TGG | - | chr7_3:77338063-77338082 | Msa1125870:CDS | 45.0% | |
| !! | AATAAATTTATATAAATAGT+AGG | + | chr7_3:77338099-77338118 | None:intergenic | 5.0% |
| !! | TACTATTTATATAAATTTAT+TGG | - | chr7_3:77338098-77338117 | Msa1125870:CDS | 5.0% |
| CGATTCGCCTTCGTTCAAGA+TGG | - | chr7_3:77334176-77334195 | Msa1125870:three_prime_UTR | 50.0% | |
| ! | ATTACGGCGGTGGAAGTGTA+AGG | + | chr7_3:77334247-77334266 | None:intergenic | 50.0% |
| TGCTGGATCCCAAAAAGCCA+TGG | + | chr7_3:77334273-77334292 | None:intergenic | 50.0% | |
| ACTGGAAGATGGAGAGCGAT+TGG | + | chr7_3:77334338-77334357 | None:intergenic | 50.0% | |
| TGGACATTCCATGGGTGGAA+AGG | - | chr7_3:77334585-77334604 | Msa1125870:intron | 50.0% | |
| AAGAGCAACCTTTCCACCCA+TGG | + | chr7_3:77334596-77334615 | None:intergenic | 50.0% | |
| TTCTGCTCAGTGGCCTAAAC+AGG | - | chr7_3:77334654-77334673 | Msa1125870:intron | 50.0% | |
| GGTCTAAGCTAGCTAGAGTG+AGG | + | chr7_3:77335196-77335215 | None:intergenic | 50.0% | |
| ! | GGCCTCACTCCAGATTTTAG+AGG | + | chr7_3:77335318-77335337 | None:intergenic | 50.0% |
| GAGTGAGGCCCAACTCAAAT+TGG | - | chr7_3:77335328-77335347 | Msa1125870:intron | 50.0% | |
| ! | GTGGATTGAGAGAGGCATGA+CGG | + | chr7_3:77335501-77335520 | None:intergenic | 50.0% |
| ! | TAGCACGTGTGGATTGAGAG+AGG | + | chr7_3:77335509-77335528 | None:intergenic | 50.0% |
| TCTCTCAATCCACACGTGCT+AGG | - | chr7_3:77335508-77335527 | Msa1125870:CDS | 50.0% | |
| GTAGTAGGTCAAGGGTGGTA+AGG | + | chr7_3:77335619-77335638 | None:intergenic | 50.0% | |
| TTGTGGTAGTAGGTCAAGGG+TGG | + | chr7_3:77335624-77335643 | None:intergenic | 50.0% | |
| GGCTTGTGGTAGTAGGTCAA+GGG | + | chr7_3:77335627-77335646 | None:intergenic | 50.0% | |
| ! | TGGCTTGTGGTAGTAGGTCA+AGG | + | chr7_3:77335628-77335647 | None:intergenic | 50.0% |
| GATGACTACAATGCAGCAGC+AGG | - | chr7_3:77335728-77335747 | Msa1125870:intron | 50.0% | |
| GAGAGAGAGACCATCTACTG+AGG | - | chr7_3:77335789-77335808 | Msa1125870:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr7_3:77336511-77336530 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr7_3:77336517-77336536 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr7_3:77336514-77336533 | Msa1125870:intron | 50.0% | |
| !! | TGGGTATTGGATTCTGTCCC+GGG | - | chr7_3:77336719-77336738 | Msa1125870:intron | 50.0% |
| TTCCAATGGTCACTTCTCCC+GGG | + | chr7_3:77336739-77336758 | None:intergenic | 50.0% | |
| !! | AACGGAACATGGAGGCATCA+CGG | + | chr7_3:77337379-77337398 | None:intergenic | 50.0% |
| !!! | CCTCTTTTCAGGTGGCTCTT+GGG | - | chr7_3:77337432-77337451 | Msa1125870:intron | 50.0% |
| TGGCTCTTGGGTCATCTGAT+GGG | - | chr7_3:77337444-77337463 | Msa1125870:intron | 50.0% | |
| TTGGGTCATCTGATGGGACT+TGG | - | chr7_3:77337450-77337469 | Msa1125870:intron | 50.0% | |
| TCTATTGGAGAACCCTCCAC+AGG | - | chr7_3:77337763-77337782 | Msa1125870:CDS | 50.0% | |
| CTATTGGAGAACCCTCCACA+GGG | - | chr7_3:77337764-77337783 | Msa1125870:CDS | 50.0% | |
| ! | AGGAACCGATTCTGTCGGAA+AGG | - | chr7_3:77337874-77337893 | Msa1125870:intron | 50.0% |
| TGAACCCAATGACCGGCATT+TGG | + | chr7_3:77337917-77337936 | None:intergenic | 50.0% | |
| GTCCACATGAACCCAATGAC+CGG | + | chr7_3:77337924-77337943 | None:intergenic | 50.0% | |
| TCCACCGCCGTAATCATCCA+TGG | - | chr7_3:77334253-77334272 | Msa1125870:three_prime_UTR | 55.0% | |
| AGATTGGAGGACGCTGTGTG+TGG | - | chr7_3:77334438-77334457 | Msa1125870:CDS | 55.0% | |
| GGACGCTGTGTGTGGATATG+AGG | - | chr7_3:77334446-77334465 | Msa1125870:CDS | 55.0% | |
| ACTACAATGCAGCAGCAGGG+AGG | - | chr7_3:77335732-77335751 | Msa1125870:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr7_3:77336503-77336522 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr7_3:77336502-77336521 | Msa1125870:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr7_3:77336503-77336522 | Msa1125870:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr7_3:77336509-77336528 | Msa1125870:intron | 55.0% | |
| !!! | GCCTCTTTTCAGGTGGCTCT+TGG | - | chr7_3:77337431-77337450 | Msa1125870:intron | 55.0% |
| CCCAAGAGCCACCTGAAAAG+AGG | + | chr7_3:77337435-77337454 | None:intergenic | 55.0% | |
| GTGGCTCTTGGGTCATCTGA+TGG | - | chr7_3:77337443-77337462 | Msa1125870:intron | 55.0% | |
| GAGTGATAGATGGGACCAGG+AGG | - | chr7_3:77337817-77337836 | Msa1125870:CDS | 55.0% | |
| GGATCCTCTCAATAGCCTCC+TGG | + | chr7_3:77337835-77337854 | None:intergenic | 55.0% | |
| TGCCGGTCATTGGGTTCATG+TGG | - | chr7_3:77337919-77337938 | Msa1125870:intron | 55.0% | |
| GCCATGGATGATTACGGCGG+TGG | + | chr7_3:77334257-77334276 | None:intergenic | 60.0% | |
| GTCCCGGGAGAAGTGACCAT+TGG | - | chr7_3:77336734-77336753 | Msa1125870:intron | 60.0% | |
| GGAGAACCCTCCACAGGGTA+TGG | - | chr7_3:77337769-77337788 | Msa1125870:CDS | 60.0% | |
| GGGACCAGGAGGCTATTGAG+AGG | - | chr7_3:77337828-77337847 | Msa1125870:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 77334073 | 77338244 | 77334073 | ID=Msa1125870;Name=Msa1125870 |
| chr7_3 | mRNA | 77334073 | 77338244 | 77334073 | ID=Msa1125870-mRNA-1;Parent=Msa1125870;Name=Msa1125870-mRNA-1;_AED=0.17;_eAED=0.17;_QI=42|1|1|1|1|1|5|250|326 |
| chr7_3 | exon | 77334073 | 77334572 | 77334073 | ID=Msa1125870-mRNA-1:exon:21345;Parent=Msa1125870-mRNA-1 |
| chr7_3 | exon | 77334734 | 77334874 | 77334734 | ID=Msa1125870-mRNA-1:exon:21344;Parent=Msa1125870-mRNA-1 |
| chr7_3 | exon | 77335489 | 77335601 | 77335489 | ID=Msa1125870-mRNA-1:exon:21343;Parent=Msa1125870-mRNA-1 |
| chr7_3 | exon | 77337642 | 77337877 | 77337642 | ID=Msa1125870-mRNA-1:exon:21342;Parent=Msa1125870-mRNA-1 |
| chr7_3 | exon | 77337962 | 77338244 | 77337962 | ID=Msa1125870-mRNA-1:exon:21341;Parent=Msa1125870-mRNA-1 |
| chr7_3 | five_prime_UTR | 77338203 | 77338244 | 77338203 | ID=Msa1125870-mRNA-1:five_prime_utr;Parent=Msa1125870-mRNA-1 |
| chr7_3 | CDS | 77337962 | 77338202 | 77337962 | ID=Msa1125870-mRNA-1:cds;Parent=Msa1125870-mRNA-1 |
| chr7_3 | CDS | 77337642 | 77337877 | 77337642 | ID=Msa1125870-mRNA-1:cds;Parent=Msa1125870-mRNA-1 |
| chr7_3 | CDS | 77335489 | 77335601 | 77335489 | ID=Msa1125870-mRNA-1:cds;Parent=Msa1125870-mRNA-1 |
| chr7_3 | CDS | 77334734 | 77334874 | 77334734 | ID=Msa1125870-mRNA-1:cds;Parent=Msa1125870-mRNA-1 |
| chr7_3 | CDS | 77334323 | 77334572 | 77334323 | ID=Msa1125870-mRNA-1:cds;Parent=Msa1125870-mRNA-1 |
| chr7_3 | three_prime_UTR | 77334073 | 77334322 | 77334073 | ID=Msa1125870-mRNA-1:three_prime_utr;Parent=Msa1125870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
