AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1081640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1081640 MtrunA17_Chr7g0268501 97.812 320 7 0 1 320 1 320 0.0 650
Msa1081640 MtrunA17_Chr7g0268521 97.812 320 7 0 1 320 1 320 0.0 650
Msa1081640 MtrunA17_Chr4g0024121 52.454 326 149 4 1 320 1 326 8.75e-119 345
Msa1081640 MtrunA17_Chr2g0322861 52.888 329 142 6 1 320 62 386 9.89e-117 342
Msa1081640 MtrunA17_Chr8g0371381 45.928 307 154 5 19 320 20 319 2.94e-94 282
Msa1081640 MtrunA17_Chr5g0405991 47.003 317 150 8 12 320 10 316 9.89e-92 276
Msa1081640 MtrunA17_Chr3g0128061 45.679 324 169 5 2 320 5 326 1.18e-91 276
Msa1081640 MtrunA17_Chr1g0164891 49.667 300 143 5 29 320 93 392 5.51e-90 274
Msa1081640 MtrunA17_Chr1g0157051 44.304 316 168 5 7 319 7 317 1.58e-88 268
Msa1081640 MtrunA17_Chr2g0279041 44.136 324 169 5 5 320 6 325 8.10e-88 266
Msa1081640 MtrunA17_Chr1g0204011 44.268 314 166 6 11 320 14 322 2.05e-87 265
Msa1081640 MtrunA17_Chr7g0258811 43.827 324 174 6 4 320 49 371 1.83e-86 264
Msa1081640 MtrunA17_Chr2g0292211 44.237 321 170 5 6 320 24 341 3.18e-86 263
Msa1081640 MtrunA17_Chr2g0292241 43.987 316 171 4 11 320 15 330 3.80e-86 263
Msa1081640 MtrunA17_Chr4g0070951 42.901 324 172 5 5 320 11 329 9.52e-85 258
Msa1081640 MtrunA17_Chr1g0175561 45.098 306 159 6 23 320 22 326 1.52e-84 258
Msa1081640 MtrunA17_Chr5g0404721 45.338 311 165 4 15 320 20 330 3.57e-84 257
Msa1081640 MtrunA17_Chr2g0291751 42.679 321 178 4 6 320 10 330 9.45e-84 256
Msa1081640 MtrunA17_Chr5g0402581 45.426 317 165 7 11 320 11 326 1.91e-83 255
Msa1081640 MtrunA17_Chr2g0292251 44.625 307 164 4 20 320 23 329 3.62e-83 255
Msa1081640 MtrunA17_Chr2g0292261 43.438 320 175 4 7 320 11 330 9.45e-83 254
Msa1081640 MtrunA17_Chr2g0292271 43.849 317 170 5 12 320 14 330 1.87e-82 253
Msa1081640 MtrunA17_Chr6g0460711 42.902 317 173 5 7 320 3 314 3.82e-82 251
Msa1081640 MtrunA17_Chr1g0194151 41.867 332 181 5 1 320 2 333 2.74e-81 249
Msa1081640 MtrunA17_Chr2g0292181 41.250 320 182 4 7 320 20 339 3.18e-81 250
Msa1081640 MtrunA17_Chr1g0194271 41.003 339 181 5 1 320 2 340 4.93e-81 249
Msa1081640 MtrunA17_Chr4g0063671 39.634 328 180 5 1 320 3 320 1.39e-80 247
Msa1081640 MtrunA17_Chr8g0372601 44.551 312 168 4 14 320 19 330 1.50e-80 248
Msa1081640 MtrunA17_Chr2g0292111 42.500 320 178 4 7 320 11 330 3.04e-80 248
Msa1081640 MtrunA17_Chr5g0402571 43.533 317 171 7 11 320 11 326 3.21e-80 246
Msa1081640 MtrunA17_Chr1g0188431 41.745 321 173 6 3 320 18 327 4.89e-80 246
Msa1081640 MtrunA17_Chr6g0477071 40.373 322 177 9 3 320 32 342 2.89e-79 244
Msa1081640 MtrunA17_Chr2g0320071 41.304 322 176 5 3 320 5 317 8.71e-79 243
Msa1081640 MtrunA17_Chr2g0292151 42.812 320 177 4 7 320 11 330 4.05e-78 242
Msa1081640 MtrunA17_Chr7g0254201 41.472 299 166 5 25 320 20 312 3.44e-77 238
Msa1081640 MtrunA17_Chr7g0225221 41.667 324 178 6 2 320 3 320 4.09e-77 238
Msa1081640 MtrunA17_Chr2g0292091 41.250 320 181 5 8 320 6 325 2.59e-76 237
Msa1081640 MtrunA17_Chr3g0129051 41.534 313 170 5 10 316 13 318 3.26e-76 236
Msa1081640 MtrunA17_Chr4g0068621 44.590 305 160 6 22 320 35 336 5.35e-76 236
Msa1081640 MtrunA17_Chr2g0292101 41.745 321 180 5 7 320 6 326 1.27e-75 235
Msa1081640 MtrunA17_Chr2g0299691 42.547 322 170 7 11 320 40 358 1.77e-75 236
Msa1081640 MtrunA17_Chr1g0148021 45.066 304 157 7 25 320 27 328 3.32e-75 234
Msa1081640 MtrunA17_Chr2g0320101 40.252 318 179 4 7 320 7 317 8.02e-75 233
Msa1081640 MtrunA17_Chr2g0296621 42.905 296 159 5 28 320 53 341 2.33e-74 232
Msa1081640 MtrunA17_Chr1g0213061 40.379 317 174 6 11 320 13 321 2.91e-74 231
Msa1081640 MtrunA17_Chr8g0364291 39.812 319 185 5 8 320 7 324 4.64e-74 231
Msa1081640 MtrunA17_Chr4g0053871 42.508 327 173 8 2 319 3 323 7.92e-74 230
Msa1081640 MtrunA17_Chr4g0046131 41.584 303 168 6 25 318 42 344 8.00e-74 231
Msa1081640 MtrunA17_Chr2g0320091 40.439 319 178 5 7 320 7 318 2.66e-73 229
Msa1081640 MtrunA17_Chr7g0254231 39.867 301 169 5 23 320 20 311 1.19e-72 227
Msa1081640 MtrunA17_Chr3g0114451 39.755 327 181 6 1 320 1 318 1.47e-72 227
Msa1081640 MtrunA17_Chr2g0320061 40.125 319 179 4 7 320 7 318 6.54e-72 225
Msa1081640 MtrunA17_Chr5g0401431 40.673 327 184 7 2 319 3 328 1.46e-71 224
Msa1081640 MtrunA17_Chr2g0320051 40.125 319 179 4 7 320 7 318 2.34e-71 224
Msa1081640 MtrunA17_Chr2g0292291 41.558 308 173 5 20 320 25 332 7.80e-71 223
Msa1081640 MtrunA17_Chr4g0013721 40.000 305 176 5 20 320 95 396 2.03e-70 224
Msa1081640 MtrunA17_Chr4g0072091 42.574 303 164 5 25 320 24 323 4.75e-70 220
Msa1081640 MtrunA17_Chr2g0279061 45.946 259 129 4 69 320 12 266 1.21e-69 218
Msa1081640 MtrunA17_Chr4g0076211 42.373 295 159 6 30 320 46 333 5.83e-69 218
Msa1081640 MtrunA17_Chr2g0320031 39.506 324 181 7 3 320 5 319 1.02e-68 217
Msa1081640 MtrunA17_Chr4g0043391 40.132 304 168 5 25 320 27 324 1.06e-68 217
Msa1081640 MtrunA17_Chr5g0400331 42.484 306 166 5 25 320 26 331 1.44e-68 217
Msa1081640 MtrunA17_Chr5g0438021 38.650 326 186 6 1 320 8 325 1.68e-68 216
Msa1081640 MtrunA17_Chr5g0432331 42.484 306 157 8 25 320 56 352 4.68e-68 216
Msa1081640 MtrunA17_Chr7g0244461 38.658 313 180 5 12 320 8 312 4.93e-68 215
Msa1081640 MtrunA17_Chr5g0432441 38.154 325 180 8 10 320 9 326 4.08e-67 213
Msa1081640 MtrunA17_Chr1g0155611 41.722 302 170 4 25 320 46 347 1.43e-66 212
Msa1081640 MtrunA17_Chr3g0129061 39.617 313 176 5 10 316 13 318 1.59e-66 211
Msa1081640 MtrunA17_Chr5g0432351 39.697 330 180 9 1 320 1 321 3.00e-66 211
Msa1081640 MtrunA17_Chr1g0197411 37.963 324 188 7 5 320 12 330 3.53e-66 211
Msa1081640 MtrunA17_Chr4g0038171 39.739 307 165 5 25 320 24 321 5.58e-66 210
Msa1081640 MtrunA17_Chr4g0038161 37.994 329 184 6 3 320 1 320 8.25e-66 209
Msa1081640 MtrunA17_Chr7g0244451 37.037 324 192 5 1 320 1 316 1.10e-65 209
Msa1081640 MtrunA17_Chr5g0432341 41.883 308 156 10 25 320 25 321 1.18e-65 209
Msa1081640 MtrunA17_Chr2g0329641 38.816 304 174 5 25 320 36 335 1.57e-65 209
Msa1081640 MtrunA17_Chr4g0038151 37.576 330 185 7 3 320 1 321 1.59e-65 209
Msa1081640 MtrunA17_Chr4g0013821 37.667 300 180 5 25 320 28 324 1.64e-65 209
Msa1081640 MtrunA17_Chr7g0224371 37.730 326 187 6 1 320 7 322 4.02e-65 207
Msa1081640 MtrunA17_Chr4g0013171 36.957 322 190 6 5 320 7 321 4.28e-65 207
Msa1081640 MtrunA17_Chr3g0129041 40.625 320 173 6 7 320 14 322 1.50e-64 206
Msa1081640 MtrunA17_Chr4g0013181 38.796 299 170 6 28 320 62 353 3.05e-64 206
Msa1081640 MtrunA17_Chr3g0106901 38.438 320 183 5 5 320 14 323 4.35e-64 205
Msa1081640 MtrunA17_Chr3g0106921 36.562 320 188 7 8 320 9 320 5.51e-64 205
Msa1081640 MtrunA17_Chr3g0107881 38.769 325 181 8 5 320 9 324 5.67e-64 205
Msa1081640 MtrunA17_Chr3g0136751 40.308 325 181 6 2 320 5 322 7.34e-64 204
Msa1081640 MtrunA17_Chr2g0316481 36.119 335 177 6 19 317 70 403 7.42e-64 207
Msa1081640 MtrunA17_Chr4g0013191 39.274 303 170 6 25 320 45 340 5.74e-63 202
Msa1081640 MtrunA17_Chr4g0013201 38.333 300 174 4 25 320 46 338 7.14e-63 202
Msa1081640 MtrunA17_Chr2g0316791 35.928 334 179 5 19 317 70 403 7.88e-63 204
Msa1081640 MtrunA17_Chr2g0316831 36.119 335 177 6 19 317 106 439 8.96e-63 205
Msa1081640 MtrunA17_Chr2g0316191 35.224 335 181 5 19 317 70 404 7.22e-62 202
Msa1081640 MtrunA17_Chr2g0278671 39.672 305 170 6 25 320 24 323 1.45e-61 199
Msa1081640 MtrunA17_Chr6g0467161 36.086 327 188 8 6 320 19 336 5.72e-61 197
Msa1081640 MtrunA17_Chr6g0467251 36.111 324 189 9 6 320 14 328 6.32e-61 197
Msa1081640 MtrunA17_Chr6g0467121 36.970 330 182 10 5 320 46 363 3.84e-60 197
Msa1081640 MtrunA17_Chr2g0311251 36.012 336 179 7 19 319 5 339 4.80e-60 195
Msa1081640 MtrunA17_Chr2g0311241 33.422 377 174 7 19 319 54 429 7.67e-60 197
Msa1081640 MtrunA17_Chr6g0451571 38.272 324 186 9 5 320 17 334 2.08e-59 193
Msa1081640 MtrunA17_Chr5g0413051 35.897 312 185 8 21 320 69 377 2.46e-58 192
Msa1081640 MtrunA17_Chr4g0075241 34.967 306 190 6 21 320 25 327 8.27e-55 181
Msa1081640 MtrunA17_Chr4g0074851 35.802 324 185 8 5 320 20 328 2.53e-54 180
Msa1081640 MtrunA17_Chr1g0181511 35.430 302 184 4 25 320 27 323 2.13e-53 177
Msa1081640 MtrunA17_Chr5g0421411 37.063 286 161 10 49 320 5 285 3.05e-53 176
Msa1081640 MtrunA17_Chr1g0181431 34.824 313 182 8 18 320 23 323 5.30e-53 176
Msa1081640 MtrunA17_Chr7g0268491 92.941 85 6 0 236 320 13 97 3.12e-50 162
Msa1081640 MtrunA17_Chr1g0181481 33.987 306 183 7 25 320 27 323 3.79e-50 169
Msa1081640 MtrunA17_Chr4g0004591 32.177 317 155 4 25 319 77 355 1.62e-46 160
Msa1081640 MtrunA17_Chr2g0316811 38.428 229 122 3 19 228 44 272 2.16e-45 157
Msa1081640 MtrunA17_Chr5g0432401 32.722 327 160 8 4 319 8 285 1.54e-43 150
Msa1081640 MtrunA17_Chr2g0292281 41.905 210 107 5 116 320 17 216 8.07e-40 140
Msa1081640 MtrunA17_Chr2g0316141 32.155 283 138 6 71 317 11 275 1.08e-37 135
Msa1081640 MtrunA17_Chr2g0316181 32.155 283 138 6 71 317 11 275 1.08e-37 135
Msa1081640 MtrunA17_Chr3g0114461 36.898 187 109 3 136 320 13 192 1.96e-32 119
Msa1081640 MtrunA17_Chr3g0114491 49.533 107 53 1 25 130 18 124 1.18e-28 107
Msa1081640 MtrunA17_Chr1g0196191 59.756 82 30 1 67 148 27 105 6.89e-25 98.2
Msa1081640 MtrunA17_Chr6g0468731 64.179 67 21 1 64 130 22 85 3.29e-23 91.7
Msa1081640 MtrunA17_Chr1g0181491 37.838 111 68 1 19 129 6 115 5.74e-21 87.4
Msa1081640 MtrunA17_Chr1g0181501 29.947 187 121 4 138 320 9 189 5.01e-18 80.9
Msa1081640 MtrunA17_Chr7g0254181 37.589 141 75 4 77 207 12 149 5.35e-18 79.7
Msa1081640 MtrunA17_Chr5g0432321 35.484 124 72 2 143 266 17 132 7.52e-16 73.2
Msa1081640 MtrunA17_Chr2g0316771 24.444 180 103 4 170 317 5 183 2.38e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1081640 AT1G05260.1 56.478 301 125 4 25 320 26 325 6.34e-119 345
Msa1081640 AT4G11290.1 53.823 327 141 6 3 320 1 326 1.08e-116 340
Msa1081640 AT1G05240.1 50.836 299 139 4 28 320 29 325 8.02e-108 317
Msa1081640 AT1G05250.1 50.836 299 139 4 28 320 29 325 8.02e-108 317
Msa1081640 AT2G39040.1 51.466 307 140 4 23 320 44 350 2.20e-107 317
Msa1081640 AT3G21770.1 51.803 305 141 4 20 319 24 327 6.95e-107 315
Msa1081640 AT3G01190.1 50.156 321 152 5 4 320 5 321 2.82e-105 311
Msa1081640 AT5G15180.1 50.000 316 149 5 12 320 16 329 1.78e-104 309
Msa1081640 AT5G42180.1 43.750 320 173 4 3 319 1 316 1.10e-90 273
Msa1081640 AT5G64120.1 45.638 298 154 5 26 320 36 328 1.05e-86 263
Msa1081640 AT5G17820.1 41.433 321 176 5 3 320 2 313 1.84e-84 257
Msa1081640 AT5G51890.1 44.514 319 160 8 12 320 11 322 8.05e-84 256
Msa1081640 AT5G17820.2 41.433 321 176 5 3 320 55 366 3.37e-83 256
Msa1081640 AT2G24800.1 48.515 303 145 6 25 320 31 329 4.57e-83 254
Msa1081640 AT5G06720.1 42.236 322 180 4 5 320 12 333 5.32e-83 254
Msa1081640 AT2G41480.1 41.104 326 179 5 4 320 7 328 1.64e-82 253
Msa1081640 AT5G66390.1 44.164 317 170 5 10 320 18 333 3.11e-82 252
Msa1081640 AT2G18150.1 43.234 303 167 4 23 320 34 336 6.19e-82 252
Msa1081640 AT5G06730.1 42.857 322 178 4 5 320 13 334 1.32e-81 251
Msa1081640 AT4G36430.1 41.667 312 177 4 14 320 19 330 4.87e-81 249
Msa1081640 AT4G31760.1 44.304 316 166 5 11 320 15 326 5.53e-81 249
Msa1081640 AT3G03670.1 39.815 324 188 4 1 320 1 321 6.71e-81 248
Msa1081640 AT2G18140.1 42.020 307 170 5 22 320 29 335 1.16e-80 248
Msa1081640 AT5G64100.1 43.144 299 157 5 28 320 40 331 9.68e-80 246
Msa1081640 AT4G33420.1 43.478 299 156 5 25 320 37 325 2.05e-79 245
Msa1081640 AT5G39580.1 40.373 322 182 7 3 320 4 319 2.33e-79 244
Msa1081640 AT5G19890.1 41.718 326 176 6 3 320 8 327 2.47e-79 244
Msa1081640 AT4G33420.2 43.478 299 156 5 25 320 84 372 1.14e-78 244
Msa1081640 AT2G38380.1 42.547 322 176 6 8 320 12 333 1.84e-78 243
Msa1081640 AT4G37530.1 44.079 304 161 6 25 320 27 329 3.50e-78 242
Msa1081640 AT2G38390.1 41.925 322 178 6 8 320 12 333 3.68e-78 242
Msa1081640 AT5G14130.1 43.519 324 171 9 3 320 13 330 1.75e-77 240
Msa1081640 AT4G37520.1 44.079 304 161 6 25 320 27 329 2.05e-77 240
Msa1081640 AT5G14130.2 43.519 324 171 9 3 320 54 371 4.97e-77 240
Msa1081640 AT4G37520.2 44.040 302 161 6 25 320 27 326 1.33e-76 238
Msa1081640 AT5G19880.1 41.066 319 179 6 11 320 11 329 4.82e-76 236
Msa1081640 AT1G71695.1 43.564 303 157 8 25 320 44 339 1.15e-75 236
Msa1081640 AT2G18980.1 42.724 323 172 6 5 320 7 323 1.24e-75 235
Msa1081640 AT5G67400.1 43.137 306 165 6 23 320 25 329 2.50e-75 234
Msa1081640 AT3G32980.1 41.433 321 176 6 11 320 15 334 3.10e-75 235
Msa1081640 AT3G49960.1 42.105 323 178 6 6 320 8 329 3.89e-75 234
Msa1081640 AT4G26010.1 39.308 318 177 6 7 320 4 309 1.35e-74 232
Msa1081640 AT4G26010.2 39.308 318 177 6 7 320 32 337 3.64e-74 232
Msa1081640 AT1G44970.1 44.013 309 163 5 22 320 38 346 4.81e-74 232
Msa1081640 AT3G50990.1 41.830 306 173 3 20 320 36 341 6.76e-74 231
Msa1081640 AT4G08770.1 40.850 306 173 5 23 320 22 327 1.27e-73 231
Msa1081640 AT4G30170.1 42.244 303 164 5 25 320 27 325 2.91e-73 229
Msa1081640 AT5G64110.1 41.196 301 166 4 26 320 35 330 7.76e-73 228
Msa1081640 AT1G14550.1 40.789 304 164 6 25 320 26 321 3.53e-71 224
Msa1081640 AT5G22410.1 37.855 317 184 6 7 316 11 321 3.66e-71 224
Msa1081640 AT1G49570.1 42.333 300 166 5 24 316 47 346 3.83e-71 224
Msa1081640 AT4G25980.1 39.564 321 182 6 8 320 10 326 1.53e-70 222
Msa1081640 AT1G77100.1 39.744 312 171 7 17 320 17 319 1.38e-69 219
Msa1081640 AT3G49110.1 39.542 306 177 4 23 320 31 336 1.95e-69 220
Msa1081640 AT3G49120.1 39.610 308 178 4 21 320 28 335 2.18e-69 220
Msa1081640 AT4G08780.1 39.803 304 175 4 25 320 24 327 2.39e-69 219
Msa1081640 AT2G35380.1 42.395 309 168 4 22 320 27 335 3.11e-69 219
Msa1081640 AT4G33870.1 36.522 345 178 6 14 317 54 398 8.17e-68 218
Msa1081640 AT2G22420.1 38.944 303 178 5 22 320 20 319 1.68e-67 214
Msa1081640 AT1G14540.1 37.846 325 187 5 1 320 1 315 7.17e-67 212
Msa1081640 AT4G37530.2 45.312 256 132 5 23 271 25 279 8.36e-67 211
Msa1081640 AT5G05340.1 38.742 302 172 5 25 320 30 324 9.21e-67 212
Msa1081640 AT3G28200.1 40.397 302 168 5 25 320 21 316 2.39e-66 211
Msa1081640 AT1G34510.1 37.107 318 184 6 7 320 4 309 2.57e-66 211
Msa1081640 AT4G17690.1 39.474 304 171 6 24 320 25 322 2.87e-66 211
Msa1081640 AT4G16270.1 40.067 297 171 5 29 320 54 348 9.06e-65 208
Msa1081640 AT5G40150.1 39.172 314 178 6 14 320 21 328 1.21e-63 204
Msa1081640 AT1G68850.1 38.095 336 180 11 5 320 8 335 4.12e-63 203
Msa1081640 AT2G34060.1 39.274 303 175 6 25 318 42 344 2.02e-62 202
Msa1081640 AT5G24070.1 36.741 313 183 6 18 320 28 335 5.06e-62 201
Msa1081640 AT5G47000.1 37.086 302 180 5 25 320 33 330 5.66e-62 200
Msa1081640 AT1G30870.1 38.206 301 169 7 28 320 54 345 9.32e-62 200
Msa1081640 AT5G58390.1 38.006 321 184 7 7 320 4 316 2.75e-60 195
Msa1081640 AT2G43480.1 36.392 316 183 7 18 320 25 335 7.23e-60 195
Msa1081640 AT5G58400.1 36.943 314 182 7 11 316 16 321 1.09e-59 194
Msa1081640 AT1G24110.1 37.908 306 179 6 23 320 20 322 4.10e-57 187
Msa1081640 AT4G21960.1 35.583 326 194 6 6 320 7 327 1.41e-55 184
Msa1081640 AT3G17070.1 33.841 328 200 9 6 320 16 339 1.17e-51 174
Msa1081640 AT2G37130.1 34.304 309 183 7 23 320 28 327 2.84e-51 172
Msa1081640 AT2G37130.2 34.211 304 180 7 28 320 2 296 2.50e-50 169
Msa1081640 AT2G35380.2 39.184 245 139 4 86 320 3 247 1.52e-44 152
Msa1081640 AT5G39580.2 41.053 190 105 4 3 190 4 188 6.10e-44 150
Msa1081640 AT2G24800.2 50.303 165 77 2 25 187 31 192 2.13e-42 147
Msa1081640 AT4G25980.2 44.444 180 94 4 12 189 59 234 5.66e-42 147
Msa1081640 AT3G17070.2 32.955 264 162 9 67 320 18 276 1.11e-34 127

Find 65 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATGTTGTTGAGCTATT+TGG 0.173041 7_2:+81468881 None:intergenic
CATGACTTGGTTGTATTATC+AGG 0.207951 7_2:-81469280 Msa1081640:intron
AAGCCTGCTAATGATAAATT+AGG 0.273981 7_2:+81469635 None:intergenic
GATTAGGGCTTCAATGCTTC+TGG 0.289264 7_2:+81469372 None:intergenic
GTCACTTAGGCCTTGGCATT+TGG 0.297824 7_2:+81468928 None:intergenic
TAGAAACATTGTTAATGAAT+TGG 0.309617 7_2:-81468780 Msa1081640:CDS
TTCAAGAAATTTGCATAAGT+TGG 0.318870 7_2:+81468953 None:intergenic
ATCAACTTGGCTGGCAGCTC+AGG 0.326426 7_2:+81469927 None:intergenic
GTCTGAGCTGTGTGATGTTA+TGG 0.364222 7_2:+81469332 None:intergenic
AGAAGACATAAAAGAAGCTT+TGG 0.382183 7_2:-81469603 Msa1081640:CDS
AAGGTGCTGGAATATTGATT+AGG 0.388624 7_2:+81469356 None:intergenic
AACAATGTTTCTAGATTGCT+TGG 0.397011 7_2:+81468790 None:intergenic
AGGTGCTGGAATATTGATTA+GGG 0.399370 7_2:+81469357 None:intergenic
CCCTACAACATGTCTCTTCA+AGG 0.409923 7_2:-81469950 Msa1081640:CDS
AGCAACGTGGGAAGTGCTTA+CGG 0.416975 7_2:-81469416 Msa1081640:CDS
TTTATAGGAGCACACACAAT+TGG 0.421672 7_2:-81469052 Msa1081640:intron
TCAGCACATGATACAATTCC+AGG 0.427154 7_2:+81469569 None:intergenic
ATTGCAACTTATTCAGCAAC+AGG 0.429672 7_2:-81469021 Msa1081640:CDS
ATTCCTAATTTATCATTAGC+AGG 0.434054 7_2:-81469638 Msa1081640:CDS
GTTCGAATGGAGAAATTAGA+AGG 0.434571 7_2:-81468685 Msa1081640:CDS
TCTTATAGAAATTCTTCCTC+AGG 0.441182 7_2:+81470012 None:intergenic
TGGTGGTGTCACTTAGGCCT+TGG 0.470093 7_2:+81468921 None:intergenic
GCAACGTGGGAAGTGCTTAC+GGG 0.476545 7_2:-81469415 Msa1081640:CDS
TGCTGGTAACACGGCGGAGA+AGG 0.481785 7_2:-81469666 Msa1081640:CDS
TGTTTCCTTGGGATTAGTGA+AGG 0.483976 7_2:-81470041 Msa1081640:CDS
AGACATAAAAGAAGCTTTGG+AGG 0.490687 7_2:-81469600 Msa1081640:CDS
AAAGCTTACTCTTCATGACT+TGG 0.493798 7_2:-81469293 Msa1081640:CDS
CTGTTGTGGTGGTGTCACTT+AGG 0.496811 7_2:+81468915 None:intergenic
GAAGAGGATGGGAGCTATTG+AGG 0.498561 7_2:-81468717 Msa1081640:CDS
TGCAGTCTTATCAACTTGGC+TGG 0.499023 7_2:+81469918 None:intergenic
GCTTTGGAGGAGAAATGTCC+TGG 0.501858 7_2:-81469587 Msa1081640:CDS
TTCTCAGTCAATGAAGAGGA+TGG 0.515611 7_2:-81468729 Msa1081640:CDS
GCATAAGTTGGATTCAGAGA+TGG 0.521194 7_2:+81468965 None:intergenic
GGAGCTATTGAGGTCCTCAC+TGG 0.526293 7_2:-81468707 Msa1081640:CDS
ATTTCAGGGGTGTGACGCAT+CGG 0.528033 7_2:-81469705 Msa1081640:intron
TCCTGTCCTTCTACAAAACA+AGG 0.528441 7_2:-81468846 Msa1081640:CDS
TGGATCCATCTCTACTGTTG+TGG 0.535692 7_2:+81468901 None:intergenic
TTAACAATCTCCTCGGCTTG+AGG 0.538035 7_2:+81469981 None:intergenic
CACCACCACAACAGTAGAGA+TGG 0.539448 7_2:-81468906 Msa1081640:CDS
CTCCGCCGTGTTACCAGCAG+TGG 0.544816 7_2:+81469670 None:intergenic
AAAATGCAGTCTTATCAACT+TGG 0.547582 7_2:+81469914 None:intergenic
CCTTGAAGAGACATGTTGTA+GGG 0.548319 7_2:+81469950 None:intergenic
GCCTTGAAGAGACATGTTGT+AGG 0.550855 7_2:+81469949 None:intergenic
TATGTTCTTAACAATCTCCT+CGG 0.551942 7_2:+81469974 None:intergenic
ATCCATCTCTACTGTTGTGG+TGG 0.572153 7_2:+81468904 None:intergenic
GAGGTCCTCACTGGTTCGAA+TGG 0.575650 7_2:-81468698 Msa1081640:CDS
TCTCAGTCAATGAAGAGGAT+GGG 0.577113 7_2:-81468728 Msa1081640:CDS
TGCTAATGATAAATTAGGAA+TGG 0.579765 7_2:+81469640 None:intergenic
GTGCTTACGGGTAGAAGAGA+TGG 0.590073 7_2:-81469403 Msa1081640:CDS
GTGATGTTATGGAAAGGTGC+TGG 0.590837 7_2:+81469343 None:intergenic
TTCTTGAAGACCAAATGCCA+AGG 0.601738 7_2:-81468938 Msa1081640:CDS
GGAGTCCACTGCTGGTAACA+CGG 0.604044 7_2:-81469675 Msa1081640:CDS
AAATCATCATAGAAGCTACA+AGG 0.606420 7_2:+81470066 None:intergenic
TGCCTCCTTCACTAATCCCA+AGG 0.608920 7_2:+81470036 None:intergenic
TTCCTTGGGATTAGTGAAGG+AGG 0.628514 7_2:-81470038 Msa1081640:CDS
GTTTAATGATAAAGCAACGT+GGG 0.643577 7_2:-81469428 Msa1081640:CDS
GGAGCACACACAATTGGAGT+AGG 0.649757 7_2:-81469046 Msa1081640:CDS
TTAGTGAAGGAGGCAGCCTG+AGG 0.650005 7_2:-81470028 Msa1081640:CDS
GAAGTCATGTCCTCAAGCCG+AGG 0.660015 7_2:-81469991 Msa1081640:CDS
ATGTGCTGATATACTCACAT+TGG 0.669867 7_2:-81469555 Msa1081640:CDS
CCTGTCCTTCTACAAAACAA+GGG 0.678901 7_2:-81468845 Msa1081640:CDS
AGCTGTGTGATGTTATGGAA+AGG 0.689638 7_2:+81469337 None:intergenic
TTTCTCCATTCGAACCAGTG+AGG 0.691397 7_2:+81468693 None:intergenic
GTCCACTGCTGGTAACACGG+CGG 0.772361 7_2:-81469672 Msa1081640:CDS
AGTTTAATGATAAAGCAACG+TGG 0.776571 7_2:-81469429 Msa1081640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATGAATGAATAAATC+AGG + chr7_2:81469292-81469311 None:intergenic 15.0%
!! AAAATATGAATGAATAAATC+AGG + chr7_2:81469292-81469311 None:intergenic 15.0%
!! TGGGAATATGTATAAATTAA+TGG + chr7_2:81469257-81469276 None:intergenic 20.0%
!! ACTTAAATTATTACATGTGT+TGG + chr7_2:81469609-81469628 None:intergenic 20.0%
!! ACATGTAATAATTTAAGTCA+CGG - chr7_2:81469611-81469630 Msa1081640:CDS 20.0%
!! TACTAGTTAAATTAACATGT+TGG - chr7_2:81469663-81469682 Msa1081640:CDS 20.0%
!! TAGAAACATTGTTAATGAAT+TGG - chr7_2:81469967-81469986 Msa1081640:CDS 20.0%
!! TGGGAATATGTATAAATTAA+TGG + chr7_2:81469257-81469276 None:intergenic 20.0%
!! ACTTAAATTATTACATGTGT+TGG + chr7_2:81469609-81469628 None:intergenic 20.0%
!! ACATGTAATAATTTAAGTCA+CGG - chr7_2:81469611-81469630 Msa1081640:CDS 20.0%
!! TACTAGTTAAATTAACATGT+TGG - chr7_2:81469663-81469682 Msa1081640:CDS 20.0%
!! TAGAAACATTGTTAATGAAT+TGG - chr7_2:81469967-81469986 Msa1081640:CDS 20.0%
!!! ATTTTCATGACTGTTTTGTT+AGG - chr7_2:81468851-81468870 Msa1081640:CDS 25.0%
!!! TTTTCATGACTGTTTTGTTA+GGG - chr7_2:81468852-81468871 Msa1081640:CDS 25.0%
! CTAAAATTGTAAAGATCAAG+GGG + chr7_2:81468884-81468903 None:intergenic 25.0%
! GCTAAAATTGTAAAGATCAA+GGG + chr7_2:81468885-81468904 None:intergenic 25.0%
! AGCTAAAATTGTAAAGATCA+AGG + chr7_2:81468886-81468905 None:intergenic 25.0%
! CACAATATAACTTATCTTGT+GGG + chr7_2:81468964-81468983 None:intergenic 25.0%
! TGCTAATGATAAATTAGGAA+TGG + chr7_2:81469110-81469129 None:intergenic 25.0%
! ATTCCTAATTTATCATTAGC+AGG - chr7_2:81469109-81469128 Msa1081640:intron 25.0%
! CATGTTAATTTAACTAGTAC+TGG + chr7_2:81469662-81469681 None:intergenic 25.0%
!! TGTTGGCTATATGTATTTAT+AGG - chr7_2:81469680-81469699 Msa1081640:CDS 25.0%
! TTCAAGAAATTTGCATAAGT+TGG + chr7_2:81469797-81469816 None:intergenic 25.0%
!!! ATTTTCATGACTGTTTTGTT+AGG - chr7_2:81468851-81468870 Msa1081640:CDS 25.0%
!!! TTTTCATGACTGTTTTGTTA+GGG - chr7_2:81468852-81468871 Msa1081640:CDS 25.0%
! CTAAAATTGTAAAGATCAAG+GGG + chr7_2:81468884-81468903 None:intergenic 25.0%
! GCTAAAATTGTAAAGATCAA+GGG + chr7_2:81468885-81468904 None:intergenic 25.0%
! AGCTAAAATTGTAAAGATCA+AGG + chr7_2:81468886-81468905 None:intergenic 25.0%
! CACAATATAACTTATCTTGT+GGG + chr7_2:81468964-81468983 None:intergenic 25.0%
! TGCTAATGATAAATTAGGAA+TGG + chr7_2:81469110-81469129 None:intergenic 25.0%
! ATTCCTAATTTATCATTAGC+AGG - chr7_2:81469109-81469128 Msa1081640:intron 25.0%
! CATGTTAATTTAACTAGTAC+TGG + chr7_2:81469662-81469681 None:intergenic 25.0%
!! TGTTGGCTATATGTATTTAT+AGG - chr7_2:81469680-81469699 Msa1081640:CDS 25.0%
! TTCAAGAAATTTGCATAAGT+TGG + chr7_2:81469797-81469816 None:intergenic 25.0%
AAATCATCATAGAAGCTACA+AGG + chr7_2:81468684-81468703 None:intergenic 30.0%
! ATGATGATTTTCTGTTTCCT+TGG - chr7_2:81468694-81468713 Msa1081640:CDS 30.0%
! TGATGATTTTCTGTTTCCTT+GGG - chr7_2:81468695-81468714 Msa1081640:CDS 30.0%
TCTTATAGAAATTCTTCCTC+AGG + chr7_2:81468738-81468757 None:intergenic 30.0%
TATGTTCTTAACAATCTCCT+CGG + chr7_2:81468776-81468795 None:intergenic 30.0%
! AAAATGCAGTCTTATCAACT+TGG + chr7_2:81468836-81468855 None:intergenic 30.0%
ATATAACTTATCTTGTGGGA+CGG + chr7_2:81468960-81468979 None:intergenic 30.0%
CCACAATATAACTTATCTTG+TGG + chr7_2:81468965-81468984 None:intergenic 30.0%
CCACAAGATAAGTTATATTG+TGG - chr7_2:81468962-81468981 Msa1081640:CDS 30.0%
CAAGATAAGTTATATTGTGG+TGG - chr7_2:81468965-81468984 Msa1081640:CDS 30.0%
AAGCCTGCTAATGATAAATT+AGG + chr7_2:81469115-81469134 None:intergenic 30.0%
AGAAGACATAAAAGAAGCTT+TGG - chr7_2:81469144-81469163 Msa1081640:intron 30.0%
AGTTTAATGATAAAGCAACG+TGG - chr7_2:81469318-81469337 Msa1081640:CDS 30.0%
GTTTAATGATAAAGCAACGT+GGG - chr7_2:81469319-81469338 Msa1081640:CDS 30.0%
AATAATTTAAGTCACGGACA+CGG - chr7_2:81469617-81469636 Msa1081640:CDS 30.0%
TCAAATGTTGTTGAGCTATT+TGG + chr7_2:81469869-81469888 None:intergenic 30.0%
!! AACAATGTTTCTAGATTGCT+TGG + chr7_2:81469960-81469979 None:intergenic 30.0%
AAATCATCATAGAAGCTACA+AGG + chr7_2:81468684-81468703 None:intergenic 30.0%
! ATGATGATTTTCTGTTTCCT+TGG - chr7_2:81468694-81468713 Msa1081640:CDS 30.0%
! TGATGATTTTCTGTTTCCTT+GGG - chr7_2:81468695-81468714 Msa1081640:CDS 30.0%
TCTTATAGAAATTCTTCCTC+AGG + chr7_2:81468738-81468757 None:intergenic 30.0%
TATGTTCTTAACAATCTCCT+CGG + chr7_2:81468776-81468795 None:intergenic 30.0%
! AAAATGCAGTCTTATCAACT+TGG + chr7_2:81468836-81468855 None:intergenic 30.0%
ATATAACTTATCTTGTGGGA+CGG + chr7_2:81468960-81468979 None:intergenic 30.0%
CCACAATATAACTTATCTTG+TGG + chr7_2:81468965-81468984 None:intergenic 30.0%
CCACAAGATAAGTTATATTG+TGG - chr7_2:81468962-81468981 Msa1081640:CDS 30.0%
CAAGATAAGTTATATTGTGG+TGG - chr7_2:81468965-81468984 Msa1081640:CDS 30.0%
AAGCCTGCTAATGATAAATT+AGG + chr7_2:81469115-81469134 None:intergenic 30.0%
AGAAGACATAAAAGAAGCTT+TGG - chr7_2:81469144-81469163 Msa1081640:intron 30.0%
AGTTTAATGATAAAGCAACG+TGG - chr7_2:81469318-81469337 Msa1081640:CDS 30.0%
GTTTAATGATAAAGCAACGT+GGG - chr7_2:81469319-81469338 Msa1081640:CDS 30.0%
AATAATTTAAGTCACGGACA+CGG - chr7_2:81469617-81469636 Msa1081640:CDS 30.0%
TCAAATGTTGTTGAGCTATT+TGG + chr7_2:81469869-81469888 None:intergenic 30.0%
!! AACAATGTTTCTAGATTGCT+TGG + chr7_2:81469960-81469979 None:intergenic 30.0%
CTAAGTGACATGCATATCTA+CGG - chr7_2:81469015-81469034 Msa1081640:CDS 35.0%
ATATCTACGGTTGCATTTCA+GGG - chr7_2:81469028-81469047 Msa1081640:CDS 35.0%
! AGACATAAAAGAAGCTTTGG+AGG - chr7_2:81469147-81469166 Msa1081640:intron 35.0%
! ATGTGCTGATATACTCACAT+TGG - chr7_2:81469192-81469211 Msa1081640:intron 35.0%
!! AGGTGCTGGAATATTGATTA+GGG + chr7_2:81469393-81469412 None:intergenic 35.0%
!! AAGGTGCTGGAATATTGATT+AGG + chr7_2:81469394-81469413 None:intergenic 35.0%
AAAGCTTACTCTTCATGACT+TGG - chr7_2:81469454-81469473 Msa1081640:intron 35.0%
!! CATGACTTGGTTGTATTATC+AGG - chr7_2:81469467-81469486 Msa1081640:intron 35.0%
TCTGTGTCTTGAAATGTGAT+TGG + chr7_2:81469566-81469585 None:intergenic 35.0%
ACATTTCAAGACACAGACAT+CGG - chr7_2:81469569-81469588 Msa1081640:CDS 35.0%
! TTTATAGGAGCACACACAAT+TGG - chr7_2:81469695-81469714 Msa1081640:CDS 35.0%
ATTGCAACTTATTCAGCAAC+AGG - chr7_2:81469726-81469745 Msa1081640:intron 35.0%
! CTTTTCAACTTCACTGGAAA+AGG - chr7_2:81469749-81469768 Msa1081640:intron 35.0%
! AGTTTTCTCAGTCAATGAAG+AGG - chr7_2:81470014-81470033 Msa1081640:CDS 35.0%
GTTCGAATGGAGAAATTAGA+AGG - chr7_2:81470062-81470081 Msa1081640:CDS 35.0%
CTAAGTGACATGCATATCTA+CGG - chr7_2:81469015-81469034 Msa1081640:CDS 35.0%
ATATCTACGGTTGCATTTCA+GGG - chr7_2:81469028-81469047 Msa1081640:CDS 35.0%
! AGACATAAAAGAAGCTTTGG+AGG - chr7_2:81469147-81469166 Msa1081640:intron 35.0%
! ATGTGCTGATATACTCACAT+TGG - chr7_2:81469192-81469211 Msa1081640:intron 35.0%
!! AGGTGCTGGAATATTGATTA+GGG + chr7_2:81469393-81469412 None:intergenic 35.0%
!! AAGGTGCTGGAATATTGATT+AGG + chr7_2:81469394-81469413 None:intergenic 35.0%
AAAGCTTACTCTTCATGACT+TGG - chr7_2:81469454-81469473 Msa1081640:intron 35.0%
!! CATGACTTGGTTGTATTATC+AGG - chr7_2:81469467-81469486 Msa1081640:intron 35.0%
TCTGTGTCTTGAAATGTGAT+TGG + chr7_2:81469566-81469585 None:intergenic 35.0%
ACATTTCAAGACACAGACAT+CGG - chr7_2:81469569-81469588 Msa1081640:CDS 35.0%
! TTTATAGGAGCACACACAAT+TGG - chr7_2:81469695-81469714 Msa1081640:CDS 35.0%
ATTGCAACTTATTCAGCAAC+AGG - chr7_2:81469726-81469745 Msa1081640:intron 35.0%
! CTTTTCAACTTCACTGGAAA+AGG - chr7_2:81469749-81469768 Msa1081640:intron 35.0%
! AGTTTTCTCAGTCAATGAAG+AGG - chr7_2:81470014-81470033 Msa1081640:CDS 35.0%
GTTCGAATGGAGAAATTAGA+AGG - chr7_2:81470062-81470081 Msa1081640:CDS 35.0%
! TGTTTCCTTGGGATTAGTGA+AGG - chr7_2:81468706-81468725 Msa1081640:CDS 40.0%
CCTTGAAGAGACATGTTGTA+GGG + chr7_2:81468800-81468819 None:intergenic 40.0%
CATATCTACGGTTGCATTTC+AGG - chr7_2:81469027-81469046 Msa1081640:CDS 40.0%
TATCTACGGTTGCATTTCAG+GGG - chr7_2:81469029-81469048 Msa1081640:CDS 40.0%
TCAGCACATGATACAATTCC+AGG + chr7_2:81469181-81469200 None:intergenic 40.0%
AATCAGGATGCTTCATGCAT+GGG + chr7_2:81469276-81469295 None:intergenic 40.0%
AAATCAGGATGCTTCATGCA+TGG + chr7_2:81469277-81469296 None:intergenic 40.0%
AGCTGTGTGATGTTATGGAA+AGG + chr7_2:81469413-81469432 None:intergenic 40.0%
! AACAGGCTTTTCAACTTCAC+TGG - chr7_2:81469743-81469762 Msa1081640:intron 40.0%
! GCATAAGTTGGATTCAGAGA+TGG + chr7_2:81469785-81469804 None:intergenic 40.0%
TTCTTGAAGACCAAATGCCA+AGG - chr7_2:81469809-81469828 Msa1081640:intron 40.0%
TCCTGTCCTTCTACAAAACA+AGG - chr7_2:81469901-81469920 Msa1081640:CDS 40.0%
CCTGTCCTTCTACAAAACAA+GGG - chr7_2:81469902-81469921 Msa1081640:CDS 40.0%
!!! AGAGACCCTTGTTTTGTAGA+AGG + chr7_2:81469910-81469929 None:intergenic 40.0%
TTCTCAGTCAATGAAGAGGA+TGG - chr7_2:81470018-81470037 Msa1081640:CDS 40.0%
TCTCAGTCAATGAAGAGGAT+GGG - chr7_2:81470019-81470038 Msa1081640:CDS 40.0%
! TGTTTCCTTGGGATTAGTGA+AGG - chr7_2:81468706-81468725 Msa1081640:CDS 40.0%
CCTTGAAGAGACATGTTGTA+GGG + chr7_2:81468800-81468819 None:intergenic 40.0%
CATATCTACGGTTGCATTTC+AGG - chr7_2:81469027-81469046 Msa1081640:CDS 40.0%
TATCTACGGTTGCATTTCAG+GGG - chr7_2:81469029-81469048 Msa1081640:CDS 40.0%
TCAGCACATGATACAATTCC+AGG + chr7_2:81469181-81469200 None:intergenic 40.0%
AATCAGGATGCTTCATGCAT+GGG + chr7_2:81469276-81469295 None:intergenic 40.0%
AAATCAGGATGCTTCATGCA+TGG + chr7_2:81469277-81469296 None:intergenic 40.0%
AGCTGTGTGATGTTATGGAA+AGG + chr7_2:81469413-81469432 None:intergenic 40.0%
! AACAGGCTTTTCAACTTCAC+TGG - chr7_2:81469743-81469762 Msa1081640:intron 40.0%
! GCATAAGTTGGATTCAGAGA+TGG + chr7_2:81469785-81469804 None:intergenic 40.0%
TTCTTGAAGACCAAATGCCA+AGG - chr7_2:81469809-81469828 Msa1081640:intron 40.0%
TCCTGTCCTTCTACAAAACA+AGG - chr7_2:81469901-81469920 Msa1081640:CDS 40.0%
CCTGTCCTTCTACAAAACAA+GGG - chr7_2:81469902-81469921 Msa1081640:CDS 40.0%
!!! AGAGACCCTTGTTTTGTAGA+AGG + chr7_2:81469910-81469929 None:intergenic 40.0%
TTCTCAGTCAATGAAGAGGA+TGG - chr7_2:81470018-81470037 Msa1081640:CDS 40.0%
TCTCAGTCAATGAAGAGGAT+GGG - chr7_2:81470019-81470038 Msa1081640:CDS 40.0%
! TTCCTTGGGATTAGTGAAGG+AGG - chr7_2:81468709-81468728 Msa1081640:CDS 45.0%
! TTAACAATCTCCTCGGCTTG+AGG + chr7_2:81468769-81468788 None:intergenic 45.0%
CCCTACAACATGTCTCTTCA+AGG - chr7_2:81468797-81468816 Msa1081640:CDS 45.0%
GCCTTGAAGAGACATGTTGT+AGG + chr7_2:81468801-81468820 None:intergenic 45.0%
! TGCAGTCTTATCAACTTGGC+TGG + chr7_2:81468832-81468851 None:intergenic 45.0%
GATTAGGGCTTCAATGCTTC+TGG + chr7_2:81469378-81469397 None:intergenic 45.0%
! GTGATGTTATGGAAAGGTGC+TGG + chr7_2:81469407-81469426 None:intergenic 45.0%
GTCTGAGCTGTGTGATGTTA+TGG + chr7_2:81469418-81469437 None:intergenic 45.0%
ATCCATCTCTACTGTTGTGG+TGG + chr7_2:81469846-81469865 None:intergenic 45.0%
TGGATCCATCTCTACTGTTG+TGG + chr7_2:81469849-81469868 None:intergenic 45.0%
!!! CCCTTGTTTTGTAGAAGGAC+AGG + chr7_2:81469905-81469924 None:intergenic 45.0%
TTTCTCCATTCGAACCAGTG+AGG + chr7_2:81470057-81470076 None:intergenic 45.0%
! TTCCTTGGGATTAGTGAAGG+AGG - chr7_2:81468709-81468728 Msa1081640:CDS 45.0%
! TTAACAATCTCCTCGGCTTG+AGG + chr7_2:81468769-81468788 None:intergenic 45.0%
CCCTACAACATGTCTCTTCA+AGG - chr7_2:81468797-81468816 Msa1081640:CDS 45.0%
GCCTTGAAGAGACATGTTGT+AGG + chr7_2:81468801-81468820 None:intergenic 45.0%
! TGCAGTCTTATCAACTTGGC+TGG + chr7_2:81468832-81468851 None:intergenic 45.0%
GATTAGGGCTTCAATGCTTC+TGG + chr7_2:81469378-81469397 None:intergenic 45.0%
! GTGATGTTATGGAAAGGTGC+TGG + chr7_2:81469407-81469426 None:intergenic 45.0%
GTCTGAGCTGTGTGATGTTA+TGG + chr7_2:81469418-81469437 None:intergenic 45.0%
ATCCATCTCTACTGTTGTGG+TGG + chr7_2:81469846-81469865 None:intergenic 45.0%
TGGATCCATCTCTACTGTTG+TGG + chr7_2:81469849-81469868 None:intergenic 45.0%
!!! CCCTTGTTTTGTAGAAGGAC+AGG + chr7_2:81469905-81469924 None:intergenic 45.0%
TTTCTCCATTCGAACCAGTG+AGG + chr7_2:81470057-81470076 None:intergenic 45.0%
TGCCTCCTTCACTAATCCCA+AGG + chr7_2:81468714-81468733 None:intergenic 50.0%
! ATTTCAGGGGTGTGACGCAT+CGG - chr7_2:81469042-81469061 Msa1081640:CDS 50.0%
!!! GTGTGACGCATCGGTTTTGT+TGG - chr7_2:81469051-81469070 Msa1081640:intron 50.0%
!! GTTTTGTTGGAGTCCACTGC+TGG - chr7_2:81469064-81469083 Msa1081640:intron 50.0%
!! GCTTTGGAGGAGAAATGTCC+TGG - chr7_2:81469160-81469179 Msa1081640:intron 50.0%
!! AGCAACGTGGGAAGTGCTTA+CGG - chr7_2:81469331-81469350 Msa1081640:CDS 50.0%
GTGCTTACGGGTAGAAGAGA+TGG - chr7_2:81469344-81469363 Msa1081640:CDS 50.0%
GGAGCACACACAATTGGAGT+AGG - chr7_2:81469701-81469720 Msa1081640:CDS 50.0%
GTCACTTAGGCCTTGGCATT+TGG + chr7_2:81469822-81469841 None:intergenic 50.0%
!! CTGTTGTGGTGGTGTCACTT+AGG + chr7_2:81469835-81469854 None:intergenic 50.0%
CACCACCACAACAGTAGAGA+TGG - chr7_2:81469841-81469860 Msa1081640:intron 50.0%
GAAGAGGATGGGAGCTATTG+AGG - chr7_2:81470030-81470049 Msa1081640:CDS 50.0%
TGCCTCCTTCACTAATCCCA+AGG + chr7_2:81468714-81468733 None:intergenic 50.0%
! ATTTCAGGGGTGTGACGCAT+CGG - chr7_2:81469042-81469061 Msa1081640:CDS 50.0%
!!! GTGTGACGCATCGGTTTTGT+TGG - chr7_2:81469051-81469070 Msa1081640:intron 50.0%
!! GTTTTGTTGGAGTCCACTGC+TGG - chr7_2:81469064-81469083 Msa1081640:intron 50.0%
!! GCTTTGGAGGAGAAATGTCC+TGG - chr7_2:81469160-81469179 Msa1081640:intron 50.0%
!! AGCAACGTGGGAAGTGCTTA+CGG - chr7_2:81469331-81469350 Msa1081640:CDS 50.0%
GTGCTTACGGGTAGAAGAGA+TGG - chr7_2:81469344-81469363 Msa1081640:CDS 50.0%
GGAGCACACACAATTGGAGT+AGG - chr7_2:81469701-81469720 Msa1081640:CDS 50.0%
GTCACTTAGGCCTTGGCATT+TGG + chr7_2:81469822-81469841 None:intergenic 50.0%
!! CTGTTGTGGTGGTGTCACTT+AGG + chr7_2:81469835-81469854 None:intergenic 50.0%
CACCACCACAACAGTAGAGA+TGG - chr7_2:81469841-81469860 Msa1081640:intron 50.0%
GAAGAGGATGGGAGCTATTG+AGG - chr7_2:81470030-81470049 Msa1081640:CDS 50.0%
TTAGTGAAGGAGGCAGCCTG+AGG - chr7_2:81468719-81468738 Msa1081640:CDS 55.0%
GAAGTCATGTCCTCAAGCCG+AGG - chr7_2:81468756-81468775 Msa1081640:CDS 55.0%
ATCAACTTGGCTGGCAGCTC+AGG + chr7_2:81468823-81468842 None:intergenic 55.0%
GGAGTCCACTGCTGGTAACA+CGG - chr7_2:81469072-81469091 Msa1081640:intron 55.0%
!! GCAACGTGGGAAGTGCTTAC+GGG - chr7_2:81469332-81469351 Msa1081640:CDS 55.0%
!! TGGTGGTGTCACTTAGGCCT+TGG + chr7_2:81469829-81469848 None:intergenic 55.0%
GGAGCTATTGAGGTCCTCAC+TGG - chr7_2:81470040-81470059 Msa1081640:CDS 55.0%
!! GAGGTCCTCACTGGTTCGAA+TGG - chr7_2:81470049-81470068 Msa1081640:CDS 55.0%
TTAGTGAAGGAGGCAGCCTG+AGG - chr7_2:81468719-81468738 Msa1081640:CDS 55.0%
GAAGTCATGTCCTCAAGCCG+AGG - chr7_2:81468756-81468775 Msa1081640:CDS 55.0%
ATCAACTTGGCTGGCAGCTC+AGG + chr7_2:81468823-81468842 None:intergenic 55.0%
GGAGTCCACTGCTGGTAACA+CGG - chr7_2:81469072-81469091 Msa1081640:intron 55.0%
!! GCAACGTGGGAAGTGCTTAC+GGG - chr7_2:81469332-81469351 Msa1081640:CDS 55.0%
!! TGGTGGTGTCACTTAGGCCT+TGG + chr7_2:81469829-81469848 None:intergenic 55.0%
GGAGCTATTGAGGTCCTCAC+TGG - chr7_2:81470040-81470059 Msa1081640:CDS 55.0%
!! GAGGTCCTCACTGGTTCGAA+TGG - chr7_2:81470049-81470068 Msa1081640:CDS 55.0%
GTCCACTGCTGGTAACACGG+CGG - chr7_2:81469075-81469094 Msa1081640:intron 60.0%
TGCTGGTAACACGGCGGAGA+AGG - chr7_2:81469081-81469100 Msa1081640:intron 60.0%
GTCCACTGCTGGTAACACGG+CGG - chr7_2:81469075-81469094 Msa1081640:intron 60.0%
TGCTGGTAACACGGCGGAGA+AGG - chr7_2:81469081-81469100 Msa1081640:intron 60.0%
CTCCGCCGTGTTACCAGCAG+TGG + chr7_2:81469080-81469099 None:intergenic 65.0%
CTCCGCCGTGTTACCAGCAG+TGG + chr7_2:81469080-81469099 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 81468664 81470105 81468664 ID=Msa1081640;Name=Msa1081640
chr7_2 mRNA 81468664 81470105 81468664 ID=Msa1081640-mRNA-1;Parent=Msa1081640;Name=Msa1081640-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|4|0|320
chr7_2 exon 81469896 81470105 81469896 ID=Msa1081640-mRNA-1:exon:20860;Parent=Msa1081640-mRNA-1
chr7_2 exon 81469541 81469720 81469541 ID=Msa1081640-mRNA-1:exon:20859;Parent=Msa1081640-mRNA-1
chr7_2 exon 81469281 81469449 81469281 ID=Msa1081640-mRNA-1:exon:20858;Parent=Msa1081640-mRNA-1
chr7_2 exon 81468664 81469067 81468664 ID=Msa1081640-mRNA-1:exon:20857;Parent=Msa1081640-mRNA-1
chr7_2 CDS 81469896 81470105 81469896 ID=Msa1081640-mRNA-1:cds;Parent=Msa1081640-mRNA-1
chr7_2 CDS 81469541 81469720 81469541 ID=Msa1081640-mRNA-1:cds;Parent=Msa1081640-mRNA-1
chr7_2 CDS 81469281 81469449 81469281 ID=Msa1081640-mRNA-1:cds;Parent=Msa1081640-mRNA-1
chr7_2 CDS 81468664 81469067 81468664 ID=Msa1081640-mRNA-1:cds;Parent=Msa1081640-mRNA-1
Gene Sequence

>Msa1081640

ATGAAGATGAAATTCTTCCTTGTAGCTTCTATGATGATTTTCTGTTTCCTTGGGATTAGTGAAGGAGGCAGCCTGAGGAAGAATTTCTATAAGAAGTCATGTCCTCAAGCCGAGGAGATTGTTAAGAACATAACCCTACAACATGTCTCTTCAAGGCCTGAGCTGCCAGCCAAGTTGATAAGACTGCATTTTCATGACTGTTTTGTTAGGGGGTGTGACGCATCGGTTTTGTTGGAGTCCACTGCTGGTAACACGGCGGAGAAGGATGCCATTCCTAATTTATCATTAGCAGGCTTTGATGTGATAGAAGACATAAAAGAAGCTTTGGAGGAGAAATGTCCTGGAATTGTATCATGTGCTGATATACTCACATTGGCTACTAGAGATGCTTTTAATGATAAAGCAACGTGGGAAGTGCTTACGGGTAGAAGAGATGGTACTGTGTCCAGAAGCATTGAAGCCCTAATCAATATTCCAGCACCTTTCCATAACATCACACAGCTCAGACAAATCTTTGCTAGCAAAAAGCTTACTCTTCATGACTTGGTTGTATTATCAGGAGCACACACAATTGGAGTAGGACATTGCAACTTATTCAGCAACAGGCTTTTCAACTTCACTGGAAAAGGTGATCAAGATCCATCTCTGAATCCAACTTATGCAAATTTCTTGAAGACCAAATGCCAAGGCCTAAGTGACACCACCACAACAGTAGAGATGGATCCAAATAGCTCAACAACATTTGACAATGACTATTATCCTGTCCTTCTACAAAACAAGGGTCTCTTCACATCAGACGCTGCTCTTCTAACAACCAAGCAATCTAGAAACATTGTTAATGAATTGGTTTCACAAAATAAATTCTTCACTGAGTTTTCTCAGTCAATGAAGAGGATGGGAGCTATTGAGGTCCTCACTGGTTCGAATGGAGAAATTAGAAGGAAGTGCTCAGTTGTTAATTAA
Protein sequence

>Msa1081640

MKMKFFLVASMMIFCFLGISEGGSLRKNFYKKSCPQAEEIVKNITLQHVSSRPELPAKLIRLHFHDCFVRGCDASVLLESTAGNTAEKDAIPNLSLAGFDVIEDIKEALEEKCPGIVSCADILTLATRDAFNDKATWEVLTGRRDGTVSRSIEALINIPAPFHNITQLRQIFASKKLTLHDLVVLSGAHTIGVGHCNLFSNRLFNFTGKGDQDPSLNPTYANFLKTKCQGLSDTTTTVEMDPNSSTTFDNDYYPVLLQNKGLFTSDAALLTTKQSRNIVNELVSQNKFFTEFSQSMKRMGAIEVLTGSNGEIRRKCSVVN*