AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1081610


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1081610 MtrunA17_Chr7g0268501 97.812 320 7 0 1 320 1 320 0.0 654
Msa1081610 MtrunA17_Chr7g0268521 97.812 320 7 0 1 320 1 320 0.0 654
Msa1081610 MtrunA17_Chr4g0024121 52.905 327 146 5 1 320 1 326 1.65e-119 347
Msa1081610 MtrunA17_Chr2g0322861 52.280 329 144 6 1 320 62 386 3.04e-116 340
Msa1081610 MtrunA17_Chr8g0371381 46.580 307 152 5 19 320 20 319 5.36e-96 286
Msa1081610 MtrunA17_Chr5g0405991 47.319 317 149 8 12 320 10 316 6.11e-93 279
Msa1081610 MtrunA17_Chr1g0157051 45.079 315 163 5 11 319 7 317 3.97e-91 274
Msa1081610 MtrunA17_Chr3g0128061 45.625 320 168 5 6 320 8 326 2.29e-90 273
Msa1081610 MtrunA17_Chr1g0164891 49.667 300 143 5 29 320 93 392 5.51e-90 274
Msa1081610 MtrunA17_Chr1g0204011 44.586 314 165 6 11 320 14 322 5.62e-88 266
Msa1081610 MtrunA17_Chr2g0279041 45.752 306 155 4 22 320 24 325 2.08e-87 265
Msa1081610 MtrunA17_Chr2g0292211 44.548 321 169 5 6 320 24 341 4.98e-87 265
Msa1081610 MtrunA17_Chr7g0258811 43.827 324 174 6 4 320 49 371 7.04e-87 265
Msa1081610 MtrunA17_Chr2g0292241 43.731 327 171 5 7 320 4 330 1.55e-86 264
Msa1081610 MtrunA17_Chr1g0175561 43.614 321 173 6 8 320 6 326 1.78e-86 263
Msa1081610 MtrunA17_Chr4g0070951 43.210 324 171 5 5 320 11 329 3.52e-86 262
Msa1081610 MtrunA17_Chr5g0404721 45.981 311 163 4 15 320 20 330 2.40e-85 260
Msa1081610 MtrunA17_Chr2g0292261 44.062 320 173 4 7 320 11 330 1.34e-84 259
Msa1081610 MtrunA17_Chr2g0292271 44.795 317 167 5 12 320 14 330 5.89e-84 257
Msa1081610 MtrunA17_Chr2g0292251 44.951 307 163 4 20 320 23 329 7.28e-84 257
Msa1081610 MtrunA17_Chr5g0402581 44.795 317 167 6 11 320 11 326 8.57e-84 256
Msa1081610 MtrunA17_Chr2g0291751 42.368 321 179 4 6 320 10 330 1.24e-83 256
Msa1081610 MtrunA17_Chr8g0372601 44.872 312 167 4 14 320 19 330 1.09e-82 253
Msa1081610 MtrunA17_Chr6g0460711 42.902 317 173 5 7 320 3 314 1.44e-82 252
Msa1081610 MtrunA17_Chr2g0292181 41.088 331 183 5 2 320 9 339 3.00e-82 253
Msa1081610 MtrunA17_Chr4g0063671 39.939 328 179 5 1 320 3 320 3.56e-81 249
Msa1081610 MtrunA17_Chr1g0194151 42.767 318 174 4 11 320 16 333 5.30e-81 249
Msa1081610 MtrunA17_Chr1g0194271 40.708 339 182 5 1 320 2 340 8.85e-81 248
Msa1081610 MtrunA17_Chr2g0292111 42.812 320 177 4 7 320 11 330 9.35e-81 249
Msa1081610 MtrunA17_Chr5g0402571 42.902 317 173 7 11 320 11 326 1.11e-80 248
Msa1081610 MtrunA17_Chr6g0477071 40.373 322 177 9 3 320 32 342 2.58e-80 247
Msa1081610 MtrunA17_Chr1g0188431 41.433 321 174 6 3 320 18 327 4.20e-80 246
Msa1081610 MtrunA17_Chr2g0320071 40.373 322 179 5 3 320 5 317 3.03e-78 241
Msa1081610 MtrunA17_Chr2g0292151 42.500 320 178 4 7 320 11 330 4.14e-78 242
Msa1081610 MtrunA17_Chr2g0292091 41.875 320 179 5 8 320 6 325 7.00e-78 241
Msa1081610 MtrunA17_Chr3g0129051 42.173 313 168 5 10 316 13 318 9.15e-78 240
Msa1081610 MtrunA17_Chr7g0225221 41.667 324 178 6 2 320 3 320 9.38e-78 240
Msa1081610 MtrunA17_Chr7g0254201 41.472 299 166 5 25 320 20 312 2.49e-77 239
Msa1081610 MtrunA17_Chr2g0292101 42.368 321 178 5 7 320 6 326 6.20e-77 239
Msa1081610 MtrunA17_Chr2g0299691 41.896 327 173 7 8 320 35 358 3.99e-76 237
Msa1081610 MtrunA17_Chr1g0148021 44.272 323 169 8 6 320 9 328 4.90e-76 236
Msa1081610 MtrunA17_Chr4g0068621 44.262 305 161 6 22 320 35 336 7.56e-76 236
Msa1081610 MtrunA17_Chr2g0296621 43.243 296 158 5 28 320 53 341 1.12e-75 235
Msa1081610 MtrunA17_Chr4g0053871 43.425 327 170 8 2 319 3 323 4.05e-75 233
Msa1081610 MtrunA17_Chr8g0364291 41.806 299 168 4 28 320 26 324 5.34e-75 233
Msa1081610 MtrunA17_Chr7g0254231 40.532 301 167 5 23 320 20 311 1.50e-74 231
Msa1081610 MtrunA17_Chr4g0046131 41.914 303 167 6 25 318 42 344 1.52e-74 233
Msa1081610 MtrunA17_Chr2g0320101 39.308 318 182 4 7 320 7 317 2.12e-74 231
Msa1081610 MtrunA17_Chr3g0114451 40.367 327 179 6 1 320 1 318 3.23e-74 231
Msa1081610 MtrunA17_Chr2g0320091 39.812 319 180 5 7 320 7 318 1.38e-73 229
Msa1081610 MtrunA17_Chr1g0213061 40.063 317 175 6 11 320 13 321 1.44e-73 229
Msa1081610 MtrunA17_Chr2g0292291 41.558 308 173 5 20 320 25 332 1.68e-72 228
Msa1081610 MtrunA17_Chr5g0401431 40.979 327 183 7 2 319 3 328 3.59e-72 226
Msa1081610 MtrunA17_Chr2g0320061 39.498 319 181 4 7 320 7 318 4.88e-72 225
Msa1081610 MtrunA17_Chr2g0320051 39.812 319 180 4 7 320 7 318 1.06e-71 224
Msa1081610 MtrunA17_Chr4g0013721 40.000 305 176 5 20 320 95 396 6.79e-71 225
Msa1081610 MtrunA17_Chr4g0072091 42.574 303 164 5 25 320 24 323 1.88e-70 221
Msa1081610 MtrunA17_Chr4g0076211 42.712 295 158 6 30 320 46 333 1.89e-70 222
Msa1081610 MtrunA17_Chr5g0400331 42.810 306 165 5 25 320 26 331 2.08e-70 221
Msa1081610 MtrunA17_Chr4g0043391 38.838 327 183 6 2 320 7 324 8.76e-70 220
Msa1081610 MtrunA17_Chr2g0320031 39.198 324 182 7 3 320 5 319 1.13e-69 219
Msa1081610 MtrunA17_Chr7g0244461 38.339 313 181 5 12 320 8 312 2.25e-69 218
Msa1081610 MtrunA17_Chr2g0279061 45.946 259 129 4 69 320 12 266 2.48e-69 217
Msa1081610 MtrunA17_Chr1g0155611 42.715 302 167 4 25 320 46 347 7.47e-69 218
Msa1081610 MtrunA17_Chr5g0438021 38.650 326 186 6 1 320 8 325 1.01e-68 217
Msa1081610 MtrunA17_Chr5g0432441 39.077 325 177 8 10 320 9 326 1.68e-68 216
Msa1081610 MtrunA17_Chr3g0129061 40.256 313 174 5 10 316 13 318 4.89e-68 215
Msa1081610 MtrunA17_Chr2g0329641 39.474 304 172 5 25 320 36 335 6.30e-68 215
Msa1081610 MtrunA17_Chr4g0038161 38.298 329 183 6 3 320 1 320 1.15e-67 214
Msa1081610 MtrunA17_Chr5g0432331 40.909 330 176 8 1 320 32 352 1.40e-67 215
Msa1081610 MtrunA17_Chr1g0197411 38.298 329 188 8 5 320 4 330 1.59e-67 214
Msa1081610 MtrunA17_Chr4g0038171 39.739 307 165 5 25 320 24 321 4.52e-67 213
Msa1081610 MtrunA17_Chr4g0038151 37.879 330 184 7 3 320 1 321 5.04e-67 213
Msa1081610 MtrunA17_Chr3g0136751 40.923 325 179 6 2 320 5 322 5.93e-67 213
Msa1081610 MtrunA17_Chr7g0244451 37.654 324 190 5 1 320 1 316 3.17e-66 210
Msa1081610 MtrunA17_Chr4g0013821 37.667 300 180 5 25 320 28 324 6.36e-66 210
Msa1081610 MtrunA17_Chr3g0129041 40.694 317 175 5 10 320 13 322 7.28e-66 209
Msa1081610 MtrunA17_Chr5g0432351 39.697 330 180 9 1 320 1 321 1.20e-65 209
Msa1081610 MtrunA17_Chr4g0013191 37.647 340 179 7 7 320 8 340 1.24e-65 209
Msa1081610 MtrunA17_Chr7g0224371 37.730 326 187 6 1 320 7 322 1.93e-65 209
Msa1081610 MtrunA17_Chr4g0013171 38.944 303 172 6 24 320 26 321 2.22e-65 208
Msa1081610 MtrunA17_Chr3g0106901 38.750 320 182 5 5 320 14 323 2.25e-65 208
Msa1081610 MtrunA17_Chr4g0013181 39.130 299 169 6 28 320 62 353 1.09e-64 207
Msa1081610 MtrunA17_Chr3g0106921 37.188 320 186 7 8 320 9 320 1.36e-64 206
Msa1081610 MtrunA17_Chr2g0316481 36.119 335 177 6 19 317 70 403 2.68e-64 208
Msa1081610 MtrunA17_Chr5g0432341 39.458 332 178 10 1 320 1 321 6.27e-64 204
Msa1081610 MtrunA17_Chr2g0316791 35.928 334 179 5 19 317 70 403 2.33e-63 206
Msa1081610 MtrunA17_Chr6g0467251 36.728 324 187 9 6 320 14 328 2.35e-63 204
Msa1081610 MtrunA17_Chr4g0013201 38.333 300 174 4 25 320 46 338 2.63e-63 204
Msa1081610 MtrunA17_Chr2g0316831 36.119 335 177 6 19 317 106 439 3.43e-63 206
Msa1081610 MtrunA17_Chr2g0278671 40.328 305 168 6 25 320 24 323 6.69e-63 202
Msa1081610 MtrunA17_Chr6g0467161 37.195 328 185 8 5 320 18 336 7.07e-63 202
Msa1081610 MtrunA17_Chr2g0316191 35.224 335 181 5 19 317 70 404 1.47e-62 204
Msa1081610 MtrunA17_Chr3g0107881 37.846 325 184 8 5 320 9 324 2.25e-62 201
Msa1081610 MtrunA17_Chr6g0467121 37.576 330 180 10 5 320 46 363 9.18e-62 201
Msa1081610 MtrunA17_Chr2g0311251 36.012 336 179 7 19 319 5 339 2.01e-60 196
Msa1081610 MtrunA17_Chr6g0451571 37.654 324 188 9 5 320 17 334 4.99e-60 195
Msa1081610 MtrunA17_Chr2g0311241 32.891 377 176 6 19 319 54 429 1.02e-59 197
Msa1081610 MtrunA17_Chr5g0413051 35.897 312 185 8 21 320 69 377 2.11e-59 194
Msa1081610 MtrunA17_Chr4g0075241 35.294 306 189 6 21 320 25 327 5.57e-56 184
Msa1081610 MtrunA17_Chr1g0181431 35.463 313 180 8 18 320 23 323 2.69e-55 182
Msa1081610 MtrunA17_Chr1g0181511 35.762 302 183 4 25 320 27 323 4.64e-55 182
Msa1081610 MtrunA17_Chr4g0074851 35.494 324 186 8 5 320 20 328 3.45e-54 180
Msa1081610 MtrunA17_Chr5g0421411 37.063 286 161 10 49 320 5 285 4.93e-54 178
Msa1081610 MtrunA17_Chr1g0181481 34.641 306 181 7 25 320 27 323 1.38e-52 176
Msa1081610 MtrunA17_Chr7g0268491 92.941 85 6 0 236 320 13 97 4.50e-50 161
Msa1081610 MtrunA17_Chr4g0004591 32.492 317 154 4 25 319 77 355 5.18e-48 164
Msa1081610 MtrunA17_Chr2g0316811 38.428 229 122 3 19 228 44 272 7.18e-46 158
Msa1081610 MtrunA17_Chr5g0432401 33.639 327 157 9 4 319 8 285 1.56e-43 150
Msa1081610 MtrunA17_Chr2g0292281 42.381 210 106 5 116 320 17 216 8.24e-42 145
Msa1081610 MtrunA17_Chr2g0316141 32.155 283 138 6 71 317 11 275 3.40e-38 137
Msa1081610 MtrunA17_Chr2g0316181 32.155 283 138 6 71 317 11 275 3.40e-38 137
Msa1081610 MtrunA17_Chr3g0114461 37.234 188 109 3 135 320 12 192 3.02e-33 121
Msa1081610 MtrunA17_Chr3g0114491 48.598 107 54 1 25 130 18 124 5.54e-28 105
Msa1081610 MtrunA17_Chr1g0196191 71.875 64 18 0 67 130 27 90 5.35e-24 95.9
Msa1081610 MtrunA17_Chr6g0468731 64.179 67 21 1 64 130 22 85 3.19e-23 91.7
Msa1081610 MtrunA17_Chr1g0181491 37.391 115 71 1 17 131 4 117 2.47e-21 88.6
Msa1081610 MtrunA17_Chr1g0181501 30.526 190 122 4 135 320 6 189 1.12e-19 85.1
Msa1081610 MtrunA17_Chr7g0254181 36.879 141 76 4 77 207 12 149 7.71e-18 79.3
Msa1081610 MtrunA17_Chr5g0432321 35.484 124 72 2 143 266 17 132 8.93e-16 72.8
Msa1081610 MtrunA17_Chr2g0316771 24.444 180 103 4 170 317 5 183 2.36e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1081610 AT1G05260.1 55.000 320 136 5 8 320 7 325 1.69e-120 349
Msa1081610 AT4G11290.1 53.750 320 141 5 7 320 8 326 4.19e-116 338
Msa1081610 AT1G05240.1 51.505 299 137 4 28 320 29 325 4.18e-109 320
Msa1081610 AT1G05250.1 51.505 299 137 4 28 320 29 325 4.18e-109 320
Msa1081610 AT2G39040.1 51.466 307 140 4 23 320 44 350 1.58e-107 317
Msa1081610 AT3G21770.1 51.447 311 143 5 16 319 18 327 3.42e-107 316
Msa1081610 AT5G15180.1 52.333 300 137 4 25 320 32 329 1.61e-106 314
Msa1081610 AT3G01190.1 51.090 321 149 5 4 320 5 321 2.13e-106 313
Msa1081610 AT5G42180.1 44.062 320 172 4 3 319 1 316 4.36e-92 277
Msa1081610 AT5G64120.1 45.638 298 154 5 26 320 36 328 8.96e-87 264
Msa1081610 AT5G17820.1 41.745 321 175 5 3 320 2 313 6.15e-85 258
Msa1081610 AT2G24800.1 48.845 303 144 6 25 320 31 329 1.97e-84 258
Msa1081610 AT5G06720.1 42.547 322 179 4 5 320 12 333 2.27e-84 258
Msa1081610 AT5G17820.2 41.745 321 175 5 3 320 55 366 1.12e-83 257
Msa1081610 AT2G18150.1 43.894 303 165 4 23 320 34 336 2.40e-83 255
Msa1081610 AT5G51890.1 44.771 306 154 7 23 320 24 322 2.60e-83 254
Msa1081610 AT5G66390.1 44.409 313 167 5 14 320 22 333 6.96e-83 254
Msa1081610 AT4G36430.1 42.357 314 176 4 12 320 17 330 1.48e-82 253
Msa1081610 AT4G31760.1 44.620 316 165 5 11 320 15 326 1.88e-82 253
Msa1081610 AT5G06730.1 42.547 322 179 4 5 320 13 334 4.82e-82 253
Msa1081610 AT2G41480.1 40.798 326 180 5 4 320 7 328 4.97e-82 251
Msa1081610 AT2G18140.1 42.671 307 168 5 22 320 29 335 5.94e-82 252
Msa1081610 AT3G03670.1 40.123 324 187 4 1 320 1 321 8.19e-82 251
Msa1081610 AT5G39580.1 41.304 322 179 7 3 320 4 319 7.51e-81 248
Msa1081610 AT5G19890.1 42.857 315 166 6 14 320 19 327 2.43e-80 247
Msa1081610 AT5G64100.1 43.478 299 156 5 28 320 40 331 4.89e-80 246
Msa1081610 AT5G14130.1 44.444 324 168 9 3 320 13 330 6.50e-80 246
Msa1081610 AT4G33420.1 42.006 319 169 7 8 320 17 325 7.31e-80 246
Msa1081610 AT5G14130.2 44.444 324 168 9 3 320 54 371 2.01e-79 246
Msa1081610 AT2G38380.1 42.547 322 176 6 8 320 12 333 2.33e-79 245
Msa1081610 AT4G33420.2 42.006 319 169 7 8 320 64 372 5.35e-79 245
Msa1081610 AT2G38390.1 41.925 322 178 6 8 320 12 333 9.02e-79 244
Msa1081610 AT5G19880.1 42.357 314 172 6 16 320 16 329 7.01e-78 241
Msa1081610 AT4G37530.1 43.421 304 163 6 25 320 27 329 2.23e-77 240
Msa1081610 AT2G18980.1 43.344 323 170 6 5 320 7 323 2.39e-77 239
Msa1081610 AT1G71695.1 43.894 303 156 8 25 320 44 339 3.02e-77 240
Msa1081610 AT4G37520.2 43.709 302 162 6 25 320 27 326 7.39e-77 238
Msa1081610 AT4G37520.1 43.421 304 163 6 25 320 27 329 9.52e-77 238
Msa1081610 AT5G67400.1 42.378 328 177 7 4 320 3 329 1.07e-76 238
Msa1081610 AT4G26010.1 39.937 318 175 6 7 320 4 309 1.65e-76 237
Msa1081610 AT4G26010.2 39.937 318 175 6 7 320 32 337 3.45e-76 237
Msa1081610 AT3G49960.1 44.408 304 160 6 25 320 27 329 5.38e-76 236
Msa1081610 AT3G50990.1 42.157 306 172 3 20 320 36 341 2.13e-75 235
Msa1081610 AT1G44970.1 44.516 310 166 4 17 320 37 346 2.33e-75 235
Msa1081610 AT3G32980.1 41.433 321 176 6 11 320 15 334 3.42e-75 235
Msa1081610 AT4G30170.1 42.574 303 163 5 25 320 27 325 1.62e-74 232
Msa1081610 AT4G08770.1 40.850 306 173 5 23 320 22 327 2.36e-74 233
Msa1081610 AT5G64110.1 41.860 301 164 4 26 320 35 330 2.87e-74 232
Msa1081610 AT1G49570.1 42.667 300 165 5 24 316 47 346 2.29e-72 228
Msa1081610 AT1G14550.1 40.789 304 164 6 25 320 26 321 2.53e-72 226
Msa1081610 AT4G25980.1 41.214 313 172 6 16 320 18 326 5.61e-72 226
Msa1081610 AT5G22410.1 38.486 317 182 6 7 316 11 321 7.16e-72 226
Msa1081610 AT2G35380.1 43.366 309 165 5 22 320 27 335 3.27e-71 224
Msa1081610 AT1G77100.1 40.461 304 165 6 25 320 24 319 9.59e-71 223
Msa1081610 AT3G49110.1 39.542 306 177 4 23 320 31 336 3.09e-70 222
Msa1081610 AT3G49120.1 39.610 308 178 4 21 320 28 335 3.60e-70 222
Msa1081610 AT4G08780.1 39.803 304 175 4 25 320 24 327 4.44e-70 221
Msa1081610 AT4G33870.1 36.812 345 177 6 14 317 54 398 4.05e-69 221
Msa1081610 AT5G05340.1 39.073 302 171 5 25 320 30 324 9.51e-69 218
Msa1081610 AT1G14540.1 38.154 325 186 5 1 320 1 315 1.77e-68 216
Msa1081610 AT2G22420.1 38.614 303 179 5 22 320 20 319 4.33e-68 216
Msa1081610 AT4G17690.1 39.803 304 170 6 24 320 25 322 3.28e-67 214
Msa1081610 AT3G28200.1 40.397 302 168 5 25 320 21 316 4.12e-67 213
Msa1081610 AT1G34510.1 37.107 318 184 6 7 320 4 309 4.88e-67 213
Msa1081610 AT4G37530.2 44.531 256 134 5 23 271 25 279 4.05e-66 209
Msa1081610 AT4G16270.1 40.067 297 171 5 29 320 54 348 1.62e-65 210
Msa1081610 AT5G40150.1 39.934 303 169 6 25 320 32 328 2.49e-64 206
Msa1081610 AT5G47000.1 36.137 321 190 6 11 320 14 330 5.27e-64 206
Msa1081610 AT2G34060.1 39.934 303 173 6 25 318 42 344 7.94e-64 206
Msa1081610 AT1G68850.1 37.798 336 181 11 5 320 8 335 1.63e-63 204
Msa1081610 AT5G24070.1 37.061 313 182 6 18 320 28 335 4.05e-63 203
Msa1081610 AT1G30870.1 38.538 301 168 7 28 320 54 345 4.23e-63 204
Msa1081610 AT2G43480.1 36.709 316 182 7 18 320 25 335 3.94e-61 198
Msa1081610 AT5G58390.1 36.875 320 188 6 8 320 4 316 3.84e-60 195
Msa1081610 AT5G58400.1 37.304 319 181 8 9 316 11 321 3.00e-59 193
Msa1081610 AT1G24110.1 37.037 324 186 7 5 320 9 322 5.95e-58 190
Msa1081610 AT4G21960.1 35.583 326 194 6 6 320 7 327 3.35e-56 185
Msa1081610 AT3G17070.1 34.451 328 198 9 6 320 16 339 5.25e-53 177
Msa1081610 AT2G37130.1 35.275 309 180 8 23 320 28 327 1.64e-52 176
Msa1081610 AT2G37130.2 35.197 304 177 8 28 320 2 296 1.78e-51 172
Msa1081610 AT2G35380.2 39.592 245 138 4 86 320 3 247 3.32e-46 157
Msa1081610 AT5G39580.2 42.632 190 102 4 3 190 4 188 2.42e-45 154
Msa1081610 AT2G24800.2 50.909 165 76 2 25 187 31 192 1.09e-43 150
Msa1081610 AT4G25980.2 47.159 176 87 4 16 189 63 234 1.09e-43 151
Msa1081610 AT3G17070.2 33.333 264 161 9 67 320 18 276 1.02e-35 130

Find 60 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATGTTGTTGAGCTATT+TGG 0.173041 7_2:-81454277 None:intergenic
CATGACTTGGTTGTATTATC+AGG 0.207951 7_2:+81453878 Msa1081610:CDS
AAGCCTGCTAATGATAAATT+TGG 0.210163 7_2:-81453522 None:intergenic
ATTCTTCCTTGTAGCTTCTA+TGG 0.251513 7_2:+81453140 Msa1081610:CDS
GTCTGAGCTGTGTGATATTA+TGG 0.266226 7_2:-81453826 None:intergenic
AGTTTAAGAATAAACCAAAT+TGG 0.267577 7_2:+81453729 Msa1081610:intron
CCCGTAAGCACTTCCCAATT+TGG 0.267771 7_2:-81453743 None:intergenic
GTCACTTAGGCCTTGGCATT+TGG 0.297824 7_2:-81454230 None:intergenic
TAGAAACATTGTTAATGAAT+TGG 0.309617 7_2:+81454378 Msa1081610:CDS
TTCAAGAAATTTGCATAAGT+TGG 0.318870 7_2:-81454205 None:intergenic
ATCAACTTGGCTGGCAGCTC+AGG 0.326426 7_2:-81453285 None:intergenic
ACCAAATTGGGAAGTGCTTA+CGG 0.361617 7_2:+81453742 Msa1081610:CDS
TCAGCACATGATACAATTCC+TGG 0.383508 7_2:-81453588 None:intergenic
AACAATGTTTCTAGATTGCT+TGG 0.397011 7_2:-81454368 None:intergenic
CCCTACAACATGTCTCTTCA+AGG 0.409923 7_2:+81453262 Msa1081610:CDS
TTTATAGGAGCACACACAAT+TGG 0.421672 7_2:+81454106 Msa1081610:intron
ATTGCAACTTATTCAGCAAC+AGG 0.429672 7_2:+81454137 Msa1081610:CDS
CCAAATTGGGAAGTGCTTAC+GGG 0.431778 7_2:+81453743 Msa1081610:CDS
ATTCCAAATTTATCATTAGC+AGG 0.432800 7_2:+81453519 Msa1081610:CDS
GTTCGAATGGAGAAATTAGA+AGG 0.434571 7_2:+81454473 Msa1081610:CDS
TCTTATAGAAATTCTTCCTC+AGG 0.441182 7_2:-81453200 None:intergenic
GTTTAAGAATAAACCAAATT+GGG 0.443819 7_2:+81453730 Msa1081610:intron
AAGGTGCTGGAATATTGATC+AGG 0.461887 7_2:-81453802 None:intergenic
TGGTGGTGTCACTTAGGCCT+TGG 0.470093 7_2:-81454237 None:intergenic
AGCTGGTAACACTGCGGAGA+AGG 0.483375 7_2:+81453491 Msa1081610:CDS
AAAGCTTACTCTTCATGACT+TGG 0.493798 7_2:+81453865 Msa1081610:CDS
CTGTTGTGGTGGTGTCACTT+AGG 0.496811 7_2:-81454243 None:intergenic
GAAGAGGATGGGAGCTATTG+AGG 0.498561 7_2:+81454441 Msa1081610:CDS
TGCAGTCTTATCAACTTGGC+TGG 0.499023 7_2:-81453294 None:intergenic
GTTTCAGGGGTGTGACGCAT+CGG 0.508181 7_2:+81453452 Msa1081610:intron
TTCTCAGTCAATGAAGAGGA+TGG 0.515611 7_2:+81454429 Msa1081610:CDS
GCATAAGTTGGATTCAGAGA+TGG 0.521194 7_2:-81454193 None:intergenic
GGAGCTATTGAGGTCCTCAC+TGG 0.526293 7_2:+81454451 Msa1081610:CDS
TGTTTCATTGGGATTAGTGA+AGG 0.528117 7_2:+81453171 Msa1081610:CDS
TCCTGTCCTTCTACAAAACA+AGG 0.528441 7_2:+81454312 Msa1081610:CDS
TGGATCCATCTCTACTGTTG+TGG 0.535692 7_2:-81454257 None:intergenic
CACCACCACAACAGTAGAGA+TGG 0.539448 7_2:+81454252 Msa1081610:CDS
TTAACAATCTCCTCAGCTTG+AGG 0.546103 7_2:-81453231 None:intergenic
AAAATGCAGTCTTATCAACT+TGG 0.547582 7_2:-81453298 None:intergenic
CCTTGAAGAGACATGTTGTA+GGG 0.548319 7_2:-81453262 None:intergenic
GCCTTGAAGAGACATGTTGT+AGG 0.550855 7_2:-81453263 None:intergenic
TGCTAATGATAAATTTGGAA+TGG 0.556780 7_2:-81453517 None:intergenic
GTGATATTATGGAAAGGTGC+TGG 0.567497 7_2:-81453815 None:intergenic
CTCCGCAGTGTTACCAGCTG+CGG 0.571046 7_2:-81453487 None:intergenic
ATCCATCTCTACTGTTGTGG+TGG 0.572153 7_2:-81454254 None:intergenic
GAGGTCCTCACTGGTTCGAA+TGG 0.575650 7_2:+81454460 Msa1081610:CDS
TCTCAGTCAATGAAGAGGAT+GGG 0.577113 7_2:+81454430 Msa1081610:CDS
GTGCTTACGGGTAGAAGAGA+TGG 0.590073 7_2:+81453755 Msa1081610:CDS
TTCTTGAAGACCAAATGCCA+AGG 0.601738 7_2:+81454220 Msa1081610:CDS
AAAGCACCATAGAAGCTACA+AGG 0.611637 7_2:-81453146 None:intergenic
TTCATTGGGATTAGTGAAGG+AGG 0.626140 7_2:+81453174 Msa1081610:CDS
AGGTGCTGGAATATTGATCA+GGG 0.633257 7_2:-81453801 None:intergenic
GGAGCACACACAATTGGAGT+AGG 0.649757 7_2:+81454112 Msa1081610:intron
TTAGTGAAGGAGGCAGCCTG+AGG 0.650005 7_2:+81453184 Msa1081610:CDS
GAAGTCATGTCCTCAAGCTG+AGG 0.657533 7_2:+81453221 Msa1081610:CDS
ATGTGCTGATATACTCACAT+TGG 0.669867 7_2:+81453602 Msa1081610:CDS
CCTGTCCTTCTACAAAACAA+GGG 0.678901 7_2:+81454313 Msa1081610:CDS
TTTCTCCATTCGAACCAGTG+AGG 0.691397 7_2:-81454465 None:intergenic
AGCTGTGTGATATTATGGAA+AGG 0.714907 7_2:-81453821 None:intergenic
GTCCGCAGCTGGTAACACTG+CGG 0.749730 7_2:+81453485 Msa1081610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGAATATGTATAAATTTA+TGG - chr7_2:81453667-81453686 None:intergenic 10.0%
!! TAAGAATATGTATAAATTTA+TGG - chr7_2:81453667-81453686 None:intergenic 10.0%
!! TAAATATGAATGAATAAATC+AGG - chr7_2:81453702-81453721 None:intergenic 15.0%
!! TAAATATGAATGAATAAATC+AGG - chr7_2:81453702-81453721 None:intergenic 15.0%
!! AGTTTAAGAATAAACCAAAT+TGG + chr7_2:81453729-81453748 Msa1081610:intron 20.0%
!! GTTTAAGAATAAACCAAATT+GGG + chr7_2:81453730-81453749 Msa1081610:intron 20.0%
!! ACTTAAATTATTACATGTGT+TGG - chr7_2:81454020-81454039 None:intergenic 20.0%
!! ACATGTAATAATTTAAGTCA+CGG + chr7_2:81454022-81454041 Msa1081610:intron 20.0%
!! TACTAGTTAAATTAACATGT+TGG + chr7_2:81454074-81454093 Msa1081610:intron 20.0%
!! TAGAAACATTGTTAATGAAT+TGG + chr7_2:81454378-81454397 Msa1081610:CDS 20.0%
!! AGTTTAAGAATAAACCAAAT+TGG + chr7_2:81453729-81453748 Msa1081610:intron 20.0%
!! GTTTAAGAATAAACCAAATT+GGG + chr7_2:81453730-81453749 Msa1081610:intron 20.0%
!! ACTTAAATTATTACATGTGT+TGG - chr7_2:81454020-81454039 None:intergenic 20.0%
!! ACATGTAATAATTTAAGTCA+CGG + chr7_2:81454022-81454041 Msa1081610:intron 20.0%
!! TACTAGTTAAATTAACATGT+TGG + chr7_2:81454074-81454093 Msa1081610:intron 20.0%
!! TAGAAACATTGTTAATGAAT+TGG + chr7_2:81454378-81454397 Msa1081610:CDS 20.0%
!!! ATTTTCATGACTGTTTTGTT+AGG + chr7_2:81453316-81453335 Msa1081610:CDS 25.0%
!!! TTTTCATGACTGTTTTGTTA+GGG + chr7_2:81453317-81453336 Msa1081610:CDS 25.0%
! CTAAAATTGTAAAGATCAAG+GGG - chr7_2:81453349-81453368 None:intergenic 25.0%
! GCTAAAATTGTAAAGATCAA+GGG - chr7_2:81453350-81453369 None:intergenic 25.0%
! AGCTAAAATTGTAAAGATCA+AGG - chr7_2:81453351-81453370 None:intergenic 25.0%
! TGCTAATGATAAATTTGGAA+TGG - chr7_2:81453520-81453539 None:intergenic 25.0%
! ATTCCAAATTTATCATTAGC+AGG + chr7_2:81453519-81453538 Msa1081610:CDS 25.0%
! AGAAGACATAAAAAAAGCTT+TGG + chr7_2:81453554-81453573 Msa1081610:CDS 25.0%
! CATGTTAATTTAACTAGTAC+TGG - chr7_2:81454073-81454092 None:intergenic 25.0%
!! TGTTGGCTATATGTATTTAT+AGG + chr7_2:81454091-81454110 Msa1081610:intron 25.0%
! TTCAAGAAATTTGCATAAGT+TGG - chr7_2:81454208-81454227 None:intergenic 25.0%
!!! ATTTTCATGACTGTTTTGTT+AGG + chr7_2:81453316-81453335 Msa1081610:CDS 25.0%
!!! TTTTCATGACTGTTTTGTTA+GGG + chr7_2:81453317-81453336 Msa1081610:CDS 25.0%
! CTAAAATTGTAAAGATCAAG+GGG - chr7_2:81453349-81453368 None:intergenic 25.0%
! GCTAAAATTGTAAAGATCAA+GGG - chr7_2:81453350-81453369 None:intergenic 25.0%
! AGCTAAAATTGTAAAGATCA+AGG - chr7_2:81453351-81453370 None:intergenic 25.0%
! TGCTAATGATAAATTTGGAA+TGG - chr7_2:81453520-81453539 None:intergenic 25.0%
! ATTCCAAATTTATCATTAGC+AGG + chr7_2:81453519-81453538 Msa1081610:CDS 25.0%
! AGAAGACATAAAAAAAGCTT+TGG + chr7_2:81453554-81453573 Msa1081610:CDS 25.0%
! CATGTTAATTTAACTAGTAC+TGG - chr7_2:81454073-81454092 None:intergenic 25.0%
!! TGTTGGCTATATGTATTTAT+AGG + chr7_2:81454091-81454110 Msa1081610:intron 25.0%
! TTCAAGAAATTTGCATAAGT+TGG - chr7_2:81454208-81454227 None:intergenic 25.0%
TCTTATAGAAATTCTTCCTC+AGG - chr7_2:81453203-81453222 None:intergenic 30.0%
! AAAATGCAGTCTTATCAACT+TGG - chr7_2:81453301-81453320 None:intergenic 30.0%
TACTAAGTGACATGCATATA+TGG + chr7_2:81453425-81453444 Msa1081610:intron 30.0%
AAGCCTGCTAATGATAAATT+TGG - chr7_2:81453525-81453544 None:intergenic 30.0%
! AGACATAAAAAAAGCTTTGG+AGG + chr7_2:81453557-81453576 Msa1081610:CDS 30.0%
AATAATTTAAGTCACGGACA+CGG + chr7_2:81454028-81454047 Msa1081610:intron 30.0%
TCAAATGTTGTTGAGCTATT+TGG - chr7_2:81454280-81454299 None:intergenic 30.0%
!! AACAATGTTTCTAGATTGCT+TGG - chr7_2:81454371-81454390 None:intergenic 30.0%
TCTTATAGAAATTCTTCCTC+AGG - chr7_2:81453203-81453222 None:intergenic 30.0%
! AAAATGCAGTCTTATCAACT+TGG - chr7_2:81453301-81453320 None:intergenic 30.0%
TACTAAGTGACATGCATATA+TGG + chr7_2:81453425-81453444 Msa1081610:intron 30.0%
AAGCCTGCTAATGATAAATT+TGG - chr7_2:81453525-81453544 None:intergenic 30.0%
! AGACATAAAAAAAGCTTTGG+AGG + chr7_2:81453557-81453576 Msa1081610:CDS 30.0%
AATAATTTAAGTCACGGACA+CGG + chr7_2:81454028-81454047 Msa1081610:intron 30.0%
TCAAATGTTGTTGAGCTATT+TGG - chr7_2:81454280-81454299 None:intergenic 30.0%
!! AACAATGTTTCTAGATTGCT+TGG - chr7_2:81454371-81454390 None:intergenic 30.0%
ATTCTTCCTTGTAGCTTCTA+TGG + chr7_2:81453140-81453159 Msa1081610:CDS 35.0%
! ATGGTGCTTTTCTGTTTCAT+TGG + chr7_2:81453159-81453178 Msa1081610:CDS 35.0%
! TGGTGCTTTTCTGTTTCATT+GGG + chr7_2:81453160-81453179 Msa1081610:CDS 35.0%
! TGTTTCATTGGGATTAGTGA+AGG + chr7_2:81453171-81453190 Msa1081610:CDS 35.0%
! ATGTGCTGATATACTCACAT+TGG + chr7_2:81453602-81453621 Msa1081610:CDS 35.0%
AGCTGTGTGATATTATGGAA+AGG - chr7_2:81453824-81453843 None:intergenic 35.0%
AAAGCTTACTCTTCATGACT+TGG + chr7_2:81453865-81453884 Msa1081610:CDS 35.0%
!! CATGACTTGGTTGTATTATC+AGG + chr7_2:81453878-81453897 Msa1081610:CDS 35.0%
TCTGTGTCTTGAAATGTGAT+TGG - chr7_2:81453977-81453996 None:intergenic 35.0%
ACATTTCAAGACACAGACAT+CGG + chr7_2:81453980-81453999 Msa1081610:intron 35.0%
! TTTATAGGAGCACACACAAT+TGG + chr7_2:81454106-81454125 Msa1081610:intron 35.0%
ATTGCAACTTATTCAGCAAC+AGG + chr7_2:81454137-81454156 Msa1081610:CDS 35.0%
! CTTTTCAACTTCACTGGAAA+AGG + chr7_2:81454160-81454179 Msa1081610:CDS 35.0%
! AGTTTTCTCAGTCAATGAAG+AGG + chr7_2:81454425-81454444 Msa1081610:CDS 35.0%
GTTCGAATGGAGAAATTAGA+AGG + chr7_2:81454473-81454492 Msa1081610:CDS 35.0%
ATTCTTCCTTGTAGCTTCTA+TGG + chr7_2:81453140-81453159 Msa1081610:CDS 35.0%
! ATGGTGCTTTTCTGTTTCAT+TGG + chr7_2:81453159-81453178 Msa1081610:CDS 35.0%
! TGGTGCTTTTCTGTTTCATT+GGG + chr7_2:81453160-81453179 Msa1081610:CDS 35.0%
! TGTTTCATTGGGATTAGTGA+AGG + chr7_2:81453171-81453190 Msa1081610:CDS 35.0%
! ATGTGCTGATATACTCACAT+TGG + chr7_2:81453602-81453621 Msa1081610:CDS 35.0%
AGCTGTGTGATATTATGGAA+AGG - chr7_2:81453824-81453843 None:intergenic 35.0%
AAAGCTTACTCTTCATGACT+TGG + chr7_2:81453865-81453884 Msa1081610:CDS 35.0%
!! CATGACTTGGTTGTATTATC+AGG + chr7_2:81453878-81453897 Msa1081610:CDS 35.0%
TCTGTGTCTTGAAATGTGAT+TGG - chr7_2:81453977-81453996 None:intergenic 35.0%
ACATTTCAAGACACAGACAT+CGG + chr7_2:81453980-81453999 Msa1081610:intron 35.0%
! TTTATAGGAGCACACACAAT+TGG + chr7_2:81454106-81454125 Msa1081610:intron 35.0%
ATTGCAACTTATTCAGCAAC+AGG + chr7_2:81454137-81454156 Msa1081610:CDS 35.0%
! CTTTTCAACTTCACTGGAAA+AGG + chr7_2:81454160-81454179 Msa1081610:CDS 35.0%
! AGTTTTCTCAGTCAATGAAG+AGG + chr7_2:81454425-81454444 Msa1081610:CDS 35.0%
GTTCGAATGGAGAAATTAGA+AGG + chr7_2:81454473-81454492 Msa1081610:CDS 35.0%
! AAAGCACCATAGAAGCTACA+AGG - chr7_2:81453149-81453168 None:intergenic 40.0%
! TTCATTGGGATTAGTGAAGG+AGG + chr7_2:81453174-81453193 Msa1081610:CDS 40.0%
TTAACAATCTCCTCAGCTTG+AGG - chr7_2:81453234-81453253 None:intergenic 40.0%
CCTTGAAGAGACATGTTGTA+GGG - chr7_2:81453265-81453284 None:intergenic 40.0%
TGCATATATGGTTGCGTTTC+AGG + chr7_2:81453437-81453456 Msa1081610:intron 40.0%
GCATATATGGTTGCGTTTCA+GGG + chr7_2:81453438-81453457 Msa1081610:intron 40.0%
CATATATGGTTGCGTTTCAG+GGG + chr7_2:81453439-81453458 Msa1081610:intron 40.0%
TCAGCACATGATACAATTCC+TGG - chr7_2:81453591-81453610 None:intergenic 40.0%
!! ACCAAATTGGGAAGTGCTTA+CGG + chr7_2:81453742-81453761 Msa1081610:CDS 40.0%
!! AGGTGCTGGAATATTGATCA+GGG - chr7_2:81453804-81453823 None:intergenic 40.0%
!! AAGGTGCTGGAATATTGATC+AGG - chr7_2:81453805-81453824 None:intergenic 40.0%
! GTGATATTATGGAAAGGTGC+TGG - chr7_2:81453818-81453837 None:intergenic 40.0%
GTCTGAGCTGTGTGATATTA+TGG - chr7_2:81453829-81453848 None:intergenic 40.0%
! AACAGGCTTTTCAACTTCAC+TGG + chr7_2:81454154-81454173 Msa1081610:CDS 40.0%
! GCATAAGTTGGATTCAGAGA+TGG - chr7_2:81454196-81454215 None:intergenic 40.0%
TTCTTGAAGACCAAATGCCA+AGG + chr7_2:81454220-81454239 Msa1081610:CDS 40.0%
TCCTGTCCTTCTACAAAACA+AGG + chr7_2:81454312-81454331 Msa1081610:CDS 40.0%
CCTGTCCTTCTACAAAACAA+GGG + chr7_2:81454313-81454332 Msa1081610:CDS 40.0%
!!! AGAGACCCTTGTTTTGTAGA+AGG - chr7_2:81454321-81454340 None:intergenic 40.0%
TTCTCAGTCAATGAAGAGGA+TGG + chr7_2:81454429-81454448 Msa1081610:CDS 40.0%
TCTCAGTCAATGAAGAGGAT+GGG + chr7_2:81454430-81454449 Msa1081610:CDS 40.0%
! AAAGCACCATAGAAGCTACA+AGG - chr7_2:81453149-81453168 None:intergenic 40.0%
! TTCATTGGGATTAGTGAAGG+AGG + chr7_2:81453174-81453193 Msa1081610:CDS 40.0%
TTAACAATCTCCTCAGCTTG+AGG - chr7_2:81453234-81453253 None:intergenic 40.0%
CCTTGAAGAGACATGTTGTA+GGG - chr7_2:81453265-81453284 None:intergenic 40.0%
TGCATATATGGTTGCGTTTC+AGG + chr7_2:81453437-81453456 Msa1081610:intron 40.0%
GCATATATGGTTGCGTTTCA+GGG + chr7_2:81453438-81453457 Msa1081610:intron 40.0%
CATATATGGTTGCGTTTCAG+GGG + chr7_2:81453439-81453458 Msa1081610:intron 40.0%
TCAGCACATGATACAATTCC+TGG - chr7_2:81453591-81453610 None:intergenic 40.0%
!! ACCAAATTGGGAAGTGCTTA+CGG + chr7_2:81453742-81453761 Msa1081610:CDS 40.0%
!! AGGTGCTGGAATATTGATCA+GGG - chr7_2:81453804-81453823 None:intergenic 40.0%
!! AAGGTGCTGGAATATTGATC+AGG - chr7_2:81453805-81453824 None:intergenic 40.0%
! GTGATATTATGGAAAGGTGC+TGG - chr7_2:81453818-81453837 None:intergenic 40.0%
GTCTGAGCTGTGTGATATTA+TGG - chr7_2:81453829-81453848 None:intergenic 40.0%
! AACAGGCTTTTCAACTTCAC+TGG + chr7_2:81454154-81454173 Msa1081610:CDS 40.0%
! GCATAAGTTGGATTCAGAGA+TGG - chr7_2:81454196-81454215 None:intergenic 40.0%
TTCTTGAAGACCAAATGCCA+AGG + chr7_2:81454220-81454239 Msa1081610:CDS 40.0%
TCCTGTCCTTCTACAAAACA+AGG + chr7_2:81454312-81454331 Msa1081610:CDS 40.0%
CCTGTCCTTCTACAAAACAA+GGG + chr7_2:81454313-81454332 Msa1081610:CDS 40.0%
!!! AGAGACCCTTGTTTTGTAGA+AGG - chr7_2:81454321-81454340 None:intergenic 40.0%
TTCTCAGTCAATGAAGAGGA+TGG + chr7_2:81454429-81454448 Msa1081610:CDS 40.0%
TCTCAGTCAATGAAGAGGAT+GGG + chr7_2:81454430-81454449 Msa1081610:CDS 40.0%
CCCTACAACATGTCTCTTCA+AGG + chr7_2:81453262-81453281 Msa1081610:CDS 45.0%
GCCTTGAAGAGACATGTTGT+AGG - chr7_2:81453266-81453285 None:intergenic 45.0%
! TGCAGTCTTATCAACTTGGC+TGG - chr7_2:81453297-81453316 None:intergenic 45.0%
!! GCTTTGGAGGAAAAATGTCC+AGG + chr7_2:81453570-81453589 Msa1081610:CDS 45.0%
!! CCAAATTGGGAAGTGCTTAC+GGG + chr7_2:81453743-81453762 Msa1081610:CDS 45.0%
ATCCATCTCTACTGTTGTGG+TGG - chr7_2:81454257-81454276 None:intergenic 45.0%
TGGATCCATCTCTACTGTTG+TGG - chr7_2:81454260-81454279 None:intergenic 45.0%
!!! CCCTTGTTTTGTAGAAGGAC+AGG - chr7_2:81454316-81454335 None:intergenic 45.0%
TTTCTCCATTCGAACCAGTG+AGG - chr7_2:81454468-81454487 None:intergenic 45.0%
CCCTACAACATGTCTCTTCA+AGG + chr7_2:81453262-81453281 Msa1081610:CDS 45.0%
GCCTTGAAGAGACATGTTGT+AGG - chr7_2:81453266-81453285 None:intergenic 45.0%
! TGCAGTCTTATCAACTTGGC+TGG - chr7_2:81453297-81453316 None:intergenic 45.0%
!! GCTTTGGAGGAAAAATGTCC+AGG + chr7_2:81453570-81453589 Msa1081610:CDS 45.0%
!! CCAAATTGGGAAGTGCTTAC+GGG + chr7_2:81453743-81453762 Msa1081610:CDS 45.0%
ATCCATCTCTACTGTTGTGG+TGG - chr7_2:81454257-81454276 None:intergenic 45.0%
TGGATCCATCTCTACTGTTG+TGG - chr7_2:81454260-81454279 None:intergenic 45.0%
!!! CCCTTGTTTTGTAGAAGGAC+AGG - chr7_2:81454316-81454335 None:intergenic 45.0%
TTTCTCCATTCGAACCAGTG+AGG - chr7_2:81454468-81454487 None:intergenic 45.0%
GAAGTCATGTCCTCAAGCTG+AGG + chr7_2:81453221-81453240 Msa1081610:CDS 50.0%
!!! GTGTGACGCATCGGTTTTGT+TGG + chr7_2:81453461-81453480 Msa1081610:CDS 50.0%
CCCGTAAGCACTTCCCAATT+TGG - chr7_2:81453746-81453765 None:intergenic 50.0%
GTGCTTACGGGTAGAAGAGA+TGG + chr7_2:81453755-81453774 Msa1081610:CDS 50.0%
GGAGCACACACAATTGGAGT+AGG + chr7_2:81454112-81454131 Msa1081610:intron 50.0%
GTCACTTAGGCCTTGGCATT+TGG - chr7_2:81454233-81454252 None:intergenic 50.0%
!! CTGTTGTGGTGGTGTCACTT+AGG - chr7_2:81454246-81454265 None:intergenic 50.0%
CACCACCACAACAGTAGAGA+TGG + chr7_2:81454252-81454271 Msa1081610:CDS 50.0%
GAAGAGGATGGGAGCTATTG+AGG + chr7_2:81454441-81454460 Msa1081610:CDS 50.0%
GAAGTCATGTCCTCAAGCTG+AGG + chr7_2:81453221-81453240 Msa1081610:CDS 50.0%
!!! GTGTGACGCATCGGTTTTGT+TGG + chr7_2:81453461-81453480 Msa1081610:CDS 50.0%
CCCGTAAGCACTTCCCAATT+TGG - chr7_2:81453746-81453765 None:intergenic 50.0%
GTGCTTACGGGTAGAAGAGA+TGG + chr7_2:81453755-81453774 Msa1081610:CDS 50.0%
GGAGCACACACAATTGGAGT+AGG + chr7_2:81454112-81454131 Msa1081610:intron 50.0%
GTCACTTAGGCCTTGGCATT+TGG - chr7_2:81454233-81454252 None:intergenic 50.0%
!! CTGTTGTGGTGGTGTCACTT+AGG - chr7_2:81454246-81454265 None:intergenic 50.0%
CACCACCACAACAGTAGAGA+TGG + chr7_2:81454252-81454271 Msa1081610:CDS 50.0%
GAAGAGGATGGGAGCTATTG+AGG + chr7_2:81454441-81454460 Msa1081610:CDS 50.0%
TTAGTGAAGGAGGCAGCCTG+AGG + chr7_2:81453184-81453203 Msa1081610:CDS 55.0%
ATCAACTTGGCTGGCAGCTC+AGG - chr7_2:81453288-81453307 None:intergenic 55.0%
! GTTTCAGGGGTGTGACGCAT+CGG + chr7_2:81453452-81453471 Msa1081610:intron 55.0%
!! GTTTTGTTGGAGTCCGCAGC+TGG + chr7_2:81453474-81453493 Msa1081610:CDS 55.0%
AGCTGGTAACACTGCGGAGA+AGG + chr7_2:81453491-81453510 Msa1081610:CDS 55.0%
!! TGGTGGTGTCACTTAGGCCT+TGG - chr7_2:81454240-81454259 None:intergenic 55.0%
GGAGCTATTGAGGTCCTCAC+TGG + chr7_2:81454451-81454470 Msa1081610:CDS 55.0%
!! GAGGTCCTCACTGGTTCGAA+TGG + chr7_2:81454460-81454479 Msa1081610:CDS 55.0%
TTAGTGAAGGAGGCAGCCTG+AGG + chr7_2:81453184-81453203 Msa1081610:CDS 55.0%
ATCAACTTGGCTGGCAGCTC+AGG - chr7_2:81453288-81453307 None:intergenic 55.0%
! GTTTCAGGGGTGTGACGCAT+CGG + chr7_2:81453452-81453471 Msa1081610:intron 55.0%
!! GTTTTGTTGGAGTCCGCAGC+TGG + chr7_2:81453474-81453493 Msa1081610:CDS 55.0%
AGCTGGTAACACTGCGGAGA+AGG + chr7_2:81453491-81453510 Msa1081610:CDS 55.0%
!! TGGTGGTGTCACTTAGGCCT+TGG - chr7_2:81454240-81454259 None:intergenic 55.0%
GGAGCTATTGAGGTCCTCAC+TGG + chr7_2:81454451-81454470 Msa1081610:CDS 55.0%
!! GAGGTCCTCACTGGTTCGAA+TGG + chr7_2:81454460-81454479 Msa1081610:CDS 55.0%
GTCCGCAGCTGGTAACACTG+CGG + chr7_2:81453485-81453504 Msa1081610:CDS 60.0%
CTCCGCAGTGTTACCAGCTG+CGG - chr7_2:81453490-81453509 None:intergenic 60.0%
GTCCGCAGCTGGTAACACTG+CGG + chr7_2:81453485-81453504 Msa1081610:CDS 60.0%
CTCCGCAGTGTTACCAGCTG+CGG - chr7_2:81453490-81453509 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 81453129 81454516 81453129 ID=Msa1081610;Name=Msa1081610
chr7_2 mRNA 81453129 81454516 81453129 ID=Msa1081610-mRNA-1;Parent=Msa1081610;Name=Msa1081610-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|4|0|320
chr7_2 exon 81453129 81453338 81453129 ID=Msa1081610-mRNA-1:exon:20849;Parent=Msa1081610-mRNA-1
chr7_2 exon 81453459 81453638 81453459 ID=Msa1081610-mRNA-1:exon:20850;Parent=Msa1081610-mRNA-1
chr7_2 exon 81453731 81453899 81453731 ID=Msa1081610-mRNA-1:exon:20851;Parent=Msa1081610-mRNA-1
chr7_2 exon 81454113 81454516 81454113 ID=Msa1081610-mRNA-1:exon:20852;Parent=Msa1081610-mRNA-1
chr7_2 CDS 81453129 81453338 81453129 ID=Msa1081610-mRNA-1:cds;Parent=Msa1081610-mRNA-1
chr7_2 CDS 81453459 81453638 81453459 ID=Msa1081610-mRNA-1:cds;Parent=Msa1081610-mRNA-1
chr7_2 CDS 81453731 81453899 81453731 ID=Msa1081610-mRNA-1:cds;Parent=Msa1081610-mRNA-1
chr7_2 CDS 81454113 81454516 81454113 ID=Msa1081610-mRNA-1:cds;Parent=Msa1081610-mRNA-1
Gene Sequence

>Msa1081610

ATGAAGATGAAATTCTTCCTTGTAGCTTCTATGGTGCTTTTCTGTTTCATTGGGATTAGTGAAGGAGGCAGCCTGAGGAAGAATTTCTATAAGAAGTCATGTCCTCAAGCTGAGGAGATTGTTAAGAACGTAACCCTACAACATGTCTCTTCAAGGCCTGAGCTGCCAGCCAAGTTGATAAGACTGCATTTTCATGACTGTTTTGTTAGGGGGTGTGACGCATCGGTTTTGTTGGAGTCCGCAGCTGGTAACACTGCGGAGAAGGATGCCATTCCAAATTTATCATTAGCAGGCTTTGATGTGATAGAAGACATAAAAAAAGCTTTGGAGGAAAAATGTCCAGGAATTGTATCATGTGCTGATATACTCACATTGGCTACTAGAGATGCTTTTAAGAATAAACCAAATTGGGAAGTGCTTACGGGTAGAAGAGATGGTACTGTGTCTAGAAGCATTGAAGCCCTGATCAATATTCCAGCACCTTTCCATAATATCACACAGCTCAGACAAATCTTTGCTAGTAAAAAGCTTACTCTTCATGACTTGGTTGTATTATCAGGAGCACACACAATTGGAGTAGGACATTGCAACTTATTCAGCAACAGGCTTTTCAACTTCACTGGAAAAGGTGATCAAGATCCATCTCTGAATCCAACTTATGCAAATTTCTTGAAGACCAAATGCCAAGGCCTAAGTGACACCACCACAACAGTAGAGATGGATCCAAATAGCTCAACAACATTTGACAATGACTATTATCCTGTCCTTCTACAAAACAAGGGTCTCTTCACATCAGACGCTGCTCTTCTAACAACCAAGCAATCTAGAAACATTGTTAATGAATTGGTTTCACAAAATAAATTCTTCACTGAGTTTTCTCAGTCAATGAAGAGGATGGGAGCTATTGAGGTCCTCACTGGTTCGAATGGAGAAATTAGAAGGAAGTGCTCTGTTGTTAATTAA

Protein sequence

>Msa1081610

MKMKFFLVASMVLFCFIGISEGGSLRKNFYKKSCPQAEEIVKNVTLQHVSSRPELPAKLIRLHFHDCFVRGCDASVLLESAAGNTAEKDAIPNLSLAGFDVIEDIKKALEEKCPGIVSCADILTLATRDAFKNKPNWEVLTGRRDGTVSRSIEALINIPAPFHNITQLRQIFASKKLTLHDLVVLSGAHTIGVGHCNLFSNRLFNFTGKGDQDPSLNPTYANFLKTKCQGLSDTTTTVEMDPNSSTTFDNDYYPVLLQNKGLFTSDAALLTTKQSRNIVNELVSQNKFFTEFSQSMKRMGAIEVLTGSNGEIRRKCSVVN*