Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082190 | sp|Q9FNY2|DPB_ARATH | 63.406 | 276 | 83 | 5 | 1 | 264 | 27 | 296 | 6.82e-107 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082190 | A0A1S2YJ92 | 71.554 | 341 | 63 | 5 | 1 | 312 | 1 | 336 | 1.08e-157 | 457 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1082190 | TF | E2F-DP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0105070 | Msa1082190 | 0.810791 | 9.669880e-51 | -8.615850e-47 |
| Msa0762360 | Msa1082190 | 0.807507 | 4.886167e-50 | -8.615850e-47 |
| Msa1082190 | Msa1403480 | 0.806699 | 7.244694e-50 | -8.615850e-47 |
| Msa1082190 | Msa1439320 | 0.800213 | 1.601386e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082190 | MtrunA17_Chr4g0039751 | 69.591 | 342 | 69 | 6 | 1 | 312 | 1 | 337 | 3.06e-156 | 444 |
| Msa1082190 | MtrunA17_Chr4g0039741 | 65.635 | 323 | 91 | 6 | 2 | 312 | 21 | 335 | 4.68e-139 | 400 |
| Msa1082190 | MtrunA17_Chr7g0269641 | 86.010 | 193 | 22 | 3 | 1 | 189 | 1 | 192 | 3.80e-109 | 318 |
| Msa1082190 | MtrunA17_Chr7g0269651 | 93.548 | 124 | 8 | 0 | 234 | 357 | 1 | 124 | 3.13e-73 | 246 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082190 | AT5G03415.1 | 63.406 | 276 | 83 | 5 | 1 | 264 | 27 | 296 | 6.93e-108 | 323 |
| Msa1082190 | AT5G03415.2 | 61.594 | 276 | 82 | 6 | 1 | 264 | 27 | 290 | 2.10e-102 | 308 |
| Msa1082190 | AT5G02470.3 | 40.435 | 230 | 108 | 8 | 40 | 259 | 32 | 242 | 1.11e-47 | 164 |
| Msa1082190 | AT5G02470.1 | 40.435 | 230 | 108 | 8 | 40 | 259 | 32 | 242 | 1.11e-47 | 164 |
| Msa1082190 | AT5G02470.2 | 40.435 | 230 | 108 | 8 | 40 | 259 | 32 | 242 | 1.11e-47 | 164 |
Find 93 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTGTAGCTTATTGATTT+AGG | 0.131004 | 7_2:+82176100 | Msa1082190:five_prime_UTR |
| CAGGCATCACCTCCGCTTTC+TGG | 0.140961 | 7_2:+82180073 | Msa1082190:CDS |
| TCAATTTCCACATGACATTT+TGG | 0.179498 | 7_2:-82180925 | None:intergenic |
| CGATTTCGACGTCGTTAATT+AGG | 0.180687 | 7_2:-82181548 | None:intergenic |
| AATGAAAAGGACAATGATTT+TGG | 0.189333 | 7_2:-82176162 | None:intergenic |
| AAGTCACTTCTGATTGCTTT+AGG | 0.210740 | 7_2:-82181491 | None:intergenic |
| AAAACCTTTCATGCTAATTT+GGG | 0.213087 | 7_2:-82176993 | None:intergenic |
| GTCAGGCTTGCATCAGTTGC+AGG | 0.260541 | 7_2:+82180015 | Msa1082190:CDS |
| TATTATTTCCAAGGATAAAA+AGG | 0.267147 | 7_2:+82178517 | Msa1082190:CDS |
| AACTGTAGCTTATTGATTTA+GGG | 0.280597 | 7_2:+82176101 | Msa1082190:five_prime_UTR |
| ATCTGATTCAAGAGCAGTTT+TGG | 0.287261 | 7_2:-82176222 | None:intergenic |
| AGTTGAGATCCAATTGTTAT+AGG | 0.293246 | 7_2:-82181515 | None:intergenic |
| TATTATTGCATCAAGTTTGT+AGG | 0.312560 | 7_2:+82178924 | Msa1082190:intron |
| CAGTTTCAAGCGTGTCAATT+AGG | 0.323437 | 7_2:+82180047 | Msa1082190:CDS |
| CTTGTTCCTCAAGCTCCTTT+AGG | 0.331825 | 7_2:-82178751 | None:intergenic |
| GTTGAGATCCAATTGTTATA+GGG | 0.338557 | 7_2:-82181514 | None:intergenic |
| AGTCACTTCTGATTGCTTTA+GGG | 0.360702 | 7_2:-82181490 | None:intergenic |
| GTTGGAGAAGGTAGAAAGTA+AGG | 0.363432 | 7_2:+82177109 | Msa1082190:CDS |
| TCCGCTTTCTGGAATACTTA+AGG | 0.378685 | 7_2:+82180084 | Msa1082190:CDS |
| GTCGGCTTGCTCCGGCTAGA+TGG | 0.379241 | 7_2:-82176353 | None:intergenic |
| TTGTTGCGAAAGTCGATAGA+TGG | 0.385930 | 7_2:+82176273 | Msa1082190:five_prime_UTR |
| GGGGAAGGTTCTAGCTTGTC+AGG | 0.408012 | 7_2:+82179998 | Msa1082190:CDS |
| TCAAAATAGTCCTAAACCTT+AGG | 0.426376 | 7_2:+82176062 | Msa1082190:five_prime_UTR |
| TACGTTTCAACTGCTGCAAC+TGG | 0.426865 | 7_2:+82180997 | Msa1082190:CDS |
| TGTTTGTTAGGAAAGCTAAC+TGG | 0.430033 | 7_2:+82180775 | Msa1082190:intron |
| AGTGACTTCCCTATAACAAT+TGG | 0.439215 | 7_2:+82181506 | Msa1082190:CDS |
| AAAGATAAATCTCCGCTTGA+AGG | 0.440338 | 7_2:-82178996 | None:intergenic |
| GAGAACATTCAGAACATCAT+AGG | 0.447978 | 7_2:-82178483 | None:intergenic |
| AATGAGCAATTATATAGATC+AGG | 0.460541 | 7_2:+82178969 | Msa1082190:CDS |
| AAGCGTGTCAATTAGGCCTC+AGG | 0.469004 | 7_2:+82180054 | Msa1082190:CDS |
| GGGGACAAAACACTATTCAT+TGG | 0.471513 | 7_2:-82178311 | None:intergenic |
| CTAAAAGTTAAGTGTGGGGT+TGG | 0.482389 | 7_2:+82175941 | None:intergenic |
| GCAAACTAAAAGTTAAGTGT+GGG | 0.499822 | 7_2:+82175936 | None:intergenic |
| GAAAGTCGATAGATGGAAGA+TGG | 0.500686 | 7_2:+82176280 | Msa1082190:exon |
| GCAGCGGCTGTCTGCGTCGT+CGG | 0.501224 | 7_2:-82176371 | None:intergenic |
| TGTACCTGAACCAGAACAAA+AGG | 0.501925 | 7_2:-82179020 | None:intergenic |
| CTATGGTGCACAAAATGAAA+AGG | 0.506225 | 7_2:-82176175 | None:intergenic |
| GGCAATGGATATTATTTCCA+AGG | 0.507516 | 7_2:+82178508 | Msa1082190:CDS |
| TCTGCGTCGTCGGCTTGCTC+CGG | 0.510423 | 7_2:-82176361 | None:intergenic |
| ATTCAACAGATCGAATGTCT+AGG | 0.511456 | 7_2:+82178695 | Msa1082190:intron |
| TGCAACTGTTGAACTTGAAG+TGG | 0.513525 | 7_2:+82179566 | Msa1082190:CDS |
| AGGAGCTATTGAGAAGCTAA+AGG | 0.520149 | 7_2:+82178556 | Msa1082190:CDS |
| TTCAACAGATCGAATGTCTA+GGG | 0.521141 | 7_2:+82178696 | Msa1082190:intron |
| CATCATCATGTATGTCAAGA+TGG | 0.522280 | 7_2:-82176406 | None:intergenic |
| GAATGACACACAGTTTCCCT+TGG | 0.532011 | 7_2:+82180963 | Msa1082190:CDS |
| ACTTACCATTGCTGTAATGA+TGG | 0.533611 | 7_2:-82180810 | None:intergenic |
| CGCAAACTAAAAGTTAAGTG+TGG | 0.533862 | 7_2:+82175935 | None:intergenic |
| ACACTCAATGTTACGGAAGG+AGG | 0.535766 | 7_2:+82179977 | Msa1082190:CDS |
| TATTGCTACACTCAATGTTA+CGG | 0.535816 | 7_2:+82179970 | Msa1082190:CDS |
| AAGCAAAGTATCCTACCTAA+AGG | 0.541642 | 7_2:+82178736 | Msa1082190:CDS |
| AAGGAAATACAATACAATCA+AGG | 0.544952 | 7_2:+82178536 | Msa1082190:CDS |
| TTTCGACGTCGTTAATTAGG+AGG | 0.549597 | 7_2:-82181545 | None:intergenic |
| CACTCAATGTTACGGAAGGA+GGG | 0.556476 | 7_2:+82179978 | Msa1082190:CDS |
| ATCCTACCTAAAGGAGCTTG+AGG | 0.557921 | 7_2:+82178745 | Msa1082190:CDS |
| TTGGAGAAGGTAGAAAGTAA+GGG | 0.559901 | 7_2:+82177110 | Msa1082190:CDS |
| AAAGTCGATAGATGGAAGAT+GGG | 0.561763 | 7_2:+82176281 | Msa1082190:exon |
| ATTGCTCATTTCGTTGAACA+AGG | 0.562679 | 7_2:-82178956 | None:intergenic |
| ACCTTAAGTATTCCAGAAAG+CGG | 0.563806 | 7_2:-82180085 | None:intergenic |
| AAACCTTTCATGCTAATTTG+GGG | 0.565405 | 7_2:-82176992 | None:intergenic |
| AATCATGTGTAGATGAAAGC+AGG | 0.569304 | 7_2:+82176318 | Msa1082190:CDS |
| GAACATCATAGGCCCTTCGA+CGG | 0.570623 | 7_2:-82178472 | None:intergenic |
| TGATGTTCTGAATGTTCTCA+TGG | 0.572407 | 7_2:+82178487 | Msa1082190:CDS |
| CGAAGGAAGAAATAATGCTA+TGG | 0.580934 | 7_2:-82176192 | None:intergenic |
| GACATACATGATGATGATGC+AGG | 0.583166 | 7_2:+82176413 | Msa1082190:CDS |
| AACCTTTCATGCTAATTTGG+GGG | 0.587021 | 7_2:-82176991 | None:intergenic |
| TTCAGATCCAAAATGTCATG+TGG | 0.587452 | 7_2:+82180918 | Msa1082190:intron |
| CTACTATGTGCTCAAAGCAA+TGG | 0.590968 | 7_2:+82179922 | Msa1082190:CDS |
| GATGATGATGCAGGATCACA+AGG | 0.593414 | 7_2:+82176422 | Msa1082190:CDS |
| TACAACCATCATTACAGCAA+TGG | 0.598226 | 7_2:+82180805 | Msa1082190:CDS |
| GTAGATGAAAGCAGGAGTGC+TGG | 0.600296 | 7_2:+82176326 | Msa1082190:CDS |
| GTTGTATGCAGTGTTGGAGA+AGG | 0.602504 | 7_2:+82177097 | Msa1082190:intron |
| AATGTTACGGAAGGAGGGGA+AGG | 0.604293 | 7_2:+82179983 | Msa1082190:CDS |
| TCTGAATGTTCTCATGGCAA+TGG | 0.604838 | 7_2:+82178493 | Msa1082190:CDS |
| AACGTATTCAGAATTCTCCA+AGG | 0.609257 | 7_2:-82180980 | None:intergenic |
| ACCTTAGGAAAAGTTAGAAG+AGG | 0.610254 | 7_2:+82176077 | Msa1082190:five_prime_UTR |
| TTCCTCAAGCTCCTTTAGGT+AGG | 0.612657 | 7_2:-82178747 | None:intergenic |
| ATGGTTTAATTTGAGAGCAG+CGG | 0.613032 | 7_2:-82176387 | None:intergenic |
| CTAGGTGGCAGATGAACTTG+TGG | 0.615812 | 7_2:+82178274 | Msa1082190:intron |
| ACTCAATGTTACGGAAGGAG+GGG | 0.616617 | 7_2:+82179979 | Msa1082190:CDS |
| GGGAAGAACAACTTTCAATG+AGG | 0.618421 | 7_2:+82177130 | Msa1082190:CDS |
| GGAAGATGGGAACGCGACTG+CGG | 0.633565 | 7_2:+82176294 | Msa1082190:exon |
| ATTGACACGCTTGAAACTGA+AGG | 0.637612 | 7_2:-82180043 | None:intergenic |
| AGATCAGGAAATCCTTCAAG+CGG | 0.637885 | 7_2:+82178984 | Msa1082190:CDS |
| GCTACACTCAATGTTACGGA+AGG | 0.641637 | 7_2:+82179974 | Msa1082190:CDS |
| GGAAATTGATAGTCTTGCTA+AGG | 0.641726 | 7_2:+82180939 | Msa1082190:CDS |
| ACGTATTCAGAATTCTCCAA+GGG | 0.647605 | 7_2:-82180979 | None:intergenic |
| TTAAGTAACTCGATATAGTG+AGG | 0.647838 | 7_2:+82176029 | Msa1082190:five_prime_UTR |
| CAAACTAAAAGTTAAGTGTG+GGG | 0.655209 | 7_2:+82175937 | None:intergenic |
| TCAAGTTCAACAGTTGCATG+AGG | 0.655545 | 7_2:-82179561 | None:intergenic |
| GAAAGCGGAGGTGATGCCTG+AGG | 0.658645 | 7_2:-82180070 | None:intergenic |
| GACACGCTTGAAACTGAAGG+AGG | 0.686824 | 7_2:-82180040 | None:intergenic |
| TTAAGTATTCCAGAAAGCGG+AGG | 0.697488 | 7_2:-82180082 | None:intergenic |
| AGTGTAGCAATATCTCTCCG+AGG | 0.743133 | 7_2:-82179959 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | + | chr7_2:82177239-82177258 | Msa1082190:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr7_2:82177240-82177259 | Msa1082190:intron | 0.0% |
| !!! | AAATTTTGAATGATAAAAAA+AGG | - | chr7_2:82176255-82176274 | None:intergenic | 10.0% |
| !! | AGTACAATATTATTAATATT+TGG | - | chr7_2:82176662-82176681 | None:intergenic | 10.0% |
| !!! | AAACTTTTTTATAAAATGAA+TGG | - | chr7_2:82177792-82177811 | None:intergenic | 10.0% |
| !!! | ATATAATTTTTTCTTGTTTA+GGG | + | chr7_2:82180144-82180163 | Msa1082190:intron | 10.0% |
| !!! | TTTATTGCTATTAAACTTAT+GGG | + | chr7_2:82176513-82176532 | Msa1082190:intron | 15.0% |
| !! | TTGATGTATGTTAATTAATT+TGG | - | chr7_2:82177372-82177391 | None:intergenic | 15.0% |
| !! | TTGGTGTATATTAATTAATT+TGG | + | chr7_2:82177970-82177989 | Msa1082190:intron | 15.0% |
| !!! | ATTCATTTTATTTAATCCAA+AGG | - | chr7_2:82178009-82178028 | None:intergenic | 15.0% |
| !! | TTTGGATTAAATAAAATGAA+TGG | + | chr7_2:82178008-82178027 | Msa1082190:intron | 15.0% |
| !! | TATATATATATATATGAGTC+AGG | - | chr7_2:82178081-82178100 | None:intergenic | 15.0% |
| !! | AATAATAAGAATTATGAAAG+AGG | - | chr7_2:82178206-82178225 | None:intergenic | 15.0% |
| !!! | ATGTGTTATTTTTATATTCT+AGG | + | chr7_2:82178256-82178275 | Msa1082190:intron | 15.0% |
| !!! | GATATAATTTTTTCTTGTTT+AGG | + | chr7_2:82180143-82180162 | Msa1082190:intron | 15.0% |
| !! | ATCTAATAAATATGTTTGTT+AGG | + | chr7_2:82180763-82180782 | Msa1082190:intron | 15.0% |
| !! | AAGTAACAAATACATTTAAT+GGG | - | chr7_2:82181276-82181295 | None:intergenic | 15.0% |
| !! | AAGAAAAAAAATAGAGATTA+TGG | - | chr7_2:82181403-82181422 | None:intergenic | 15.0% |
| !!! | GTTTATTGCTATTAAACTTA+TGG | + | chr7_2:82176512-82176531 | Msa1082190:intron | 20.0% |
| !! | TTATTCAGTTACTTATTTCA+GGG | + | chr7_2:82176564-82176583 | Msa1082190:intron | 20.0% |
| !! | ATAAGTTCTTAATAAGTCAA+CGG | + | chr7_2:82176712-82176731 | Msa1082190:intron | 20.0% |
| !! | AAAAATCAAAGAAAGACTTT+AGG | - | chr7_2:82176860-82176879 | None:intergenic | 20.0% |
| !! | TATATATATATATATGGGTC+AGG | + | chr7_2:82177261-82177280 | Msa1082190:intron | 20.0% |
| !! | TTTGGATTAAATGAAATGAA+TGG | - | chr7_2:82177334-82177353 | None:intergenic | 20.0% |
| !! | ATTCATTTCATTTAATCCAA+AGG | + | chr7_2:82177333-82177352 | Msa1082190:intron | 20.0% |
| !! | GTTAGATATGTTTCTTAATT+AGG | - | chr7_2:82177406-82177425 | None:intergenic | 20.0% |
| !! | AAATTAGGGGAAAATAAAAA+GGG | - | chr7_2:82177479-82177498 | None:intergenic | 20.0% |
| !! | AAAATTAGGGGAAAATAAAA+AGG | - | chr7_2:82177480-82177499 | None:intergenic | 20.0% |
| !!! | ATAGGTCTAATTTTTTTTAG+AGG | - | chr7_2:82177595-82177614 | None:intergenic | 20.0% |
| !! | TCAGAGAAAATTTCTAAATT+TGG | + | chr7_2:82177842-82177861 | Msa1082190:intron | 20.0% |
| !! | CAGAGAAAATTTCTAAATTT+GGG | + | chr7_2:82177843-82177862 | Msa1082190:intron | 20.0% |
| !! | AGAGAAAATTTCTAAATTTG+GGG | + | chr7_2:82177844-82177863 | Msa1082190:intron | 20.0% |
| !! | AAAAGAGGAACAAAAAAATT+TGG | + | chr7_2:82177873-82177892 | Msa1082190:intron | 20.0% |
| !! | AAAGAGGAACAAAAAAATTT+GGG | + | chr7_2:82177874-82177893 | Msa1082190:intron | 20.0% |
| !! | AAAATTTGGGGAAATAAAAA+TGG | + | chr7_2:82177887-82177906 | Msa1082190:intron | 20.0% |
| !! | GATAGATATGTTTCTTAATT+AGG | + | chr7_2:82177934-82177953 | Msa1082190:intron | 20.0% |
| !!! | CTTCAACTAATTTTTTATTC+AGG | + | chr7_2:82178113-82178132 | Msa1082190:intron | 20.0% |
| !! | TCAAAGTCAAGAAATATATT+AGG | - | chr7_2:82178237-82178256 | None:intergenic | 20.0% |
| !!! | TGTTATTTTTATATTCTAGG+TGG | + | chr7_2:82178259-82178278 | Msa1082190:intron | 20.0% |
| !!! | AATTTTGAAACTGTTTGTAA+AGG | - | chr7_2:82178353-82178372 | None:intergenic | 20.0% |
| !!! | TACTGTAGATTTACTTTTTT+GGG | + | chr7_2:82178407-82178426 | Msa1082190:intron | 20.0% |
| !! | TATTATTTCCAAGGATAAAA+AGG | + | chr7_2:82178517-82178536 | Msa1082190:CDS | 20.0% |
| !! | TTAATCCTAAAATACAATCA+AGG | + | chr7_2:82178653-82178672 | Msa1082190:intron | 20.0% |
| !! | TGAATAAAACTGAGTTAAAA+TGG | - | chr7_2:82178680-82178699 | None:intergenic | 20.0% |
| !! | CACTCTAATAGATTTAATAT+GGG | + | chr7_2:82178785-82178804 | Msa1082190:intron | 20.0% |
| !! | ACTCTAATAGATTTAATATG+GGG | + | chr7_2:82178786-82178805 | Msa1082190:intron | 20.0% |
| !!! | TTCTGAAAAAATAGCAAAAA+AGG | - | chr7_2:82179062-82179081 | None:intergenic | 20.0% |
| !! | GTGTGATAATTAGATTATAT+TGG | + | chr7_2:82179118-82179137 | Msa1082190:intron | 20.0% |
| !! | AAAACATATGCTTAATTAGT+TGG | + | chr7_2:82179155-82179174 | Msa1082190:intron | 20.0% |
| !! | AGAGGAAAAAAAATATTTCT+AGG | - | chr7_2:82179245-82179264 | None:intergenic | 20.0% |
| !!! | ATATTTTTTTTCCTCTTTTG+TGG | + | chr7_2:82179249-82179268 | Msa1082190:intron | 20.0% |
| !! | ATTGAGCTTATATAATCTAA+AGG | - | chr7_2:82179380-82179399 | None:intergenic | 20.0% |
| !!! | TTGTTCATTTTGATTTCAAT+AGG | + | chr7_2:82179619-82179638 | Msa1082190:CDS | 20.0% |
| !! | AAAAGTCATAGCAAAATATA+TGG | - | chr7_2:82180231-82180250 | None:intergenic | 20.0% |
| !!! | GAAATTAATCCTATTTTTGT+TGG | - | chr7_2:82180288-82180307 | None:intergenic | 20.0% |
| !! | AATAGGATTAATTTCAGAAT+TGG | + | chr7_2:82180293-82180312 | Msa1082190:intron | 20.0% |
| !! | TTGTCTTGTATTATTTACTA+CGG | + | chr7_2:82180335-82180354 | Msa1082190:intron | 20.0% |
| !! | ATGACATTCAAAAGAAAATT+GGG | - | chr7_2:82180409-82180428 | None:intergenic | 20.0% |
| !!! | ATTTACCTGTTATTTCTATA+GGG | + | chr7_2:82180443-82180462 | Msa1082190:intron | 20.0% |
| !!! | TTTGATTTGATAAAGAGTAA+TGG | - | chr7_2:82181040-82181059 | None:intergenic | 20.0% |
| !! | TATCTTAATATCTAATCCTA+AGG | + | chr7_2:82181066-82181085 | Msa1082190:intron | 20.0% |
| !! | TCTAATAAGAACTTAATGAA+GGG | - | chr7_2:82181168-82181187 | None:intergenic | 20.0% |
| !! | ATCTAATAAGAACTTAATGA+AGG | - | chr7_2:82181169-82181188 | None:intergenic | 20.0% |
| !! | ATACATTTAATGGGAAATAT+GGG | - | chr7_2:82181267-82181286 | None:intergenic | 20.0% |
| !! | AATACATTTAATGGGAAATA+TGG | - | chr7_2:82181268-82181287 | None:intergenic | 20.0% |
| !! | GAAGTAACAAATACATTTAA+TGG | - | chr7_2:82181277-82181296 | None:intergenic | 20.0% |
| !! | AAAAAAAATAGAGATTATGG+AGG | - | chr7_2:82181400-82181419 | None:intergenic | 20.0% |
| !!! | CATGAACTTAGTTTTCATAT+AGG | - | chr7_2:82176007-82176026 | None:intergenic | 25.0% |
| !!! | AAACTGTAGCTTATTGATTT+AGG | + | chr7_2:82176100-82176119 | Msa1082190:five_prime_UTR | 25.0% |
| !!! | AACTGTAGCTTATTGATTTA+GGG | + | chr7_2:82176101-82176120 | Msa1082190:five_prime_UTR | 25.0% |
| !! | AATGAAAAGGACAATGATTT+TGG | - | chr7_2:82176165-82176184 | None:intergenic | 25.0% |
| ! | TACATTTATTAGAAGCTGAA+AGG | - | chr7_2:82176473-82176492 | None:intergenic | 25.0% |
| ! | CTTATTCAGTTACTTATTTC+AGG | + | chr7_2:82176563-82176582 | Msa1082190:intron | 25.0% |
| !! | CTTTCATTCATGAACTATTT+TGG | + | chr7_2:82176599-82176618 | Msa1082190:intron | 25.0% |
| !!! | CATGAACTATTTTGGAAAAA+CGG | + | chr7_2:82176607-82176626 | Msa1082190:intron | 25.0% |
| ! | AGAAAAAATAAGAGTAGAAG+AGG | + | chr7_2:82176965-82176984 | Msa1082190:CDS | 25.0% |
| ! | GAAAAAATAAGAGTAGAAGA+GGG | + | chr7_2:82176966-82176985 | Msa1082190:CDS | 25.0% |
| ! | AAAACCTTTCATGCTAATTT+GGG | - | chr7_2:82176996-82177015 | None:intergenic | 25.0% |
| ! | AAAAACCTTTCATGCTAATT+TGG | - | chr7_2:82176997-82177016 | None:intergenic | 25.0% |
| ! | TGAACAGTATGTAACAAAAT+TGG | - | chr7_2:82177036-82177055 | None:intergenic | 25.0% |
| !!! | TTCATTGACTTTTTTCTTTC+TGG | + | chr7_2:82177052-82177071 | Msa1082190:intron | 25.0% |
| ! | TGAAATGAATGGATAAGATT+TGG | - | chr7_2:82177323-82177342 | None:intergenic | 25.0% |
| !!! | TCCCCTAATTTTTTTTCTTT+TGG | + | chr7_2:82177488-82177507 | Msa1082190:intron | 25.0% |
| ! | GCCAAAAGAAAAAAAATTAG+GGG | - | chr7_2:82177492-82177511 | None:intergenic | 25.0% |
| ! | GGCCAAAAGAAAAAAAATTA+GGG | - | chr7_2:82177493-82177512 | None:intergenic | 25.0% |
| ! | TGGCCAAAAGAAAAAAAATT+AGG | - | chr7_2:82177494-82177513 | None:intergenic | 25.0% |
| !!! | TAGATTATTTTGTCACTCAT+AGG | - | chr7_2:82177613-82177632 | None:intergenic | 25.0% |
| ! | AAAGACAGAAATATCATTGA+TGG | + | chr7_2:82177728-82177747 | Msa1082190:intron | 25.0% |
| ! | AATTTGGGGAAATAAAAAAG+AGG | + | chr7_2:82177858-82177877 | Msa1082190:intron | 25.0% |
| ! | AAGAGGAACAAAAAAATTTG+GGG | + | chr7_2:82177875-82177894 | Msa1082190:intron | 25.0% |
| ! | TAAAATGAATGGATGAGATT+TGG | + | chr7_2:82178019-82178038 | Msa1082190:intron | 25.0% |
| !!! | ATTTTTTATTCAGGAACTTG+TGG | + | chr7_2:82178122-82178141 | Msa1082190:intron | 25.0% |
| !!! | GTACTGTAGATTTACTTTTT+TGG | + | chr7_2:82178406-82178425 | Msa1082190:intron | 25.0% |
| !!! | ACTGTAGATTTACTTTTTTG+GGG | + | chr7_2:82178408-82178427 | Msa1082190:intron | 25.0% |
| !! | TTGTATTTCCTTTTTATCCT+TGG | - | chr7_2:82178528-82178547 | None:intergenic | 25.0% |
| ! | AAGGAAATACAATACAATCA+AGG | + | chr7_2:82178536-82178555 | Msa1082190:CDS | 25.0% |
| ! | TTAAATCTATTAGAGTGGAA+TGG | - | chr7_2:82178782-82178801 | None:intergenic | 25.0% |
| ! | CCATATTAAATCTATTAGAG+TGG | - | chr7_2:82178787-82178806 | None:intergenic | 25.0% |
| ! | CCACTCTAATAGATTTAATA+TGG | + | chr7_2:82178784-82178803 | Msa1082190:intron | 25.0% |
| ! | TATTATTGCATCAAGTTTGT+AGG | + | chr7_2:82178924-82178943 | Msa1082190:intron | 25.0% |
| ! | AATGAGCAATTATATAGATC+AGG | + | chr7_2:82178969-82178988 | Msa1082190:CDS | 25.0% |
| !! | TTTATCTTTACCTTTTGTTC+TGG | + | chr7_2:82179010-82179029 | Msa1082190:CDS | 25.0% |
| ! | AAAAAGGTAGATAATGATGA+TGG | - | chr7_2:82179046-82179065 | None:intergenic | 25.0% |
| !! | AATGTTGTTCAATTTTACCT+TGG | + | chr7_2:82179085-82179104 | Msa1082190:intron | 25.0% |
| !! | CTAATTAAGCATATGTTTTG+TGG | - | chr7_2:82179154-82179173 | None:intergenic | 25.0% |
| ! | ACACTACTTGATACTTAATT+AGG | - | chr7_2:82179698-82179717 | None:intergenic | 25.0% |
| !!! | TTAAGAAAGTACTTGATGAA+TGG | - | chr7_2:82180193-82180212 | None:intergenic | 25.0% |
| ! | GATTAATTTCAGAATTGGTT+AGG | + | chr7_2:82180298-82180317 | Msa1082190:intron | 25.0% |
| ! | GATGACATTCAAAAGAAAAT+TGG | - | chr7_2:82180410-82180429 | None:intergenic | 25.0% |
| !!! | GATTTACCTGTTATTTCTAT+AGG | + | chr7_2:82180442-82180461 | Msa1082190:intron | 25.0% |
| ! | AAAAAATGACACTAATCCTT+GGG | + | chr7_2:82180606-82180625 | Msa1082190:intron | 25.0% |
| !!! | ACAATGTTGAAAATTTTAGC+TGG | - | chr7_2:82180720-82180739 | None:intergenic | 25.0% |
| !!! | ATTTACAGTTTTATTGGTGA+CGG | - | chr7_2:82180888-82180907 | None:intergenic | 25.0% |
| !!! | GCAATCATTTACAGTTTTAT+TGG | - | chr7_2:82180894-82180913 | None:intergenic | 25.0% |
| ! | GTATTCATGAAATGCTTATA+GGG | - | chr7_2:82181299-82181318 | None:intergenic | 25.0% |
| ! | TGTATTCATGAAATGCTTAT+AGG | - | chr7_2:82181300-82181319 | None:intergenic | 25.0% |
| ! | TCCTTTAATATTCTCTCTTT+GGG | + | chr7_2:82181347-82181366 | Msa1082190:intron | 25.0% |
| !! | ACTCAACTCTATTTTATTCA+CGG | + | chr7_2:82181451-82181470 | Msa1082190:CDS | 25.0% |
| TTAAGTAACTCGATATAGTG+AGG | + | chr7_2:82176029-82176048 | Msa1082190:five_prime_UTR | 30.0% | |
| TCAAAATAGTCCTAAACCTT+AGG | + | chr7_2:82176062-82176081 | Msa1082190:five_prime_UTR | 30.0% | |
| ! | TCTAACTTTTCCTAAGGTTT+AGG | - | chr7_2:82176075-82176094 | None:intergenic | 30.0% |
| ACAATCATACAATTGACACT+AGG | - | chr7_2:82176823-82176842 | None:intergenic | 30.0% | |
| TAGTGTCAATTGTATGATTG+TGG | + | chr7_2:82176822-82176841 | Msa1082190:intron | 30.0% | |
| AGTGTCAATTGTATGATTGT+GGG | + | chr7_2:82176823-82176842 | Msa1082190:intron | 30.0% | |
| AAACCTTTCATGCTAATTTG+GGG | - | chr7_2:82176995-82177014 | None:intergenic | 30.0% | |
| GTAACAAAATTGGTCAAACA+AGG | - | chr7_2:82177026-82177045 | None:intergenic | 30.0% | |
| TACAACCAGCAATAAATTAG+AGG | - | chr7_2:82177083-82177102 | None:intergenic | 30.0% | |
| !! | TCAAACTAATTTTGACACCA+TGG | - | chr7_2:82178044-82178063 | None:intergenic | 30.0% |
| !!! | AAACAATCCCTTCTTGTTTT+TGG | + | chr7_2:82177443-82177462 | Msa1082190:intron | 30.0% |
| GAATCTACCAAAAACAAGAA+GGG | - | chr7_2:82177453-82177472 | None:intergenic | 30.0% | |
| TGAATCTACCAAAAACAAGA+AGG | - | chr7_2:82177454-82177473 | None:intergenic | 30.0% | |
| ! | AAAGTTTGAGTTTGTGCTTA+TGG | - | chr7_2:82177514-82177533 | None:intergenic | 30.0% |
| !! | ATTAGGTGATAGAGAGTATT+TGG | + | chr7_2:82177951-82177970 | Msa1082190:intron | 30.0% |
| AAGGAAAAACAACCTTATCA+GGG | - | chr7_2:82178334-82178353 | None:intergenic | 30.0% | |
| AAAGGAAAAACAACCTTATC+AGG | - | chr7_2:82178335-82178354 | None:intergenic | 30.0% | |
| !!! | CTGTAGATTTACTTTTTTGG+GGG | + | chr7_2:82178409-82178428 | Msa1082190:intron | 30.0% |
| !!! | TGTAGATTTACTTTTTTGGG+GGG | + | chr7_2:82178410-82178429 | Msa1082190:intron | 30.0% |
| AAGTTACAACTTGAGATTGT+GGG | - | chr7_2:82178586-82178605 | None:intergenic | 30.0% | |
| AAAGTTACAACTTGAGATTG+TGG | - | chr7_2:82178587-82178606 | None:intergenic | 30.0% | |
| ! | ATGGTCCTTGATTGTATTTT+AGG | - | chr7_2:82178661-82178680 | None:intergenic | 30.0% |
| TGCAAACACTATAAAATGGA+AGG | + | chr7_2:82179312-82179331 | Msa1082190:intron | 30.0% | |
| ATAAGCTCAATGCTATGTTA+TGG | + | chr7_2:82179389-82179408 | Msa1082190:intron | 30.0% | |
| AAGCTTCAATTTCCTTATCT+AGG | + | chr7_2:82179644-82179663 | Msa1082190:intron | 30.0% | |
| GTGTCATAAAATCAAGAAAG+TGG | + | chr7_2:82179714-82179733 | Msa1082190:intron | 30.0% | |
| GAGCTAGTTAATCCTATTTA+AGG | + | chr7_2:82179736-82179755 | Msa1082190:intron | 30.0% | |
| ! | TCTCTACTTGAAAACTCTTT+TGG | - | chr7_2:82179776-82179795 | None:intergenic | 30.0% |
| !!! | TTTTCAAGTAGAGAAGTTCT+GGG | + | chr7_2:82179782-82179801 | Msa1082190:intron | 30.0% |
| TATTGCTACACTCAATGTTA+CGG | + | chr7_2:82179970-82179989 | Msa1082190:CDS | 30.0% | |
| ATGATATCACTTACTACAAC+GGG | - | chr7_2:82180255-82180274 | None:intergenic | 30.0% | |
| CATGATATCACTTACTACAA+CGG | - | chr7_2:82180256-82180275 | None:intergenic | 30.0% | |
| AAATGCCCTATAGAAATAAC+AGG | - | chr7_2:82180451-82180470 | None:intergenic | 30.0% | |
| !! | TGTTGCAATTGTTGTTTGTT+TGG | + | chr7_2:82180503-82180522 | Msa1082190:intron | 30.0% |
| AATCCTCATCTTAATTCTCA+TGG | + | chr7_2:82180580-82180599 | Msa1082190:intron | 30.0% | |
| GAAAAAATGACACTAATCCT+TGG | + | chr7_2:82180605-82180624 | Msa1082190:intron | 30.0% | |
| ! | CTGATATCGTTAGTTCTTTA+GGG | + | chr7_2:82180649-82180668 | Msa1082190:intron | 30.0% |
| TTAAAGCAATACTACTACCA+AGG | - | chr7_2:82181228-82181247 | None:intergenic | 30.0% | |
| CAAAGAGAGAATATTAAAGG+AGG | - | chr7_2:82181348-82181367 | None:intergenic | 30.0% | |
| CTCCTTTAATATTCTCTCTT+TGG | + | chr7_2:82181346-82181365 | Msa1082190:intron | 30.0% | |
| TCCCAAAGAGAGAATATTAA+AGG | - | chr7_2:82181351-82181370 | None:intergenic | 30.0% | |
| ! | ATTTTATTCACGGTTGAACA+TGG | + | chr7_2:82181461-82181480 | Msa1082190:CDS | 30.0% |
| GTTGAGATCCAATTGTTATA+GGG | - | chr7_2:82181517-82181536 | None:intergenic | 30.0% | |
| AGTTGAGATCCAATTGTTAT+AGG | - | chr7_2:82181518-82181537 | None:intergenic | 30.0% | |
| ACCTTAGGAAAAGTTAGAAG+AGG | + | chr7_2:82176077-82176096 | Msa1082190:five_prime_UTR | 35.0% | |
| ! | TCCTCTTCTAACTTTTCCTA+AGG | - | chr7_2:82176081-82176100 | None:intergenic | 35.0% |
| CTATGGTGCACAAAATGAAA+AGG | - | chr7_2:82176178-82176197 | None:intergenic | 35.0% | |
| CGAAGGAAGAAATAATGCTA+TGG | - | chr7_2:82176195-82176214 | None:intergenic | 35.0% | |
| ! | ATCTGATTCAAGAGCAGTTT+TGG | - | chr7_2:82176225-82176244 | None:intergenic | 35.0% |
| AAAGTCGATAGATGGAAGAT+GGG | + | chr7_2:82176281-82176300 | Msa1082190:exon | 35.0% | |
| AATCATGTGTAGATGAAAGC+AGG | + | chr7_2:82176318-82176337 | Msa1082190:CDS | 35.0% | |
| !! | ATGGTTTAATTTGAGAGCAG+CGG | - | chr7_2:82176390-82176409 | None:intergenic | 35.0% |
| CATCATCATGTATGTCAAGA+TGG | - | chr7_2:82176409-82176428 | None:intergenic | 35.0% | |
| ATGCATAACCAATTCAGAGA+AGG | - | chr7_2:82176795-82176814 | None:intergenic | 35.0% | |
| ACAGTAGCAAGAAGAAAAAG+AGG | + | chr7_2:82176924-82176943 | Msa1082190:intron | 35.0% | |
| CAGTAGCAAGAAGAAAAAGA+GGG | + | chr7_2:82176925-82176944 | Msa1082190:intron | 35.0% | |
| AGTAGCAAGAAGAAAAAGAG+GGG | + | chr7_2:82176926-82176945 | Msa1082190:intron | 35.0% | |
| AACCTTTCATGCTAATTTGG+GGG | - | chr7_2:82176994-82177013 | None:intergenic | 35.0% | |
| TTCTGCCTCTAATTTATTGC+TGG | + | chr7_2:82177075-82177094 | Msa1082190:intron | 35.0% | |
| TTGGAGAAGGTAGAAAGTAA+GGG | + | chr7_2:82177110-82177129 | Msa1082190:CDS | 35.0% | |
| GAACAACTTTCAATGAGGTT+AGG | + | chr7_2:82177135-82177154 | Msa1082190:intron | 35.0% | |
| !!! | TGGTGATAGTTTTAAGCCTT+TGG | - | chr7_2:82177990-82178009 | None:intergenic | 35.0% |
| ATGATGACTCAAACAACCAT+AGG | + | chr7_2:82177753-82177772 | Msa1082190:intron | 35.0% | |
| TGGTAGAACTCATATACCTA+TGG | - | chr7_2:82177772-82177791 | None:intergenic | 35.0% | |
| !!! | TGGTGATAGTTTTAAGCCTT+TGG | + | chr7_2:82177990-82178009 | Msa1082190:intron | 35.0% |
| AGGAAAAACAACCTTATCAG+GGG | - | chr7_2:82178333-82178352 | None:intergenic | 35.0% | |
| GAGAACATTCAGAACATCAT+AGG | - | chr7_2:82178486-82178505 | None:intergenic | 35.0% | |
| ! | TGATGTTCTGAATGTTCTCA+TGG | + | chr7_2:82178487-82178506 | Msa1082190:CDS | 35.0% |
| GGCAATGGATATTATTTCCA+AGG | + | chr7_2:82178508-82178527 | Msa1082190:CDS | 35.0% | |
| !!! | TAACTTTTTTTTCCCCCATG+TGG | + | chr7_2:82178600-82178619 | Msa1082190:intron | 35.0% |
| TTAATTCAGAACATCACTGC+AGG | - | chr7_2:82178637-82178656 | None:intergenic | 35.0% | |
| ATTCAACAGATCGAATGTCT+AGG | + | chr7_2:82178695-82178714 | Msa1082190:intron | 35.0% | |
| TTCAACAGATCGAATGTCTA+GGG | + | chr7_2:82178696-82178715 | Msa1082190:intron | 35.0% | |
| ! | AAGCAAAGTATCCTACCTAA+AGG | + | chr7_2:82178736-82178755 | Msa1082190:CDS | 35.0% |
| AAACACAAGACACTACAGAA+AGG | - | chr7_2:82178881-82178900 | None:intergenic | 35.0% | |
| ATTGCTCATTTCGTTGAACA+AGG | - | chr7_2:82178959-82178978 | None:intergenic | 35.0% | |
| AAAGATAAATCTCCGCTTGA+AGG | - | chr7_2:82178999-82179018 | None:intergenic | 35.0% | |
| !!! | TTTACCTTTTGTTCTGGTTC+AGG | + | chr7_2:82179016-82179035 | Msa1082190:CDS | 35.0% |
| ATCACACAATTGAAGATCCA+AGG | - | chr7_2:82179105-82179124 | None:intergenic | 35.0% | |
| CAGCTGCAAACACTATAAAA+TGG | + | chr7_2:82179308-82179327 | Msa1082190:intron | 35.0% | |
| GCTATGTTATGGAGAATTCT+TGG | + | chr7_2:82179400-82179419 | Msa1082190:intron | 35.0% | |
| !! | TAGAAACTTTTTCCGATCTG+TGG | - | chr7_2:82179426-82179445 | None:intergenic | 35.0% |
| !! | ACAAAATCTGTTTTTCCTGC+TGG | + | chr7_2:82179462-82179481 | Msa1082190:intron | 35.0% |
| ! | CTACTTGAAAACTCTTTTGG+TGG | - | chr7_2:82179773-82179792 | None:intergenic | 35.0% |
| !!! | GTTTTCAAGTAGAGAAGTTC+TGG | + | chr7_2:82179781-82179800 | Msa1082190:intron | 35.0% |
| AAGGGAGAGTAAACATAAAC+CGG | - | chr7_2:82179866-82179885 | None:intergenic | 35.0% | |
| ! | TGGAATTTTGTGATAGACCT+CGG | + | chr7_2:82179942-82179961 | Msa1082190:CDS | 35.0% |
| ACCTTAAGTATTCCAGAAAG+CGG | - | chr7_2:82180088-82180107 | None:intergenic | 35.0% | |
| !! | GAAAGTACTTGATGAATGGT+AGG | - | chr7_2:82180189-82180208 | None:intergenic | 35.0% |
| TGATATCACTTACTACAACG+GGG | - | chr7_2:82180254-82180273 | None:intergenic | 35.0% | |
| CGTTGTAGTAAGTGATATCA+TGG | + | chr7_2:82180254-82180273 | Msa1082190:intron | 35.0% | |
| TAGTAAGTGATATCATGGAC+TGG | + | chr7_2:82180259-82180278 | Msa1082190:intron | 35.0% | |
| GTGTTCTATCACAACTTTGA+TGG | + | chr7_2:82180374-82180393 | Msa1082190:intron | 35.0% | |
| GCGAAATTCAACAATGTTTC+TGG | + | chr7_2:82180548-82180567 | Msa1082190:intron | 35.0% | |
| CTTCCATGAGAATTAAGATG+AGG | - | chr7_2:82180586-82180605 | None:intergenic | 35.0% | |
| TTTGTCATTCTCAATTCCCA+AGG | - | chr7_2:82180625-82180644 | None:intergenic | 35.0% | |
| ! | GCTGATATCGTTAGTTCTTT+AGG | + | chr7_2:82180648-82180667 | Msa1082190:intron | 35.0% |
| ! | TGTTTGTTAGGAAAGCTAAC+TGG | + | chr7_2:82180775-82180794 | Msa1082190:intron | 35.0% |
| TACAACCATCATTACAGCAA+TGG | + | chr7_2:82180805-82180824 | Msa1082190:CDS | 35.0% | |
| ACTTACCATTGCTGTAATGA+TGG | - | chr7_2:82180813-82180832 | None:intergenic | 35.0% | |
| TTACAGCAATGGTAAGTCTT+TGG | + | chr7_2:82180816-82180835 | Msa1082190:intron | 35.0% | |
| TTCAGATCCAAAATGTCATG+TGG | + | chr7_2:82180918-82180937 | Msa1082190:intron | 35.0% | |
| ACGTATTCAGAATTCTCCAA+GGG | - | chr7_2:82180982-82181001 | None:intergenic | 35.0% | |
| AACGTATTCAGAATTCTCCA+AGG | - | chr7_2:82180983-82181002 | None:intergenic | 35.0% | |
| AAACCCTAAACCTAAACCTT+TGG | + | chr7_2:82181111-82181130 | Msa1082190:intron | 35.0% | |
| ATTTGAATAATTCCCGCCAA+AGG | - | chr7_2:82181130-82181149 | None:intergenic | 35.0% | |
| TTGAGTGATGAGAAAAAGTG+AGG | - | chr7_2:82181437-82181456 | None:intergenic | 35.0% | |
| AGTCACTTCTGATTGCTTTA+GGG | - | chr7_2:82181493-82181512 | None:intergenic | 35.0% | |
| AAGTCACTTCTGATTGCTTT+AGG | - | chr7_2:82181494-82181513 | None:intergenic | 35.0% | |
| AGTGACTTCCCTATAACAAT+TGG | + | chr7_2:82181506-82181525 | Msa1082190:CDS | 35.0% | |
| !! | AAGGACAATGATTTTGGCAG+AGG | - | chr7_2:82176159-82176178 | None:intergenic | 40.0% |
| TTGTTGCGAAAGTCGATAGA+TGG | + | chr7_2:82176273-82176292 | Msa1082190:five_prime_UTR | 40.0% | |
| GAAAGTCGATAGATGGAAGA+TGG | + | chr7_2:82176280-82176299 | Msa1082190:exon | 40.0% | |
| ! | GACATACATGATGATGATGC+AGG | + | chr7_2:82176413-82176432 | Msa1082190:CDS | 40.0% |
| AGAAGCTGAAAGGATTAGAG+AGG | - | chr7_2:82176463-82176482 | None:intergenic | 40.0% | |
| !! | TTTTTCTAGCATCCCGTTGT+TGG | - | chr7_2:82176952-82176971 | None:intergenic | 40.0% |
| GTTGGAGAAGGTAGAAAGTA+AGG | + | chr7_2:82177109-82177128 | Msa1082190:CDS | 40.0% | |
| GGGAAGAACAACTTTCAATG+AGG | + | chr7_2:82177130-82177149 | Msa1082190:CDS | 40.0% | |
| CAACTTTCAATGAGGTTAGG+TGG | + | chr7_2:82177138-82177157 | Msa1082190:intron | 40.0% | |
| TCTCTTGCTTCAGTTTCATG+TGG | + | chr7_2:82177194-82177213 | Msa1082190:intron | 40.0% | |
| GAATCATTAGTCGAGCTTGT+TGG | + | chr7_2:82177652-82177671 | Msa1082190:intron | 40.0% | |
| GTCAGGATCAAATGACATCA+TGG | - | chr7_2:82178064-82178083 | None:intergenic | 40.0% | |
| GGGGACAAAACACTATTCAT+TGG | - | chr7_2:82178314-82178333 | None:intergenic | 40.0% | |
| ! | TAGTGTTTTGTCCCCTGATA+AGG | + | chr7_2:82178319-82178338 | Msa1082190:CDS | 40.0% |
| TCTGAATGTTCTCATGGCAA+TGG | + | chr7_2:82178493-82178512 | Msa1082190:CDS | 40.0% | |
| AGGAGCTATTGAGAAGCTAA+AGG | + | chr7_2:82178556-82178575 | Msa1082190:CDS | 40.0% | |
| AGGTAAAGCTTAAGCCACAT+GGG | - | chr7_2:82178617-82178636 | None:intergenic | 40.0% | |
| TGCTGCACTTGATTACAAGA+AGG | + | chr7_2:82178836-82178855 | Msa1082190:intron | 40.0% | |
| AAGGAAGCGATATGTTAGTC+AGG | - | chr7_2:82178862-82178881 | None:intergenic | 40.0% | |
| AGATCAGGAAATCCTTCAAG+CGG | + | chr7_2:82178984-82179003 | Msa1082190:CDS | 40.0% | |
| TGTACCTGAACCAGAACAAA+AGG | - | chr7_2:82179023-82179042 | None:intergenic | 40.0% | |
| ! | GCATATGTTTTGTGGTGAGT+TGG | - | chr7_2:82179146-82179165 | None:intergenic | 40.0% |
| CTAGGAATTAACAAAGCAGC+TGG | - | chr7_2:82179227-82179246 | None:intergenic | 40.0% | |
| CAAACGAATGTCCACAAAAG+AGG | - | chr7_2:82179263-82179282 | None:intergenic | 40.0% | |
| TCAAGTTCAACAGTTGCATG+AGG | - | chr7_2:82179564-82179583 | None:intergenic | 40.0% | |
| TGCAACTGTTGAACTTGAAG+TGG | + | chr7_2:82179566-82179585 | Msa1082190:CDS | 40.0% | |
| ACAGCATACAGACCTAGATA+AGG | - | chr7_2:82179659-82179678 | None:intergenic | 40.0% | |
| CTACTATGTGCTCAAAGCAA+TGG | + | chr7_2:82179922-82179941 | Msa1082190:CDS | 40.0% | |
| ATTGACACGCTTGAAACTGA+AGG | - | chr7_2:82180046-82180065 | None:intergenic | 40.0% | |
| CAGTTTCAAGCGTGTCAATT+AGG | + | chr7_2:82180047-82180066 | Msa1082190:CDS | 40.0% | |
| TTAAGTATTCCAGAAAGCGG+AGG | - | chr7_2:82180085-82180104 | None:intergenic | 40.0% | |
| !! | TCCGCTTTCTGGAATACTTA+AGG | + | chr7_2:82180084-82180103 | Msa1082190:CDS | 40.0% |
| ACTTGATGAATGGTAGGCAA+AGG | - | chr7_2:82180183-82180202 | None:intergenic | 40.0% | |
| GACTGGAGTCCAACAAAAAT+AGG | + | chr7_2:82180276-82180295 | Msa1082190:intron | 40.0% | |
| TGTTGAATTTCGCATGCTCA+AGG | - | chr7_2:82180541-82180560 | None:intergenic | 40.0% | |
| TAGGGTTTGCATTGTACCTT+AGG | - | chr7_2:82181085-82181104 | None:intergenic | 40.0% | |
| GTACAATGCAAACCCTACTT+GGG | + | chr7_2:82181088-82181107 | Msa1082190:intron | 40.0% | |
| ATAATTCCCGCCAAAGGTTT+AGG | - | chr7_2:82181124-82181143 | None:intergenic | 40.0% | |
| GCTTATCAATGCAGATTCCT+TGG | + | chr7_2:82181208-82181227 | Msa1082190:intron | 40.0% | |
| GAGATTATGGAGGAGAAATG+AGG | - | chr7_2:82181390-82181409 | None:intergenic | 40.0% | |
| ! | GATGATGATGCAGGATCACA+AGG | + | chr7_2:82176422-82176441 | Msa1082190:CDS | 45.0% |
| CGTCTTCTCCTTCTCTGAAT+TGG | + | chr7_2:82176784-82176803 | Msa1082190:intron | 45.0% | |
| AAAATCGATCCGCACCAACT+CGG | + | chr7_2:82176894-82176913 | Msa1082190:intron | 45.0% | |
| AGAAAAAGAGGGGCCAACAA+CGG | + | chr7_2:82176936-82176955 | Msa1082190:CDS | 45.0% | |
| CTCCCCCAAATTAGCATGAA+AGG | + | chr7_2:82176989-82177008 | Msa1082190:CDS | 45.0% | |
| ! | TTGCTGGTTGTATGCAGTGT+TGG | + | chr7_2:82177091-82177110 | Msa1082190:intron | 45.0% |
| ! | GTTGTATGCAGTGTTGGAGA+AGG | + | chr7_2:82177097-82177116 | Msa1082190:intron | 45.0% |
| GTCAGGATCAAATGACACCA+TGG | + | chr7_2:82177278-82177297 | Msa1082190:intron | 45.0% | |
| ATGAGAAAAACGTCCGTCGA+AGG | + | chr7_2:82178459-82178478 | Msa1082190:CDS | 45.0% | |
| TGAGAAAAACGTCCGTCGAA+GGG | + | chr7_2:82178460-82178479 | Msa1082190:CDS | 45.0% | |
| GTAAAGCTTAAGCCACATGG+GGG | - | chr7_2:82178615-82178634 | None:intergenic | 45.0% | |
| GGTAAAGCTTAAGCCACATG+GGG | - | chr7_2:82178616-82178635 | None:intergenic | 45.0% | |
| CAGGTAAAGCTTAAGCCACA+TGG | - | chr7_2:82178618-82178637 | None:intergenic | 45.0% | |
| ATCCTACCTAAAGGAGCTTG+AGG | + | chr7_2:82178745-82178764 | Msa1082190:CDS | 45.0% | |
| TTCCTCAAGCTCCTTTAGGT+AGG | - | chr7_2:82178750-82178769 | None:intergenic | 45.0% | |
| CTTGTTCCTCAAGCTCCTTT+AGG | - | chr7_2:82178754-82178773 | None:intergenic | 45.0% | |
| GTAATCAAGTGCAGCAAACC+AGG | - | chr7_2:82178832-82178851 | None:intergenic | 45.0% | |
| GAGAATTCTTGGCCACAGAT+CGG | + | chr7_2:82179411-82179430 | Msa1082190:intron | 45.0% | |
| TCCTGCTGGATGCTTTAATG+TGG | + | chr7_2:82179476-82179495 | Msa1082190:intron | 45.0% | |
| ! | ACCACATTAAAGCATCCAGC+AGG | - | chr7_2:82179480-82179499 | None:intergenic | 45.0% |
| !! | GTCACTGCTTGGCCTTAAAT+AGG | - | chr7_2:82179751-82179770 | None:intergenic | 45.0% |
| !! | TCAAGTAGAGAAGTTCTGGG+AGG | + | chr7_2:82179785-82179804 | Msa1082190:intron | 45.0% |
| ! | TGATGCTTTTGTCCCTGTGT+TGG | + | chr7_2:82179822-82179841 | Msa1082190:intron | 45.0% |
| ! | GATGCTTTTGTCCCTGTGTT+GGG | + | chr7_2:82179823-82179842 | Msa1082190:intron | 45.0% |
| CAGTTACATCTCCCAACACA+GGG | - | chr7_2:82179837-82179856 | None:intergenic | 45.0% | |
| ACAGTTACATCTCCCAACAC+AGG | - | chr7_2:82179838-82179857 | None:intergenic | 45.0% | |
| ! | GGAGATGTAACTGTCACTTC+CGG | + | chr7_2:82179844-82179863 | Msa1082190:intron | 45.0% |
| !! | AGAGTACTGCAGAGAGAGAA+GGG | - | chr7_2:82179884-82179903 | None:intergenic | 45.0% |
| !! | AAGAGTACTGCAGAGAGAGA+AGG | - | chr7_2:82179885-82179904 | None:intergenic | 45.0% |
| AGTGTAGCAATATCTCTCCG+AGG | - | chr7_2:82179962-82179981 | None:intergenic | 45.0% | |
| GCTACACTCAATGTTACGGA+AGG | + | chr7_2:82179974-82179993 | Msa1082190:CDS | 45.0% | |
| ACACTCAATGTTACGGAAGG+AGG | + | chr7_2:82179977-82179996 | Msa1082190:CDS | 45.0% | |
| CACTCAATGTTACGGAAGGA+GGG | + | chr7_2:82179978-82179997 | Msa1082190:CDS | 45.0% | |
| ACTCAATGTTACGGAAGGAG+GGG | + | chr7_2:82179979-82179998 | Msa1082190:CDS | 45.0% | |
| TGACGGTGATACTTTGTCAG+GGG | - | chr7_2:82180871-82180890 | None:intergenic | 45.0% | |
| GTGACGGTGATACTTTGTCA+GGG | - | chr7_2:82180872-82180891 | None:intergenic | 45.0% | |
| GAATGACACACAGTTTCCCT+TGG | + | chr7_2:82180963-82180982 | Msa1082190:CDS | 45.0% | |
| TACGTTTCAACTGCTGCAAC+TGG | + | chr7_2:82180997-82181016 | Msa1082190:CDS | 45.0% | |
| GGTACAATGCAAACCCTACT+TGG | + | chr7_2:82181087-82181106 | Msa1082190:intron | 45.0% | |
| ! | GGTTTAGGGTTTCCCAAGTA+GGG | - | chr7_2:82181103-82181122 | None:intergenic | 45.0% |
| ! | AGGTTTAGGGTTTCCCAAGT+AGG | - | chr7_2:82181104-82181123 | None:intergenic | 45.0% |
| ! | CCGCCAAAGGTTTAGGTTTA+GGG | - | chr7_2:82181117-82181136 | None:intergenic | 45.0% |
| CCCTAAACCTAAACCTTTGG+CGG | + | chr7_2:82181114-82181133 | Msa1082190:intron | 45.0% | |
| CCTAAACCTAAACCTTTGGC+GGG | + | chr7_2:82181115-82181134 | Msa1082190:intron | 45.0% | |
| TTAAAGGAGGTCAGACTGCA+TGG | - | chr7_2:82181335-82181354 | None:intergenic | 45.0% | |
| !!! | GCAGTTTTGGTTTCGAGCGA+AGG | - | chr7_2:82176212-82176231 | None:intergenic | 50.0% |
| ! | GTAGATGAAAGCAGGAGTGC+TGG | + | chr7_2:82176326-82176345 | Msa1082190:CDS | 50.0% |
| !!! | GTGCTGGTTTTCCATCTAGC+CGG | + | chr7_2:82176342-82176361 | Msa1082190:CDS | 50.0% |
| GAAGGAGAAGACGAAGACGA+AGG | - | chr7_2:82176777-82176796 | None:intergenic | 50.0% | |
| CTACTGTGTAGACACCGAGT+TGG | - | chr7_2:82176911-82176930 | None:intergenic | 50.0% | |
| GAAAAAGAGGGGCCAACAAC+GGG | + | chr7_2:82176937-82176956 | Msa1082190:CDS | 50.0% | |
| CTAGGTGGCAGATGAACTTG+TGG | + | chr7_2:82178274-82178293 | Msa1082190:intron | 50.0% | |
| GAACATCATAGGCCCTTCGA+CGG | - | chr7_2:82178475-82178494 | None:intergenic | 50.0% | |
| !! | CTCTTTTGGTGGTCACTGCT+TGG | - | chr7_2:82179762-82179781 | None:intergenic | 50.0% |
| !!! | GAAGTTCTGGGAGGCAGTTT+TGG | + | chr7_2:82179794-82179813 | Msa1082190:intron | 50.0% |
| AATGTTACGGAAGGAGGGGA+AGG | + | chr7_2:82179983-82180002 | Msa1082190:CDS | 50.0% | |
| GACACGCTTGAAACTGAAGG+AGG | - | chr7_2:82180043-82180062 | None:intergenic | 50.0% | |
| AAGCGTGTCAATTAGGCCTC+AGG | + | chr7_2:82180054-82180073 | Msa1082190:CDS | 50.0% | |
| ! | GGTGACGGTGATACTTTGTC+AGG | - | chr7_2:82180873-82180892 | None:intergenic | 50.0% |
| ! | CCCGCCAAAGGTTTAGGTTT+AGG | - | chr7_2:82181118-82181137 | None:intergenic | 50.0% |
| GAAGACGAAGACGAAGGCGA+AGG | - | chr7_2:82176771-82176790 | None:intergenic | 55.0% | |
| !! | GTGTAGACACCGAGTTGGTG+CGG | - | chr7_2:82176906-82176925 | None:intergenic | 55.0% |
| AAGTGCAGCAAACCAGGTCC+AGG | - | chr7_2:82178826-82178845 | None:intergenic | 55.0% | |
| !!! | GTTCTGGGAGGCAGTTTTGG+TGG | + | chr7_2:82179797-82179816 | Msa1082190:intron | 55.0% |
| !! | GGGGAAGGTTCTAGCTTGTC+AGG | + | chr7_2:82179998-82180017 | Msa1082190:CDS | 55.0% |
| GTCAGGCTTGCATCAGTTGC+AGG | + | chr7_2:82180015-82180034 | Msa1082190:CDS | 55.0% | |
| GGAAGATGGGAACGCGACTG+CGG | + | chr7_2:82176294-82176313 | Msa1082190:exon | 60.0% | |
| GGGGATGATGTCCTCAGTCC+TGG | + | chr7_2:82178805-82178824 | Msa1082190:intron | 60.0% | |
| GATGTCCTCAGTCCTGGACC+TGG | + | chr7_2:82178811-82178830 | Msa1082190:intron | 60.0% | |
| GCAAACCAGGTCCAGGACTG+AGG | - | chr7_2:82178819-82178838 | None:intergenic | 60.0% | |
| GAAAGCGGAGGTGATGCCTG+AGG | - | chr7_2:82180073-82180092 | None:intergenic | 60.0% | |
| CAGGCATCACCTCCGCTTTC+TGG | + | chr7_2:82180073-82180092 | Msa1082190:CDS | 60.0% | |
| !! | GTCGGCTTGCTCCGGCTAGA+TGG | - | chr7_2:82176356-82176375 | None:intergenic | 65.0% |
| !! | TCTGCGTCGTCGGCTTGCTC+CGG | - | chr7_2:82176364-82176383 | None:intergenic | 65.0% |
| GCAGCGGCTGTCTGCGTCGT+CGG | - | chr7_2:82176374-82176393 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 82175942 | 82181556 | 82175942 | ID=Msa1082190;Name=Msa1082190 |
| chr7_2 | mRNA | 82175942 | 82181556 | 82175942 | ID=Msa1082190-mRNA-1;Parent=Msa1082190;Name=Msa1082190-mRNA-1;_AED=0.14;_eAED=0.14;_QI=357|0.81|0.66|0.91|1|1|12|0|398 |
| chr7_2 | exon | 82175942 | 82176453 | 82175942 | ID=Msa1082190-mRNA-1:exon:21169;Parent=Msa1082190-mRNA-1 |
| chr7_2 | exon | 82176928 | 82177010 | 82176928 | ID=Msa1082190-mRNA-1:exon:21170;Parent=Msa1082190-mRNA-1 |
| chr7_2 | exon | 82177108 | 82177151 | 82177108 | ID=Msa1082190-mRNA-1:exon:21171;Parent=Msa1082190-mRNA-1 |
| chr7_2 | exon | 82178278 | 82178340 | 82178278 | ID=Msa1082190-mRNA-1:exon:21172;Parent=Msa1082190-mRNA-1 |
| chr7_2 | exon | 82178449 | 82178577 | 82178449 | ID=Msa1082190-mRNA-1:exon:21173;Parent=Msa1082190-mRNA-1 |
| chr7_2 | exon | 82178704 | 82178772 | 82178704 | ID=Msa1082190-mRNA-1:exon:21174;Parent=Msa1082190-mRNA-1 |
| chr7_2 | exon | 82178939 | 82179037 | 82178939 | ID=Msa1082190-mRNA-1:exon:21175;Parent=Msa1082190-mRNA-1 |
| chr7_2 | exon | 82179555 | 82179640 | 82179555 | ID=Msa1082190-mRNA-1:exon:21176;Parent=Msa1082190-mRNA-1 |
| chr7_2 | exon | 82179898 | 82180105 | 82179898 | ID=Msa1082190-mRNA-1:exon:21177;Parent=Msa1082190-mRNA-1 |
| chr7_2 | exon | 82180790 | 82180826 | 82180790 | ID=Msa1082190-mRNA-1:exon:21178;Parent=Msa1082190-mRNA-1 |
| chr7_2 | exon | 82180923 | 82181018 | 82180923 | ID=Msa1082190-mRNA-1:exon:21179;Parent=Msa1082190-mRNA-1 |
| chr7_2 | exon | 82181429 | 82181556 | 82181429 | ID=Msa1082190-mRNA-1:exon:21180;Parent=Msa1082190-mRNA-1 |
| chr7_2 | five_prime_UTR | 82175942 | 82176298 | 82175942 | ID=Msa1082190-mRNA-1:five_prime_utr;Parent=Msa1082190-mRNA-1 |
| chr7_2 | CDS | 82176299 | 82176453 | 82176299 | ID=Msa1082190-mRNA-1:cds;Parent=Msa1082190-mRNA-1 |
| chr7_2 | CDS | 82176928 | 82177010 | 82176928 | ID=Msa1082190-mRNA-1:cds;Parent=Msa1082190-mRNA-1 |
| chr7_2 | CDS | 82177108 | 82177151 | 82177108 | ID=Msa1082190-mRNA-1:cds;Parent=Msa1082190-mRNA-1 |
| chr7_2 | CDS | 82178278 | 82178340 | 82178278 | ID=Msa1082190-mRNA-1:cds;Parent=Msa1082190-mRNA-1 |
| chr7_2 | CDS | 82178449 | 82178577 | 82178449 | ID=Msa1082190-mRNA-1:cds;Parent=Msa1082190-mRNA-1 |
| chr7_2 | CDS | 82178704 | 82178772 | 82178704 | ID=Msa1082190-mRNA-1:cds;Parent=Msa1082190-mRNA-1 |
| chr7_2 | CDS | 82178939 | 82179037 | 82178939 | ID=Msa1082190-mRNA-1:cds;Parent=Msa1082190-mRNA-1 |
| chr7_2 | CDS | 82179555 | 82179640 | 82179555 | ID=Msa1082190-mRNA-1:cds;Parent=Msa1082190-mRNA-1 |
| chr7_2 | CDS | 82179898 | 82180105 | 82179898 | ID=Msa1082190-mRNA-1:cds;Parent=Msa1082190-mRNA-1 |
| chr7_2 | CDS | 82180790 | 82180826 | 82180790 | ID=Msa1082190-mRNA-1:cds;Parent=Msa1082190-mRNA-1 |
| chr7_2 | CDS | 82180923 | 82181018 | 82180923 | ID=Msa1082190-mRNA-1:cds;Parent=Msa1082190-mRNA-1 |
| chr7_2 | CDS | 82181429 | 82181556 | 82181429 | ID=Msa1082190-mRNA-1:cds;Parent=Msa1082190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
