AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1083090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1083090 MtrunA17_Chr7g0271221 89.590 586 8 4 5 539 2 585 0.0 1046
Msa1083090 MtrunA17_Chr1g0193391 75.130 575 86 5 5 527 2 571 0.0 861
Msa1083090 MtrunA17_Chr4g0069581 52.757 544 193 6 38 527 4 537 2.76e-173 501
Msa1083090 MtrunA17_Chr3g0133341 44.306 562 232 10 20 510 14 565 6.05e-153 449
Msa1083090 MtrunA17_Chr2g0284701 40.847 590 258 13 6 506 8 595 2.49e-137 410
Msa1083090 MtrunA17_Chr8g0379971 39.933 601 261 13 8 509 2 601 1.57e-126 383
Msa1083090 MtrunA17_Chr5g0415961 37.633 566 260 13 18 499 16 572 8.00e-122 370
Msa1083090 MtrunA17_Chr8g0362711 38.530 558 255 12 20 499 24 571 2.53e-121 369
Msa1083090 MtrunA17_Chr8g0379991 40.348 575 236 11 41 509 1 574 3.57e-117 358
Msa1083090 MtrunA17_Chr2g0276751 36.625 557 283 10 4 499 16 563 3.34e-116 356
Msa1083090 MtrunA17_Chr3g0142101 35.789 570 287 12 7 504 12 574 6.15e-103 321
Msa1083090 MtrunA17_Chr4g0005901 34.254 543 291 10 20 499 32 571 2.34e-100 314
Msa1083090 MtrunA17_Chr3g0142091 35.584 548 284 10 20 504 26 567 6.43e-97 305
Msa1083090 MtrunA17_Chr7g0241741 33.151 549 301 8 20 505 22 567 5.81e-96 303
Msa1083090 MtrunA17_Chr7g0214731 32.550 553 299 8 22 501 63 614 1.52e-94 301
Msa1083090 MtrunA17_Chr8g0375311 32.234 546 301 9 20 499 40 582 2.15e-94 299
Msa1083090 MtrunA17_Chr5g0422881 35.159 566 281 13 20 504 20 580 7.49e-94 298
Msa1083090 MtrunA17_Chr7g0240381 34.457 534 286 11 24 500 33 559 1.56e-93 296
Msa1083090 MtrunA17_Chr3g0104011 32.605 549 294 11 20 499 22 563 1.60e-92 294
Msa1083090 MtrunA17_Chr5g0399071 34.452 566 295 10 20 514 25 585 2.46e-92 294
Msa1083090 MtrunA17_Chr8g0375291 33.147 537 290 8 20 490 40 573 7.07e-92 292
Msa1083090 MtrunA17_Chr3g0112671 33.394 545 301 9 20 509 33 570 1.51e-91 291
Msa1083090 MtrunA17_Chr5g0399061 34.470 557 281 15 20 501 27 574 3.97e-89 285
Msa1083090 MtrunA17_Chr7g0261811 32.810 573 309 12 7 511 14 578 4.69e-89 286
Msa1083090 MtrunA17_Chr8g0375361 32.418 546 300 8 20 499 39 581 3.58e-88 283
Msa1083090 MtrunA17_Chr4g0008651 33.211 545 300 11 20 504 34 574 1.13e-87 281
Msa1083090 MtrunA17_Chr5g0439381 33.514 555 288 12 20 509 28 566 1.44e-87 281
Msa1083090 MtrunA17_Chr4g0056431 34.452 566 292 13 20 511 25 585 3.11e-87 280
Msa1083090 MtrunA17_Chr7g0261881 31.414 573 317 12 7 511 14 578 4.09e-87 280
Msa1083090 MtrunA17_Chr4g0060071 48.571 280 129 5 232 504 32 303 1.94e-85 266
Msa1083090 MtrunA17_Chr4g0063591 33.945 545 288 10 20 499 22 559 4.60e-84 272
Msa1083090 MtrunA17_Chr8g0375321 31.627 547 305 8 20 500 37 580 1.30e-83 271
Msa1083090 MtrunA17_Chr7g0255621 31.957 557 299 13 20 503 20 569 4.44e-83 270
Msa1083090 MtrunA17_Chr8g0375341 30.586 546 310 8 20 499 40 582 3.36e-82 267
Msa1083090 MtrunA17_Chr7g0261791 30.503 577 321 9 7 512 16 583 3.45e-82 268
Msa1083090 MtrunA17_Chr8g0375351 30.515 544 309 8 20 497 40 580 7.99e-82 266
Msa1083090 MtrunA17_Chr7g0261771 30.208 576 322 11 7 511 18 584 9.44e-82 266
Msa1083090 MtrunA17_Chr7g0255611 30.957 575 309 15 20 513 29 596 1.88e-81 266
Msa1083090 MtrunA17_Chr7g0261661 34.647 482 269 12 81 529 22 490 2.36e-81 263
Msa1083090 MtrunA17_Chr7g0255601 31.942 551 295 12 22 499 29 572 5.40e-81 265
Msa1083090 MtrunA17_Chr8g0375331 31.094 521 290 8 20 474 24 541 1.40e-80 262
Msa1083090 MtrunA17_Chr3g0114501 33.456 544 294 12 22 501 24 563 1.60e-80 263
Msa1083090 MtrunA17_Chr1g0213711 30.241 539 311 10 20 497 21 555 2.97e-80 262
Msa1083090 MtrunA17_Chr1g0166791 29.617 574 335 8 7 515 11 580 9.55e-80 261
Msa1083090 MtrunA17_Chr3g0112611 30.978 552 315 9 20 509 32 579 2.37e-79 260
Msa1083090 MtrunA17_Chr1g0187241 29.188 579 331 9 7 515 13 582 2.60e-78 257
Msa1083090 MtrunA17_Chr5g0400371 29.542 589 326 14 7 511 91 674 1.39e-74 249
Msa1083090 MtrunA17_Chr5g0415791 31.449 566 310 15 20 511 29 590 2.09e-73 244
Msa1083090 MtrunA17_Chr7g0261851 30.175 570 325 10 7 509 15 578 2.63e-73 244
Msa1083090 MtrunA17_Chr7g0214461 29.603 554 315 12 21 508 79 623 6.14e-73 244
Msa1083090 MtrunA17_Chr1g0166711 31.130 575 324 11 7 515 12 580 8.37e-73 243
Msa1083090 MtrunA17_Chr3g0082631 35.682 440 238 10 103 503 30 463 1.37e-72 239
Msa1083090 MtrunA17_Chr4g0054891 29.038 582 326 13 7 506 89 665 1.87e-72 243
Msa1083090 MtrunA17_Chr7g0218851 27.549 559 336 10 21 515 47 600 3.87e-72 241
Msa1083090 MtrunA17_Chr1g0166771 35.589 399 233 6 103 482 114 507 1.07e-71 238
Msa1083090 MtrunA17_Chr7g0234381 37.408 409 216 8 105 496 33 418 1.30e-71 234
Msa1083090 MtrunA17_Chr7g0217461 30.000 550 311 9 20 498 24 570 4.60e-71 238
Msa1083090 MtrunA17_Chr8g0362801 33.475 472 272 11 78 511 6 473 5.29e-71 235
Msa1083090 MtrunA17_Chr1g0166741 29.401 568 337 10 7 515 14 576 3.26e-70 235
Msa1083090 MtrunA17_Chr1g0166731 35.185 432 248 8 103 508 45 470 4.20e-70 232
Msa1083090 MtrunA17_Chr7g0234181 35.802 405 228 6 105 496 28 413 1.20e-69 229
Msa1083090 MtrunA17_Chr8g0353031 30.515 544 309 15 22 504 20 555 1.36e-69 233
Msa1083090 MtrunA17_Chr4g0059971 29.930 568 321 11 6 499 20 584 8.69e-69 232
Msa1083090 MtrunA17_Chr4g0014791 33.793 435 249 9 93 501 130 551 1.07e-68 231
Msa1083090 MtrunA17_Chr4g0014861 33.803 426 244 11 103 501 16 430 1.59e-68 227
Msa1083090 MtrunA17_Chr7g0234151 35.990 414 215 10 105 496 33 418 1.71e-68 226
Msa1083090 MtrunA17_Chr4g0011471 29.908 545 296 11 29 497 23 557 1.35e-67 228
Msa1083090 MtrunA17_Chr4g0014841 29.685 539 306 14 20 501 29 551 2.80e-67 227
Msa1083090 MtrunA17_Chr4g0014801 34.346 428 238 11 103 501 140 553 4.20e-67 226
Msa1083090 MtrunA17_Chr4g0059991 28.286 601 340 15 4 523 10 600 1.06e-66 226
Msa1083090 MtrunA17_Chr4g0014781 33.105 438 250 12 93 501 130 553 7.58e-66 223
Msa1083090 MtrunA17_Chr4g0059981 32.438 484 281 12 68 509 112 591 9.34e-65 221
Msa1083090 MtrunA17_Chr8g0390331 29.433 564 319 16 20 512 15 570 6.47e-64 219
Msa1083090 MtrunA17_Chr3g0142121 43.416 281 151 5 237 515 11 285 1.16e-63 209
Msa1083090 MtrunA17_Chr4g0014871 32.235 425 252 10 103 501 141 555 2.61e-63 216
Msa1083090 MtrunA17_Chr3g0077151 28.893 533 309 11 20 499 28 543 1.11e-62 214
Msa1083090 MtrunA17_Chr3g0112631 40.141 284 156 5 236 509 3 282 1.21e-61 204
Msa1083090 MtrunA17_Chr8g0362781 31.690 426 249 9 111 500 163 582 1.82e-60 209
Msa1083090 MtrunA17_Chr7g0240211 28.870 478 291 13 83 516 9 481 5.63e-59 203
Msa1083090 MtrunA17_Chr7g0235521 28.481 474 292 12 85 516 13 481 1.01e-58 202
Msa1083090 MtrunA17_Chr7g0240181 28.692 474 291 12 85 516 13 481 1.29e-58 202
Msa1083090 MtrunA17_Chr7g0240131 28.632 475 290 13 85 516 13 481 3.76e-58 201
Msa1083090 MtrunA17_Chr7g0240271 26.923 546 328 13 20 496 24 567 4.37e-58 203
Msa1083090 MtrunA17_Chr4g0060001 32.319 427 247 11 103 496 152 569 4.57e-58 203
Msa1083090 MtrunA17_Chr4g0011041 27.140 549 324 11 20 497 36 579 9.24e-58 202
Msa1083090 MtrunA17_Chr2g0331481 28.445 566 316 17 6 493 11 565 7.91e-56 198
Msa1083090 MtrunA17_Chr2g0331511 27.434 565 325 15 20 506 21 578 1.99e-54 194
Msa1083090 MtrunA17_Chr5g0415841 30.152 461 278 10 78 500 6 460 5.56e-54 189
Msa1083090 MtrunA17_Chr2g0331471 28.470 562 313 17 10 493 78 628 8.11e-54 193
Msa1083090 MtrunA17_Chr4g0003761 27.193 570 331 21 21 518 31 588 2.65e-53 190
Msa1083090 MtrunA17_Chr7g0240281 28.885 547 312 13 20 493 24 566 7.14e-53 189
Msa1083090 MtrunA17_Chr1g0157611 26.056 568 346 15 10 509 6 567 6.14e-52 186
Msa1083090 MtrunA17_Chr1g0147631 30.243 453 269 13 103 517 146 589 1.48e-51 185
Msa1083090 MtrunA17_Chr1g0177591 27.076 554 340 13 4 502 26 570 2.27e-51 184
Msa1083090 MtrunA17_Chr2g0325961 29.148 446 275 10 83 500 117 549 3.85e-51 183
Msa1083090 MtrunA17_Chr7g0240151 27.215 474 280 13 85 516 13 463 4.93e-51 181
Msa1083090 MtrunA17_Chr1g0177631 30.824 425 260 10 103 502 26 441 5.41e-51 181
Msa1083090 MtrunA17_Chr1g0177611 29.647 425 265 10 103 502 26 441 5.58e-51 181
Msa1083090 MtrunA17_Chr2g0325951 27.646 463 295 11 66 500 98 548 2.59e-50 181
Msa1083090 MtrunA17_Chr1g0157601 26.738 561 331 17 7 496 2 553 9.61e-50 180
Msa1083090 MtrunA17_Chr1g0157621 28.788 462 287 15 77 504 72 525 4.74e-49 178
Msa1083090 MtrunA17_Chr2g0326211 27.803 446 282 10 82 500 116 548 1.07e-48 177
Msa1083090 MtrunA17_Chr7g0261751 27.004 474 240 8 7 380 18 485 1.37e-48 176
Msa1083090 MtrunA17_Chr2g0331521 25.784 574 340 18 20 515 22 587 9.97e-48 175
Msa1083090 MtrunA17_Chr2g0331461 27.444 583 331 17 6 506 11 583 1.62e-45 169
Msa1083090 MtrunA17_Chr6g0451841 29.245 424 258 9 114 504 127 541 1.93e-43 162
Msa1083090 MtrunA17_Chr7g0261721 35.747 221 130 4 306 517 5 222 2.67e-36 135
Msa1083090 MtrunA17_Chr7g0261731 27.405 343 180 6 7 286 18 354 1.09e-33 131
Msa1083090 MtrunA17_Chr3g0142111 28.296 311 154 7 1 243 17 326 2.26e-29 118
Msa1083090 MtrunA17_Chr7g0261831 37.500 152 87 3 194 340 1 149 1.35e-25 104
Msa1083090 MtrunA17_Chr2g0326221 30.222 225 130 7 276 499 25 223 3.22e-19 86.7
Msa1083090 MtrunA17_Chr3g0112651 30.921 152 88 2 103 237 52 203 1.22e-18 84.7
Msa1083090 MtrunA17_Chr1g0147591 28.856 201 115 6 104 279 3 200 1.27e-18 84.3
Msa1083090 MtrunA17_Chr4g0060061 34.746 118 61 1 96 197 11 128 4.23e-15 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1083090 AT1G69850.1 36.441 590 276 11 7 505 4 585 2.65e-124 377
Msa1083090 AT1G59740.1 39.609 563 276 10 7 508 26 585 8.16e-123 373
Msa1083090 AT1G27040.1 37.798 545 268 10 20 500 25 562 2.72e-119 363
Msa1083090 AT1G27040.2 37.798 545 268 10 20 500 21 558 3.13e-119 363
Msa1083090 AT1G27040.3 38.330 527 254 10 38 500 11 530 5.04e-116 354
Msa1083090 AT1G33440.1 38.489 556 283 10 22 519 38 592 9.09e-115 353
Msa1083090 AT5G62730.1 36.300 573 287 11 1 502 23 588 3.00e-112 346
Msa1083090 AT5G62730.2 37.640 534 267 10 28 502 3 529 1.70e-110 339
Msa1083090 AT3G54140.1 33.211 545 296 10 20 499 22 563 9.84e-100 313
Msa1083090 AT3G54140.2 33.211 545 296 10 20 499 22 563 9.84e-100 313
Msa1083090 AT3G25280.1 35.753 551 261 15 6 496 4 521 4.49e-98 307
Msa1083090 AT2G02040.1 33.883 546 292 8 20 499 39 581 7.16e-97 306
Msa1083090 AT5G01180.2 32.537 544 300 8 20 499 23 563 7.85e-97 305
Msa1083090 AT5G01180.3 32.537 544 300 8 20 499 23 563 7.85e-97 305
Msa1083090 AT5G01180.1 32.537 544 300 8 20 499 23 563 7.85e-97 305
Msa1083090 AT3G25260.1 34.807 543 268 14 7 496 6 515 1.80e-94 297
Msa1083090 AT1G62200.1 33.271 532 281 8 20 485 50 573 1.78e-92 295
Msa1083090 AT1G68570.1 36.285 576 284 14 11 508 12 582 1.14e-91 293
Msa1083090 AT5G13400.1 32.327 563 302 10 22 508 64 623 2.16e-90 290
Msa1083090 AT2G26690.1 33.948 542 287 10 20 497 22 556 2.41e-89 286
Msa1083090 AT1G68570.2 36.000 550 272 12 34 508 8 552 1.71e-88 283
Msa1083090 AT2G26690.2 34.528 530 273 11 32 497 4 523 7.76e-88 281
Msa1083090 AT1G62200.2 31.729 561 280 9 20 485 50 602 8.69e-87 280
Msa1083090 AT2G26690.3 34.825 514 264 10 48 497 5 511 9.88e-87 278
Msa1083090 AT1G62200.3 31.729 561 280 9 20 485 64 616 1.40e-86 280
Msa1083090 AT2G37900.1 30.726 537 311 8 20 500 36 567 9.49e-85 274
Msa1083090 AT3G53960.1 31.676 543 306 11 20 500 35 574 6.02e-83 270
Msa1083090 AT2G37900.2 34.562 434 256 7 90 500 60 488 3.33e-82 265
Msa1083090 AT3G54450.1 32.358 547 309 13 20 509 10 552 4.83e-82 266
Msa1083090 AT3G21670.1 32.682 563 301 12 4 501 11 560 9.86e-82 266
Msa1083090 AT1G12110.1 32.162 569 311 13 20 518 25 588 1.12e-81 266
Msa1083090 AT2G40460.1 32.198 587 313 14 7 520 9 583 4.30e-80 262
Msa1083090 AT1G69870.1 32.174 575 308 12 20 516 49 619 7.00e-80 262
Msa1083090 AT2G02020.1 29.391 558 289 9 11 498 20 542 2.18e-76 251
Msa1083090 AT1G32450.1 30.070 572 311 14 20 516 35 592 3.62e-76 252
Msa1083090 AT4G21680.1 31.295 556 303 13 20 501 26 576 5.71e-73 243
Msa1083090 AT1G72140.1 34.444 450 233 11 87 500 130 553 1.04e-69 234
Msa1083090 AT5G46050.1 29.947 561 313 13 23 514 28 577 9.20e-68 229
Msa1083090 AT5G46050.2 33.260 454 260 10 90 514 26 465 2.95e-67 225
Msa1083090 AT5G19640.1 27.675 542 322 10 23 505 60 590 4.07e-67 228
Msa1083090 AT1G18880.1 33.402 485 278 12 69 512 99 579 7.75e-67 227
Msa1083090 AT1G72130.2 32.783 424 239 10 103 502 17 418 9.77e-67 222
Msa1083090 AT1G72130.3 32.783 424 239 10 103 502 17 418 9.77e-67 222
Msa1083090 AT1G27080.1 30.488 574 318 12 11 516 5 565 3.49e-66 225
Msa1083090 AT5G46040.1 28.265 559 327 10 20 511 25 576 1.09e-65 224
Msa1083090 AT1G72130.1 32.471 425 239 9 103 502 135 536 1.41e-65 222
Msa1083090 AT1G22550.1 33.333 432 244 10 100 503 148 563 1.51e-65 223
Msa1083090 AT1G27080.2 33.260 454 267 10 88 516 81 523 6.72e-64 218
Msa1083090 AT1G22570.2 34.339 431 239 9 103 503 111 527 1.08e-63 217
Msa1083090 AT1G22570.1 34.339 431 239 9 103 503 148 564 2.90e-63 217
Msa1083090 AT5G62680.1 32.025 484 280 14 65 504 119 597 1.36e-62 216
Msa1083090 AT1G72125.1 31.938 454 267 11 79 502 118 559 4.28e-62 214
Msa1083090 AT1G52190.1 28.952 563 312 20 8 490 6 560 4.77e-61 212
Msa1083090 AT1G69860.1 30.811 555 318 10 6 500 2 550 2.19e-60 209
Msa1083090 AT1G72120.1 31.330 466 275 11 67 503 107 556 8.49e-59 204
Msa1083090 AT2G02020.2 26.344 558 285 11 11 498 20 521 3.94e-58 202
Msa1083090 AT1G22540.1 33.713 439 247 10 93 504 136 557 9.91e-58 202
Msa1083090 AT3G45650.1 30.833 480 277 15 65 510 98 556 3.95e-57 200
Msa1083090 AT3G47960.1 30.146 481 293 12 65 505 137 614 1.09e-56 201
Msa1083090 AT5G28470.2 29.718 461 287 11 73 501 103 558 4.41e-56 197
Msa1083090 AT3G45660.1 30.128 468 274 13 78 514 112 557 2.15e-55 196
Msa1083090 AT3G45660.3 30.128 468 274 13 78 514 112 557 2.15e-55 196
Msa1083090 AT3G45660.2 29.979 467 276 12 78 514 133 578 2.98e-55 196
Msa1083090 AT3G45680.1 29.935 461 278 12 78 509 111 555 2.41e-53 190
Msa1083090 AT5G28470.1 29.501 461 286 12 73 501 103 556 3.20e-53 189
Msa1083090 AT3G45720.1 29.114 474 293 13 65 510 95 553 4.57e-53 189
Msa1083090 AT3G45710.1 27.557 479 301 13 65 512 97 560 1.69e-52 187
Msa1083090 AT3G45650.2 29.249 506 277 16 65 510 98 582 9.69e-52 186
Msa1083090 AT3G45700.1 28.728 456 289 10 78 513 107 546 4.19e-51 184
Msa1083090 AT3G16180.1 26.631 567 321 18 6 490 6 559 1.40e-49 180
Msa1083090 AT5G14940.1 25.310 565 329 14 20 509 5 551 9.71e-48 174
Msa1083090 AT3G45690.1 26.490 453 264 12 78 509 109 513 2.43e-45 167
Msa1083090 AT3G01350.1 23.986 567 333 16 20 504 5 555 6.19e-37 144
Msa1083090 AT5G11570.1 24.146 410 257 10 88 495 117 474 1.65e-27 116
Msa1083090 AT2G38100.2 23.832 428 272 13 103 498 79 484 7.58e-23 102
Msa1083090 AT2G38100.3 23.832 428 272 13 103 498 101 506 1.13e-22 102
Msa1083090 AT2G38100.1 23.832 428 272 13 103 498 95 500 1.53e-22 101

Find 148 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAACCCAATAAGCCTATTT+TGG 0.130669 7_2:-83313813 Msa1083090:CDS
ATGTAGTATTATTGATTATT+TGG 0.184601 7_2:-83312877 Msa1083090:three_prime_UTR
AATCTACTGGGCTTGAATTT+TGG 0.202975 7_2:+83313452 None:intergenic
GAAAGCCAAAATAGGCTTAT+TGG 0.206229 7_2:+83313808 None:intergenic
ACACACAAGATTGAAGATTT+TGG 0.232238 7_2:-83313351 Msa1083090:exon
CAGTAAATGAACCAAGTTTA+AGG 0.238647 7_2:+83314058 None:intergenic
AATAGGCTTATTGGGTTAGA+TGG 0.254065 7_2:+83313817 None:intergenic
ACTTTCTTGCTTTCCCTTGT+TGG 0.265399 7_2:-83316278 Msa1083090:intron
TATGATTGATTTGCTATTGT+TGG 0.269936 7_2:-83313187 Msa1083090:three_prime_UTR
GACTTGTTCTTATAGTTATA+AGG 0.282898 7_2:-83313119 Msa1083090:three_prime_UTR
GATTCACCTTGATTTGTAAT+TGG 0.290673 7_2:-83313086 Msa1083090:three_prime_UTR
GTAATTTGAACCTGTTCTAT+TGG 0.293896 7_2:-83313552 Msa1083090:CDS
ACAAAGAAAAGTTCATAAAT+TGG 0.296915 7_2:+83313982 None:intergenic
ATAACTATAGCTTCTTCTAT+TGG 0.302689 7_2:-83315726 Msa1083090:CDS
CTTGATTTCCCACATGCATT+TGG 0.310576 7_2:+83316002 None:intergenic
AAAGCCAAAATAGGCTTATT+GGG 0.316965 7_2:+83313809 None:intergenic
TTGGTGGGACAAAACAAAAT+TGG 0.317104 7_2:-83313396 Msa1083090:CDS
CAGGTGTTACTGGTGTTGTT+TGG 0.320066 7_2:-83315788 Msa1083090:CDS
TGTGCACACTTTCCATGGTT+GGG 0.320615 7_2:+83314206 None:intergenic
ATTGGAATGAAAGCCAAAAT+AGG 0.320896 7_2:+83313800 None:intergenic
AGAGAAAGAAAGGTGGATTC+AGG 0.324478 7_2:-83316537 Msa1083090:CDS
CTATTGGTAACATTCTTGTT+AGG 0.338130 7_2:+83314157 None:intergenic
ACTCTGGCAGTGACAGCTTT+CGG 0.358181 7_2:+83315034 None:intergenic
ACATGGTTATCAATGTCTAT+TGG 0.360224 7_2:-83313676 Msa1083090:CDS
CTCAATACCATGATGGTGTT+GGG 0.360781 7_2:-83312702 Msa1083090:three_prime_UTR
GAATGGATCAGTGGATGTTT+TGG 0.363166 7_2:-83313304 Msa1083090:three_prime_UTR
GGAGCAATTACAGGTGTTAC+TGG 0.364098 7_2:-83315798 Msa1083090:intron
GTTGTCAGCATTGGACAATA+TGG 0.372340 7_2:-83316402 Msa1083090:CDS
ATGATTGTGCTAGCTACTAT+TGG 0.377101 7_2:+83314141 None:intergenic
TGTAACCAACCTTGTTTACT+AGG 0.382595 7_2:+83313595 None:intergenic
AGGTGTTACTGGTGTTGTTT+GGG 0.383327 7_2:-83315787 Msa1083090:CDS
CAATACTCTCACAAACTTCA+TGG 0.386414 7_2:-83316306 Msa1083090:CDS
TGCAAACTCTTCAAATCTAC+TGG 0.389331 7_2:+83313439 None:intergenic
TTTACTAGGAGTAATCCTTT+TGG 0.389563 7_2:+83313609 None:intergenic
TGATTTGCTATTGTTGGCTC+TGG 0.390594 7_2:-83313181 Msa1083090:three_prime_UTR
ACATTGTTGGCATTGGGAAT+AGG 0.397725 7_2:-83315936 Msa1083090:CDS
TGCTGACCAATTTGAAGAAA+AGG 0.400066 7_2:-83315883 Msa1083090:CDS
GTTCACACTTGTGGGACTCT+TGG 0.401591 7_2:-83313752 Msa1083090:CDS
GGCTTTGTCACACTTGCTCT+TGG 0.401789 7_2:-83315705 Msa1083090:CDS
TACACAAAGAGCTTGGCATT+GGG 0.407882 7_2:-83315760 Msa1083090:CDS
ATCACTGACATTGTTGGCAT+TGG 0.413030 7_2:-83315943 Msa1083090:CDS
AGTTGTGTGAAAGGTGGAAT+AGG 0.413397 7_2:-83315981 Msa1083090:CDS
AAAATCACCAACCACCCTTC+AGG 0.414052 7_2:-83313946 Msa1083090:CDS
AAAATGCTTATGAAAATAAG+AGG 0.426769 7_2:+83314009 None:intergenic
GCTGATATGTTCACACTTGT+GGG 0.431062 7_2:-83313760 Msa1083090:CDS
AGAGGATCTATGACTGCATT+TGG 0.431468 7_2:-83315906 Msa1083090:CDS
AGTAAACAAGGTTGGTTACA+TGG 0.442459 7_2:-83313592 Msa1083090:CDS
AACTCAAGCTTCTCACTGAA+TGG 0.442712 7_2:-83316561 Msa1083090:CDS
GTGCACACTTTCCATGGTTG+GGG 0.442765 7_2:+83314207 None:intergenic
CTGATTGTGGGGCTATCTGC+TGG 0.445119 7_2:+83315657 None:intergenic
TTACACATCACTGACATTGT+TGG 0.446683 7_2:-83315949 Msa1083090:CDS
TATAGCGTGAGGCCCAATAA+AGG 0.448411 7_2:+83313491 None:intergenic
TGATTAATGTTGTTACCAAA+AGG 0.448983 7_2:-83313624 Msa1083090:CDS
TCACTGACATTGTTGGCATT+GGG 0.450521 7_2:-83315942 Msa1083090:CDS
TGGTGGGACAAAACAAAATT+GGG 0.452142 7_2:-83313395 Msa1083090:CDS
CTGTGCACACTTTCCATGGT+TGG 0.453175 7_2:+83314205 None:intergenic
GTTATATCAATGACAGTGGC+TGG 0.454419 7_2:-83313880 Msa1083090:CDS
ACCTGAGCAATTCTGATTGT+GGG 0.454685 7_2:+83315645 None:intergenic
ATTGGACAATATGGGATTTG+TGG 0.458958 7_2:-83316393 Msa1083090:CDS
TTGTCAGCATTGGACAATAT+GGG 0.463205 7_2:-83316401 Msa1083090:CDS
CATGAAGTTTGTGAGAGTAT+TGG 0.463423 7_2:+83316307 None:intergenic
GACAATGATTTCATACTTGA+AGG 0.463900 7_2:+83313709 None:intergenic
CTAATCCAACACCTACCCTT+TGG 0.475526 7_2:+83313911 None:intergenic
GTACACAAAGAGCTTGGCAT+TGG 0.480459 7_2:-83315761 Msa1083090:CDS
TAGCTAGGAACCAATAGAAC+AGG 0.487586 7_2:+83313542 None:intergenic
GTCACTGTGCACACTTTCCA+TGG 0.487591 7_2:+83314201 None:intergenic
TAACAACCAATTACAAATCA+AGG 0.489525 7_2:+83313080 None:intergenic
TATAGTTCTTCGTGTGACTC+TGG 0.493826 7_2:+83315018 None:intergenic
GTGAGAGTATTGGCAGAACT+TGG 0.496595 7_2:+83316317 None:intergenic
TGATGTAGTGTTGTCAGCAT+TGG 0.504753 7_2:-83316411 Msa1083090:intron
CCCCACAATCAGAATTGCTC+AGG 0.505394 7_2:-83315646 Msa1083090:intron
ATGACAGGAATTGAAGATGC+TGG 0.513570 7_2:+83314033 None:intergenic
TGCTGATATGTTCACACTTG+TGG 0.513661 7_2:-83313761 Msa1083090:CDS
TCCTATAAGAAAATCCGAAA+AGG 0.516352 7_2:-83312767 Msa1083090:three_prime_UTR
ATAGGCTTATTGGGTTAGAT+GGG 0.520204 7_2:+83313818 None:intergenic
ACTGAATGGAAGAGAAAGAA+AGG 0.522276 7_2:-83316547 Msa1083090:CDS
CACGTTCAAAAGAGATTAGA+AGG 0.523065 7_2:-83312840 Msa1083090:three_prime_UTR
TGGAGTTGTGTGATTCCTGA+AGG 0.524331 7_2:+83313931 None:intergenic
GACCTGAGCAATTCTGATTG+TGG 0.524605 7_2:+83315644 None:intergenic
TTGACTACAGGTTATTGTTG+TGG 0.527192 7_2:-83315067 Msa1083090:intron
CAAAATTGGGAAGGTAGCAT+TGG 0.528176 7_2:-83313382 Msa1083090:CDS
TTGGGAATAGGAGGGGTAAG+AGG 0.528722 7_2:-83315924 Msa1083090:CDS
TCTCAATACCATGATGGTGT+TGG 0.533598 7_2:-83312703 Msa1083090:three_prime_UTR
TTGTTGGCATTGGGAATAGG+AGG 0.534414 7_2:-83315933 Msa1083090:CDS
GAGAAAGAAAGGTGGATTCA+GGG 0.534643 7_2:-83316536 Msa1083090:CDS
GAAATGCCTCTCAAAATGAT+TGG 0.534664 7_2:-83313415 Msa1083090:CDS
AATTGGGAAGGTAGCATTGG+CGG 0.536450 7_2:-83313379 Msa1083090:CDS
TTCTTACCCCAACACCATCA+TGG 0.537163 7_2:+83312695 None:intergenic
TGTGATTCCTGAAGGGTGGT+TGG 0.538574 7_2:+83313939 None:intergenic
GGATAGTAGAAGTCAAAAGA+AGG 0.541593 7_2:-83313858 Msa1083090:CDS
AATACTCTCACAAACTTCAT+GGG 0.541870 7_2:-83316305 Msa1083090:CDS
ATGAAAATAAGAGGGATGAC+AGG 0.544308 7_2:+83314018 None:intergenic
TATGGGATTTGTGGCAAACA+TGG 0.549979 7_2:-83316384 Msa1083090:CDS
AGGAATCACACAACTCCAAA+GGG 0.550522 7_2:-83313926 Msa1083090:CDS
CATTGTCAACATCTTTCACA+TGG 0.551140 7_2:-83313693 Msa1083090:CDS
TAAGACAACTAAGTATAGCT+AGG 0.551925 7_2:+83313527 None:intergenic
AATGTAATGAACCTTAAACT+TGG 0.555453 7_2:-83314069 Msa1083090:CDS
GGGTTAGTACACAAAGAGCT+TGG 0.556525 7_2:-83315767 Msa1083090:CDS
GCACAGGGTGGAGACAAGAA+TGG 0.559872 7_2:-83313326 Msa1083090:three_prime_UTR
TGCCTCTCAAAATGATTGGT+GGG 0.560324 7_2:-83313411 Msa1083090:CDS
TATGAAATAAGTGACAAAGA+TGG 0.563332 7_2:-83314997 Msa1083090:CDS
GTAAACAAGGTTGGTTACAT+GGG 0.568847 7_2:-83313591 Msa1083090:CDS
GATTAGAAGGCCTACCACCT+TGG 0.570156 7_2:-83312827 Msa1083090:three_prime_UTR
GGAGTTGTGTGATTCCTGAA+GGG 0.578116 7_2:+83313932 None:intergenic
GGAGATGAAGCCACCAACAA+GGG 0.578590 7_2:+83316265 None:intergenic
TGAAGAAAAGGATCCAAATG+AGG 0.582440 7_2:-83315871 Msa1083090:CDS
CATTTACATCCAAATGCATG+TGG 0.585392 7_2:-83316011 Msa1083090:CDS
CGGAGATGAAGCCACCAACA+AGG 0.586899 7_2:+83316264 None:intergenic
TGGGAAGGTAGCATTGGCGG+TGG 0.587563 7_2:-83313376 Msa1083090:CDS
AAGTATTATTCCAAGGTGGT+AGG 0.591663 7_2:+83312817 None:intergenic
TATAATACAGGCAGATCAAG+AGG 0.592502 7_2:-83316593 Msa1083090:intron
ACATAATAAAACCCCAACCA+TGG 0.593128 7_2:-83314218 Msa1083090:CDS
GGGTGGAGACAAGAATGGAA+TGG 0.594796 7_2:-83313321 Msa1083090:three_prime_UTR
ATGAATGAAGTATTATTCCA+AGG 0.596397 7_2:+83312810 None:intergenic
ATGCCTCTCAAAATGATTGG+TGG 0.598025 7_2:-83313412 Msa1083090:CDS
CAAACATTCTCAGTACAACA+AGG 0.598538 7_2:-83314093 Msa1083090:CDS
CAGGAATCACACAACTCCAA+AGG 0.601675 7_2:-83313927 Msa1083090:CDS
TTATATCAATGACAGTGGCT+GGG 0.603546 7_2:-83313879 Msa1083090:CDS
CAACTCCAAAGGGTAGGTGT+TGG 0.605425 7_2:-83313916 Msa1083090:CDS
TCAATACCATGATGGTGTTG+GGG 0.605805 7_2:-83312701 Msa1083090:three_prime_UTR
TTGTTCACACAAAACAAATG+AGG 0.607159 7_2:-83314960 Msa1083090:intron
AGAGAATCTCAATACCATGA+TGG 0.607310 7_2:-83312709 Msa1083090:three_prime_UTR
TTACTCCTAGTAAACAAGGT+TGG 0.608066 7_2:-83313600 Msa1083090:CDS
AGGATTACTCCTAGTAAACA+AGG 0.609632 7_2:-83313604 Msa1083090:CDS
ACACAAAGAGCTTGGCATTG+GGG 0.612368 7_2:-83315759 Msa1083090:CDS
GATAGTAGAAGTCAAAAGAA+GGG 0.613561 7_2:-83313857 Msa1083090:CDS
AGATTTGTACTTATAGCGTG+AGG 0.615212 7_2:+83313480 None:intergenic
GTTGGCATTGGGAATAGGAG+GGG 0.621646 7_2:-83315931 Msa1083090:CDS
TGTTGGCATTGGGAATAGGA+GGG 0.626274 7_2:-83315932 Msa1083090:CDS
CCTGAGCAATTCTGATTGTG+GGG 0.627004 7_2:+83315646 None:intergenic
GTTGTGTGATTCCTGAAGGG+TGG 0.628023 7_2:+83313935 None:intergenic
GAATGGAAGAGAAAGAAAGG+TGG 0.633493 7_2:-83316544 Msa1083090:CDS
ACAAGAATGGAATGGATCAG+TGG 0.635930 7_2:-83313313 Msa1083090:three_prime_UTR
GCAAACTCTTCAAATCTACT+GGG 0.636671 7_2:+83313440 None:intergenic
AAATGCTTATGAAAATAAGA+GGG 0.637493 7_2:+83314010 None:intergenic
GAGATTCTCTTAAACTACCG+TGG 0.637495 7_2:+83312722 None:intergenic
AAATCAAGTTGTGTGAAAGG+TGG 0.639042 7_2:-83315987 Msa1083090:CDS
GGGAAATCAAGTTGTGTGAA+AGG 0.644229 7_2:-83315990 Msa1083090:CDS
ATCAGTTATATCAATGACAG+TGG 0.660619 7_2:-83313884 Msa1083090:CDS
TAACAAGTAACAACACACAA+TGG 0.664958 7_2:-83312996 Msa1083090:three_prime_UTR
GGGACAAAACAAAATTGGGA+AGG 0.670442 7_2:-83313391 Msa1083090:CDS
ATTTACATCCAAATGCATGT+GGG 0.671883 7_2:-83316010 Msa1083090:CDS
AGTACATAGTAGCAATCTCG+TGG 0.675873 7_2:+83313258 None:intergenic
AAGTGACAAAGATGGAACAG+TGG 0.681162 7_2:-83314989 Msa1083090:CDS
AAACATTCTCAGTACAACAA+GGG 0.685525 7_2:-83314092 Msa1083090:CDS
ATGAAGTAATGTCAATACCA+CGG 0.691362 7_2:-83312739 Msa1083090:three_prime_UTR
ATCACACAACTCCAAAGGGT+AGG 0.702036 7_2:-83313922 Msa1083090:CDS
AATGAAGTATTATTCCAAGG+TGG 0.712643 7_2:+83312813 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCAAAAGATTTTATAAATA+AGG - chr7_2:83312709-83312728 Msa1083090:three_prime_UTR 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr7_2:83313112-83313131 Msa1083090:three_prime_UTR 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr7_2:83313113-83313132 Msa1083090:three_prime_UTR 10.0%
!!! AGATATTTTTTTTTAGAAAA+TGG - chr7_2:83313246-83313265 Msa1083090:three_prime_UTR 10.0%
!!! GATATTTTTTTTTAGAAAAT+GGG - chr7_2:83313247-83313266 Msa1083090:three_prime_UTR 10.0%
!!! ATTTTTATTTTTTACTGTTT+TGG - chr7_2:83313717-83313736 Msa1083090:CDS 10.0%
!! TTAAGTAATTACAAAAATTT+AGG + chr7_2:83315432-83315451 None:intergenic 10.0%
!!! TAAGAAAAAAGTATAAATAA+AGG - chr7_2:83315790-83315809 Msa1083090:intron 10.0%
!!! AAGAAAAAAGTATAAATAAA+GGG - chr7_2:83315791-83315810 Msa1083090:intron 10.0%
!!! AAAGATTTTATAAATAAGGA+TGG - chr7_2:83312713-83312732 Msa1083090:three_prime_UTR 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr7_2:83313114-83313133 Msa1083090:three_prime_UTR 15.0%
!! TAATTAAGAGCAAAATAATT+AGG - chr7_2:83313327-83313346 Msa1083090:three_prime_UTR 15.0%
!!! AGCTTAGTTTTATATTTTTA+TGG - chr7_2:83314239-83314258 Msa1083090:CDS 15.0%
!! AGTTGAAATTAATTAATGTA+TGG + chr7_2:83315109-83315128 None:intergenic 15.0%
!! TTCATTTACTAATTGTTTAA+TGG + chr7_2:83315340-83315359 None:intergenic 15.0%
!! TTAGTAAATGAATGTTAATA+AGG - chr7_2:83315348-83315367 Msa1083090:intron 15.0%
!! AAAATTGTGTCAATTAAATT+GGG + chr7_2:83315755-83315774 None:intergenic 15.0%
!!! AGAAAAAAGTATAAATAAAG+GGG - chr7_2:83315792-83315811 Msa1083090:intron 15.0%
!! AAAGTAGAATATATTGTATT+GGG - chr7_2:83315815-83315834 Msa1083090:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr7_2:83315858-83315877 Msa1083090:CDS 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr7_2:83315859-83315878 Msa1083090:CDS 15.0%
!!! TTGAAATAGATTAGTTATTT+TGG - chr7_2:83315905-83315924 Msa1083090:CDS 15.0%
!!! TGAAATAGATTAGTTATTTT+GGG - chr7_2:83315906-83315925 Msa1083090:CDS 15.0%
!!! ATGTAGTATTATTGATTATT+TGG - chr7_2:83317721-83317740 Msa1083090:intron 15.0%
!!! TCATTCATCATTTTTAATTA+AGG - chr7_2:83317803-83317822 Msa1083090:intron 15.0%
!!! TTTTATAAATAAGGATGGAT+AGG - chr7_2:83312718-83312737 Msa1083090:three_prime_UTR 20.0%
!! AACAAAATTGTGTCAATTAA+CGG + chr7_2:83313080-83313099 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr7_2:83313137-83313156 Msa1083090:three_prime_UTR 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - chr7_2:83313210-83313229 Msa1083090:three_prime_UTR 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - chr7_2:83313211-83313230 Msa1083090:three_prime_UTR 20.0%
!! AGCATATATATCAAATAAAG+TGG - chr7_2:83313616-83313635 Msa1083090:CDS 20.0%
!! GCATATATATCAAATAAAGT+GGG - chr7_2:83313617-83313636 Msa1083090:CDS 20.0%
!! CATATATATCAAATAAAGTG+GGG - chr7_2:83313618-83313637 Msa1083090:CDS 20.0%
!! AGTTTCAAATCTTATAATAC+AGG - chr7_2:83313993-83314012 Msa1083090:CDS 20.0%
!! AAAAAAACTAAACTCTTTGT+TGG - chr7_2:83314114-83314133 Msa1083090:CDS 20.0%
!! GAATCTATTTAAGTAAGTAT+CGG + chr7_2:83314357-83314376 None:intergenic 20.0%
!! ATTAGTATCTTAACATTTGT+AGG - chr7_2:83314529-83314548 Msa1083090:intron 20.0%
!! AAAGACTAAACAATATTACT+TGG + chr7_2:83315045-83315064 None:intergenic 20.0%
!! TAAACAACTGAAATTAAACA+AGG - chr7_2:83315142-83315161 Msa1083090:intron 20.0%
!! AAACAACTGAAATTAAACAA+GGG - chr7_2:83315143-83315162 Msa1083090:intron 20.0%
!!! TCATGAAAACTTACTTATTT+TGG - chr7_2:83315275-83315294 Msa1083090:intron 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG + chr7_2:83315756-83315775 None:intergenic 20.0%
!! GAAAGTAGAATATATTGTAT+TGG - chr7_2:83315814-83315833 Msa1083090:intron 20.0%
!!! AACATTTTAATATGCATGTT+TGG + chr7_2:83316311-83316330 None:intergenic 20.0%
!! ACATGCATATTAAAATGTTA+TGG - chr7_2:83316312-83316331 Msa1083090:CDS 20.0%
!! AAATGCTTATGAAAATAAGA+GGG + chr7_2:83316591-83316610 None:intergenic 20.0%
!! AAAATGCTTATGAAAATAAG+AGG + chr7_2:83316592-83316611 None:intergenic 20.0%
!!! TCTTATTTTCATAAGCATTT+TGG - chr7_2:83316591-83316610 Msa1083090:intron 20.0%
!! ACAAAGAAAAGTTCATAAAT+TGG + chr7_2:83316619-83316638 None:intergenic 20.0%
!!! ACTCTTGGAATTTTTTTATA+GGG - chr7_2:83316861-83316880 Msa1083090:intron 20.0%
!!! ATTTTTTCAACTACCTTTAT+TGG - chr7_2:83317094-83317113 Msa1083090:intron 20.0%
!!! TTTTTTCAACTACCTTTATT+GGG - chr7_2:83317095-83317114 Msa1083090:intron 20.0%
!!! ATCTTGTTTTCAGATTTTAA+AGG - chr7_2:83317444-83317463 Msa1083090:intron 20.0%
!!! TTCATCATTTTTAATTAAGG+TGG - chr7_2:83317806-83317825 Msa1083090:intron 20.0%
!! TTATAGTAGTTTTCTTGCAA+AGG + chr7_2:83312858-83312877 None:intergenic 25.0%
!!! AAGGTTGAAACTTGTTTTTT+TGG + chr7_2:83312912-83312931 None:intergenic 25.0%
! ATCATGATACATAAGATTGT+AGG + chr7_2:83312938-83312957 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr7_2:83313136-83313155 Msa1083090:three_prime_UTR 25.0%
! GTAGCATCAATATGATTAAT+TGG + chr7_2:83313443-83313462 None:intergenic 25.0%
!! AAAGACTGGTTATAGAAATT+TGG + chr7_2:83313491-83313510 None:intergenic 25.0%
! AATGAGTCAAATTGAAAGAA+AGG + chr7_2:83313515-83313534 None:intergenic 25.0%
! ATCAATCAAACCAAACATAT+AGG + chr7_2:83313646-83313665 None:intergenic 25.0%
! TGGATTTGAAAATACGAAAA+AGG - chr7_2:83313737-83313756 Msa1083090:CDS 25.0%
! AATAGTAAGTTCAAATGGAA+TGG + chr7_2:83313873-83313892 None:intergenic 25.0%
! ACAAGAATAGTAAGTTCAAA+TGG + chr7_2:83313878-83313897 None:intergenic 25.0%
! AAACTCATCAAATATATGCA+TGG + chr7_2:83313978-83313997 None:intergenic 25.0%
! ATAACTATAGCTTCTTCTAT+TGG - chr7_2:83314872-83314891 Msa1083090:intron 25.0%
!! TGTATGGTACTTTTACAATA+GGG + chr7_2:83315093-83315112 None:intergenic 25.0%
!! ATGTATGGTACTTTTACAAT+AGG + chr7_2:83315094-83315113 None:intergenic 25.0%
!! TAACATACTTTATTGACTAC+AGG - chr7_2:83315519-83315538 Msa1083090:intron 25.0%
! TATGAAATAAGTGACAAAGA+TGG - chr7_2:83315601-83315620 Msa1083090:intron 25.0%
!!! GGACACTTTTTTTAGAAAAT+GGG - chr7_2:83315927-83315946 Msa1083090:CDS 25.0%
! TGTGTTTAGCAATTTATACA+CGG + chr7_2:83315970-83315989 None:intergenic 25.0%
!!! GGTTTTATTATGTATTCTTG+GGG + chr7_2:83316373-83316392 None:intergenic 25.0%
!!! GGGTTTTATTATGTATTCTT+GGG + chr7_2:83316374-83316393 None:intergenic 25.0%
! AATGTAATGAACCTTAAACT+TGG - chr7_2:83316529-83316548 Msa1083090:CDS 25.0%
!!! GACTCTTGGAATTTTTTTAT+AGG - chr7_2:83316860-83316879 Msa1083090:intron 25.0%
! TGATTAATGTTGTTACCAAA+AGG - chr7_2:83316974-83316993 Msa1083090:intron 25.0%
!! ATGTACTAAGTTTTTGATAG+TGG - chr7_2:83317356-83317375 Msa1083090:intron 25.0%
!!! TATGATTGATTTGCTATTGT+TGG - chr7_2:83317411-83317430 Msa1083090:intron 25.0%
! AAGAACAAGTCAAAAAAAGA+AGG + chr7_2:83317470-83317489 None:intergenic 25.0%
!! GACTTGTTCTTATAGTTATA+AGG - chr7_2:83317479-83317498 Msa1083090:intron 25.0%
! TAACAACCAATTACAAATCA+AGG + chr7_2:83317521-83317540 None:intergenic 25.0%
!! ATGAATGAAGTATTATTCCA+AGG + chr7_2:83317791-83317810 None:intergenic 25.0%
!! TTACTTCATTCTAACCTTTT+CGG + chr7_2:83317848-83317867 None:intergenic 25.0%
TCAGCTTCATAGAAATGAAT+GGG - chr7_2:83312772-83312791 Msa1083090:three_prime_UTR 30.0%
TACATAAGATTGTAGGACTA+AGG + chr7_2:83312931-83312950 None:intergenic 30.0%
AAAATTGTGTCAATTAACGG+AGG + chr7_2:83313077-83313096 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr7_2:83313121-83313140 Msa1083090:three_prime_UTR 30.0%
ATTGAAAGAAAGGAAAAGAC+TGG + chr7_2:83313505-83313524 None:intergenic 30.0%
TTGAAAATACGAAAAAGGTG+AGG - chr7_2:83313742-83313761 Msa1083090:CDS 30.0%
AACTCTCATTATCTCTACAA+TGG - chr7_2:83313908-83313927 Msa1083090:CDS 30.0%
TCATTATCTCTACAATGGTA+AGG - chr7_2:83313913-83313932 Msa1083090:CDS 30.0%
CAAATATATGCATGGAAACA+AGG + chr7_2:83313970-83313989 None:intergenic 30.0%
!! AGGGCTTCTATGTTTATTTT+TGG - chr7_2:83314081-83314100 Msa1083090:CDS 30.0%
AATACTCTCACAAACTTCAT+GGG - chr7_2:83314293-83314312 Msa1083090:intron 30.0%
ATCTTAACATTTGTAGGCTT+TGG - chr7_2:83314535-83314554 Msa1083090:intron 30.0%
ATTTACATCCAAATGCATGT+GGG - chr7_2:83314588-83314607 Msa1083090:intron 30.0%
! TTGGATCCTTTTCTTCAAAT+TGG + chr7_2:83314724-83314743 None:intergenic 30.0%
!!! CACTTGCAAGTTTTTTCAAT+TGG - chr7_2:83314756-83314775 Msa1083090:intron 30.0%
!!! GGAGTTTTGATTCTATAGAA+AGG + chr7_2:83314923-83314942 None:intergenic 30.0%
AGTCTTTGTACATACTTTAG+TGG - chr7_2:83315058-83315077 Msa1083090:CDS 30.0%
TAATAAGGTCAATATCTGCT+AGG - chr7_2:83315363-83315382 Msa1083090:intron 30.0%
!!! TGCATGCTTTTTTAATCTCT+AGG - chr7_2:83315402-83315421 Msa1083090:intron 30.0%
TTGTTCACACAAAACAAATG+AGG - chr7_2:83315638-83315657 Msa1083090:intron 30.0%
!! TTTGAGTTGAGTATGAATGA+AGG + chr7_2:83315679-83315698 None:intergenic 30.0%
TTGTGTCAATTAAATTGGGA+CGG + chr7_2:83315751-83315770 None:intergenic 30.0%
!!! GGGACACTTTTTTTAGAAAA+TGG - chr7_2:83315926-83315945 Msa1083090:CDS 30.0%
! CCTAAGTTGCATATTTTTCA+GGG + chr7_2:83316088-83316107 None:intergenic 30.0%
CCTGAAAAATATGCAACTTA+GGG - chr7_2:83316086-83316105 Msa1083090:intron 30.0%
AACAAAAAACGAAGCTACAA+AGG + chr7_2:83316127-83316146 None:intergenic 30.0%
!!! ATCTGTCACTTTCATTTTTC+AGG - chr7_2:83316170-83316189 Msa1083090:intron 30.0%
TATATATGAAGCTGCATAAG+TGG + chr7_2:83316209-83316228 None:intergenic 30.0%
!! ATGTTATGGTTTGTTGAATC+AGG - chr7_2:83316326-83316345 Msa1083090:CDS 30.0%
!!! GGGGTTTTATTATGTATTCT+TGG + chr7_2:83316375-83316394 None:intergenic 30.0%
! CTATTGGTAACATTCTTGTT+AGG + chr7_2:83316444-83316463 None:intergenic 30.0%
AAACATTCTCAGTACAACAA+GGG - chr7_2:83316506-83316525 Msa1083090:intron 30.0%
CAGTAAATGAACCAAGTTTA+AGG + chr7_2:83316543-83316562 None:intergenic 30.0%
!! TTGGTGATTTTTCTTGCAAA+TGG + chr7_2:83316643-83316662 None:intergenic 30.0%
ATCAGTTATATCAATGACAG+TGG - chr7_2:83316714-83316733 Msa1083090:intron 30.0%
GATAGTAGAAGTCAAAAGAA+GGG - chr7_2:83316741-83316760 Msa1083090:intron 30.0%
AAAGCCAAAATAGGCTTATT+GGG + chr7_2:83316792-83316811 None:intergenic 30.0%
ATTGGAATGAAAGCCAAAAT+AGG + chr7_2:83316801-83316820 None:intergenic 30.0%
!!! TTTTGGCTTTCATTCCAATA+TGG - chr7_2:83316802-83316821 Msa1083090:intron 30.0%
! TCATTCCAATATGGCATTTT+TGG - chr7_2:83316811-83316830 Msa1083090:intron 30.0%
CAATACCAAAAATGCCATAT+TGG + chr7_2:83316819-83316838 None:intergenic 30.0%
GACAATGATTTCATACTTGA+AGG + chr7_2:83316892-83316911 None:intergenic 30.0%
ACATGGTTATCAATGTCTAT+TGG - chr7_2:83316922-83316941 Msa1083090:intron 30.0%
! TTTACTAGGAGTAATCCTTT+TGG + chr7_2:83316992-83317011 None:intergenic 30.0%
GTAATTTGAACCTGTTCTAT+TGG - chr7_2:83317046-83317065 Msa1083090:intron 30.0%
TAAGACAACTAAGTATAGCT+AGG + chr7_2:83317074-83317093 None:intergenic 30.0%
! ACACACAAGATTGAAGATTT+TGG - chr7_2:83317247-83317266 Msa1083090:intron 30.0%
!! GATTCACCTTGATTTGTAAT+TGG - chr7_2:83317512-83317531 Msa1083090:intron 30.0%
TAACAAGTAACAACACACAA+TGG - chr7_2:83317602-83317621 Msa1083090:intron 30.0%
! AATGAAGTATTATTCCAAGG+TGG + chr7_2:83317788-83317807 None:intergenic 30.0%
TCCTATAAGAAAATCCGAAA+AGG - chr7_2:83317831-83317850 Msa1083090:intron 30.0%
! ACCTTTTCGGATTTTCTTAT+AGG + chr7_2:83317835-83317854 None:intergenic 30.0%
ATGAAGTAATGTCAATACCA+CGG - chr7_2:83317859-83317878 Msa1083090:intron 30.0%
GTCAGCTTCATAGAAATGAA+TGG - chr7_2:83312771-83312790 Msa1083090:three_prime_UTR 35.0%
AATGAATGGGTGACTTTATG+TGG - chr7_2:83312785-83312804 Msa1083090:three_prime_UTR 35.0%
CAGAATTTCCATGAGTATGA+AGG + chr7_2:83312813-83312832 None:intergenic 35.0%
CTTCATACTCATGGAAATTC+TGG - chr7_2:83312811-83312830 Msa1083090:three_prime_UTR 35.0%
AGAAAATGGGTCAGTTATTC+TGG - chr7_2:83313260-83313279 Msa1083090:three_prime_UTR 35.0%
GAAAATGGGTCAGTTATTCT+GGG - chr7_2:83313261-83313280 Msa1083090:three_prime_UTR 35.0%
ATAATTAGGTAACCACGTGA+TGG - chr7_2:83313341-83313360 Msa1083090:exon 35.0%
! ACTGAAAGCTTCATGGTTTT+AGG - chr7_2:83313541-83313560 Msa1083090:CDS 35.0%
ATAGTGTGTGATAAGTAGCA+TGG - chr7_2:83313790-83313809 Msa1083090:CDS 35.0%
CTCAAAATTGTTTGCCTCTA+TGG + chr7_2:83313833-83313852 None:intergenic 35.0%
TATAATACAGGCAGATCAAG+AGG - chr7_2:83314005-83314024 Msa1083090:CDS 35.0%
ACTGAATGGAAGAGAAAGAA+AGG - chr7_2:83314051-83314070 Msa1083090:CDS 35.0%
! TTGTCAGCATTGGACAATAT+GGG - chr7_2:83314197-83314216 Msa1083090:CDS 35.0%
ATTGGACAATATGGGATTTG+TGG - chr7_2:83314205-83314224 Msa1083090:CDS 35.0%
! CATGAAGTTTGTGAGAGTAT+TGG + chr7_2:83314294-83314313 None:intergenic 35.0%
CAATACTCTCACAAACTTCA+TGG - chr7_2:83314292-83314311 Msa1083090:intron 35.0%
!! TTTTGGATCTCTAGAAGTTC+TGG - chr7_2:83314391-83314410 Msa1083090:intron 35.0%
GTGTCTATGCTTCATAGTTT+AGG + chr7_2:83314422-83314441 None:intergenic 35.0%
AAACTATGAAGCATAGACAC+CGG - chr7_2:83314422-83314441 Msa1083090:intron 35.0%
CATTTACATCCAAATGCATG+TGG - chr7_2:83314587-83314606 Msa1083090:intron 35.0%
! AAATCAAGTTGTGTGAAAGG+TGG - chr7_2:83314611-83314630 Msa1083090:intron 35.0%
TTACACATCACTGACATTGT+TGG - chr7_2:83314649-83314668 Msa1083090:intron 35.0%
TGCTGACCAATTTGAAGAAA+AGG - chr7_2:83314715-83314734 Msa1083090:intron 35.0%
TGAAGAAAAGGATCCAAATG+AGG - chr7_2:83314727-83314746 Msa1083090:intron 35.0%
! CTTTTGCTTAGTTCAACACT+TGG - chr7_2:83314779-83314798 Msa1083090:intron 35.0%
!! TGTACATACTTTAGTGGACT+TGG - chr7_2:83315064-83315083 Msa1083090:intron 35.0%
TTGACTACAGGTTATTGTTG+TGG - chr7_2:83315531-83315550 Msa1083090:intron 35.0%
ATGAATGAAGGAAGATTGGA+AGG + chr7_2:83315667-83315686 None:intergenic 35.0%
GAGTATGAATGAAGGAAGAT+TGG + chr7_2:83315671-83315690 None:intergenic 35.0%
! AGTTTTCTGACATAACCAAG+AGG - chr7_2:83316006-83316025 Msa1083090:CDS 35.0%
TGTTCTTTATCATCACCTCT+TGG + chr7_2:83316024-83316043 None:intergenic 35.0%
CCCTGAAAAATATGCAACTT+AGG - chr7_2:83316085-83316104 Msa1083090:intron 35.0%
! CCCTAAGTTGCATATTTTTC+AGG + chr7_2:83316089-83316108 None:intergenic 35.0%
AAAAAACGAAGCTACAAAGG+TGG + chr7_2:83316124-83316143 None:intergenic 35.0%
ACATAATAAAACCCCAACCA+TGG - chr7_2:83316380-83316399 Msa1083090:CDS 35.0%
ATGATTGTGCTAGCTACTAT+TGG + chr7_2:83316460-83316479 None:intergenic 35.0%
CAAACATTCTCAGTACAACA+AGG - chr7_2:83316505-83316524 Msa1083090:intron 35.0%
ATGAAAATAAGAGGGATGAC+AGG + chr7_2:83316583-83316602 None:intergenic 35.0%
TTATATCAATGACAGTGGCT+GGG - chr7_2:83316719-83316738 Msa1083090:intron 35.0%
GGATAGTAGAAGTCAAAAGA+AGG - chr7_2:83316740-83316759 Msa1083090:intron 35.0%
! TAGATGGGTCTTTTCTACTT+TGG + chr7_2:83316768-83316787 None:intergenic 35.0%
! ATAGGCTTATTGGGTTAGAT+GGG + chr7_2:83316783-83316802 None:intergenic 35.0%
! AATAGGCTTATTGGGTTAGA+TGG + chr7_2:83316784-83316803 None:intergenic 35.0%
! CTAACCCAATAAGCCTATTT+TGG - chr7_2:83316785-83316804 Msa1083090:intron 35.0%
GAAAGCCAAAATAGGCTTAT+TGG + chr7_2:83316793-83316812 None:intergenic 35.0%
CATTGTCAACATCTTTCACA+TGG - chr7_2:83316905-83316924 Msa1083090:intron 35.0%
AATTGACAAAAACAGTGCTC+AGG + chr7_2:83316954-83316973 None:intergenic 35.0%
AGGATTACTCCTAGTAAACA+AGG - chr7_2:83316994-83317013 Msa1083090:intron 35.0%
TTACTCCTAGTAAACAAGGT+TGG - chr7_2:83316998-83317017 Msa1083090:intron 35.0%
! TGTAACCAACCTTGTTTACT+AGG + chr7_2:83317006-83317025 None:intergenic 35.0%
! AGTAAACAAGGTTGGTTACA+TGG - chr7_2:83317006-83317025 Msa1083090:intron 35.0%
! GTAAACAAGGTTGGTTACAT+GGG - chr7_2:83317007-83317026 Msa1083090:intron 35.0%
AGATTTGTACTTATAGCGTG+AGG + chr7_2:83317121-83317140 None:intergenic 35.0%
! AATCTACTGGGCTTGAATTT+TGG + chr7_2:83317149-83317168 None:intergenic 35.0%
GCAAACTCTTCAAATCTACT+GGG + chr7_2:83317161-83317180 None:intergenic 35.0%
TGCAAACTCTTCAAATCTAC+TGG + chr7_2:83317162-83317181 None:intergenic 35.0%
GAAATGCCTCTCAAAATGAT+TGG - chr7_2:83317183-83317202 Msa1083090:intron 35.0%
TTGGTGGGACAAAACAAAAT+TGG - chr7_2:83317202-83317221 Msa1083090:intron 35.0%
TGGTGGGACAAAACAAAATT+GGG - chr7_2:83317203-83317222 Msa1083090:intron 35.0%
!! ATTGAAGATTTTGGAAGCAC+AGG - chr7_2:83317256-83317275 Msa1083090:intron 35.0%
!! TTGAAGATTTTGGAAGCACA+GGG - chr7_2:83317257-83317276 Msa1083090:intron 35.0%
CACGTTCAAAAGAGATTAGA+AGG - chr7_2:83317758-83317777 Msa1083090:intron 35.0%
AAGTATTATTCCAAGGTGGT+AGG + chr7_2:83317784-83317803 None:intergenic 35.0%
AGAGAATCTCAATACCATGA+TGG - chr7_2:83317889-83317908 Msa1083090:intron 35.0%
! AGGTACATGTTTTACAGCCT+TGG - chr7_2:83312738-83312757 Msa1083090:three_prime_UTR 40.0%
! TACATGTTTTACAGCCTTGG+AGG - chr7_2:83312741-83312760 Msa1083090:three_prime_UTR 40.0%
ATGTGGTACCTTCATACTCA+TGG - chr7_2:83312802-83312821 Msa1083090:three_prime_UTR 40.0%
ATACATACATCACCATCACG+TGG + chr7_2:83313356-83313375 None:intergenic 40.0%
ATGCTACGTATCATCAAGCA+AGG - chr7_2:83313456-83313475 Msa1083090:CDS 40.0%
TACCTTCACTGAAAGCTTCA+TGG - chr7_2:83313534-83313553 Msa1083090:CDS 40.0%
AACCATGAAGCTTTCAGTGA+AGG + chr7_2:83313539-83313558 None:intergenic 40.0%
TGATACTAATCCTGCTGCAA+TGG - chr7_2:83313568-83313587 Msa1083090:CDS 40.0%
! AAGTGGGGTACCTATATGTT+TGG - chr7_2:83313633-83313652 Msa1083090:CDS 40.0%
AACTCAAGCTTCTCACTGAA+TGG - chr7_2:83314037-83314056 Msa1083090:CDS 40.0%
GAATGGAAGAGAAAGAAAGG+TGG - chr7_2:83314054-83314073 Msa1083090:CDS 40.0%
! AGAGAAAGAAAGGTGGATTC+AGG - chr7_2:83314061-83314080 Msa1083090:CDS 40.0%
! GAGAAAGAAAGGTGGATTCA+GGG - chr7_2:83314062-83314081 Msa1083090:CDS 40.0%
TGATGTAGTGTTGTCAGCAT+TGG - chr7_2:83314187-83314206 Msa1083090:CDS 40.0%
! GTTGTCAGCATTGGACAATA+TGG - chr7_2:83314196-83314215 Msa1083090:CDS 40.0%
TATGGGATTTGTGGCAAACA+TGG - chr7_2:83314214-83314233 Msa1083090:CDS 40.0%
ACTTTCTTGCTTTCCCTTGT+TGG - chr7_2:83314320-83314339 Msa1083090:intron 40.0%
!! TTCACCACTTGCTTGCTTTT+TGG - chr7_2:83314374-83314393 Msa1083090:intron 40.0%
AGATCCAAAAAGCAAGCAAG+TGG + chr7_2:83314381-83314400 None:intergenic 40.0%
CTGTCAACATGATTAGTGTC+CGG + chr7_2:83314444-83314463 None:intergenic 40.0%
! ACACATTCGATCAGAAGTGT+CGG - chr7_2:83314469-83314488 Msa1083090:intron 40.0%
! ACATTTGTAGGCTTTGGCAT+TGG - chr7_2:83314541-83314560 Msa1083090:intron 40.0%
CTTGATTTCCCACATGCATT+TGG + chr7_2:83314599-83314618 None:intergenic 40.0%
! GGGAAATCAAGTTGTGTGAA+AGG - chr7_2:83314608-83314627 Msa1083090:intron 40.0%
AGTTGTGTGAAAGGTGGAAT+AGG - chr7_2:83314617-83314636 Msa1083090:intron 40.0%
ATCACTGACATTGTTGGCAT+TGG - chr7_2:83314655-83314674 Msa1083090:intron 40.0%
TCACTGACATTGTTGGCATT+GGG - chr7_2:83314656-83314675 Msa1083090:intron 40.0%
! ACATTGTTGGCATTGGGAAT+AGG - chr7_2:83314662-83314681 Msa1083090:intron 40.0%
AGAGGATCTATGACTGCATT+TGG - chr7_2:83314692-83314711 Msa1083090:intron 40.0%
TCAACACTTGGAGCAATTAC+AGG - chr7_2:83314791-83314810 Msa1083090:intron 40.0%
!! AGGTGTTACTGGTGTTGTTT+GGG - chr7_2:83314811-83314830 Msa1083090:intron 40.0%
TACACAAAGAGCTTGGCATT+GGG - chr7_2:83314838-83314857 Msa1083090:intron 40.0%
ACCTGAGCAATTCTGATTGT+GGG + chr7_2:83314956-83314975 None:intergenic 40.0%
ATGCTTAACCAATGCCGTTA+GGG - chr7_2:83315298-83315317 Msa1083090:intron 40.0%
TATAGTTCTTCGTGTGACTC+TGG + chr7_2:83315583-83315602 None:intergenic 40.0%
AAGTGACAAAGATGGAACAG+TGG - chr7_2:83315609-83315628 Msa1083090:intron 40.0%
!! GACGGAGGTAGTATTAGTTT+TGG + chr7_2:83315733-83315752 None:intergenic 40.0%
TGTCAATTAAATTGGGACGG+AGG + chr7_2:83315748-83315767 None:intergenic 40.0%
ATGACAGGAATTGAAGATGC+TGG + chr7_2:83316568-83316587 None:intergenic 40.0%
AGGAATCACACAACTCCAAA+GGG - chr7_2:83316672-83316691 Msa1083090:intron 40.0%
GTTATATCAATGACAGTGGC+TGG - chr7_2:83316718-83316737 Msa1083090:intron 40.0%
TGCTGATATGTTCACACTTG+TGG - chr7_2:83316837-83316856 Msa1083090:intron 40.0%
GCTGATATGTTCACACTTGT+GGG - chr7_2:83316838-83316857 Msa1083090:intron 40.0%
TAGCTAGGAACCAATAGAAC+AGG + chr7_2:83317059-83317078 None:intergenic 40.0%
ATGCCTCTCAAAATGATTGG+TGG - chr7_2:83317186-83317205 Msa1083090:intron 40.0%
TGCCTCTCAAAATGATTGGT+GGG - chr7_2:83317187-83317206 Msa1083090:intron 40.0%
GGGACAAAACAAAATTGGGA+AGG - chr7_2:83317207-83317226 Msa1083090:intron 40.0%
CAAAATTGGGAAGGTAGCAT+TGG - chr7_2:83317216-83317235 Msa1083090:intron 40.0%
ACAAGAATGGAATGGATCAG+TGG - chr7_2:83317285-83317304 Msa1083090:intron 40.0%
! GAATGGATCAGTGGATGTTT+TGG - chr7_2:83317294-83317313 Msa1083090:intron 40.0%
AGTACATAGTAGCAATCTCG+TGG + chr7_2:83317343-83317362 None:intergenic 40.0%
!! TGATTTGCTATTGTTGGCTC+TGG - chr7_2:83317417-83317436 Msa1083090:intron 40.0%
GAGATTCTCTTAAACTACCG+TGG + chr7_2:83317879-83317898 None:intergenic 40.0%
! TCTCAATACCATGATGGTGT+TGG - chr7_2:83317895-83317914 Msa1083090:intron 40.0%
! CTCAATACCATGATGGTGTT+GGG - chr7_2:83317896-83317915 Msa1083090:intron 40.0%
! TCAATACCATGATGGTGTTG+GGG - chr7_2:83317897-83317916 Msa1083090:intron 40.0%
! TGTTTTACAGCCTTGGAGGA+TGG - chr7_2:83312745-83312764 Msa1083090:three_prime_UTR 45.0%
! ATGGGTCAGTTATTCTGGGA+CGG - chr7_2:83313265-83313284 Msa1083090:three_prime_UTR 45.0%
ATCCTGCTGCAATGGAATGA+TGG - chr7_2:83313576-83313595 Msa1083090:CDS 45.0%
ATCCATCATTCCATTGCAGC+AGG + chr7_2:83313581-83313600 None:intergenic 45.0%
GTGTGATAAGTAGCATGGAG+AGG - chr7_2:83313795-83313814 Msa1083090:CDS 45.0%
GGACAAGTAGTGAACCATAG+AGG - chr7_2:83313816-83313835 Msa1083090:CDS 45.0%
!! GTGAGAGTATTGGCAGAACT+TGG + chr7_2:83314284-83314303 None:intergenic 45.0%
TTCTTGCTTTCCCTTGTTGG+TGG - chr7_2:83314323-83314342 Msa1083090:intron 45.0%
!! GATCAGAAGTGTCGGTGTTA+TGG - chr7_2:83314477-83314496 Msa1083090:intron 45.0%
! TTGTTGGCATTGGGAATAGG+AGG - chr7_2:83314665-83314684 Msa1083090:intron 45.0%
! TGTTGGCATTGGGAATAGGA+GGG - chr7_2:83314666-83314685 Msa1083090:intron 45.0%
! GCAAGTGCTTTTGCCTCATT+TGG + chr7_2:83314743-83314762 None:intergenic 45.0%
! GGAGCAATTACAGGTGTTAC+TGG - chr7_2:83314800-83314819 Msa1083090:intron 45.0%
!! CAGGTGTTACTGGTGTTGTT+TGG - chr7_2:83314810-83314829 Msa1083090:intron 45.0%
! GGGTTAGTACACAAAGAGCT+TGG - chr7_2:83314831-83314850 Msa1083090:intron 45.0%
GTACACAAAGAGCTTGGCAT+TGG - chr7_2:83314837-83314856 Msa1083090:intron 45.0%
ACACAAAGAGCTTGGCATTG+GGG - chr7_2:83314839-83314858 Msa1083090:intron 45.0%
CCTGAGCAATTCTGATTGTG+GGG + chr7_2:83314955-83314974 None:intergenic 45.0%
GACCTGAGCAATTCTGATTG+TGG + chr7_2:83314957-83314976 None:intergenic 45.0%
ATCCTTAACCATTGCCCTCA+GGG + chr7_2:83315184-83315203 None:intergenic 45.0%
AATCCTTAACCATTGCCCTC+AGG + chr7_2:83315185-83315204 None:intergenic 45.0%
GATGCTTAACCAATGCCGTT+AGG - chr7_2:83315297-83315316 Msa1083090:intron 45.0%
TGTGCACACTTTCCATGGTT+GGG + chr7_2:83316395-83316414 None:intergenic 45.0%
AAAATCACCAACCACCCTTC+AGG - chr7_2:83316652-83316671 Msa1083090:intron 45.0%
GGAGTTGTGTGATTCCTGAA+GGG + chr7_2:83316669-83316688 None:intergenic 45.0%
TGGAGTTGTGTGATTCCTGA+AGG + chr7_2:83316670-83316689 None:intergenic 45.0%
CAGGAATCACACAACTCCAA+AGG - chr7_2:83316671-83316690 Msa1083090:intron 45.0%
ATCACACAACTCCAAAGGGT+AGG - chr7_2:83316676-83316695 Msa1083090:intron 45.0%
CTAATCCAACACCTACCCTT+TGG + chr7_2:83316690-83316709 None:intergenic 45.0%
TATAGCGTGAGGCCCAATAA+AGG + chr7_2:83317110-83317129 None:intergenic 45.0%
! GTCCCACCAATCATTTTGAG+AGG + chr7_2:83317192-83317211 None:intergenic 45.0%
! AATTGGGAAGGTAGCATTGG+CGG - chr7_2:83317219-83317238 Msa1083090:intron 45.0%
!! AAGATTTTGGAAGCACAGGG+TGG - chr7_2:83317260-83317279 Msa1083090:intron 45.0%
!! TATTTAATATTATATTGTAT+TGG - chr7_2:83313177-83313196 Msa1083090:three_prime_UTR 5.0%
!! ATTTAATATTATATTGTATT+GGG - chr7_2:83313178-83313197 Msa1083090:three_prime_UTR 5.0%
!! AAAAATAAAAATTGTATTAT+TGG + chr7_2:83313709-83313728 None:intergenic 5.0%
! AGCTGACTTTCCATCCTCCA+AGG + chr7_2:83312758-83312777 None:intergenic 50.0%
!! GTCAGTTATTCTGGGACGGT+GGG - chr7_2:83313269-83313288 Msa1083090:three_prime_UTR 50.0%
GGAGATGAAGCCACCAACAA+GGG + chr7_2:83314336-83314355 None:intergenic 50.0%
! GTTGGCATTGGGAATAGGAG+GGG - chr7_2:83314667-83314686 Msa1083090:intron 50.0%
TTGGGAATAGGAGGGGTAAG+AGG - chr7_2:83314674-83314693 Msa1083090:intron 50.0%
! GGCTTTGTCACACTTGCTCT+TGG - chr7_2:83314893-83314912 Msa1083090:intron 50.0%
CCCCACAATCAGAATTGCTC+AGG - chr7_2:83314952-83314971 Msa1083090:intron 50.0%
AATGCTAGCCAGTGCCCTAA+CGG + chr7_2:83315315-83315334 None:intergenic 50.0%
ACTCTGGCAGTGACAGCTTT+CGG + chr7_2:83315567-83315586 None:intergenic 50.0%
GTGCACACTTTCCATGGTTG+GGG + chr7_2:83316394-83316413 None:intergenic 50.0%
CTGTGCACACTTTCCATGGT+TGG + chr7_2:83316396-83316415 None:intergenic 50.0%
GTCACTGTGCACACTTTCCA+TGG + chr7_2:83316400-83316419 None:intergenic 50.0%
TGTGATTCCTGAAGGGTGGT+TGG + chr7_2:83316662-83316681 None:intergenic 50.0%
GTTGTGTGATTCCTGAAGGG+TGG + chr7_2:83316666-83316685 None:intergenic 50.0%
CAACTCCAAAGGGTAGGTGT+TGG - chr7_2:83316682-83316701 Msa1083090:intron 50.0%
GTTCACACTTGTGGGACTCT+TGG - chr7_2:83316846-83316865 Msa1083090:intron 50.0%
GGGTGGAGACAAGAATGGAA+TGG - chr7_2:83317277-83317296 Msa1083090:intron 50.0%
GATTAGAAGGCCTACCACCT+TGG - chr7_2:83317771-83317790 Msa1083090:intron 50.0%
!! GGTCAGTTATTCTGGGACGG+TGG - chr7_2:83313268-83313287 Msa1083090:three_prime_UTR 55.0%
CGGAGATGAAGCCACCAACA+AGG + chr7_2:83314337-83314356 None:intergenic 55.0%
CTGATTGTGGGGCTATCTGC+TGG + chr7_2:83314944-83314963 None:intergenic 55.0%
TCTTGCTAACCAGTGCCCTG+AGG - chr7_2:83315166-83315185 Msa1083090:intron 55.0%
CTTGCTAACCAGTGCCCTGA+GGG - chr7_2:83315167-83315186 Msa1083090:intron 55.0%
TGCCCTGAGGGCAATGGTTA+AGG - chr7_2:83315179-83315198 Msa1083090:intron 55.0%
AACCAATGCCGTTAGGGCAC+TGG - chr7_2:83315304-83315323 Msa1083090:intron 55.0%
GCACAGGGTGGAGACAAGAA+TGG - chr7_2:83317272-83317291 Msa1083090:intron 55.0%
AACCAGTGCCCTGAGGGCAA+TGG - chr7_2:83315173-83315192 Msa1083090:intron 60.0%
AACCATTGCCCTCAGGGCAC+TGG + chr7_2:83315178-83315197 None:intergenic 60.0%
AGCCAGTGCCCTAACGGCAT+TGG + chr7_2:83315309-83315328 None:intergenic 60.0%
!! TGGGAAGGTAGCATTGGCGG+TGG - chr7_2:83317222-83317241 Msa1083090:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 83312696 83317924 83312696 ID=Msa1083090;Name=Msa1083090
chr7_2 mRNA 83312696 83317924 83312696 ID=Msa1083090-mRNA-1;Parent=Msa1083090;Name=Msa1083090-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.42|0.37|0.75|0.57|0.5|8|664|539
chr7_2 exon 83312696 83314272 83312696 ID=Msa1083090-mRNA-1:exon:21843;Parent=Msa1083090-mRNA-1
chr7_2 exon 83314961 83315079 83314961 ID=Msa1083090-mRNA-1:exon:21842;Parent=Msa1083090-mRNA-1
chr7_2 exon 83315647 83315807 83315647 ID=Msa1083090-mRNA-1:exon:21841;Parent=Msa1083090-mRNA-1
chr7_2 exon 83315856 83316035 83315856 ID=Msa1083090-mRNA-1:exon:21840;Parent=Msa1083090-mRNA-1
chr7_2 exon 83316279 83316425 83316279 ID=Msa1083090-mRNA-1:exon:21839;Parent=Msa1083090-mRNA-1
chr7_2 exon 83316518 83316605 83316518 ID=Msa1083090-mRNA-1:exon:21838;Parent=Msa1083090-mRNA-1
chr7_2 exon 83317224 83317231 83317224 ID=Msa1083090-mRNA-1:exon:21837;Parent=Msa1083090-mRNA-1
chr7_2 exon 83317921 83317924 83317921 ID=Msa1083090-mRNA-1:exon:21836;Parent=Msa1083090-mRNA-1
chr7_2 CDS 83317921 83317924 83317921 ID=Msa1083090-mRNA-1:cds;Parent=Msa1083090-mRNA-1
chr7_2 CDS 83317224 83317231 83317224 ID=Msa1083090-mRNA-1:cds;Parent=Msa1083090-mRNA-1
chr7_2 CDS 83316518 83316605 83316518 ID=Msa1083090-mRNA-1:cds;Parent=Msa1083090-mRNA-1
chr7_2 CDS 83316279 83316425 83316279 ID=Msa1083090-mRNA-1:cds;Parent=Msa1083090-mRNA-1
chr7_2 CDS 83315856 83316035 83315856 ID=Msa1083090-mRNA-1:cds;Parent=Msa1083090-mRNA-1
chr7_2 CDS 83315647 83315807 83315647 ID=Msa1083090-mRNA-1:cds;Parent=Msa1083090-mRNA-1
chr7_2 CDS 83314961 83315079 83314961 ID=Msa1083090-mRNA-1:cds;Parent=Msa1083090-mRNA-1
chr7_2 CDS 83313360 83314272 83313360 ID=Msa1083090-mRNA-1:cds;Parent=Msa1083090-mRNA-1
chr7_2 three_prime_UTR 83312696 83313359 83312696 ID=Msa1083090-mRNA-1:three_prime_utr;Parent=Msa1083090-mRNA-1
Gene Sequence

>Msa1083090

ATGGCTTTTAAAGCAGATCAAGAGGAAACTGAAGAACTCAAGCTTCTCACTGAATGGAAGAGAAAGAAAGGTGGATTCAGGGCTTCTATGTTTATTTTTGTGTTGTCAGCATTGGACAATATGGGATTTGTGGCAAACATGGTTAGCTTAGTTTTATATTTTTATGGAGTGATGCACTTTGATCTACCAAGTTCTGCCAATACTCTCACAAACTTCATGGGATCAACTTTCTTGCTTTCCCTTGTTGATCATTTACATCCAAATGCATGTGGGAAATCAAGTTGTGTGAAAGGTGGAATAGGATTCATGTTTTACACATCACTGACATTGTTGGCATTGGGAATAGGAGGGGTAAGAGGATCTATGACTGCATTTGGTGCTGACCAATTTGAAGAAAAGGATCCAAATGAGGCAAAAGCACTTGCAAGTGTTACTGGTGTTGTTTGGGTTAGTACACAAAGAGCTTGGCATTGGGGATTTTTCATAATAACTATAGCTTCTTCTATTGGCTTTGTCACACTTGCTCTTGGTAAGCCTTTCTATAGAATCAAAACTCCAGCAGATAGCCCCACAATCAGAATTGCTCAGGTTATTGTTGTGGCATTTAAAAACCGAAAGCTGTCACTGCCAGAGTCACACGAAGAACTATATGAAATAAGTGACAAAGATGGAACAGTGGAGAAAATTGTTCACACAAAACAAATGAGGTTTCTAGATAAAGCAGCAATTCCCCAAGAATACATAATAAAACCCCAACCATGGAAAGTGTGCACAGTGACACAAGTTGAAGAAGTGAAAATCCTAACAAGAATGTTACCAATAGTAGCTAGCACAATCATAATGAACACTTGTTTAGCACAGCTTCAAACATTCTCAGTACAACAAGGGAATGTAATGAACCTTAAACTTGGTTCATTTACTGTTCCAGCATCTTCAATTCCTGTCATCCCTCTTATTTTCATAAGCATTTTGGTTCCAATTTATGAACTTTTCTTTGTTCCATTTGCAAGAAAAATCACCAACCACCCTTCAGGAATCACACAACTCCAAAGGGTAGGTGTTGGATTAGTACTATCAGTTATATCAATGACAGTGGCTGGGATAGTAGAAGTCAAAAGAAGGGACCAAAGTAGAAAAGACCCATCTAACCCAATAAGCCTATTTTGGCTTTCATTCCAATATGGCATTTTTGGTATTGCTGATATGTTCACACTTGTGGGACTCTTGGAATTTTTTTATAGGGAATCACCTTCAAGTATGAAATCATTGTCAACATCTTTCACATGGTTATCAATGTCTATTGGTTACTTCCTGAGCACTGTTTTTGTCAATTTGATTAATGTTGTTACCAAAAGGATTACTCCTAGTAAACAAGGTTGGTTACATGGGTTTGATTTGAATCAAAGTAATTTGAACCTGTTCTATTGGTTCCTAGCTATACTTAGTTGTCTTAATTTTTTCAACTACCTTTATTGGGCCTCACGCTATAAGTACAAATCTGAAGACCAAAATTCAAGCCCAGTAGATTTGAAGAGTTTGCATGAAATGCCTCTCAAAATGATTGGTGGGACAAAACAAAATTGGGAAGGTAGCATTGGCGGTGGACACACACAAGATTGA
Protein sequence

>Msa1083090

MAFKADQEETEELKLLTEWKRKKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDLPSSANTLTNFMGSTFLLSLVDHLHPNACGKSSCVKGGIGFMFYTSLTLLALGIGGVRGSMTAFGADQFEEKDPNEAKALASVTGVVWVSTQRAWHWGFFIITIASSIGFVTLALGKPFYRIKTPADSPTIRIAQVIVVAFKNRKLSLPESHEELYEISDKDGTVEKIVHTKQMRFLDKAAIPQEYIIKPQPWKVCTVTQVEEVKILTRMLPIVASTIIMNTCLAQLQTFSVQQGNVMNLKLGSFTVPASSIPVIPLIFISILVPIYELFFVPFARKITNHPSGITQLQRVGVGLVLSVISMTVAGIVEVKRRDQSRKDPSNPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPSSMKSLSTSFTWLSMSIGYFLSTVFVNLINVVTKRITPSKQGWLHGFDLNQSNLNLFYWFLAILSCLNFFNYLYWASRYKYKSEDQNSSPVDLKSLHEMPLKMIGGTKQNWEGSIGGGHTQD*