AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1351760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1351760 MtrunA17_Chr7g0271221 92.833 586 9 2 1 554 1 585 0.0 1098
Msa1351760 MtrunA17_Chr1g0193391 77.951 576 89 4 1 543 1 571 0.0 907
Msa1351760 MtrunA17_Chr4g0069581 55.849 530 197 5 35 529 4 531 0.0 534
Msa1351760 MtrunA17_Chr3g0133341 46.975 562 236 11 17 526 14 565 4.63e-166 483
Msa1351760 MtrunA17_Chr2g0284701 41.864 590 271 12 3 522 8 595 9.90e-146 432
Msa1351760 MtrunA17_Chr8g0379971 41.098 601 273 12 5 525 2 601 3.68e-135 405
Msa1351760 MtrunA17_Chr5g0415961 38.339 566 275 12 15 515 16 572 2.81e-129 389
Msa1351760 MtrunA17_Chr8g0362711 39.427 558 269 11 17 515 24 571 5.40e-129 389
Msa1351760 MtrunA17_Chr8g0379991 41.913 575 246 11 38 525 1 574 4.96e-127 384
Msa1351760 MtrunA17_Chr2g0276751 38.806 536 279 10 18 515 39 563 2.09e-122 372
Msa1351760 MtrunA17_Chr3g0142101 37.018 570 299 12 4 520 12 574 1.26e-112 347
Msa1351760 MtrunA17_Chr4g0005901 35.662 544 301 10 17 515 32 571 4.72e-109 337
Msa1351760 MtrunA17_Chr3g0142091 36.563 547 299 8 17 520 26 567 1.29e-106 331
Msa1351760 MtrunA17_Chr7g0241741 34.426 549 313 7 17 521 22 567 5.86e-105 327
Msa1351760 MtrunA17_Chr7g0214731 34.720 553 306 9 19 517 63 614 2.04e-104 327
Msa1351760 MtrunA17_Chr8g0375311 33.150 546 315 8 17 515 40 582 1.53e-102 321
Msa1351760 MtrunA17_Chr3g0104011 33.698 549 307 10 17 515 22 563 1.50e-101 318
Msa1351760 MtrunA17_Chr7g0240381 35.009 537 298 9 21 516 33 559 1.84e-101 318
Msa1351760 MtrunA17_Chr8g0375291 34.078 537 304 7 17 506 40 573 3.62e-100 315
Msa1351760 MtrunA17_Chr5g0422881 36.042 566 295 13 17 520 20 580 1.71e-99 313
Msa1351760 MtrunA17_Chr3g0112671 34.128 545 316 9 17 525 33 570 3.29e-98 309
Msa1351760 MtrunA17_Chr5g0399071 34.806 566 312 10 17 530 25 585 6.43e-98 309
Msa1351760 MtrunA17_Chr7g0261811 34.555 573 318 12 4 527 14 578 8.40e-98 309
Msa1351760 MtrunA17_Chr8g0375361 33.333 546 314 7 17 515 39 581 2.49e-97 307
Msa1351760 MtrunA17_Chr5g0399061 35.921 554 296 15 17 517 27 574 4.72e-97 306
Msa1351760 MtrunA17_Chr4g0008651 34.312 545 313 9 17 520 34 574 1.92e-96 305
Msa1351760 MtrunA17_Chr7g0261881 32.810 573 328 11 4 527 14 578 4.14e-96 304
Msa1351760 MtrunA17_Chr8g0375321 32.907 547 317 8 17 516 37 580 3.43e-92 294
Msa1351760 MtrunA17_Chr3g0114501 34.375 544 308 10 19 517 24 563 1.08e-91 293
Msa1351760 MtrunA17_Chr7g0261791 32.236 577 330 10 4 528 16 583 2.97e-91 292
Msa1351760 MtrunA17_Chr8g0375351 32.353 544 318 7 17 513 40 580 4.31e-91 291
Msa1351760 MtrunA17_Chr8g0375341 32.051 546 321 7 17 515 40 582 6.31e-91 290
Msa1351760 MtrunA17_Chr7g0261771 31.771 576 332 11 4 527 18 584 1.29e-90 290
Msa1351760 MtrunA17_Chr5g0439381 34.054 555 304 11 17 525 28 566 3.14e-90 289
Msa1351760 MtrunA17_Chr4g0056431 35.626 567 305 13 17 528 25 586 4.95e-90 288
Msa1351760 MtrunA17_Chr8g0375331 32.630 521 301 8 17 490 24 541 8.44e-90 287
Msa1351760 MtrunA17_Chr7g0261661 36.175 481 277 11 82 545 23 490 1.98e-89 284
Msa1351760 MtrunA17_Chr1g0166791 30.836 574 347 7 4 531 11 580 3.97e-88 283
Msa1351760 MtrunA17_Chr4g0063591 34.679 545 303 9 17 515 22 559 1.97e-87 281
Msa1351760 MtrunA17_Chr7g0255621 31.957 557 318 12 17 519 20 569 2.22e-87 282
Msa1351760 MtrunA17_Chr1g0187241 30.729 576 345 9 4 531 13 582 3.29e-87 281
Msa1351760 MtrunA17_Chr1g0213711 30.473 571 347 11 1 525 1 567 6.46e-87 280
Msa1351760 MtrunA17_Chr7g0255611 30.957 575 328 14 17 529 29 596 5.81e-86 278
Msa1351760 MtrunA17_Chr7g0255601 32.337 569 322 12 1 515 13 572 2.75e-85 276
Msa1351760 MtrunA17_Chr3g0112611 32.117 548 325 9 21 525 36 579 2.92e-85 276
Msa1351760 MtrunA17_Chr4g0060071 48.571 280 129 5 248 520 32 303 3.75e-85 266
Msa1351760 MtrunA17_Chr1g0166711 32.174 575 337 10 4 531 12 580 1.17e-81 266
Msa1351760 MtrunA17_Chr5g0400371 30.390 589 340 13 4 527 91 674 1.97e-81 268
Msa1351760 MtrunA17_Chr3g0082631 36.591 440 250 8 103 519 30 463 4.64e-81 261
Msa1351760 MtrunA17_Chr7g0261851 31.588 573 332 11 4 525 15 578 7.57e-81 265
Msa1351760 MtrunA17_Chr5g0415791 32.112 573 316 14 17 527 29 590 1.31e-80 264
Msa1351760 MtrunA17_Chr1g0166771 32.480 508 298 7 31 498 5 507 4.90e-80 261
Msa1351760 MtrunA17_Chr4g0054891 30.241 582 338 13 4 522 89 665 6.89e-80 264
Msa1351760 MtrunA17_Chr7g0214461 30.571 543 321 12 18 513 79 612 2.56e-79 261
Msa1351760 MtrunA17_Chr1g0166731 34.820 471 285 9 66 521 4 467 1.33e-78 255
Msa1351760 MtrunA17_Chr1g0166741 30.287 558 344 7 4 521 14 566 1.79e-78 258
Msa1351760 MtrunA17_Chr7g0234381 36.404 445 254 7 70 512 1 418 1.01e-77 251
Msa1351760 MtrunA17_Chr4g0059971 31.338 568 332 11 3 515 20 584 1.58e-77 256
Msa1351760 MtrunA17_Chr8g0362801 34.105 475 287 10 75 527 3 473 2.25e-77 252
Msa1351760 MtrunA17_Chr7g0217461 30.909 550 325 9 17 514 24 570 2.45e-77 255
Msa1351760 MtrunA17_Chr8g0353031 31.429 560 341 12 1 521 1 556 3.51e-77 254
Msa1351760 MtrunA17_Chr7g0218851 28.265 559 351 11 18 531 47 600 1.54e-76 253
Msa1351760 MtrunA17_Chr4g0014791 35.172 435 259 8 93 517 130 551 2.74e-76 251
Msa1351760 MtrunA17_Chr7g0234181 35.616 438 257 7 75 512 1 413 7.49e-76 246
Msa1351760 MtrunA17_Chr4g0014861 34.742 426 256 9 103 517 16 430 9.95e-76 246
Msa1351760 MtrunA17_Chr4g0014841 30.499 541 318 12 17 517 29 551 6.52e-75 248
Msa1351760 MtrunA17_Chr4g0011471 31.193 545 308 11 26 513 23 557 6.84e-75 248
Msa1351760 MtrunA17_Chr4g0014801 35.514 428 249 10 103 517 140 553 4.15e-74 246
Msa1351760 MtrunA17_Chr4g0059991 28.833 600 355 14 2 539 11 600 5.25e-74 246
Msa1351760 MtrunA17_Chr4g0059981 33.608 485 293 11 65 525 112 591 6.85e-74 246
Msa1351760 MtrunA17_Chr7g0234151 34.735 452 252 10 70 512 1 418 3.07e-73 239
Msa1351760 MtrunA17_Chr4g0014781 34.545 440 257 11 93 517 130 553 8.58e-73 242
Msa1351760 MtrunA17_Chr3g0077151 30.957 533 317 10 17 515 28 543 6.05e-72 239
Msa1351760 MtrunA17_Chr4g0014871 33.176 425 264 8 103 517 141 555 3.06e-70 235
Msa1351760 MtrunA17_Chr8g0390331 29.828 580 341 15 1 528 5 570 9.74e-70 234
Msa1351760 MtrunA17_Chr7g0235521 29.607 483 309 11 76 532 4 481 3.03e-66 223
Msa1351760 MtrunA17_Chr7g0240181 29.814 483 308 11 76 532 4 481 3.70e-66 223
Msa1351760 MtrunA17_Chr7g0240211 29.814 483 308 11 76 532 4 481 7.23e-66 222
Msa1351760 MtrunA17_Chr7g0240271 28.154 547 339 12 17 512 24 567 9.34e-66 224
Msa1351760 MtrunA17_Chr4g0060001 33.187 455 281 11 76 512 120 569 1.45e-65 224
Msa1351760 MtrunA17_Chr8g0362781 27.448 572 356 10 1 516 14 582 2.10e-65 223
Msa1351760 MtrunA17_Chr7g0240131 29.400 483 310 11 76 532 4 481 7.99e-65 219
Msa1351760 MtrunA17_Chr4g0011041 28.233 549 337 11 17 513 36 579 1.29e-63 218
Msa1351760 MtrunA17_Chr3g0142121 42.705 281 153 5 253 531 11 285 4.46e-63 208
Msa1351760 MtrunA17_Chr2g0331481 30.335 567 323 17 3 509 11 565 2.31e-62 216
Msa1351760 MtrunA17_Chr3g0112631 40.141 284 156 5 252 525 3 282 1.69e-61 204
Msa1351760 MtrunA17_Chr2g0331471 30.373 563 320 17 7 509 78 628 1.78e-61 215
Msa1351760 MtrunA17_Chr4g0003761 28.947 570 340 20 18 534 31 588 2.46e-61 213
Msa1351760 MtrunA17_Chr2g0331511 28.521 568 334 15 17 522 21 578 4.37e-60 210
Msa1351760 MtrunA17_Chr1g0147631 28.993 576 335 17 19 533 27 589 5.23e-60 209
Msa1351760 MtrunA17_Chr7g0240281 29.872 549 323 11 17 509 24 566 1.01e-59 208
Msa1351760 MtrunA17_Chr5g0415841 30.603 464 294 9 75 516 3 460 4.57e-59 203
Msa1351760 MtrunA17_Chr7g0240151 28.364 483 297 12 76 532 4 463 1.58e-58 202
Msa1351760 MtrunA17_Chr1g0177591 27.768 551 353 11 4 518 29 570 1.72e-58 204
Msa1351760 MtrunA17_Chr1g0177611 31.059 425 275 9 103 518 26 441 4.51e-58 200
Msa1351760 MtrunA17_Chr1g0177631 32.235 425 270 9 103 518 26 441 1.00e-57 199
Msa1351760 MtrunA17_Chr1g0157611 26.970 571 356 16 7 525 6 567 1.43e-57 202
Msa1351760 MtrunA17_Chr7g0261751 28.692 474 251 7 4 396 18 485 7.52e-57 199
Msa1351760 MtrunA17_Chr1g0157601 27.629 561 345 14 4 512 2 553 4.05e-55 195
Msa1351760 MtrunA17_Chr2g0331521 26.829 574 353 18 17 531 22 587 3.31e-54 193
Msa1351760 MtrunA17_Chr1g0157621 29.954 434 276 13 105 520 102 525 3.06e-53 190
Msa1351760 MtrunA17_Chr2g0331461 28.889 585 339 19 3 522 11 583 2.59e-52 189
Msa1351760 MtrunA17_Chr2g0326211 28.222 450 289 10 83 516 117 548 2.62e-52 187
Msa1351760 MtrunA17_Chr2g0325961 28.603 451 287 10 83 516 117 549 5.61e-50 181
Msa1351760 MtrunA17_Chr2g0325951 27.719 469 306 11 63 516 98 548 1.18e-49 179
Msa1351760 MtrunA17_Chr6g0451841 29.953 424 271 8 114 520 127 541 1.25e-48 177
Msa1351760 MtrunA17_Chr7g0261731 29.446 343 192 5 4 302 18 354 7.65e-42 154
Msa1351760 MtrunA17_Chr3g0142111 31.148 305 160 7 4 259 23 326 3.14e-38 143
Msa1351760 MtrunA17_Chr7g0261721 36.199 221 129 4 322 533 5 222 1.63e-36 135
Msa1351760 MtrunA17_Chr1g0147591 32.338 201 124 4 104 295 3 200 2.45e-28 112
Msa1351760 MtrunA17_Chr7g0261831 38.158 152 86 3 210 356 1 149 1.32e-25 104
Msa1351760 MtrunA17_Chr3g0112651 34.211 152 99 1 103 253 52 203 1.59e-25 104
Msa1351760 MtrunA17_Chr4g0060061 38.136 118 73 0 96 213 11 128 1.02e-21 91.3
Msa1351760 MtrunA17_Chr2g0326221 30.222 225 130 7 292 515 25 223 2.86e-19 87.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1351760 AT1G69850.1 37.268 593 292 10 1 521 1 585 8.78e-133 399
Msa1351760 AT1G59740.1 40.675 563 289 9 4 524 26 585 3.13e-130 393
Msa1351760 AT1G27040.1 38.757 547 279 10 17 516 25 562 9.40e-128 385
Msa1351760 AT1G27040.2 38.757 547 279 10 17 516 21 558 1.13e-127 385
Msa1351760 AT1G27040.3 39.319 529 265 10 35 516 11 530 8.85e-125 377
Msa1351760 AT1G33440.1 39.700 534 278 7 19 512 38 567 2.32e-120 368
Msa1351760 AT5G62730.1 36.442 579 283 12 5 518 30 588 9.18e-117 358
Msa1351760 AT5G62730.2 37.477 547 269 11 25 518 3 529 6.44e-115 351
Msa1351760 AT3G54140.1 34.495 545 308 9 17 515 22 563 3.96e-109 338
Msa1351760 AT3G54140.2 34.495 545 308 9 17 515 22 563 3.96e-109 338
Msa1351760 AT5G01180.2 33.640 544 313 7 17 515 23 563 9.23e-106 329
Msa1351760 AT5G01180.3 33.640 544 313 7 17 515 23 563 9.23e-106 329
Msa1351760 AT5G01180.1 33.640 544 313 7 17 515 23 563 9.23e-106 329
Msa1351760 AT2G02040.1 34.799 546 306 7 17 515 39 581 2.47e-105 328
Msa1351760 AT3G25280.1 36.757 555 269 16 3 512 4 521 4.27e-105 326
Msa1351760 AT3G25260.1 36.264 546 275 14 4 512 6 515 1.01e-102 319
Msa1351760 AT1G62200.1 35.714 532 287 8 17 501 50 573 1.38e-102 321
Msa1351760 AT5G13400.1 34.281 563 310 11 19 524 64 623 2.24e-100 317
Msa1351760 AT1G68570.1 36.806 576 300 14 8 524 12 582 9.27e-97 306
Msa1351760 AT1G62200.2 34.046 561 286 9 17 501 50 602 9.66e-97 307
Msa1351760 AT1G62200.3 34.046 561 286 9 17 501 64 616 1.21e-96 307
Msa1351760 AT1G68570.2 36.909 550 286 13 31 524 8 552 2.24e-93 296
Msa1351760 AT2G26690.1 35.055 542 300 10 17 513 22 556 4.62e-93 296
Msa1351760 AT2G37900.1 32.402 537 321 8 17 516 36 567 7.38e-93 295
Msa1351760 AT2G26690.2 35.660 530 286 11 29 513 4 523 6.13e-92 292
Msa1351760 AT2G40460.1 33.731 587 323 13 4 536 9 583 4.57e-91 291
Msa1351760 AT2G26690.3 35.992 514 277 10 45 513 5 511 1.15e-90 288
Msa1351760 AT2G37900.2 36.175 434 265 6 90 516 60 488 2.55e-90 286
Msa1351760 AT3G53960.1 32.044 543 323 9 17 516 35 574 1.91e-89 287
Msa1351760 AT3G21670.1 33.821 547 303 10 17 517 27 560 5.74e-89 286
Msa1351760 AT1G69870.1 33.565 575 319 12 17 532 49 619 5.98e-89 286
Msa1351760 AT3G54450.1 32.787 549 323 11 17 525 10 552 1.62e-88 284
Msa1351760 AT1G12110.1 32.865 569 326 13 17 534 25 588 1.07e-86 280
Msa1351760 AT2G02020.1 30.466 558 302 8 8 514 20 542 8.07e-86 276
Msa1351760 AT1G32450.1 31.173 571 325 13 17 532 35 592 3.15e-83 271
Msa1351760 AT4G21680.1 32.554 556 315 13 17 517 26 576 2.37e-80 263
Msa1351760 AT1G72140.1 35.590 458 253 8 75 516 122 553 2.59e-78 257
Msa1351760 AT5G46050.1 31.194 561 325 12 20 530 28 577 5.29e-77 254
Msa1351760 AT1G72130.2 33.882 425 249 7 103 518 17 418 5.98e-77 249
Msa1351760 AT1G72130.3 33.882 425 249 7 103 518 17 418 5.98e-77 249
Msa1351760 AT5G46050.2 34.581 454 270 9 90 530 26 465 5.97e-76 248
Msa1351760 AT1G72130.1 33.882 425 249 7 103 518 135 536 1.56e-75 249
Msa1351760 AT1G18880.1 34.774 486 289 11 66 528 99 579 2.05e-75 250
Msa1351760 AT5G46040.1 29.875 559 337 9 17 527 25 576 1.66e-74 248
Msa1351760 AT1G27080.1 32.000 575 329 12 7 532 4 565 5.34e-74 246
Msa1351760 AT1G22550.1 34.491 432 255 9 100 519 148 563 2.65e-73 244
Msa1351760 AT5G62680.1 33.814 485 289 13 62 520 119 597 1.13e-72 244
Msa1351760 AT1G22570.2 35.731 431 249 8 103 519 111 527 5.29e-72 239
Msa1351760 AT1G27080.2 34.581 454 277 9 88 532 81 523 6.92e-72 239
Msa1351760 AT1G22570.1 35.731 431 249 8 103 519 148 564 1.47e-71 239
Msa1351760 AT5G19640.1 28.807 545 331 13 20 521 60 590 3.42e-71 239
Msa1351760 AT1G72125.1 33.042 457 280 10 76 518 115 559 4.10e-70 235
Msa1351760 AT1G52190.1 30.249 562 325 19 5 506 6 560 4.52e-69 234
Msa1351760 AT2G02020.2 27.419 558 298 10 8 514 20 521 1.87e-67 227
Msa1351760 AT1G72120.1 32.675 456 281 8 76 519 115 556 6.87e-67 227
Msa1351760 AT3G47960.1 32.158 482 301 11 62 521 137 614 8.03e-67 228
Msa1351760 AT5G28470.2 29.690 549 333 15 17 517 15 558 7.21e-66 224
Msa1351760 AT1G22540.1 30.877 570 322 13 3 520 8 557 9.42e-66 224
Msa1351760 AT1G69860.1 30.811 555 337 9 3 516 2 550 1.57e-65 223
Msa1351760 AT3G45650.1 32.150 479 279 13 62 520 98 550 9.53e-65 221
Msa1351760 AT3G45680.1 31.875 480 291 13 62 525 96 555 3.92e-63 217
Msa1351760 AT5G28470.1 29.508 549 332 16 17 517 15 556 5.52e-63 216
Msa1351760 AT3G45710.1 29.895 475 299 12 70 528 104 560 1.55e-62 215
Msa1351760 AT3G45720.1 30.271 479 300 12 62 526 95 553 3.07e-61 211
Msa1351760 AT3G45660.1 30.600 500 296 13 51 530 89 557 3.20e-61 211
Msa1351760 AT3G45660.3 30.600 500 296 13 51 530 89 557 3.20e-61 211
Msa1351760 AT3G45660.2 30.461 499 298 12 51 530 110 578 4.70e-61 211
Msa1351760 AT3G45700.1 30.952 462 293 10 75 529 104 546 8.51e-60 207
Msa1351760 AT3G45650.2 30.495 505 279 14 62 520 98 576 2.33e-59 207
Msa1351760 AT3G16180.1 27.660 564 338 17 3 506 6 559 3.80e-57 201
Msa1351760 AT3G45690.1 28.976 459 267 12 75 525 106 513 3.52e-55 194
Msa1351760 AT5G14940.1 27.013 559 336 16 17 520 5 546 3.78e-54 192
Msa1351760 AT3G01350.1 24.552 558 362 15 17 521 5 556 1.12e-40 155
Msa1351760 AT5G11570.1 27.642 246 168 4 268 511 237 474 1.76e-24 107
Msa1351760 AT2G38100.2 23.394 436 280 14 103 514 79 484 2.81e-22 100
Msa1351760 AT2G38100.1 23.394 436 280 14 103 514 95 500 6.08e-22 99.8
Msa1351760 AT2G38100.3 23.394 436 280 14 103 514 101 506 7.49e-22 99.8

Find 154 sgRNAs with CRISPR-Local

Find 606 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAAAATTGTTTGCCTCTA+TGG 0.114323 tig0012394:-17390 None:intergenic
CTAACCCAATAAGCCTATTT+TGG 0.130669 tig0012394:+20749 Msa1351760:CDS
AATCTATTGGGCTTGAATTT+TGG 0.182486 tig0012394:-21110 None:intergenic
ATGTAGTATTATTGATTATT+TGG 0.184601 tig0012394:+21684 Msa1351760:three_prime_UTR
GAAAGCCAAAATAGGCTTAT+TGG 0.206229 tig0012394:-20754 None:intergenic
TGCAAACTCTTCAAATCTAT+TGG 0.216254 tig0012394:-21123 None:intergenic
CAGTAAATGAACCAAGTTTA+AGG 0.238647 tig0012394:-20504 None:intergenic
ATACACAAGATTGAAGATTT+TGG 0.246842 tig0012394:+21208 Msa1351760:exon
AATAGGCTTATTGGGTTAGA+TGG 0.254065 tig0012394:-20745 None:intergenic
ACTTTCTTGCTTTCCCTTGT+TGG 0.265399 tig0012394:+17880 Msa1351760:CDS
TATGATTGATTTGCTATTGT+TGG 0.269936 tig0012394:+21375 Msa1351760:three_prime_UTR
TGGATTTGAAAATACGAAAA+AGG 0.270584 tig0012394:+17297 Msa1351760:five_prime_UTR
ACAAAGAAAAGTTCATAAAT+TGG 0.278308 tig0012394:-20580 None:intergenic
GACTTGTTCTTATAGTTATA+AGG 0.282898 tig0012394:+21442 Msa1351760:three_prime_UTR
GATTCACCTTGATTTGTAAT+TGG 0.290673 tig0012394:+21475 Msa1351760:three_prime_UTR
GTAATTTGAACCTGTTCTAT+TGG 0.293896 tig0012394:+21010 Msa1351760:CDS
ATAACTATAGCTTCTTCTAT+TGG 0.302689 tig0012394:+18427 Msa1351760:CDS
CTTGATTTCCCACATGCATT+TGG 0.310576 tig0012394:-18151 None:intergenic
AAAGCCAAAATAGGCTTATT+GGG 0.316965 tig0012394:-20753 None:intergenic
TTGGTGGGACAAAACAAAAT+TGG 0.317104 tig0012394:+21166 Msa1351760:CDS
CAGGTGTTACTGGTGTTGTT+TGG 0.320066 tig0012394:+18365 Msa1351760:CDS
TGTGCACACTTTCCATGGTT+GGG 0.320615 tig0012394:-20356 None:intergenic
ATTGGAATGAAAGCCAAAAT+AGG 0.320896 tig0012394:-20762 None:intergenic
AGAGAAAGAAAGGTGGATTC+AGG 0.324478 tig0012394:+17621 Msa1351760:CDS
TCAACACTTGGAGCAATTAC+AGG 0.328425 tig0012394:+18346 Msa1351760:CDS
CTATTGGTAACATTCTTGTT+AGG 0.338130 tig0012394:-20405 None:intergenic
ACTCTGGCAGTGACAGCTTT+CGG 0.358181 tig0012394:-18995 None:intergenic
ACATGGTTATCAATGTCTAT+TGG 0.360224 tig0012394:+20886 Msa1351760:CDS
GAATGGATCAGTGGATGTTT+TGG 0.363166 tig0012394:+21255 Msa1351760:three_prime_UTR
GGAGCAATTACAGGTGTTAC+TGG 0.364098 tig0012394:+18355 Msa1351760:CDS
GCAAACTCTTCAAATCTATT+GGG 0.365937 tig0012394:-21122 None:intergenic
GTTGTCAGCATTGGACAATA+TGG 0.372340 tig0012394:+17756 Msa1351760:CDS
ATGATTGTGCTAGCTACTAT+TGG 0.377101 tig0012394:-20421 None:intergenic
TGTAACCAACCTTGTTTACT+AGG 0.382595 tig0012394:-20967 None:intergenic
AGGTGTTACTGGTGTTGTTT+GGG 0.383327 tig0012394:+18366 Msa1351760:CDS
CAATACTCTCACAAACTTCA+TGG 0.386414 tig0012394:+17852 Msa1351760:CDS
TTTACTAGGAGTAATCCTTT+TGG 0.389563 tig0012394:-20953 None:intergenic
TGATTTGCTATTGTTGGCTC+TGG 0.390594 tig0012394:+21381 Msa1351760:three_prime_UTR
ACATTGTTGGCATTGGGAAT+AGG 0.397725 tig0012394:+18217 Msa1351760:CDS
GTTCACACTTGTGGGACTCT+TGG 0.401591 tig0012394:+20810 Msa1351760:CDS
GGCTTTGTCACACTTGCTCT+TGG 0.401789 tig0012394:+18448 Msa1351760:CDS
TACACAAAGAGCTTGGCATT+GGG 0.407882 tig0012394:+18393 Msa1351760:CDS
ATCACTGACATTGTTGGCAT+TGG 0.413030 tig0012394:+18210 Msa1351760:CDS
AGTTGTGTGAAAGGTGGAAT+AGG 0.413397 tig0012394:+18172 Msa1351760:CDS
AAAATCACCAACCACCCTTC+AGG 0.414052 tig0012394:+20616 Msa1351760:CDS
AAGTGGGGTACCTATATGTT+TGG 0.421482 tig0012394:+17180 Msa1351760:five_prime_UTR
AAAATGCTTATGAAAATAAG+AGG 0.426769 tig0012394:-20553 None:intergenic
GCTGATATGTTCACACTTGT+GGG 0.431062 tig0012394:+20802 Msa1351760:CDS
AGAGGATCTATGACTGCATT+TGG 0.431468 tig0012394:+18247 Msa1351760:CDS
AGTAAACAAGGTTGGTTACA+TGG 0.442459 tig0012394:+20970 Msa1351760:CDS
AACTCAAGCTTCTCACTGAA+TGG 0.442712 tig0012394:+17597 Msa1351760:CDS
GTGCACACTTTCCATGGTTG+GGG 0.442765 tig0012394:-20355 None:intergenic
CTGATTGTGGGGCTATCTGC+TGG 0.445119 tig0012394:-18496 None:intergenic
TTACACATCACTGACATTGT+TGG 0.446683 tig0012394:+18204 Msa1351760:CDS
TATAGCGTGAGGCCCAATAA+AGG 0.448411 tig0012394:-21071 None:intergenic
TGATTAATGTTGTTACCAAA+AGG 0.448983 tig0012394:+20938 Msa1351760:CDS
TCACTGACATTGTTGGCATT+GGG 0.450521 tig0012394:+18211 Msa1351760:CDS
TGGTGGGACAAAACAAAATT+GGG 0.452142 tig0012394:+21167 Msa1351760:CDS
CTGTGCACACTTTCCATGGT+TGG 0.453175 tig0012394:-20357 None:intergenic
GTTATATCAATGACAGTGGC+TGG 0.454419 tig0012394:+20682 Msa1351760:CDS
ACCTGAGCAATTCTGATTGT+GGG 0.454685 tig0012394:-18508 None:intergenic
ATTGGACAATATGGGATTTG+TGG 0.458958 tig0012394:+17765 Msa1351760:CDS
TTGTCAGCATTGGACAATAT+GGG 0.463205 tig0012394:+17757 Msa1351760:CDS
CATGAAGTTTGTGAGAGTAT+TGG 0.463423 tig0012394:-17851 None:intergenic
GACAATGATTTCATACTTGA+AGG 0.463900 tig0012394:-20853 None:intergenic
AGCATATATATCAAATAAAG+TGG 0.474013 tig0012394:+17163 None:intergenic
CTAATCCAACACCTACCCTT+TGG 0.475526 tig0012394:-20651 None:intergenic
ATCAATCAAACCAAACATAT+AGG 0.477033 tig0012394:-17190 None:intergenic
GTACACAAAGAGCTTGGCAT+TGG 0.480459 tig0012394:+18392 Msa1351760:CDS
TAGCTAGGAACCAATAGAAC+AGG 0.487586 tig0012394:-21020 None:intergenic
GTCACTGTGCACACTTTCCA+TGG 0.487591 tig0012394:-20361 None:intergenic
TAACAACCAATTACAAATCA+AGG 0.489525 tig0012394:-21481 None:intergenic
TATAGTTCTTCGTGTGACTC+TGG 0.493826 tig0012394:-19011 None:intergenic
GTGAGAGTATTGGCAGAACT+TGG 0.496595 tig0012394:-17841 None:intergenic
TGATGTAGTGTTGTCAGCAT+TGG 0.504753 tig0012394:+17747 Msa1351760:intron
CCCCACAATCAGAATTGCTC+AGG 0.505394 tig0012394:+18507 Msa1351760:CDS
TGCTGATATGTTCACACTTG+TGG 0.513661 tig0012394:+20801 Msa1351760:CDS
TCCTATAAGAAAATCCGAAA+AGG 0.516352 tig0012394:+21794 Msa1351760:three_prime_UTR
ATAGGCTTATTGGGTTAGAT+GGG 0.520204 tig0012394:-20744 None:intergenic
ACTGAATGGAAGAGAAAGAA+AGG 0.522276 tig0012394:+17611 Msa1351760:CDS
AATTGGGAAGGTAGCATTGG+TGG 0.522466 tig0012394:+21183 Msa1351760:CDS
CAAAATTGGGAAGGTAGCAT+TGG 0.524043 tig0012394:+21180 Msa1351760:CDS
TGGAGTTGTGTGATTCCTGA+AGG 0.524331 tig0012394:-20631 None:intergenic
GACCTGAGCAATTCTGATTG+TGG 0.524605 tig0012394:-18509 None:intergenic
TTGACTACAGGTTATTGTTG+TGG 0.527192 tig0012394:+18962 Msa1351760:intron
AATAGTAAGTTCAGATGGAA+TGG 0.528307 tig0012394:-17430 None:intergenic
TTGGGAATAGGAGGGGTAAG+AGG 0.528722 tig0012394:+18229 Msa1351760:CDS
GCATATATATCAAATAAAGT+GGG 0.530998 tig0012394:+17164 None:intergenic
TTGTTGGCATTGGGAATAGG+AGG 0.534414 tig0012394:+18220 Msa1351760:CDS
GAGAAAGAAAGGTGGATTCA+GGG 0.534643 tig0012394:+17622 Msa1351760:CDS
GAAATGCCTCTCAAAATGAT+TGG 0.534664 tig0012394:+21147 Msa1351760:CDS
ACAAGAATAGTAAGTTCAGA+TGG 0.536981 tig0012394:-17435 None:intergenic
TGTGATTCCTGAAGGGTGGT+TGG 0.538574 tig0012394:-20623 None:intergenic
GGATAGTAGAAGTCAAAAGA+AGG 0.541593 tig0012394:+20704 Msa1351760:CDS
AATACTCTCACAAACTTCAT+GGG 0.541870 tig0012394:+17853 Msa1351760:CDS
ATGACAGGAATTGATGATGC+TGG 0.542287 tig0012394:-20529 None:intergenic
ATGAAAATAAGAGGGATGAC+AGG 0.544308 tig0012394:-20544 None:intergenic
GCATAGGGTGGAGACAAGAA+TGG 0.547169 tig0012394:+21233 Msa1351760:three_prime_UTR
TATGAAATAAGTCACAAAGA+TGG 0.547171 tig0012394:+19032 Msa1351760:CDS
TATGGGATTTGTGGCAAACA+TGG 0.549979 tig0012394:+17774 Msa1351760:CDS
AGGAATCACACAACTCCAAA+GGG 0.550522 tig0012394:+20636 Msa1351760:CDS
CATTGTCAACATCTTTCACA+TGG 0.551140 tig0012394:+20869 Msa1351760:CDS
TAAGACAACTAAGTATAGCT+AGG 0.551925 tig0012394:-21035 None:intergenic
AATGTAATGAACCTTAAACT+TGG 0.555453 tig0012394:+20493 Msa1351760:CDS
GGGTTAGTACACAAAGAGCT+TGG 0.556525 tig0012394:+18386 Msa1351760:CDS
TGCCTCTCAAAATGATTGGT+GGG 0.560324 tig0012394:+21151 Msa1351760:CDS
GATCAGAAGGCCTACCACCT+TGG 0.561996 tig0012394:+21734 Msa1351760:three_prime_UTR
GTAAACAAGGTTGGTTACAT+GGG 0.568847 tig0012394:+20971 Msa1351760:CDS
CACGTTCAAAAGAGATCAGA+AGG 0.569051 tig0012394:+21721 Msa1351760:three_prime_UTR
ATTAATGAAGTATTATTCCA+AGG 0.569161 tig0012394:-21751 None:intergenic
TGAGATGAAGCCACCAACAA+GGG 0.570574 tig0012394:-17893 None:intergenic
GGAGTTGTGTGATTCCTGAA+GGG 0.578116 tig0012394:-20630 None:intergenic
CATTTACATCCAAATGCATG+TGG 0.585392 tig0012394:+18142 Msa1351760:CDS
AAGTATTATTCCAAGGTGGT+AGG 0.591663 tig0012394:-21744 None:intergenic
TATAATACAGGCAGATCAAG+AGG 0.592502 tig0012394:+17565 Msa1351760:intron
GGGTGGAGACAAGAATGGAA+TGG 0.592502 tig0012394:+21238 Msa1351760:three_prime_UTR
ACATAATAAAACCCCAACCA+TGG 0.593128 tig0012394:+20344 Msa1351760:CDS
CTGAGATGAAGCCACCAACA+AGG 0.596410 tig0012394:-17894 None:intergenic
ATGCCTCTCAAAATGATTGG+TGG 0.598025 tig0012394:+21150 Msa1351760:CDS
CAAACATTCTCAGTACAACA+AGG 0.598538 tig0012394:+20469 Msa1351760:CDS
AACTCTCATTATCTCTACAA+TGG 0.601393 tig0012394:+17468 Msa1351760:exon
GGACAAGTAGTGAACCATAG+AGG 0.601486 tig0012394:+17376 Msa1351760:five_prime_UTR
CAGGAATCACACAACTCCAA+AGG 0.601675 tig0012394:+20635 Msa1351760:CDS
TTATATCAATGACAGTGGCT+GGG 0.603546 tig0012394:+20683 Msa1351760:CDS
CAACTCCAAAGGGTAGGTGT+TGG 0.605425 tig0012394:+20646 Msa1351760:CDS
TTACTCCTAGTAAACAAGGT+TGG 0.608066 tig0012394:+20962 Msa1351760:CDS
AGGATTACTCCTAGTAAACA+AGG 0.609632 tig0012394:+20958 Msa1351760:CDS
ACACAAAGAGCTTGGCATTG+GGG 0.612368 tig0012394:+18394 Msa1351760:CDS
GATAGTAGAAGTCAAAAGAA+GGG 0.613561 tig0012394:+20705 Msa1351760:CDS
AGATTTGTACTTATAGCGTG+AGG 0.615212 tig0012394:-21082 None:intergenic
GTTGGCATTGGGAATAGGAG+GGG 0.621646 tig0012394:+18222 Msa1351760:CDS
TGTTGGCATTGGGAATAGGA+GGG 0.626274 tig0012394:+18221 Msa1351760:CDS
CCTGAGCAATTCTGATTGTG+GGG 0.627004 tig0012394:-18507 None:intergenic
GTTGTGTGATTCCTGAAGGG+TGG 0.628023 tig0012394:-20627 None:intergenic
GAATGGAAGAGAAAGAAAGG+TGG 0.633493 tig0012394:+17614 Msa1351760:CDS
ATAGTGTGTGATAAGTAGCA+TGG 0.633598 tig0012394:+17350 Msa1351760:five_prime_UTR
ACAAGAATGGAATGGATCAG+TGG 0.635930 tig0012394:+21246 Msa1351760:three_prime_UTR
TAGTTCACACAAAACAAATG+AGG 0.637321 tig0012394:+19069 Msa1351760:CDS
AAATGCTTATGAAAATAAGA+GGG 0.637493 tig0012394:-20552 None:intergenic
GAGATTCTCTTAAACTACCG+TGG 0.637495 tig0012394:-21839 None:intergenic
AAATCAAGTTGTGTGAAAGG+TGG 0.639042 tig0012394:+18166 Msa1351760:CDS
GGGAAATCAAGTTGTGTGAA+AGG 0.644229 tig0012394:+18163 Msa1351760:CDS
CATATATATCAAATAAAGTG+GGG 0.659318 tig0012394:+17165 None:intergenic
ATCAGTTATATCAATGACAG+TGG 0.660619 tig0012394:+20678 Msa1351760:CDS
GTGTGATAAGTAGCATGGAG+AGG 0.661642 tig0012394:+17355 Msa1351760:five_prime_UTR
ACATACTAGTAGCAATCTCG+TGG 0.662917 tig0012394:-21301 None:intergenic
TAACAAGTAACAACACACAA+TGG 0.664958 tig0012394:+21565 Msa1351760:three_prime_UTR
GGGACAAAACAAAATTGGGA+AGG 0.670442 tig0012394:+21171 Msa1351760:CDS
ATTTACATCCAAATGCATGT+GGG 0.671883 tig0012394:+18143 Msa1351760:CDS
AAGTCACAAAGATGGAACAG+TGG 0.681162 tig0012394:+19040 Msa1351760:CDS
AAACATTCTCAGTACAACAA+GGG 0.685525 tig0012394:+20470 Msa1351760:CDS
AATGAAGTATTATTCCAAGG+TGG 0.690245 tig0012394:-21748 None:intergenic
ATGAAGTAATGTCAATACCA+CGG 0.691362 tig0012394:+21822 Msa1351760:three_prime_UTR
ATCACACAACTCCAAAGGGT+AGG 0.702036 tig0012394:+20640 Msa1351760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATTTTTTACTGTTT+TGG + tig0012394:17277-17296 Msa1351760:five_prime_UTR 10.0%
!! TTAAGTAATTACAAAAATTT+AGG - tig0012394:18863-18882 None:intergenic 10.0%
!!! TCATTAATCATTTTTAATTA+AGG + tig0012394:21766-21785 Msa1351760:three_prime_UTR 10.0%
!!! ATTTTTATTTTTTACTGTTT+TGG + tig0012394:17277-17296 Msa1351760:five_prime_UTR 10.0%
!! TTAAGTAATTACAAAAATTT+AGG - tig0012394:18863-18882 None:intergenic 10.0%
!!! TCATTAATCATTTTTAATTA+AGG + tig0012394:21766-21785 Msa1351760:three_prime_UTR 10.0%
!!! TATTATTGAAGTTTTAAGAA+GGG - tig0012394:17255-17274 None:intergenic 15.0%
!!! AGCTTAGTTTTATATTTTTA+TGG + tig0012394:17799-17818 Msa1351760:CDS 15.0%
!!! TTTTTTGATATAACATTTGT+AGG + tig0012394:18084-18103 Msa1351760:intron 15.0%
!! AGTTGAAATTAATTAATGTA+TGG - tig0012394:18664-18683 None:intergenic 15.0%
!! TTAGTAAATGAATGTTAATA+AGG + tig0012394:18718-18737 Msa1351760:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - tig0012394:19804-19823 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - tig0012394:19803-19822 None:intergenic 15.0%
!! AAAGTGAAATATATTGTATT+GGG - tig0012394:19312-19331 None:intergenic 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG - tig0012394:19739-19758 None:intergenic 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG - tig0012394:19738-19757 None:intergenic 15.0%
!! GACAATTAAAAGAAAAATAA+TGG + tig0012394:19438-19457 Msa1351760:intron 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG + tig0012394:19738-19757 Msa1351760:intron 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG + tig0012394:19739-19758 Msa1351760:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + tig0012394:19803-19822 Msa1351760:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + tig0012394:19804-19823 Msa1351760:intron 15.0%
!!! ATGTAGTATTATTGATTATT+TGG + tig0012394:21684-21703 Msa1351760:three_prime_UTR 15.0%
!!! TTAATCATTTTTAATTAAGG+TGG + tig0012394:21769-21788 Msa1351760:three_prime_UTR 15.0%
!!! TATTATTGAAGTTTTAAGAA+GGG - tig0012394:17255-17274 None:intergenic 15.0%
!!! AGCTTAGTTTTATATTTTTA+TGG + tig0012394:17799-17818 Msa1351760:CDS 15.0%
!!! TTTTTTGATATAACATTTGT+AGG + tig0012394:18084-18103 Msa1351760:intron 15.0%
!! AGTTGAAATTAATTAATGTA+TGG - tig0012394:18664-18683 None:intergenic 15.0%
!! TTAGTAAATGAATGTTAATA+AGG + tig0012394:18718-18737 Msa1351760:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - tig0012394:19804-19823 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - tig0012394:19803-19822 None:intergenic 15.0%
!! AAAGTGAAATATATTGTATT+GGG - tig0012394:19312-19331 None:intergenic 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG - tig0012394:19739-19758 None:intergenic 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG - tig0012394:19738-19757 None:intergenic 15.0%
!! GACAATTAAAAGAAAAATAA+TGG + tig0012394:19438-19457 Msa1351760:intron 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG + tig0012394:19738-19757 Msa1351760:intron 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG + tig0012394:19739-19758 Msa1351760:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + tig0012394:19803-19822 Msa1351760:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + tig0012394:19804-19823 Msa1351760:intron 15.0%
!!! ATGTAGTATTATTGATTATT+TGG + tig0012394:21684-21703 Msa1351760:three_prime_UTR 15.0%
!!! TTAATCATTTTTAATTAAGG+TGG + tig0012394:21769-21788 Msa1351760:three_prime_UTR 15.0%
!!! GTATTATTGAAGTTTTAAGA+AGG - tig0012394:17256-17275 None:intergenic 20.0%
!! AGTTTCAAATCTTATAATAC+AGG + tig0012394:17553-17572 Msa1351760:intron 20.0%
!! AAAAAAACTAAACTCTTTGT+TGG + tig0012394:17674-17693 Msa1351760:intron 20.0%
!! AAAGACTAAACAATATTACT+TGG - tig0012394:18600-18619 None:intergenic 20.0%
!!! TAAAATACTTTATTGACTAC+AGG + tig0012394:18950-18969 Msa1351760:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - tig0012394:19873-19892 None:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - tig0012394:19837-19856 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - tig0012394:19836-19855 None:intergenic 20.0%
!! GAAAGTGAAATATATTGTAT+TGG - tig0012394:19313-19332 None:intergenic 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG - tig0012394:19740-19759 None:intergenic 20.0%
!! CAAATCTATATTGAAGAAAA+TGG + tig0012394:19548-19567 Msa1351760:intron 20.0%
!! CATAACTATATTGAAGAAAA+TGG + tig0012394:19650-19669 Msa1351760:intron 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG + tig0012394:19740-19759 Msa1351760:intron 20.0%
!! AAAGTGGAATATATTGTATT+GGG + tig0012394:19763-19782 Msa1351760:intron 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + tig0012394:19836-19855 Msa1351760:intron 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + tig0012394:19837-19856 Msa1351760:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + tig0012394:19873-19892 Msa1351760:intron 20.0%
!!! TGACAGATATTTTATACTAA+TGG - tig0012394:20122-20141 None:intergenic 20.0%
!!! AACATTTTAATATGCATGTT+TGG - tig0012394:20275-20294 None:intergenic 20.0%
!! ACATGCATATTAAAATGTTA+TGG + tig0012394:20276-20295 Msa1351760:intron 20.0%
!! AAATGCTTATGAAAATAAGA+GGG - tig0012394:20555-20574 None:intergenic 20.0%
!! AAAATGCTTATGAAAATAAG+AGG - tig0012394:20556-20575 None:intergenic 20.0%
!! ACAAAGAAAAGTTCATAAAT+TGG - tig0012394:20583-20602 None:intergenic 20.0%
!!! ACTCTTGGAATTTTTTTATA+GGG + tig0012394:20825-20844 Msa1351760:CDS 20.0%
!!! ATTTTTTCAACTACCTTTAT+TGG + tig0012394:21058-21077 Msa1351760:CDS 20.0%
!!! TTTTTTCAACTACCTTTATT+GGG + tig0012394:21059-21078 Msa1351760:CDS 20.0%
!!! ATCTTGTTTTCAGATTTTAA+AGG + tig0012394:21408-21427 Msa1351760:three_prime_UTR 20.0%
!!! ATTAATGAAGTATTATTCCA+AGG - tig0012394:21754-21773 None:intergenic 20.0%
!!! GTATTATTGAAGTTTTAAGA+AGG - tig0012394:17256-17275 None:intergenic 20.0%
!! AGTTTCAAATCTTATAATAC+AGG + tig0012394:17553-17572 Msa1351760:intron 20.0%
!! AAAAAAACTAAACTCTTTGT+TGG + tig0012394:17674-17693 Msa1351760:intron 20.0%
!! AAAGACTAAACAATATTACT+TGG - tig0012394:18600-18619 None:intergenic 20.0%
!!! TAAAATACTTTATTGACTAC+AGG + tig0012394:18950-18969 Msa1351760:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - tig0012394:19873-19892 None:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - tig0012394:19837-19856 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - tig0012394:19836-19855 None:intergenic 20.0%
!! GAAAGTGAAATATATTGTAT+TGG - tig0012394:19313-19332 None:intergenic 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG - tig0012394:19740-19759 None:intergenic 20.0%
!! CAAATCTATATTGAAGAAAA+TGG + tig0012394:19548-19567 Msa1351760:intron 20.0%
!! CATAACTATATTGAAGAAAA+TGG + tig0012394:19650-19669 Msa1351760:intron 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG + tig0012394:19740-19759 Msa1351760:intron 20.0%
!! AAAGTGGAATATATTGTATT+GGG + tig0012394:19763-19782 Msa1351760:intron 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + tig0012394:19836-19855 Msa1351760:intron 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + tig0012394:19837-19856 Msa1351760:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + tig0012394:19873-19892 Msa1351760:intron 20.0%
!!! TGACAGATATTTTATACTAA+TGG - tig0012394:20122-20141 None:intergenic 20.0%
!!! AACATTTTAATATGCATGTT+TGG - tig0012394:20275-20294 None:intergenic 20.0%
!! ACATGCATATTAAAATGTTA+TGG + tig0012394:20276-20295 Msa1351760:intron 20.0%
!! AAATGCTTATGAAAATAAGA+GGG - tig0012394:20555-20574 None:intergenic 20.0%
!! AAAATGCTTATGAAAATAAG+AGG - tig0012394:20556-20575 None:intergenic 20.0%
!! ACAAAGAAAAGTTCATAAAT+TGG - tig0012394:20583-20602 None:intergenic 20.0%
!!! ACTCTTGGAATTTTTTTATA+GGG + tig0012394:20825-20844 Msa1351760:CDS 20.0%
!!! ATTTTTTCAACTACCTTTAT+TGG + tig0012394:21058-21077 Msa1351760:CDS 20.0%
!!! TTTTTTCAACTACCTTTATT+GGG + tig0012394:21059-21078 Msa1351760:CDS 20.0%
!!! ATCTTGTTTTCAGATTTTAA+AGG + tig0012394:21408-21427 Msa1351760:three_prime_UTR 20.0%
!!! ATTAATGAAGTATTATTCCA+AGG - tig0012394:21754-21773 None:intergenic 20.0%
! ATCAATCAAACCAAACATAT+AGG - tig0012394:17193-17212 None:intergenic 25.0%
! TGGATTTGAAAATACGAAAA+AGG + tig0012394:17297-17316 Msa1351760:five_prime_UTR 25.0%
! AAACTCATCAAATATATGCA+TGG - tig0012394:17538-17557 None:intergenic 25.0%
! GTTAACATGATCAATAGTTT+AGG - tig0012394:17982-18001 None:intergenic 25.0%
!! TTGGATCTTTTTCTTCAAAT+TGG - tig0012394:18279-18298 None:intergenic 25.0%
! ATAACTATAGCTTCTTCTAT+TGG + tig0012394:18427-18446 Msa1351760:CDS 25.0%
!! TGTATGGTACTTTTACAATA+GGG - tig0012394:18648-18667 None:intergenic 25.0%
!! ATGTATGGTACTTTTACAAT+AGG - tig0012394:18649-18668 None:intergenic 25.0%
! TATATCACACACTTACATTA+GGG + tig0012394:18773-18792 Msa1351760:intron 25.0%
! TATGAAATAAGTCACAAAGA+TGG + tig0012394:19032-19051 Msa1351760:CDS 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - tig0012394:19872-19891 None:intergenic 25.0%
! CAAAGTAGGTCAATTAAATT+GGG + tig0012394:19372-19391 Msa1351760:intron 25.0%
! CAATATAGATTTGTAGTAGT+GGG - tig0012394:19541-19560 None:intergenic 25.0%
! TCAATATAGATTTGTAGTAG+TGG - tig0012394:19542-19561 None:intergenic 25.0%
! TGTGTTTAGCAATTTATACA+CGG - tig0012394:19604-19623 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + tig0012394:19762-19781 Msa1351760:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + tig0012394:19872-19891 Msa1351760:intron 25.0%
! TGTGTTTAGCAATTTATACA+CGG - tig0012394:19604-19623 None:intergenic 25.0%
!!! GGTTTTATTATGTATTCTTG+GGG - tig0012394:20337-20356 None:intergenic 25.0%
!!! GGGTTTTATTATGTATTCTT+GGG - tig0012394:20338-20357 None:intergenic 25.0%
! AATGTAATGAACCTTAAACT+TGG + tig0012394:20493-20512 Msa1351760:CDS 25.0%
!!! GACTCTTGGAATTTTTTTAT+AGG + tig0012394:20824-20843 Msa1351760:CDS 25.0%
! TGATTAATGTTGTTACCAAA+AGG + tig0012394:20938-20957 Msa1351760:CDS 25.0%
!! ATACACAAGATTGAAGATTT+TGG + tig0012394:21208-21227 Msa1351760:exon 25.0%
!!! TATGATTGATTTGCTATTGT+TGG + tig0012394:21375-21394 Msa1351760:three_prime_UTR 25.0%
! TAAGAACAAGTCAAAAAAGA+AGG - tig0012394:21434-21453 None:intergenic 25.0%
!! GACTTGTTCTTATAGTTATA+AGG + tig0012394:21442-21461 Msa1351760:three_prime_UTR 25.0%
! TAACAACCAATTACAAATCA+AGG - tig0012394:21484-21503 None:intergenic 25.0%
!! TTACTTCATTCTAACCTTTT+CGG - tig0012394:21811-21830 None:intergenic 25.0%
! ATCAATCAAACCAAACATAT+AGG - tig0012394:17193-17212 None:intergenic 25.0%
! TGGATTTGAAAATACGAAAA+AGG + tig0012394:17297-17316 Msa1351760:five_prime_UTR 25.0%
! AAACTCATCAAATATATGCA+TGG - tig0012394:17538-17557 None:intergenic 25.0%
! GTTAACATGATCAATAGTTT+AGG - tig0012394:17982-18001 None:intergenic 25.0%
!! TTGGATCTTTTTCTTCAAAT+TGG - tig0012394:18279-18298 None:intergenic 25.0%
! ATAACTATAGCTTCTTCTAT+TGG + tig0012394:18427-18446 Msa1351760:CDS 25.0%
!! TGTATGGTACTTTTACAATA+GGG - tig0012394:18648-18667 None:intergenic 25.0%
!! ATGTATGGTACTTTTACAAT+AGG - tig0012394:18649-18668 None:intergenic 25.0%
! TATATCACACACTTACATTA+GGG + tig0012394:18773-18792 Msa1351760:intron 25.0%
! TATGAAATAAGTCACAAAGA+TGG + tig0012394:19032-19051 Msa1351760:CDS 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - tig0012394:19872-19891 None:intergenic 25.0%
! CAAAGTAGGTCAATTAAATT+GGG + tig0012394:19372-19391 Msa1351760:intron 25.0%
! CAATATAGATTTGTAGTAGT+GGG - tig0012394:19541-19560 None:intergenic 25.0%
! TCAATATAGATTTGTAGTAG+TGG - tig0012394:19542-19561 None:intergenic 25.0%
! TGTGTTTAGCAATTTATACA+CGG - tig0012394:19604-19623 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + tig0012394:19762-19781 Msa1351760:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + tig0012394:19872-19891 Msa1351760:intron 25.0%
! TGTGTTTAGCAATTTATACA+CGG - tig0012394:19604-19623 None:intergenic 25.0%
!!! GGTTTTATTATGTATTCTTG+GGG - tig0012394:20337-20356 None:intergenic 25.0%
!!! GGGTTTTATTATGTATTCTT+GGG - tig0012394:20338-20357 None:intergenic 25.0%
! AATGTAATGAACCTTAAACT+TGG + tig0012394:20493-20512 Msa1351760:CDS 25.0%
!!! GACTCTTGGAATTTTTTTAT+AGG + tig0012394:20824-20843 Msa1351760:CDS 25.0%
! TGATTAATGTTGTTACCAAA+AGG + tig0012394:20938-20957 Msa1351760:CDS 25.0%
!! ATACACAAGATTGAAGATTT+TGG + tig0012394:21208-21227 Msa1351760:exon 25.0%
!!! TATGATTGATTTGCTATTGT+TGG + tig0012394:21375-21394 Msa1351760:three_prime_UTR 25.0%
! TAAGAACAAGTCAAAAAAGA+AGG - tig0012394:21434-21453 None:intergenic 25.0%
!! GACTTGTTCTTATAGTTATA+AGG + tig0012394:21442-21461 Msa1351760:three_prime_UTR 25.0%
! TAACAACCAATTACAAATCA+AGG - tig0012394:21484-21503 None:intergenic 25.0%
!! TTACTTCATTCTAACCTTTT+CGG - tig0012394:21811-21830 None:intergenic 25.0%
TTGAAAATACGAAAAAGGTG+AGG + tig0012394:17302-17321 Msa1351760:five_prime_UTR 30.0%
AATAGTAAGTTCAGATGGAA+TGG - tig0012394:17433-17452 None:intergenic 30.0%
ACAAGAATAGTAAGTTCAGA+TGG - tig0012394:17438-17457 None:intergenic 30.0%
AACTCTCATTATCTCTACAA+TGG + tig0012394:17468-17487 Msa1351760:exon 30.0%
TCATTATCTCTACAATGGTA+AGG + tig0012394:17473-17492 Msa1351760:intron 30.0%
CAAATATATGCATGGAAACA+AGG - tig0012394:17530-17549 None:intergenic 30.0%
!! AGGGCTTCTATGTTTATTTT+TGG + tig0012394:17641-17660 Msa1351760:CDS 30.0%
AATACTCTCACAAACTTCAT+GGG + tig0012394:17853-17872 Msa1351760:CDS 30.0%
GATATAACATTTGTAGGCTT+TGG + tig0012394:18090-18109 Msa1351760:intron 30.0%
ATTTACATCCAAATGCATGT+GGG + tig0012394:18143-18162 Msa1351760:CDS 30.0%
TGAAGAAAAAGATCCAAATG+AGG + tig0012394:18282-18301 Msa1351760:CDS 30.0%
!!! CACTTGCAAGTTTTTTCAAT+TGG + tig0012394:18311-18330 Msa1351760:CDS 30.0%
!!! GGAGTTTTGATTCTATAGAA+AGG - tig0012394:18478-18497 None:intergenic 30.0%
AGTCTTTGTACATACTTTAG+TGG + tig0012394:18613-18632 Msa1351760:intron 30.0%
TAATAAGGTCAATATCTGCT+AGG + tig0012394:18733-18752 Msa1351760:intron 30.0%
GTATATCACACACTTACATT+AGG + tig0012394:18772-18791 Msa1351760:intron 30.0%
!!! TGCATGCTTTTTTAATCTCT+AGG + tig0012394:18833-18852 Msa1351760:intron 30.0%
TAGTTCACACAAAACAAATG+AGG + tig0012394:19069-19088 Msa1351760:CDS 30.0%
!! TTTGAGTTGAGTATGAATGA+AGG - tig0012394:19110-19129 None:intergenic 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG - tig0012394:19851-19870 None:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG - tig0012394:19850-19869 None:intergenic 30.0%
CCAATTTAATTGACCTACTT+TGG - tig0012394:19374-19393 None:intergenic 30.0%
CCAAAGTAGGTCAATTAAAT+TGG + tig0012394:19371-19390 Msa1351760:intron 30.0%
TAATTGTCTTGTCAATTTGC+AGG - tig0012394:19426-19445 None:intergenic 30.0%
AAAATAATGGTCCAGCAAAT+AGG + tig0012394:19451-19470 Msa1351760:intron 30.0%
ATAGGCATGTTATGTAAGTT+AGG + tig0012394:19469-19488 Msa1351760:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG + tig0012394:19747-19766 Msa1351760:intron 30.0%
! TTGAAATGGGTCAGTTATTT+TGG + tig0012394:19850-19869 Msa1351760:intron 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG + tig0012394:19851-19870 Msa1351760:intron 30.0%
TGTTCTTTATCATTACCTCT+TGG - tig0012394:19992-20011 None:intergenic 30.0%
! CCTAAGTTGCATATTTTTCA+GGG - tig0012394:20055-20074 None:intergenic 30.0%
CCTGAAAAATATGCAACTTA+GGG + tig0012394:20053-20072 Msa1351760:intron 30.0%
AACAAAAAACGAAGCTACAA+AGG - tig0012394:20094-20113 None:intergenic 30.0%
!!! ATCTGTCACTTTCATTTTTC+AGG + tig0012394:20134-20153 Msa1351760:intron 30.0%
!! ATGTTATGGTTTGTTGAATC+AGG + tig0012394:20290-20309 Msa1351760:intron 30.0%
!!! GGGGTTTTATTATGTATTCT+TGG - tig0012394:20339-20358 None:intergenic 30.0%
! CTATTGGTAACATTCTTGTT+AGG - tig0012394:20408-20427 None:intergenic 30.0%
AAACATTCTCAGTACAACAA+GGG + tig0012394:20470-20489 Msa1351760:CDS 30.0%
CAGTAAATGAACCAAGTTTA+AGG - tig0012394:20507-20526 None:intergenic 30.0%
!! TTGGTGATTTTTCTTGCAAA+TGG - tig0012394:20607-20626 None:intergenic 30.0%
ATCAGTTATATCAATGACAG+TGG + tig0012394:20678-20697 Msa1351760:CDS 30.0%
GATAGTAGAAGTCAAAAGAA+GGG + tig0012394:20705-20724 Msa1351760:CDS 30.0%
AAAGCCAAAATAGGCTTATT+GGG - tig0012394:20756-20775 None:intergenic 30.0%
ATTGGAATGAAAGCCAAAAT+AGG - tig0012394:20765-20784 None:intergenic 30.0%
!!! TTTTGGCTTTCATTCCAATA+TGG + tig0012394:20766-20785 Msa1351760:CDS 30.0%
! TCATTCCAATATGGCATTTT+TGG + tig0012394:20775-20794 Msa1351760:CDS 30.0%
CAATACCAAAAATGCCATAT+TGG - tig0012394:20783-20802 None:intergenic 30.0%
GACAATGATTTCATACTTGA+AGG - tig0012394:20856-20875 None:intergenic 30.0%
ACATGGTTATCAATGTCTAT+TGG + tig0012394:20886-20905 Msa1351760:CDS 30.0%
! TTTACTAGGAGTAATCCTTT+TGG - tig0012394:20956-20975 None:intergenic 30.0%
GTAATTTGAACCTGTTCTAT+TGG + tig0012394:21010-21029 Msa1351760:CDS 30.0%
TAAGACAACTAAGTATAGCT+AGG - tig0012394:21038-21057 None:intergenic 30.0%
! AATCTATTGGGCTTGAATTT+TGG - tig0012394:21113-21132 None:intergenic 30.0%
GCAAACTCTTCAAATCTATT+GGG - tig0012394:21125-21144 None:intergenic 30.0%
TGCAAACTCTTCAAATCTAT+TGG - tig0012394:21126-21145 None:intergenic 30.0%
!! ATTGAAGATTTTGGAAGCAT+AGG + tig0012394:21217-21236 Msa1351760:exon 30.0%
!! TTGAAGATTTTGGAAGCATA+GGG + tig0012394:21218-21237 Msa1351760:exon 30.0%
! ATGTACTAAGCTTTTGATAG+TGG + tig0012394:21320-21339 Msa1351760:three_prime_UTR 30.0%
!! GATTCACCTTGATTTGTAAT+TGG + tig0012394:21475-21494 Msa1351760:three_prime_UTR 30.0%
TAACAAGTAACAACACACAA+TGG + tig0012394:21565-21584 Msa1351760:three_prime_UTR 30.0%
! AATGAAGTATTATTCCAAGG+TGG - tig0012394:21751-21770 None:intergenic 30.0%
TCCTATAAGAAAATCCGAAA+AGG + tig0012394:21794-21813 Msa1351760:three_prime_UTR 30.0%
! ACCTTTTCGGATTTTCTTAT+AGG - tig0012394:21798-21817 None:intergenic 30.0%
ATGAAGTAATGTCAATACCA+CGG + tig0012394:21822-21841 Msa1351760:three_prime_UTR 30.0%
TTGAAAATACGAAAAAGGTG+AGG + tig0012394:17302-17321 Msa1351760:five_prime_UTR 30.0%
AATAGTAAGTTCAGATGGAA+TGG - tig0012394:17433-17452 None:intergenic 30.0%
ACAAGAATAGTAAGTTCAGA+TGG - tig0012394:17438-17457 None:intergenic 30.0%
AACTCTCATTATCTCTACAA+TGG + tig0012394:17468-17487 Msa1351760:exon 30.0%
TCATTATCTCTACAATGGTA+AGG + tig0012394:17473-17492 Msa1351760:intron 30.0%
CAAATATATGCATGGAAACA+AGG - tig0012394:17530-17549 None:intergenic 30.0%
!! AGGGCTTCTATGTTTATTTT+TGG + tig0012394:17641-17660 Msa1351760:CDS 30.0%
AATACTCTCACAAACTTCAT+GGG + tig0012394:17853-17872 Msa1351760:CDS 30.0%
GATATAACATTTGTAGGCTT+TGG + tig0012394:18090-18109 Msa1351760:intron 30.0%
ATTTACATCCAAATGCATGT+GGG + tig0012394:18143-18162 Msa1351760:CDS 30.0%
TGAAGAAAAAGATCCAAATG+AGG + tig0012394:18282-18301 Msa1351760:CDS 30.0%
!!! CACTTGCAAGTTTTTTCAAT+TGG + tig0012394:18311-18330 Msa1351760:CDS 30.0%
!!! GGAGTTTTGATTCTATAGAA+AGG - tig0012394:18478-18497 None:intergenic 30.0%
AGTCTTTGTACATACTTTAG+TGG + tig0012394:18613-18632 Msa1351760:intron 30.0%
TAATAAGGTCAATATCTGCT+AGG + tig0012394:18733-18752 Msa1351760:intron 30.0%
GTATATCACACACTTACATT+AGG + tig0012394:18772-18791 Msa1351760:intron 30.0%
!!! TGCATGCTTTTTTAATCTCT+AGG + tig0012394:18833-18852 Msa1351760:intron 30.0%
TAGTTCACACAAAACAAATG+AGG + tig0012394:19069-19088 Msa1351760:CDS 30.0%
!! TTTGAGTTGAGTATGAATGA+AGG - tig0012394:19110-19129 None:intergenic 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG - tig0012394:19851-19870 None:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG - tig0012394:19850-19869 None:intergenic 30.0%
CCAATTTAATTGACCTACTT+TGG - tig0012394:19374-19393 None:intergenic 30.0%
CCAAAGTAGGTCAATTAAAT+TGG + tig0012394:19371-19390 Msa1351760:intron 30.0%
TAATTGTCTTGTCAATTTGC+AGG - tig0012394:19426-19445 None:intergenic 30.0%
AAAATAATGGTCCAGCAAAT+AGG + tig0012394:19451-19470 Msa1351760:intron 30.0%
ATAGGCATGTTATGTAAGTT+AGG + tig0012394:19469-19488 Msa1351760:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG + tig0012394:19747-19766 Msa1351760:intron 30.0%
! TTGAAATGGGTCAGTTATTT+TGG + tig0012394:19850-19869 Msa1351760:intron 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG + tig0012394:19851-19870 Msa1351760:intron 30.0%
TGTTCTTTATCATTACCTCT+TGG - tig0012394:19992-20011 None:intergenic 30.0%
! CCTAAGTTGCATATTTTTCA+GGG - tig0012394:20055-20074 None:intergenic 30.0%
CCTGAAAAATATGCAACTTA+GGG + tig0012394:20053-20072 Msa1351760:intron 30.0%
AACAAAAAACGAAGCTACAA+AGG - tig0012394:20094-20113 None:intergenic 30.0%
!!! ATCTGTCACTTTCATTTTTC+AGG + tig0012394:20134-20153 Msa1351760:intron 30.0%
!! ATGTTATGGTTTGTTGAATC+AGG + tig0012394:20290-20309 Msa1351760:intron 30.0%
!!! GGGGTTTTATTATGTATTCT+TGG - tig0012394:20339-20358 None:intergenic 30.0%
! CTATTGGTAACATTCTTGTT+AGG - tig0012394:20408-20427 None:intergenic 30.0%
AAACATTCTCAGTACAACAA+GGG + tig0012394:20470-20489 Msa1351760:CDS 30.0%
CAGTAAATGAACCAAGTTTA+AGG - tig0012394:20507-20526 None:intergenic 30.0%
!! TTGGTGATTTTTCTTGCAAA+TGG - tig0012394:20607-20626 None:intergenic 30.0%
ATCAGTTATATCAATGACAG+TGG + tig0012394:20678-20697 Msa1351760:CDS 30.0%
GATAGTAGAAGTCAAAAGAA+GGG + tig0012394:20705-20724 Msa1351760:CDS 30.0%
AAAGCCAAAATAGGCTTATT+GGG - tig0012394:20756-20775 None:intergenic 30.0%
ATTGGAATGAAAGCCAAAAT+AGG - tig0012394:20765-20784 None:intergenic 30.0%
!!! TTTTGGCTTTCATTCCAATA+TGG + tig0012394:20766-20785 Msa1351760:CDS 30.0%
! TCATTCCAATATGGCATTTT+TGG + tig0012394:20775-20794 Msa1351760:CDS 30.0%
CAATACCAAAAATGCCATAT+TGG - tig0012394:20783-20802 None:intergenic 30.0%
GACAATGATTTCATACTTGA+AGG - tig0012394:20856-20875 None:intergenic 30.0%
ACATGGTTATCAATGTCTAT+TGG + tig0012394:20886-20905 Msa1351760:CDS 30.0%
! TTTACTAGGAGTAATCCTTT+TGG - tig0012394:20956-20975 None:intergenic 30.0%
GTAATTTGAACCTGTTCTAT+TGG + tig0012394:21010-21029 Msa1351760:CDS 30.0%
TAAGACAACTAAGTATAGCT+AGG - tig0012394:21038-21057 None:intergenic 30.0%
! AATCTATTGGGCTTGAATTT+TGG - tig0012394:21113-21132 None:intergenic 30.0%
GCAAACTCTTCAAATCTATT+GGG - tig0012394:21125-21144 None:intergenic 30.0%
TGCAAACTCTTCAAATCTAT+TGG - tig0012394:21126-21145 None:intergenic 30.0%
!! ATTGAAGATTTTGGAAGCAT+AGG + tig0012394:21217-21236 Msa1351760:exon 30.0%
!! TTGAAGATTTTGGAAGCATA+GGG + tig0012394:21218-21237 Msa1351760:exon 30.0%
! ATGTACTAAGCTTTTGATAG+TGG + tig0012394:21320-21339 Msa1351760:three_prime_UTR 30.0%
!! GATTCACCTTGATTTGTAAT+TGG + tig0012394:21475-21494 Msa1351760:three_prime_UTR 30.0%
TAACAAGTAACAACACACAA+TGG + tig0012394:21565-21584 Msa1351760:three_prime_UTR 30.0%
! AATGAAGTATTATTCCAAGG+TGG - tig0012394:21751-21770 None:intergenic 30.0%
TCCTATAAGAAAATCCGAAA+AGG + tig0012394:21794-21813 Msa1351760:three_prime_UTR 30.0%
! ACCTTTTCGGATTTTCTTAT+AGG - tig0012394:21798-21817 None:intergenic 30.0%
ATGAAGTAATGTCAATACCA+CGG + tig0012394:21822-21841 Msa1351760:three_prime_UTR 30.0%
ATAGTGTGTGATAAGTAGCA+TGG + tig0012394:17350-17369 Msa1351760:five_prime_UTR 35.0%
CTCAAAATTGTTTGCCTCTA+TGG - tig0012394:17393-17412 None:intergenic 35.0%
TATAATACAGGCAGATCAAG+AGG + tig0012394:17565-17584 Msa1351760:intron 35.0%
ACTGAATGGAAGAGAAAGAA+AGG + tig0012394:17611-17630 Msa1351760:CDS 35.0%
! TTGTCAGCATTGGACAATAT+GGG + tig0012394:17757-17776 Msa1351760:CDS 35.0%
ATTGGACAATATGGGATTTG+TGG + tig0012394:17765-17784 Msa1351760:CDS 35.0%
! CATGAAGTTTGTGAGAGTAT+TGG - tig0012394:17854-17873 None:intergenic 35.0%
CAATACTCTCACAAACTTCA+TGG + tig0012394:17852-17871 Msa1351760:CDS 35.0%
!! TTTTGGATCTCTAGAAGTTC+TGG + tig0012394:17951-17970 Msa1351760:intron 35.0%
CTTCTGATCAAATGTGTGTA+TGG - tig0012394:18006-18025 None:intergenic 35.0%
! ACACATTTGATCAGAAGTGT+TGG + tig0012394:18009-18028 Msa1351760:intron 35.0%
CATTTACATCCAAATGCATG+TGG + tig0012394:18142-18161 Msa1351760:CDS 35.0%
! AAATCAAGTTGTGTGAAAGG+TGG + tig0012394:18166-18185 Msa1351760:CDS 35.0%
TTACACATCACTGACATTGT+TGG + tig0012394:18204-18223 Msa1351760:CDS 35.0%
! CTTTTGCTTAGTTCAACACT+TGG + tig0012394:18334-18353 Msa1351760:CDS 35.0%
!! TGTACATACTTTAGTGGACT+TGG + tig0012394:18619-18638 Msa1351760:intron 35.0%
AAGCATGCAGTAACATAGTT+TGG - tig0012394:18822-18841 None:intergenic 35.0%
TTGACTACAGGTTATTGTTG+TGG + tig0012394:18962-18981 Msa1351760:intron 35.0%
ATGAATGAAGGAAGATTGGA+AGG - tig0012394:19098-19117 None:intergenic 35.0%
GAGTATGAATGAAGGAAGAT+TGG - tig0012394:19102-19121 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG - tig0012394:19886-19905 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG + tig0012394:19358-19377 Msa1351760:intron 35.0%
GTAGGTCAATTAAATTGGGA+CGG + tig0012394:19376-19395 Msa1351760:intron 35.0%
TACATAACATGCCTATTTGC+TGG - tig0012394:19465-19484 None:intergenic 35.0%
! TTTTCCATGTACATCGTAGT+AGG + tig0012394:19496-19515 Msa1351760:intron 35.0%
CAAAGTAGGTCAATTAAACC+GGG - tig0012394:19703-19722 None:intergenic 35.0%
CCAAAGTAGGTCAATTAAAC+CGG - tig0012394:19704-19723 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - tig0012394:19358-19377 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+TGG + tig0012394:19886-19905 Msa1351760:intron 35.0%
GAAAATGGGTCAGTTATTCT+GGG + tig0012394:19887-19906 Msa1351760:intron 35.0%
! AGTTTTCTGACATAACCAAG+AGG + tig0012394:19974-19993 Msa1351760:intron 35.0%
CCCTGAAAAATATGCAACTT+AGG + tig0012394:20052-20071 Msa1351760:intron 35.0%
! CCCTAAGTTGCATATTTTTC+AGG - tig0012394:20056-20075 None:intergenic 35.0%
AAAAAACGAAGCTACAAAGG+TGG - tig0012394:20091-20110 None:intergenic 35.0%
GATATATGAAGCTGCATAAG+TGG - tig0012394:20173-20192 None:intergenic 35.0%
ACATAATAAAACCCCAACCA+TGG + tig0012394:20344-20363 Msa1351760:CDS 35.0%
ATGATTGTGCTAGCTACTAT+TGG - tig0012394:20424-20443 None:intergenic 35.0%
CAAACATTCTCAGTACAACA+AGG + tig0012394:20469-20488 Msa1351760:CDS 35.0%
ATGAAAATAAGAGGGATGAC+AGG - tig0012394:20547-20566 None:intergenic 35.0%
TTATATCAATGACAGTGGCT+GGG + tig0012394:20683-20702 Msa1351760:CDS 35.0%
GGATAGTAGAAGTCAAAAGA+AGG + tig0012394:20704-20723 Msa1351760:CDS 35.0%
! TAGATGGGTCTTTTCTACTT+TGG - tig0012394:20732-20751 None:intergenic 35.0%
! ATAGGCTTATTGGGTTAGAT+GGG - tig0012394:20747-20766 None:intergenic 35.0%
! AATAGGCTTATTGGGTTAGA+TGG - tig0012394:20748-20767 None:intergenic 35.0%
! CTAACCCAATAAGCCTATTT+TGG + tig0012394:20749-20768 Msa1351760:CDS 35.0%
GAAAGCCAAAATAGGCTTAT+TGG - tig0012394:20757-20776 None:intergenic 35.0%
CATTGTCAACATCTTTCACA+TGG + tig0012394:20869-20888 Msa1351760:CDS 35.0%
AATTGACAAAAACAGTGCTC+AGG - tig0012394:20918-20937 None:intergenic 35.0%
AGGATTACTCCTAGTAAACA+AGG + tig0012394:20958-20977 Msa1351760:CDS 35.0%
TTACTCCTAGTAAACAAGGT+TGG + tig0012394:20962-20981 Msa1351760:CDS 35.0%
! TGTAACCAACCTTGTTTACT+AGG - tig0012394:20970-20989 None:intergenic 35.0%
! AGTAAACAAGGTTGGTTACA+TGG + tig0012394:20970-20989 Msa1351760:CDS 35.0%
! GTAAACAAGGTTGGTTACAT+GGG + tig0012394:20971-20990 Msa1351760:CDS 35.0%
AGATTTGTACTTATAGCGTG+AGG - tig0012394:21085-21104 None:intergenic 35.0%
GAAATGCCTCTCAAAATGAT+TGG + tig0012394:21147-21166 Msa1351760:CDS 35.0%
TTGGTGGGACAAAACAAAAT+TGG + tig0012394:21166-21185 Msa1351760:CDS 35.0%
TGGTGGGACAAAACAAAATT+GGG + tig0012394:21167-21186 Msa1351760:CDS 35.0%
AAGTATTATTCCAAGGTGGT+AGG - tig0012394:21747-21766 None:intergenic 35.0%
ATAGTGTGTGATAAGTAGCA+TGG + tig0012394:17350-17369 Msa1351760:five_prime_UTR 35.0%
CTCAAAATTGTTTGCCTCTA+TGG - tig0012394:17393-17412 None:intergenic 35.0%
TATAATACAGGCAGATCAAG+AGG + tig0012394:17565-17584 Msa1351760:intron 35.0%
ACTGAATGGAAGAGAAAGAA+AGG + tig0012394:17611-17630 Msa1351760:CDS 35.0%
! TTGTCAGCATTGGACAATAT+GGG + tig0012394:17757-17776 Msa1351760:CDS 35.0%
ATTGGACAATATGGGATTTG+TGG + tig0012394:17765-17784 Msa1351760:CDS 35.0%
! CATGAAGTTTGTGAGAGTAT+TGG - tig0012394:17854-17873 None:intergenic 35.0%
CAATACTCTCACAAACTTCA+TGG + tig0012394:17852-17871 Msa1351760:CDS 35.0%
!! TTTTGGATCTCTAGAAGTTC+TGG + tig0012394:17951-17970 Msa1351760:intron 35.0%
CTTCTGATCAAATGTGTGTA+TGG - tig0012394:18006-18025 None:intergenic 35.0%
! ACACATTTGATCAGAAGTGT+TGG + tig0012394:18009-18028 Msa1351760:intron 35.0%
CATTTACATCCAAATGCATG+TGG + tig0012394:18142-18161 Msa1351760:CDS 35.0%
! AAATCAAGTTGTGTGAAAGG+TGG + tig0012394:18166-18185 Msa1351760:CDS 35.0%
TTACACATCACTGACATTGT+TGG + tig0012394:18204-18223 Msa1351760:CDS 35.0%
! CTTTTGCTTAGTTCAACACT+TGG + tig0012394:18334-18353 Msa1351760:CDS 35.0%
!! TGTACATACTTTAGTGGACT+TGG + tig0012394:18619-18638 Msa1351760:intron 35.0%
AAGCATGCAGTAACATAGTT+TGG - tig0012394:18822-18841 None:intergenic 35.0%
TTGACTACAGGTTATTGTTG+TGG + tig0012394:18962-18981 Msa1351760:intron 35.0%
ATGAATGAAGGAAGATTGGA+AGG - tig0012394:19098-19117 None:intergenic 35.0%
GAGTATGAATGAAGGAAGAT+TGG - tig0012394:19102-19121 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG - tig0012394:19886-19905 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG + tig0012394:19358-19377 Msa1351760:intron 35.0%
GTAGGTCAATTAAATTGGGA+CGG + tig0012394:19376-19395 Msa1351760:intron 35.0%
TACATAACATGCCTATTTGC+TGG - tig0012394:19465-19484 None:intergenic 35.0%
! TTTTCCATGTACATCGTAGT+AGG + tig0012394:19496-19515 Msa1351760:intron 35.0%
CAAAGTAGGTCAATTAAACC+GGG - tig0012394:19703-19722 None:intergenic 35.0%
CCAAAGTAGGTCAATTAAAC+CGG - tig0012394:19704-19723 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - tig0012394:19358-19377 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+TGG + tig0012394:19886-19905 Msa1351760:intron 35.0%
GAAAATGGGTCAGTTATTCT+GGG + tig0012394:19887-19906 Msa1351760:intron 35.0%
! AGTTTTCTGACATAACCAAG+AGG + tig0012394:19974-19993 Msa1351760:intron 35.0%
CCCTGAAAAATATGCAACTT+AGG + tig0012394:20052-20071 Msa1351760:intron 35.0%
! CCCTAAGTTGCATATTTTTC+AGG - tig0012394:20056-20075 None:intergenic 35.0%
AAAAAACGAAGCTACAAAGG+TGG - tig0012394:20091-20110 None:intergenic 35.0%
GATATATGAAGCTGCATAAG+TGG - tig0012394:20173-20192 None:intergenic 35.0%
ACATAATAAAACCCCAACCA+TGG + tig0012394:20344-20363 Msa1351760:CDS 35.0%
ATGATTGTGCTAGCTACTAT+TGG - tig0012394:20424-20443 None:intergenic 35.0%
CAAACATTCTCAGTACAACA+AGG + tig0012394:20469-20488 Msa1351760:CDS 35.0%
ATGAAAATAAGAGGGATGAC+AGG - tig0012394:20547-20566 None:intergenic 35.0%
TTATATCAATGACAGTGGCT+GGG + tig0012394:20683-20702 Msa1351760:CDS 35.0%
GGATAGTAGAAGTCAAAAGA+AGG + tig0012394:20704-20723 Msa1351760:CDS 35.0%
! TAGATGGGTCTTTTCTACTT+TGG - tig0012394:20732-20751 None:intergenic 35.0%
! ATAGGCTTATTGGGTTAGAT+GGG - tig0012394:20747-20766 None:intergenic 35.0%
! AATAGGCTTATTGGGTTAGA+TGG - tig0012394:20748-20767 None:intergenic 35.0%
! CTAACCCAATAAGCCTATTT+TGG + tig0012394:20749-20768 Msa1351760:CDS 35.0%
GAAAGCCAAAATAGGCTTAT+TGG - tig0012394:20757-20776 None:intergenic 35.0%
CATTGTCAACATCTTTCACA+TGG + tig0012394:20869-20888 Msa1351760:CDS 35.0%
AATTGACAAAAACAGTGCTC+AGG - tig0012394:20918-20937 None:intergenic 35.0%
AGGATTACTCCTAGTAAACA+AGG + tig0012394:20958-20977 Msa1351760:CDS 35.0%
TTACTCCTAGTAAACAAGGT+TGG + tig0012394:20962-20981 Msa1351760:CDS 35.0%
! TGTAACCAACCTTGTTTACT+AGG - tig0012394:20970-20989 None:intergenic 35.0%
! AGTAAACAAGGTTGGTTACA+TGG + tig0012394:20970-20989 Msa1351760:CDS 35.0%
! GTAAACAAGGTTGGTTACAT+GGG + tig0012394:20971-20990 Msa1351760:CDS 35.0%
AGATTTGTACTTATAGCGTG+AGG - tig0012394:21085-21104 None:intergenic 35.0%
GAAATGCCTCTCAAAATGAT+TGG + tig0012394:21147-21166 Msa1351760:CDS 35.0%
TTGGTGGGACAAAACAAAAT+TGG + tig0012394:21166-21185 Msa1351760:CDS 35.0%
TGGTGGGACAAAACAAAATT+GGG + tig0012394:21167-21186 Msa1351760:CDS 35.0%
AAGTATTATTCCAAGGTGGT+AGG - tig0012394:21747-21766 None:intergenic 35.0%
! AAGTGGGGTACCTATATGTT+TGG + tig0012394:17180-17199 Msa1351760:five_prime_UTR 40.0%
AACTCAAGCTTCTCACTGAA+TGG + tig0012394:17597-17616 Msa1351760:CDS 40.0%
GAATGGAAGAGAAAGAAAGG+TGG + tig0012394:17614-17633 Msa1351760:CDS 40.0%
! AGAGAAAGAAAGGTGGATTC+AGG + tig0012394:17621-17640 Msa1351760:CDS 40.0%
! GAGAAAGAAAGGTGGATTCA+GGG + tig0012394:17622-17641 Msa1351760:CDS 40.0%
TGATGTAGTGTTGTCAGCAT+TGG + tig0012394:17747-17766 Msa1351760:intron 40.0%
! GTTGTCAGCATTGGACAATA+TGG + tig0012394:17756-17775 Msa1351760:CDS 40.0%
TATGGGATTTGTGGCAAACA+TGG + tig0012394:17774-17793 Msa1351760:CDS 40.0%
ACTTTCTTGCTTTCCCTTGT+TGG + tig0012394:17880-17899 Msa1351760:CDS 40.0%
!! TTCACCACTTGCTTGCTTTT+TGG + tig0012394:17934-17953 Msa1351760:intron 40.0%
AGATCCAAAAAGCAAGCAAG+TGG - tig0012394:17941-17960 None:intergenic 40.0%
!! GATCAGAAGTGTTGGTGTTA+CGG + tig0012394:18017-18036 Msa1351760:intron 40.0%
! ACATTTGTAGGCTTTGGCAT+TGG + tig0012394:18096-18115 Msa1351760:intron 40.0%
CTTGATTTCCCACATGCATT+TGG - tig0012394:18154-18173 None:intergenic 40.0%
! GGGAAATCAAGTTGTGTGAA+AGG + tig0012394:18163-18182 Msa1351760:CDS 40.0%
AGTTGTGTGAAAGGTGGAAT+AGG + tig0012394:18172-18191 Msa1351760:CDS 40.0%
ATCACTGACATTGTTGGCAT+TGG + tig0012394:18210-18229 Msa1351760:CDS 40.0%
TCACTGACATTGTTGGCATT+GGG + tig0012394:18211-18230 Msa1351760:CDS 40.0%
! ACATTGTTGGCATTGGGAAT+AGG + tig0012394:18217-18236 Msa1351760:CDS 40.0%
AGAGGATCTATGACTGCATT+TGG + tig0012394:18247-18266 Msa1351760:CDS 40.0%
TCAACACTTGGAGCAATTAC+AGG + tig0012394:18346-18365 Msa1351760:CDS 40.0%
!! AGGTGTTACTGGTGTTGTTT+GGG + tig0012394:18366-18385 Msa1351760:CDS 40.0%
TACACAAAGAGCTTGGCATT+GGG + tig0012394:18393-18412 Msa1351760:CDS 40.0%
ACCTGAGCAATTCTGATTGT+GGG - tig0012394:18511-18530 None:intergenic 40.0%
TATAGTTCTTCGTGTGACTC+TGG - tig0012394:19014-19033 None:intergenic 40.0%
AAGTCACAAAGATGGAACAG+TGG + tig0012394:19040-19059 Msa1351760:CDS 40.0%
!!! ACGGAGGGAGTATTAGTTTT+TGG - tig0012394:19164-19183 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG - tig0012394:19187-19206 None:intergenic 40.0%
GTCAATTAAATTGGGACGGA+GGG + tig0012394:19380-19399 Msa1351760:intron 40.0%
CTTACCTACTACGATGTACA+TGG - tig0012394:19503-19522 None:intergenic 40.0%
CATGTACATCGTAGTAGGTA+AGG + tig0012394:19501-19520 Msa1351760:intron 40.0%
CCGGTTTAATTGACCTACTT+TGG + tig0012394:19701-19720 Msa1351760:intron 40.0%
!! ATGACAGGAATTGATGATGC+TGG - tig0012394:20532-20551 None:intergenic 40.0%
AGGAATCACACAACTCCAAA+GGG + tig0012394:20636-20655 Msa1351760:CDS 40.0%
GTTATATCAATGACAGTGGC+TGG + tig0012394:20682-20701 Msa1351760:CDS 40.0%
TGCTGATATGTTCACACTTG+TGG + tig0012394:20801-20820 Msa1351760:CDS 40.0%
GCTGATATGTTCACACTTGT+GGG + tig0012394:20802-20821 Msa1351760:CDS 40.0%
TAGCTAGGAACCAATAGAAC+AGG - tig0012394:21023-21042 None:intergenic 40.0%
ATGCCTCTCAAAATGATTGG+TGG + tig0012394:21150-21169 Msa1351760:CDS 40.0%
TGCCTCTCAAAATGATTGGT+GGG + tig0012394:21151-21170 Msa1351760:CDS 40.0%
GGGACAAAACAAAATTGGGA+AGG + tig0012394:21171-21190 Msa1351760:CDS 40.0%
CAAAATTGGGAAGGTAGCAT+TGG + tig0012394:21180-21199 Msa1351760:CDS 40.0%
!! AAGATTTTGGAAGCATAGGG+TGG + tig0012394:21221-21240 Msa1351760:exon 40.0%
ACAAGAATGGAATGGATCAG+TGG + tig0012394:21246-21265 Msa1351760:three_prime_UTR 40.0%
! GAATGGATCAGTGGATGTTT+TGG + tig0012394:21255-21274 Msa1351760:three_prime_UTR 40.0%
ACATACTAGTAGCAATCTCG+TGG - tig0012394:21304-21323 None:intergenic 40.0%
!! TGATTTGCTATTGTTGGCTC+TGG + tig0012394:21381-21400 Msa1351760:three_prime_UTR 40.0%
CACGTTCAAAAGAGATCAGA+AGG + tig0012394:21721-21740 Msa1351760:three_prime_UTR 40.0%
! AAGTGGGGTACCTATATGTT+TGG + tig0012394:17180-17199 Msa1351760:five_prime_UTR 40.0%
AACTCAAGCTTCTCACTGAA+TGG + tig0012394:17597-17616 Msa1351760:CDS 40.0%
GAATGGAAGAGAAAGAAAGG+TGG + tig0012394:17614-17633 Msa1351760:CDS 40.0%
! AGAGAAAGAAAGGTGGATTC+AGG + tig0012394:17621-17640 Msa1351760:CDS 40.0%
! GAGAAAGAAAGGTGGATTCA+GGG + tig0012394:17622-17641 Msa1351760:CDS 40.0%
TGATGTAGTGTTGTCAGCAT+TGG + tig0012394:17747-17766 Msa1351760:intron 40.0%
! GTTGTCAGCATTGGACAATA+TGG + tig0012394:17756-17775 Msa1351760:CDS 40.0%
TATGGGATTTGTGGCAAACA+TGG + tig0012394:17774-17793 Msa1351760:CDS 40.0%
ACTTTCTTGCTTTCCCTTGT+TGG + tig0012394:17880-17899 Msa1351760:CDS 40.0%
!! TTCACCACTTGCTTGCTTTT+TGG + tig0012394:17934-17953 Msa1351760:intron 40.0%
AGATCCAAAAAGCAAGCAAG+TGG - tig0012394:17941-17960 None:intergenic 40.0%
!! GATCAGAAGTGTTGGTGTTA+CGG + tig0012394:18017-18036 Msa1351760:intron 40.0%
! ACATTTGTAGGCTTTGGCAT+TGG + tig0012394:18096-18115 Msa1351760:intron 40.0%
CTTGATTTCCCACATGCATT+TGG - tig0012394:18154-18173 None:intergenic 40.0%
! GGGAAATCAAGTTGTGTGAA+AGG + tig0012394:18163-18182 Msa1351760:CDS 40.0%
AGTTGTGTGAAAGGTGGAAT+AGG + tig0012394:18172-18191 Msa1351760:CDS 40.0%
ATCACTGACATTGTTGGCAT+TGG + tig0012394:18210-18229 Msa1351760:CDS 40.0%
TCACTGACATTGTTGGCATT+GGG + tig0012394:18211-18230 Msa1351760:CDS 40.0%
! ACATTGTTGGCATTGGGAAT+AGG + tig0012394:18217-18236 Msa1351760:CDS 40.0%
AGAGGATCTATGACTGCATT+TGG + tig0012394:18247-18266 Msa1351760:CDS 40.0%
TCAACACTTGGAGCAATTAC+AGG + tig0012394:18346-18365 Msa1351760:CDS 40.0%
!! AGGTGTTACTGGTGTTGTTT+GGG + tig0012394:18366-18385 Msa1351760:CDS 40.0%
TACACAAAGAGCTTGGCATT+GGG + tig0012394:18393-18412 Msa1351760:CDS 40.0%
ACCTGAGCAATTCTGATTGT+GGG - tig0012394:18511-18530 None:intergenic 40.0%
TATAGTTCTTCGTGTGACTC+TGG - tig0012394:19014-19033 None:intergenic 40.0%
AAGTCACAAAGATGGAACAG+TGG + tig0012394:19040-19059 Msa1351760:CDS 40.0%
!!! ACGGAGGGAGTATTAGTTTT+TGG - tig0012394:19164-19183 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG - tig0012394:19187-19206 None:intergenic 40.0%
GTCAATTAAATTGGGACGGA+GGG + tig0012394:19380-19399 Msa1351760:intron 40.0%
CTTACCTACTACGATGTACA+TGG - tig0012394:19503-19522 None:intergenic 40.0%
CATGTACATCGTAGTAGGTA+AGG + tig0012394:19501-19520 Msa1351760:intron 40.0%
CCGGTTTAATTGACCTACTT+TGG + tig0012394:19701-19720 Msa1351760:intron 40.0%
!! ATGACAGGAATTGATGATGC+TGG - tig0012394:20532-20551 None:intergenic 40.0%
AGGAATCACACAACTCCAAA+GGG + tig0012394:20636-20655 Msa1351760:CDS 40.0%
GTTATATCAATGACAGTGGC+TGG + tig0012394:20682-20701 Msa1351760:CDS 40.0%
TGCTGATATGTTCACACTTG+TGG + tig0012394:20801-20820 Msa1351760:CDS 40.0%
GCTGATATGTTCACACTTGT+GGG + tig0012394:20802-20821 Msa1351760:CDS 40.0%
TAGCTAGGAACCAATAGAAC+AGG - tig0012394:21023-21042 None:intergenic 40.0%
ATGCCTCTCAAAATGATTGG+TGG + tig0012394:21150-21169 Msa1351760:CDS 40.0%
TGCCTCTCAAAATGATTGGT+GGG + tig0012394:21151-21170 Msa1351760:CDS 40.0%
GGGACAAAACAAAATTGGGA+AGG + tig0012394:21171-21190 Msa1351760:CDS 40.0%
CAAAATTGGGAAGGTAGCAT+TGG + tig0012394:21180-21199 Msa1351760:CDS 40.0%
!! AAGATTTTGGAAGCATAGGG+TGG + tig0012394:21221-21240 Msa1351760:exon 40.0%
ACAAGAATGGAATGGATCAG+TGG + tig0012394:21246-21265 Msa1351760:three_prime_UTR 40.0%
! GAATGGATCAGTGGATGTTT+TGG + tig0012394:21255-21274 Msa1351760:three_prime_UTR 40.0%
ACATACTAGTAGCAATCTCG+TGG - tig0012394:21304-21323 None:intergenic 40.0%
!! TGATTTGCTATTGTTGGCTC+TGG + tig0012394:21381-21400 Msa1351760:three_prime_UTR 40.0%
CACGTTCAAAAGAGATCAGA+AGG + tig0012394:21721-21740 Msa1351760:three_prime_UTR 40.0%
GTGTGATAAGTAGCATGGAG+AGG + tig0012394:17355-17374 Msa1351760:five_prime_UTR 45.0%
GGACAAGTAGTGAACCATAG+AGG + tig0012394:17376-17395 Msa1351760:five_prime_UTR 45.0%
!! GTGAGAGTATTGGCAGAACT+TGG - tig0012394:17844-17863 None:intergenic 45.0%
TTCTTGCTTTCCCTTGTTGG+TGG + tig0012394:17883-17902 Msa1351760:intron 45.0%
TGAGATGAAGCCACCAACAA+GGG - tig0012394:17896-17915 None:intergenic 45.0%
! TTGTTGGCATTGGGAATAGG+AGG + tig0012394:18220-18239 Msa1351760:CDS 45.0%
! TGTTGGCATTGGGAATAGGA+GGG + tig0012394:18221-18240 Msa1351760:CDS 45.0%
! GCAAGTGCTTTTGCCTCATT+TGG - tig0012394:18298-18317 None:intergenic 45.0%
! GGAGCAATTACAGGTGTTAC+TGG + tig0012394:18355-18374 Msa1351760:CDS 45.0%
!! CAGGTGTTACTGGTGTTGTT+TGG + tig0012394:18365-18384 Msa1351760:CDS 45.0%
! GGGTTAGTACACAAAGAGCT+TGG + tig0012394:18386-18405 Msa1351760:CDS 45.0%
GTACACAAAGAGCTTGGCAT+TGG + tig0012394:18392-18411 Msa1351760:CDS 45.0%
ACACAAAGAGCTTGGCATTG+GGG + tig0012394:18394-18413 Msa1351760:CDS 45.0%
CCTGAGCAATTCTGATTGTG+GGG - tig0012394:18510-18529 None:intergenic 45.0%
GACCTGAGCAATTCTGATTG+TGG - tig0012394:18512-18531 None:intergenic 45.0%
GGTCAATTAAATTGGGACGG+AGG + tig0012394:19379-19398 Msa1351760:intron 45.0%
GAAAAATACTACCTCCGTCC+CGG + tig0012394:19682-19701 Msa1351760:intron 45.0%
GTAGGTCAATTAAACCGGGA+CGG - tig0012394:19699-19718 None:intergenic 45.0%
! ATGGGTCAGTTATTCTGGGA+CGG + tig0012394:19891-19910 Msa1351760:intron 45.0%
TGTGCACACTTTCCATGGTT+GGG - tig0012394:20359-20378 None:intergenic 45.0%
AAAATCACCAACCACCCTTC+AGG + tig0012394:20616-20635 Msa1351760:CDS 45.0%
GGAGTTGTGTGATTCCTGAA+GGG - tig0012394:20633-20652 None:intergenic 45.0%
TGGAGTTGTGTGATTCCTGA+AGG - tig0012394:20634-20653 None:intergenic 45.0%
CAGGAATCACACAACTCCAA+AGG + tig0012394:20635-20654 Msa1351760:CDS 45.0%
ATCACACAACTCCAAAGGGT+AGG + tig0012394:20640-20659 Msa1351760:CDS 45.0%
CTAATCCAACACCTACCCTT+TGG - tig0012394:20654-20673 None:intergenic 45.0%
TATAGCGTGAGGCCCAATAA+AGG - tig0012394:21074-21093 None:intergenic 45.0%
! GTCCCACCAATCATTTTGAG+AGG - tig0012394:21156-21175 None:intergenic 45.0%
! AATTGGGAAGGTAGCATTGG+TGG + tig0012394:21183-21202 Msa1351760:CDS 45.0%
GTGTGATAAGTAGCATGGAG+AGG + tig0012394:17355-17374 Msa1351760:five_prime_UTR 45.0%
GGACAAGTAGTGAACCATAG+AGG + tig0012394:17376-17395 Msa1351760:five_prime_UTR 45.0%
!! GTGAGAGTATTGGCAGAACT+TGG - tig0012394:17844-17863 None:intergenic 45.0%
TTCTTGCTTTCCCTTGTTGG+TGG + tig0012394:17883-17902 Msa1351760:intron 45.0%
TGAGATGAAGCCACCAACAA+GGG - tig0012394:17896-17915 None:intergenic 45.0%
! TTGTTGGCATTGGGAATAGG+AGG + tig0012394:18220-18239 Msa1351760:CDS 45.0%
! TGTTGGCATTGGGAATAGGA+GGG + tig0012394:18221-18240 Msa1351760:CDS 45.0%
! GCAAGTGCTTTTGCCTCATT+TGG - tig0012394:18298-18317 None:intergenic 45.0%
! GGAGCAATTACAGGTGTTAC+TGG + tig0012394:18355-18374 Msa1351760:CDS 45.0%
!! CAGGTGTTACTGGTGTTGTT+TGG + tig0012394:18365-18384 Msa1351760:CDS 45.0%
! GGGTTAGTACACAAAGAGCT+TGG + tig0012394:18386-18405 Msa1351760:CDS 45.0%
GTACACAAAGAGCTTGGCAT+TGG + tig0012394:18392-18411 Msa1351760:CDS 45.0%
ACACAAAGAGCTTGGCATTG+GGG + tig0012394:18394-18413 Msa1351760:CDS 45.0%
CCTGAGCAATTCTGATTGTG+GGG - tig0012394:18510-18529 None:intergenic 45.0%
GACCTGAGCAATTCTGATTG+TGG - tig0012394:18512-18531 None:intergenic 45.0%
GGTCAATTAAATTGGGACGG+AGG + tig0012394:19379-19398 Msa1351760:intron 45.0%
GAAAAATACTACCTCCGTCC+CGG + tig0012394:19682-19701 Msa1351760:intron 45.0%
GTAGGTCAATTAAACCGGGA+CGG - tig0012394:19699-19718 None:intergenic 45.0%
! ATGGGTCAGTTATTCTGGGA+CGG + tig0012394:19891-19910 Msa1351760:intron 45.0%
TGTGCACACTTTCCATGGTT+GGG - tig0012394:20359-20378 None:intergenic 45.0%
AAAATCACCAACCACCCTTC+AGG + tig0012394:20616-20635 Msa1351760:CDS 45.0%
GGAGTTGTGTGATTCCTGAA+GGG - tig0012394:20633-20652 None:intergenic 45.0%
TGGAGTTGTGTGATTCCTGA+AGG - tig0012394:20634-20653 None:intergenic 45.0%
CAGGAATCACACAACTCCAA+AGG + tig0012394:20635-20654 Msa1351760:CDS 45.0%
ATCACACAACTCCAAAGGGT+AGG + tig0012394:20640-20659 Msa1351760:CDS 45.0%
CTAATCCAACACCTACCCTT+TGG - tig0012394:20654-20673 None:intergenic 45.0%
TATAGCGTGAGGCCCAATAA+AGG - tig0012394:21074-21093 None:intergenic 45.0%
! GTCCCACCAATCATTTTGAG+AGG - tig0012394:21156-21175 None:intergenic 45.0%
! AATTGGGAAGGTAGCATTGG+TGG + tig0012394:21183-21202 Msa1351760:CDS 45.0%
CTGAGATGAAGCCACCAACA+AGG - tig0012394:17897-17916 None:intergenic 50.0%
! GTTGGCATTGGGAATAGGAG+GGG + tig0012394:18222-18241 Msa1351760:CDS 50.0%
TTGGGAATAGGAGGGGTAAG+AGG + tig0012394:18229-18248 Msa1351760:CDS 50.0%
! GGCTTTGTCACACTTGCTCT+TGG + tig0012394:18448-18467 Msa1351760:CDS 50.0%
CCCCACAATCAGAATTGCTC+AGG + tig0012394:18507-18526 Msa1351760:CDS 50.0%
ACTCTGGCAGTGACAGCTTT+CGG - tig0012394:18998-19017 None:intergenic 50.0%
AACTAATACTCCCTCCGTCC+CGG + tig0012394:19166-19185 Msa1351760:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - tig0012394:19183-19202 None:intergenic 50.0%
CATCGTAGTAGGTAAGGCCA+AGG + tig0012394:19507-19526 Msa1351760:intron 50.0%
!! GTCAGTTATTCTGGGACGGA+GGG + tig0012394:19895-19914 Msa1351760:intron 50.0%
GTGCACACTTTCCATGGTTG+GGG - tig0012394:20358-20377 None:intergenic 50.0%
CTGTGCACACTTTCCATGGT+TGG - tig0012394:20360-20379 None:intergenic 50.0%
GTCACTGTGCACACTTTCCA+TGG - tig0012394:20364-20383 None:intergenic 50.0%
TGTGATTCCTGAAGGGTGGT+TGG - tig0012394:20626-20645 None:intergenic 50.0%
GTTGTGTGATTCCTGAAGGG+TGG - tig0012394:20630-20649 None:intergenic 50.0%
CAACTCCAAAGGGTAGGTGT+TGG + tig0012394:20646-20665 Msa1351760:CDS 50.0%
GTTCACACTTGTGGGACTCT+TGG + tig0012394:20810-20829 Msa1351760:CDS 50.0%
GCATAGGGTGGAGACAAGAA+TGG + tig0012394:21233-21252 Msa1351760:three_prime_UTR 50.0%
GGGTGGAGACAAGAATGGAA+TGG + tig0012394:21238-21257 Msa1351760:three_prime_UTR 50.0%
CTGAGATGAAGCCACCAACA+AGG - tig0012394:17897-17916 None:intergenic 50.0%
! GTTGGCATTGGGAATAGGAG+GGG + tig0012394:18222-18241 Msa1351760:CDS 50.0%
TTGGGAATAGGAGGGGTAAG+AGG + tig0012394:18229-18248 Msa1351760:CDS 50.0%
! GGCTTTGTCACACTTGCTCT+TGG + tig0012394:18448-18467 Msa1351760:CDS 50.0%
CCCCACAATCAGAATTGCTC+AGG + tig0012394:18507-18526 Msa1351760:CDS 50.0%
ACTCTGGCAGTGACAGCTTT+CGG - tig0012394:18998-19017 None:intergenic 50.0%
AACTAATACTCCCTCCGTCC+CGG + tig0012394:19166-19185 Msa1351760:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - tig0012394:19183-19202 None:intergenic 50.0%
CATCGTAGTAGGTAAGGCCA+AGG + tig0012394:19507-19526 Msa1351760:intron 50.0%
!! GTCAGTTATTCTGGGACGGA+GGG + tig0012394:19895-19914 Msa1351760:intron 50.0%
GTGCACACTTTCCATGGTTG+GGG - tig0012394:20358-20377 None:intergenic 50.0%
CTGTGCACACTTTCCATGGT+TGG - tig0012394:20360-20379 None:intergenic 50.0%
GTCACTGTGCACACTTTCCA+TGG - tig0012394:20364-20383 None:intergenic 50.0%
TGTGATTCCTGAAGGGTGGT+TGG - tig0012394:20626-20645 None:intergenic 50.0%
GTTGTGTGATTCCTGAAGGG+TGG - tig0012394:20630-20649 None:intergenic 50.0%
CAACTCCAAAGGGTAGGTGT+TGG + tig0012394:20646-20665 Msa1351760:CDS 50.0%
GTTCACACTTGTGGGACTCT+TGG + tig0012394:20810-20829 Msa1351760:CDS 50.0%
GCATAGGGTGGAGACAAGAA+TGG + tig0012394:21233-21252 Msa1351760:three_prime_UTR 50.0%
GGGTGGAGACAAGAATGGAA+TGG + tig0012394:21238-21257 Msa1351760:three_prime_UTR 50.0%
CTGATTGTGGGGCTATCTGC+TGG - tig0012394:18499-18518 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG - tig0012394:19179-19198 None:intergenic 55.0%
GTAGGTAAGGCCAAGGACAC+TGG + tig0012394:19514-19533 Msa1351760:intron 55.0%
!! AGTAGTGGGTCCAGTGTCCT+TGG - tig0012394:19527-19546 None:intergenic 55.0%
GGTCAATTAAACCGGGACGG+AGG - tig0012394:19696-19715 None:intergenic 55.0%
!! GGTCAGTTATTCTGGGACGG+AGG + tig0012394:19894-19913 Msa1351760:intron 55.0%
GATCAGAAGGCCTACCACCT+TGG + tig0012394:21734-21753 Msa1351760:three_prime_UTR 55.0%
CTGATTGTGGGGCTATCTGC+TGG - tig0012394:18499-18518 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG - tig0012394:19179-19198 None:intergenic 55.0%
GTAGGTAAGGCCAAGGACAC+TGG + tig0012394:19514-19533 Msa1351760:intron 55.0%
!! AGTAGTGGGTCCAGTGTCCT+TGG - tig0012394:19527-19546 None:intergenic 55.0%
GGTCAATTAAACCGGGACGG+AGG - tig0012394:19696-19715 None:intergenic 55.0%
!! GGTCAGTTATTCTGGGACGG+AGG + tig0012394:19894-19913 Msa1351760:intron 55.0%
GATCAGAAGGCCTACCACCT+TGG + tig0012394:21734-21753 Msa1351760:three_prime_UTR 55.0%
GGTCAGTTATTCCGGGACGG+AGG - tig0012394:19180-19199 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG - tig0012394:19180-19199 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0012394 gene 17177 21855 17177 ID=Msa1351760;Name=Msa1351760
tig0012394 mRNA 17177 21855 17177 ID=Msa1351760-mRNA-1;Parent=Msa1351760;Name=Msa1351760-mRNA-1;_AED=0.06;_eAED=0.06;_QI=310|0.8|0.66|1|1|1|6|634|554
tig0012394 exon 17177 17489 17177 ID=Msa1351760-mRNA-1:exon:7856;Parent=Msa1351760-mRNA-1
tig0012394 exon 17575 17662 17575 ID=Msa1351760-mRNA-1:exon:7857;Parent=Msa1351760-mRNA-1
tig0012394 exon 17755 17901 17755 ID=Msa1351760-mRNA-1:exon:7858;Parent=Msa1351760-mRNA-1
tig0012394 exon 18131 18528 18131 ID=Msa1351760-mRNA-1:exon:7859;Parent=Msa1351760-mRNA-1
tig0012394 exon 18972 19090 18972 ID=Msa1351760-mRNA-1:exon:7860;Parent=Msa1351760-mRNA-1
tig0012394 exon 20312 21855 20312 ID=Msa1351760-mRNA-1:exon:7861;Parent=Msa1351760-mRNA-1
tig0012394 five_prime_UTR 17177 17486 17177 ID=Msa1351760-mRNA-1:five_prime_utr;Parent=Msa1351760-mRNA-1
tig0012394 CDS 17487 17489 17487 ID=Msa1351760-mRNA-1:cds;Parent=Msa1351760-mRNA-1
tig0012394 CDS 17575 17662 17575 ID=Msa1351760-mRNA-1:cds;Parent=Msa1351760-mRNA-1
tig0012394 CDS 17755 17901 17755 ID=Msa1351760-mRNA-1:cds;Parent=Msa1351760-mRNA-1
tig0012394 CDS 18131 18528 18131 ID=Msa1351760-mRNA-1:cds;Parent=Msa1351760-mRNA-1
tig0012394 CDS 18972 19090 18972 ID=Msa1351760-mRNA-1:cds;Parent=Msa1351760-mRNA-1
tig0012394 CDS 20312 21221 20312 ID=Msa1351760-mRNA-1:cds;Parent=Msa1351760-mRNA-1
tig0012394 three_prime_UTR 21222 21855 21222 ID=Msa1351760-mRNA-1:three_prime_utr;Parent=Msa1351760-mRNA-1
Gene Sequence

>Msa1351760

ATGGCAGATCAAGAGGAAACTGAAGAACTCAAGCTTCTCACTGAATGGAAGAGAAAGAAAGGTGGATTCAGGGCTTCTATGTTTATTTTTGTGTTGTCAGCATTGGACAATATGGGATTTGTGGCAAACATGGTTAGCTTAGTTTTATATTTTTATGGAGTGATGCACTTTGATCTACCAAGTTCTGCCAATACTCTCACAAACTTCATGGGATCAACTTTCTTGCTTTCCCTTGTTGCTGCTTCAGATCATTTACATCCAAATGCATGTGGGAAATCAAGTTGTGTGAAAGGTGGAATAGGATTCATGTTTTACACATCACTGACATTGTTGGCATTGGGAATAGGAGGGGTAAGAGGATCTATGACTGCATTTGGTGCTGACCAATTTGAAGAAAAAGATCCAAATGAGGCAAAAGCACTTGCAAGTTTTTTCAATTGGCTTTTGCTTAGTTCAACACTTGGAGCAATTACAGGTGTTACTGGTGTTGTTTGGGTTAGTACACAAAGAGCTTGGCATTGGGGATTTTTCATAATAACTATAGCTTCTTCTATTGGCTTTGTCACACTTGCTCTTGGTAAGCCTTTCTATAGAATCAAAACTCCAGCAGATAGCCCCACAATCAGAATTGCTCAGGTTATTGTTGTGGCATTTAAAAACCGAAAGCTGTCACTGCCAGAGTCACACGAAGAACTATATGAAATAAGTCACAAAGATGGAACAGTGGAGAAAATAGTTCACACAAAACAAATGAGGTTTCTAGATAAAGCAGCAATTCCCCAAGAATACATAATAAAACCCCAACCATGGAAAGTGTGCACAGTGACACAAGTTGAAGAAGTGAAAATCCTAACAAGAATGTTACCAATAGTAGCTAGCACAATCATAATGAACACTTGTTTAGCACAGCTTCAAACATTCTCAGTACAACAAGGGAATGTAATGAACCTTAAACTTGGTTCATTTACTGTTCCAGCATCATCAATTCCTGTCATCCCTCTTATTTTCATAAGCATTTTGATTCCAATTTATGAACTTTTCTTTGTTCCATTTGCAAGAAAAATCACCAACCACCCTTCAGGAATCACACAACTCCAAAGGGTAGGTGTTGGATTAGTACTATCAGTTATATCAATGACAGTGGCTGGGATAGTAGAAGTCAAAAGAAGGGACCAAAGTAGAAAAGACCCATCTAACCCAATAAGCCTATTTTGGCTTTCATTCCAATATGGCATTTTTGGTATTGCTGATATGTTCACACTTGTGGGACTCTTGGAATTTTTTTATAGGGAATCACCTTCAAGTATGAAATCATTGTCAACATCTTTCACATGGTTATCAATGTCTATTGGTTACTTCCTGAGCACTGTTTTTGTCAATTTGATTAATGTTGTTACCAAAAGGATTACTCCTAGTAAACAAGGTTGGTTACATGGGTTTGATTTGAATCAAAGTAATTTGAACCTGTTCTATTGGTTCCTAGCTATACTTAGTTGTCTTAATTTTTTCAACTACCTTTATTGGGCCTCACGCTATAAGTACAAATCTGAAGACCAAAATTCAAGCCCAATAGATTTGAAGAGTTTGCATGAAATGCCTCTCAAAATGATTGGTGGGACAAAACAAAATTGGGAAGGTAGCATTGGTGGACATACACAAGATTGA
Protein sequence

>Msa1351760

MADQEETEELKLLTEWKRKKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDLPSSANTLTNFMGSTFLLSLVAASDHLHPNACGKSSCVKGGIGFMFYTSLTLLALGIGGVRGSMTAFGADQFEEKDPNEAKALASFFNWLLLSSTLGAITGVTGVVWVSTQRAWHWGFFIITIASSIGFVTLALGKPFYRIKTPADSPTIRIAQVIVVAFKNRKLSLPESHEELYEISHKDGTVEKIVHTKQMRFLDKAAIPQEYIIKPQPWKVCTVTQVEEVKILTRMLPIVASTIIMNTCLAQLQTFSVQQGNVMNLKLGSFTVPASSIPVIPLIFISILIPIYELFFVPFARKITNHPSGITQLQRVGVGLVLSVISMTVAGIVEVKRRDQSRKDPSNPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPSSMKSLSTSFTWLSMSIGYFLSTVFVNLINVVTKRITPSKQGWLHGFDLNQSNLNLFYWFLAILSCLNFFNYLYWASRYKYKSEDQNSSPIDLKSLHEMPLKMIGGTKQNWEGSIGGHTQD*