AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1084320


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1084320 MtrunA17_Chr7g0250221 88.846 260 28 1 1 259 1 260 3.48e-118 356
Msa1084320 MtrunA17_Chr8g0335981 48.276 290 110 7 1 259 1 281 2.57e-51 179
Msa1084320 MtrunA17_Chr8g0372111 51.429 70 34 0 190 259 415 484 6.17e-19 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1084320 AT2G44710.2 58.163 98 41 0 162 259 183 280 1.39e-27 112
Msa1084320 AT2G44710.1 58.163 98 41 0 162 259 183 280 1.39e-27 112
Msa1084320 AT2G44710.4 58.163 98 41 0 162 259 98 195 1.73e-27 112

Find 248 sgRNAs with CRISPR-Local

Find 418 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATTTCAATTCAATATTAT+TGG 0.131999 7_2:-84602765 Msa1084320:five_prime_UTR
TGACTACAATTTCAGATTAA+TGG 0.152218 7_2:-84600981 Msa1084320:three_prime_UTR
TTGAATTGAAATTATAAAAT+TGG 0.178896 7_2:+84602774 None:intergenic
TTTAATAAGAGAGAGAAATT+TGG 0.195069 7_2:+84602816 None:intergenic
CATGATTATCTTCATGATTC+TGG 0.204003 7_2:+84602541 None:intergenic
CGAGCTCTTCTTAAGAAATA+TGG 0.216036 7_2:-84599637 Msa1084320:three_prime_UTR
AGTAGAGTTTCTACAGATTA+TGG 0.227585 7_2:-84598943 Msa1084320:three_prime_UTR
GAAAATAAGGTCCATGGATT+TGG 0.230006 7_2:-84597521 Msa1084320:three_prime_UTR
CTCTTATTAAATTCAGAATT+AGG 0.252282 7_2:-84602804 Msa1084320:five_prime_UTR
AAGGAGAAATTGAAACATTA+TGG 0.254237 7_2:-84600751 Msa1084320:three_prime_UTR
TGTCTTCTGCAATCGCTTAT+AGG 0.267797 7_2:+84600621 None:intergenic
CGCGATTATGACACACTATC+TGG 0.278511 7_2:-84598730 Msa1084320:three_prime_UTR
TTAATAAGAGAGAGAAATTT+GGG 0.278903 7_2:+84602817 None:intergenic
CACCATAAGCCTCTCTATAT+CGG 0.288642 7_2:+84598503 None:intergenic
TGCTGAGTTATAGACTGATT+TGG 0.315723 7_2:-84597720 Msa1084320:three_prime_UTR
AGCTCCTGGCTCTGTTCATT+TGG 0.317727 7_2:-84597547 Msa1084320:three_prime_UTR
TGACCTGGGTGATGATATTA+TGG 0.320374 7_2:-84600542 Msa1084320:three_prime_UTR
CCGCTTTCGGAGGCATGGTT+TGG 0.321637 7_2:+84602652 None:intergenic
CGTTGAATCCTCAGACTAAA+AGG 0.324292 7_2:-84601150 Msa1084320:CDS
TCGTCATCCACATTCTCTTC+AGG 0.324779 7_2:+84601457 None:intergenic
TACTTCAATCCAAGATATCT+TGG 0.325649 7_2:-84597676 Msa1084320:three_prime_UTR
GTTCATTTGGAAAGAAAATA+AGG 0.328933 7_2:-84597534 Msa1084320:three_prime_UTR
TTCTGGATAGGTTCAGGTTC+AGG 0.331908 7_2:+84602558 None:intergenic
GCTCTCTTGGTGGTAGTGAT+GGG 0.337411 7_2:-84598194 Msa1084320:three_prime_UTR
GCTTCTTTCAGGCAAAAGTT+AGG 0.339127 7_2:-84599399 Msa1084320:intron
TGCACCAAGGAGGGGTTATC+TGG 0.341073 7_2:-84598827 Msa1084320:three_prime_UTR
GGCTCTCTTGGTGGTAGTGA+TGG 0.343398 7_2:-84598195 Msa1084320:three_prime_UTR
GGTTAATTCTAAATGTAAAA+AGG 0.344009 7_2:-84597615 Msa1084320:three_prime_UTR
CAACACAAGAAAGTGTTATT+CGG 0.345689 7_2:+84602687 None:intergenic
TTGATTTACTGCCTCCTTCA+TGG 0.354240 7_2:-84599675 Msa1084320:three_prime_UTR
TCTGTAGAAACTCTACTTCT+TGG 0.355207 7_2:+84598949 None:intergenic
CATTTGCAAGACATGGAAAA+AGG 0.359691 7_2:-84600904 Msa1084320:three_prime_UTR
CAATTCAATATTATTGGATT+CGG 0.368607 7_2:-84602759 Msa1084320:five_prime_UTR
GAGGCTGGCCTAGCTCTTAC+AGG 0.370811 7_2:+84599148 None:intergenic
TCTCGTTTAGACTATGACTA+TGG 0.372013 7_2:-84598538 Msa1084320:three_prime_UTR
AATTATGGATTTGTTACGTT+TGG 0.373518 7_2:-84599562 Msa1084320:three_prime_UTR
TCATGATTCTGGATAGGTTC+AGG 0.375138 7_2:+84602552 None:intergenic
CTCTCACTAGAAGGTCTAAC+TGG 0.376141 7_2:+84599196 None:intergenic
CGAATAACACTTTCTTGTGT+TGG 0.376301 7_2:-84602686 Msa1084320:five_prime_UTR
ATCATCACCCAGGTCAATAA+AGG 0.378170 7_2:+84600549 None:intergenic
GGTGCTCGCAGGAAGAATTA+TGG 0.380990 7_2:-84599577 Msa1084320:three_prime_UTR
TAGCCGCAAGATTGGAAGAT+TGG 0.381965 7_2:-84599314 Msa1084320:three_prime_UTR
GACATTTCTAGCCGCAAGAT+TGG 0.387515 7_2:-84599322 Msa1084320:three_prime_UTR
AAGGAATTGGAAGTATTTGT+TGG 0.389201 7_2:-84601253 Msa1084320:CDS
TGCAAACTCCTTTATTGACC+TGG 0.389228 7_2:-84600557 Msa1084320:three_prime_UTR
ATTCGTCCATGTATTCTAGT+AGG 0.390078 7_2:-84598012 Msa1084320:three_prime_UTR
GACGTATCCCTATGCAGGTC+AGG 0.397751 7_2:+84598856 None:intergenic
AGTAGCACGAAGAGAGATTA+TGG 0.398209 7_2:-84598994 Msa1084320:three_prime_UTR
AGACAATGTAGAGGAGGTTA+AGG 0.405956 7_2:-84601632 Msa1084320:CDS
TCTTCAAAATGACGGGCATC+AGG 0.414427 7_2:+84597752 None:intergenic
CGTCTATTTCTCTCACTAGA+AGG 0.416231 7_2:+84599187 None:intergenic
AGGAATTGGAAGTATTTGTT+GGG 0.417287 7_2:-84601252 Msa1084320:CDS
TTGAAGTTATTCAATTTATG+AGG 0.418486 7_2:-84597636 Msa1084320:three_prime_UTR
GAGCTCTTCTTAAGAAATAT+GGG 0.418982 7_2:-84599636 Msa1084320:three_prime_UTR
GAATAACACTTTCTTGTGTT+GGG 0.419405 7_2:-84602685 Msa1084320:five_prime_UTR
AGGCTTGAAAGATCTAGTTT+AGG 0.420838 7_2:-84598390 Msa1084320:three_prime_UTR
AGAGAAGATCCAAGATATCT+TGG 0.421729 7_2:+84597667 None:intergenic
ATTCAACGTCGTCCTGGCTT+CGG 0.425982 7_2:+84601165 None:intergenic
TGTTGTGTATCAGGCTCTCT+TGG 0.432447 7_2:-84598207 Msa1084320:intron
CTTTCCAAATGAACAGAGCC+AGG 0.433942 7_2:+84597543 None:intergenic
TCCACCAGAGCTACACCATT+AGG 0.440344 7_2:+84602477 None:intergenic
ACATGTTTACCACGAACTTT+CGG 0.441103 7_2:+84599355 None:intergenic
TTCTACAGATTATGGCTCTC+AGG 0.441928 7_2:-84598935 Msa1084320:three_prime_UTR
CTGCTGGTGGTTTAGGTTGG+TGG 0.442382 7_2:-84598043 Msa1084320:intron
AACGCAGAAGCAGAAGGAAT+TGG 0.443107 7_2:-84601266 Msa1084320:CDS
GATCTAGCTGGAGGAGAGGC+TGG 0.447370 7_2:+84599133 None:intergenic
CTTCTTTCAGGCAAAAGTTA+GGG 0.447493 7_2:-84599398 Msa1084320:intron
AATTGAACAAGACGAGGGTC+AGG 0.452315 7_2:-84601506 Msa1084320:CDS
TGATTTACTGCCTCCTTCAT+GGG 0.453875 7_2:-84599674 Msa1084320:three_prime_UTR
GGAGAACGTGCATGAGCATC+TGG 0.454735 7_2:-84601329 Msa1084320:CDS
GTTAGGTGAAGGCAACAAAA+AGG 0.457290 7_2:-84599491 Msa1084320:intron
TTGAAGTAATCCTTGAATAG+TGG 0.463920 7_2:+84597691 None:intergenic
GATTATCCAGCCCGTGACTC+TGG 0.465141 7_2:-84598883 Msa1084320:three_prime_UTR
GCTCATGTGTTCAGAAGACT+TGG 0.466194 7_2:-84599232 Msa1084320:three_prime_UTR
TTTCACCGCTTTCGGAGGCA+TGG 0.469047 7_2:+84602647 None:intergenic
AGATCCTACAGGAGATTAGC+AGG 0.472819 7_2:-84599115 Msa1084320:intron
TTCGTCCATGTATTCTAGTA+GGG 0.474534 7_2:-84598011 Msa1084320:three_prime_UTR
CTCTCTTGGTGGTAGTGATG+GGG 0.474594 7_2:-84598193 Msa1084320:three_prime_UTR
AGTCTAAACGAGATCTTGAT+TGG 0.475930 7_2:+84598548 None:intergenic
TTATGGAGTTGAAAGTTTCA+AGG 0.477289 7_2:-84600734 Msa1084320:three_prime_UTR
TCCCGATATAGAGAGGCTTA+TGG 0.477978 7_2:-84598505 Msa1084320:three_prime_UTR
CTCATGCACGTTCTCCTCAC+TGG 0.478824 7_2:+84601336 None:intergenic
ACCATAAGCCTCTCTATATC+GGG 0.480367 7_2:+84598504 None:intergenic
CTTAGACGGGGAGGTGGAGA+AGG 0.484673 7_2:+84598772 None:intergenic
TAATTCTTCCTGCGAGCACC+TGG 0.485879 7_2:+84599580 None:intergenic
TATATGAGTGGTAGCGGTGG+TGG 0.486870 7_2:-84597968 Msa1084320:three_prime_UTR
GCTCTGTAGCATCCTTGTCT+AGG 0.487388 7_2:+84601227 None:intergenic
ATAGAGAGGCTTATGGTGAT+AGG 0.489079 7_2:-84598498 Msa1084320:intron
TTGCTGTTGATTCTGAGTTG+TGG 0.490523 7_2:+84602584 None:intergenic
GACTATGACTATGGAGGCAG+TGG 0.491996 7_2:-84598529 Msa1084320:three_prime_UTR
GGCATCTACTCATCAAGTTA+TGG 0.493108 7_2:-84598171 Msa1084320:three_prime_UTR
CGATAACTTAGACGGGGAGG+TGG 0.500123 7_2:+84598766 None:intergenic
GCAGGTCGACTCTGTGGTGC+AGG 0.502241 7_2:+84599253 None:intergenic
CTTGGAGGTGGCAGATCCAC+AGG 0.502795 7_2:+84598967 None:intergenic
GGATCTAGATCTTATTATTG+AGG 0.505400 7_2:-84597947 Msa1084320:intron
ATGTGGTATCACCACATGTC+AGG 0.506024 7_2:-84600952 Msa1084320:three_prime_UTR
AGTCGACAGGAACCGAGTTA+TGG 0.506806 7_2:-84598312 Msa1084320:three_prime_UTR
AGATAGTGTGTCATAATCGC+GGG 0.507246 7_2:+84598732 None:intergenic
GGTAATCTTTGATCTTCTCA+TGG 0.507315 7_2:-84601050 Msa1084320:CDS
TTCGTCTCGTTCAGATGCTA+AGG 0.507456 7_2:-84600647 Msa1084320:three_prime_UTR
CTGGCTACCCTGACCTGCAT+AGG 0.509292 7_2:-84598864 Msa1084320:three_prime_UTR
CTGAGGATTCAACGTCGTCC+TGG 0.509458 7_2:+84601159 None:intergenic
GGTGATGATGATGATGTTGC+TGG 0.509554 7_2:-84601373 Msa1084320:CDS
AGCATTACCAGTGCAGGGTT+AGG 0.511607 7_2:-84599508 Msa1084320:three_prime_UTR
AGACCTCTTCCGAAAGTTCG+TGG 0.513973 7_2:-84599364 Msa1084320:three_prime_UTR
AGATCTAGTTTAGGATATAG+TGG 0.514518 7_2:-84598381 Msa1084320:three_prime_UTR
GTCAGGGTAGCCAGAGTCAC+GGG 0.514833 7_2:+84598873 None:intergenic
TGTAACAGGCTGGCTGCTGT+TGG 0.515451 7_2:-84597801 Msa1084320:intron
CATACCCCTACTAGAATACA+TGG 0.515458 7_2:+84598006 None:intergenic
GCTGAGAGCATTACCAGTGC+AGG 0.519052 7_2:-84599514 Msa1084320:three_prime_UTR
TTACCACGAACTTTCGGAAG+AGG 0.521044 7_2:+84599361 None:intergenic
GATGACGAAGAGGGTGATAC+AGG 0.521079 7_2:-84601442 Msa1084320:CDS
GCAGGTCGACTACGTGGTGC+AGG 0.522305 7_2:+84599271 None:intergenic
TGGAAAGAAAATAAGGTCCA+TGG 0.522332 7_2:-84597527 Msa1084320:three_prime_UTR
GCTGGATAATCTCTATAAGA+TGG 0.523576 7_2:+84598895 None:intergenic
GCAAACTCCTTTATTGACCT+GGG 0.528469 7_2:-84600556 Msa1084320:three_prime_UTR
GTAGAAACTCTACTTCTTGG+AGG 0.530039 7_2:+84598952 None:intergenic
TCCTTCGCGATAACTTAGAC+GGG 0.530110 7_2:+84598759 None:intergenic
TTATCTTCATGATTCTGGAT+AGG 0.531353 7_2:+84602546 None:intergenic
CTGAAATTGATGAAGATGAA+AGG 0.532097 7_2:+84602734 None:intergenic
CTATCTATTCAAAACTCACA+TGG 0.532631 7_2:-84598345 Msa1084320:three_prime_UTR
TCTGTTGAAACAGTGCCTAA+TGG 0.533400 7_2:-84602492 Msa1084320:CDS
AGTGCCTAATGGTGTAGCTC+TGG 0.534979 7_2:-84602481 Msa1084320:CDS
TGTTCTTGATGCTGCGGTGG+AGG 0.537046 7_2:-84602520 Msa1084320:CDS
CGTCGATGCCTGTAAGAGCT+AGG 0.537152 7_2:-84599156 Msa1084320:three_prime_UTR
CTCCTCCAGCTAGATCCTAC+AGG 0.538173 7_2:-84599126 Msa1084320:three_prime_UTR
CCTCCGAAAGCGGTGAAAAG+AGG 0.540898 7_2:-84602642 Msa1084320:CDS
GCCTAATGGTGTAGCTCTGG+TGG 0.542445 7_2:-84602478 Msa1084320:CDS
GCCTTCACCTAACCCTGCAC+TGG 0.542638 7_2:+84599501 None:intergenic
TCAGGAGATCGAAGGTGAAG+TGG 0.543807 7_2:-84601488 Msa1084320:CDS
AGTCTTCTGAACACATGAGC+AGG 0.544172 7_2:+84599235 None:intergenic
AATCTCCTGTAGGATCTAGC+TGG 0.545605 7_2:+84599121 None:intergenic
TCTCCACGGTATGCTGATGC+TGG 0.548096 7_2:-84598577 Msa1084320:three_prime_UTR
TGTGTATCAGGCTCTCTTGG+TGG 0.548199 7_2:-84598204 Msa1084320:intron
CATATTTCTTAAGAAGAGCT+CGG 0.549726 7_2:+84599638 None:intergenic
AGAACATGCCAGGTGCTCGC+AGG 0.549789 7_2:-84599588 Msa1084320:three_prime_UTR
TAGATAACATTTGCAAGACA+TGG 0.549859 7_2:-84600911 Msa1084320:three_prime_UTR
GGGTAGCCAGAGTCACGGGC+TGG 0.551246 7_2:+84598877 None:intergenic
GAGCTTGCTAAGAACATGCC+AGG 0.553348 7_2:-84599598 Msa1084320:three_prime_UTR
GTCAATAAAGGAGTTTGCAA+AGG 0.555481 7_2:+84600561 None:intergenic
AGAAGATCAAAGATTACCAC+TGG 0.555676 7_2:+84601055 None:intergenic
TTGGGGAGATTACCGAAGCC+AGG 0.556224 7_2:-84601177 Msa1084320:CDS
GGGTGATGATATTATGGCAC+AGG 0.557778 7_2:-84600536 Msa1084320:intron
TCTCTTGGTGGTAGTGATGG+GGG 0.560113 7_2:-84598192 Msa1084320:three_prime_UTR
TGGCTACCCTGACCTGCATA+GGG 0.560943 7_2:-84598863 Msa1084320:three_prime_UTR
TCATCCAGATAACCCCTCCT+TGG 0.561200 7_2:+84598823 None:intergenic
TACGAGACGTATCCCTATGC+AGG 0.563411 7_2:+84598851 None:intergenic
AGGAGCTATCATATAAAACT+AGG 0.564088 7_2:+84597563 None:intergenic
AGGAGGGGTTATCTGGATGA+TGG 0.564427 7_2:-84598820 Msa1084320:three_prime_UTR
GTGGTAAACATGTTACTCAC+AGG 0.564528 7_2:-84599345 Msa1084320:three_prime_UTR
TATCTATTCAAAACTCACAT+GGG 0.565832 7_2:-84598344 Msa1084320:three_prime_UTR
TCATCACCAACATACTCCTC+AGG 0.566571 7_2:+84601544 None:intergenic
TCTGGCTGATGTAAAGGAAG+AGG 0.566817 7_2:-84601311 Msa1084320:CDS
GGTGGTGATTACTTATCTCG+TGG 0.569411 7_2:-84598150 Msa1084320:three_prime_UTR
TTTGCAAAGGAAACCTCGGC+AGG 0.569590 7_2:+84600574 None:intergenic
GTCTCGTACTGCACCAAGGA+GGG 0.574387 7_2:-84598836 Msa1084320:three_prime_UTR
GGAGATCGAAGGTGAAGTGG+AGG 0.574428 7_2:-84601485 Msa1084320:CDS
TGAGCATCTGGCTGATGTAA+AGG 0.575900 7_2:-84601317 Msa1084320:CDS
CCAAACCATGCCTCCGAAAG+CGG 0.576396 7_2:-84602652 Msa1084320:exon
GAAACTCTACTTCTTGGAGG+TGG 0.577034 7_2:+84598955 None:intergenic
TACAGATTATGGCTCTCAGG+TGG 0.577668 7_2:-84598932 Msa1084320:three_prime_UTR
GGTCAGGGTAGCCAGAGTCA+CGG 0.577760 7_2:+84598872 None:intergenic
CTTACAGGCATCGACGTGAC+AGG 0.580546 7_2:+84599163 None:intergenic
GTCCTTCGCGATAACTTAGA+CGG 0.580638 7_2:+84598758 None:intergenic
AGCAGTTATATGAGTGGTAG+CGG 0.581735 7_2:-84597974 Msa1084320:three_prime_UTR
ACCAGTGCAGGGTTAGGTGA+AGG 0.583452 7_2:-84599502 Msa1084320:three_prime_UTR
TCCTCAGACTAAAAGGAACA+AGG 0.583768 7_2:-84601143 Msa1084320:CDS
GAAACGTCCTTATGCTGCCA+TGG 0.584363 7_2:-84598704 Msa1084320:intron
AGACGGGGAGGTGGAGAAGG+AGG 0.589545 7_2:+84598775 None:intergenic
CAGATTAATGGCAAACAATG+TGG 0.592242 7_2:-84600969 Msa1084320:three_prime_UTR
GATTTGACTATAGTAGAAGA+TGG 0.595203 7_2:-84600712 Msa1084320:three_prime_UTR
TTGCCAATCTTCCAATCTTG+CGG 0.597275 7_2:+84599311 None:intergenic
GGAATTGGAAGTATTTGTTG+GGG 0.599965 7_2:-84601251 Msa1084320:CDS
CATACCTGCTAATCTCCTGT+AGG 0.600207 7_2:+84599111 None:intergenic
GGAACAAGTTGAAGTTAGAA+CGG 0.601115 7_2:-84601290 Msa1084320:CDS
TGGGGCATATAGCAGTCGAC+AGG 0.602038 7_2:-84598325 Msa1084320:three_prime_UTR
TGGAGTTGATAAACCTGCCG+AGG 0.608661 7_2:-84600587 Msa1084320:three_prime_UTR
TATTCACCTCTGCCATAACT+CGG 0.609251 7_2:+84598300 None:intergenic
TGGTACGCATGCTGCTGCTG+TGG 0.613596 7_2:-84599542 Msa1084320:three_prime_UTR
GGAAGAACCTGAAGAGAATG+TGG 0.615460 7_2:-84601464 Msa1084320:CDS
AACGGAAACGCAGAAGCAGA+AGG 0.617608 7_2:-84601272 Msa1084320:CDS
ACATAATCTTCATCCCATGA+AGG 0.617754 7_2:+84599661 None:intergenic
ATATGTTTATGAAGAAGTCG+AGG 0.618879 7_2:-84601395 Msa1084320:CDS
GAGAATGTGGATGACGAAGA+GGG 0.619183 7_2:-84601451 Msa1084320:CDS
TTCTGCGGCAAAGAAAGCCA+AGG 0.619637 7_2:-84602619 Msa1084320:CDS
CTGAGAGCATTACCAGTGCA+GGG 0.619976 7_2:-84599513 Msa1084320:three_prime_UTR
CAGATAGTGTGTCATAATCG+CGG 0.620927 7_2:+84598731 None:intergenic
ACGTATCCCTATGCAGGTCA+GGG 0.623320 7_2:+84598857 None:intergenic
AGAGGGTGATACAGGTGATG+AGG 0.624317 7_2:-84601434 Msa1084320:CDS
CCTCAGACTAAAAGGAACAA+GGG 0.625261 7_2:-84601142 Msa1084320:CDS
ATCTACTCATCAAGTTATGG+TGG 0.625887 7_2:-84598168 Msa1084320:three_prime_UTR
GGAGTTTGCAAAGGAAACCT+CGG 0.629424 7_2:+84600570 None:intergenic
TGGTGATGACTATGATGAGA+GGG 0.632078 7_2:-84601530 Msa1084320:CDS
CTCATGTGTTCAGAAGACTT+GGG 0.633447 7_2:-84599231 Msa1084320:three_prime_UTR
TCACTAGAAGGTCTAACTGG+TGG 0.635479 7_2:+84599199 None:intergenic
ATAAGATGGACGTCTTTGAG+AGG 0.637078 7_2:+84598909 None:intergenic
GAGAGATTATGGTCGACCTG+TGG 0.637218 7_2:-84598983 Msa1084320:three_prime_UTR
TATTCTAGTAGGGGTATGAA+CGG 0.637498 7_2:-84598001 Msa1084320:three_prime_UTR
CAGTGGTTCCCGATATAGAG+AGG 0.638252 7_2:-84598512 Msa1084320:three_prime_UTR
TATAGCAGACAATGTAGAGG+AGG 0.642455 7_2:-84601638 Msa1084320:intron
TCTTATAGCAGACAATGTAG+AGG 0.643175 7_2:-84601641 Msa1084320:intron
TTTGATTCATCCGCTCTCTG+TGG 0.643441 7_2:-84602862 Msa1084320:five_prime_UTR
TCATGTTCTTGATGCTGCGG+TGG 0.643800 7_2:-84602523 Msa1084320:CDS
TACAGAGCATGATCTGAGGA+AGG 0.644051 7_2:-84601212 Msa1084320:CDS
ATATAGAAAACCACAGAGAG+CGG 0.644388 7_2:+84602852 None:intergenic
GCAAGATTGGAAGATTGGCA+AGG 0.644404 7_2:-84599309 Msa1084320:three_prime_UTR
TCGTCCATGTATTCTAGTAG+GGG 0.646419 7_2:-84598010 Msa1084320:three_prime_UTR
CGTTTAGACTATGACTATGG+AGG 0.646761 7_2:-84598535 Msa1084320:three_prime_UTR
GAGGGAAATTGAACAAGACG+AGG 0.648511 7_2:-84601512 Msa1084320:CDS
GTAGGATCTAGCTGGAGGAG+AGG 0.648717 7_2:+84599129 None:intergenic
CCCCGTCTAAGTTATCGCGA+AGG 0.649105 7_2:-84598760 Msa1084320:three_prime_UTR
TCTCGTACTGCACCAAGGAG+GGG 0.650220 7_2:-84598835 Msa1084320:three_prime_UTR
TATGTTTATGAAGAAGTCGA+GGG 0.652329 7_2:-84601394 Msa1084320:CDS
AACAATGAGAGAACGAACTG+TGG 0.653907 7_2:-84600688 Msa1084320:three_prime_UTR
GATAGTGTGTCATAATCGCG+GGG 0.655055 7_2:+84598733 None:intergenic
GACGAGGGTCAGGAGATCGA+AGG 0.655187 7_2:-84601496 Msa1084320:CDS
AGCGGTGAAAAGAGGTTCTG+CGG 0.657264 7_2:-84602634 Msa1084320:CDS
CAGGAACCGAGTTATGGCAG+AGG 0.657705 7_2:-84598306 Msa1084320:intron
TATGATCCTGAGGAGTATGT+TGG 0.661452 7_2:-84601550 Msa1084320:CDS
TTATCAGGAGTATGATCCTG+AGG 0.661619 7_2:-84601560 Msa1084320:CDS
GTGATGATCGAAGACTTGAA+AGG 0.662282 7_2:-84598798 Msa1084320:three_prime_UTR
ATCAGGATGATATTTCTCCA+CGG 0.662731 7_2:-84598591 Msa1084320:intron
CTCCTGTAGGATCTAGCTGG+AGG 0.663917 7_2:+84599124 None:intergenic
TAATCTTCATCCCATGAAGG+AGG 0.664362 7_2:+84599664 None:intergenic
ATGCTACAGAGCATGATCTG+AGG 0.664679 7_2:-84601216 Msa1084320:CDS
GAATTGGAAGTATTTGTTGG+GGG 0.666063 7_2:-84601250 Msa1084320:CDS
GGTGCAGGTCGACTACGTGA+AGG 0.668602 7_2:+84599286 None:intergenic
ATCTATTCAAAACTCACATG+GGG 0.671395 7_2:-84598343 Msa1084320:three_prime_UTR
AGCTCTTCTTAAGAAATATG+GGG 0.672819 7_2:-84599635 Msa1084320:three_prime_UTR
CGTCTCGTACTGCACCAAGG+AGG 0.672911 7_2:-84598837 Msa1084320:three_prime_UTR
GGTAGTAGCAGTTATATGAG+TGG 0.673587 7_2:-84597980 Msa1084320:three_prime_UTR
TCTTCTTAAGAAATATGGGG+CGG 0.674967 7_2:-84599632 Msa1084320:three_prime_UTR
ACATGAGCAGGTCGACTCTG+TGG 0.675687 7_2:+84599247 None:intergenic
TGGTAAACATGTTACTCACA+GGG 0.677007 7_2:-84599344 Msa1084320:three_prime_UTR
GCACCAGCATCAGCATACCG+TGG 0.677223 7_2:+84598574 None:intergenic
TCGCGATAACTTAGACGGGG+AGG 0.679135 7_2:+84598763 None:intergenic
AGAGAATGTGGATGACGAAG+AGG 0.681217 7_2:-84601452 Msa1084320:CDS
TTGGTGATGACTATGATGAG+AGG 0.686384 7_2:-84601531 Msa1084320:CDS
TAATCATGTTCTTGATGCTG+CGG 0.688082 7_2:-84602526 Msa1084320:CDS
CCTTCGCGATAACTTAGACG+GGG 0.689612 7_2:+84598760 None:intergenic
AGTTATATGAGTGGTAGCGG+TGG 0.689819 7_2:-84597971 Msa1084320:three_prime_UTR
GTGCCATAATATCATCACCC+AGG 0.702483 7_2:+84600539 None:intergenic
AGTATCACTGTCCTGACATG+TGG 0.709339 7_2:+84600941 None:intergenic
AGGGAAATTGAACAAGACGA+GGG 0.710596 7_2:-84601511 Msa1084320:CDS
TGTGGTGCAGGTCGACTACG+TGG 0.725851 7_2:+84599265 None:intergenic
ATACGTCTCGTACTGCACCA+AGG 0.731756 7_2:-84598840 Msa1084320:three_prime_UTR
TGATGATGAGCATGCCAGTG+AGG 0.745670 7_2:-84601350 Msa1084320:CDS
ATAGTGTGTCATAATCGCGG+GGG 0.773160 7_2:+84598734 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAATTGAAATTATAAAAT+TGG + chr7_2:84597580-84597599 None:intergenic 10.0%
!! TAATTTCAATTCAATATTAT+TGG - chr7_2:84597586-84597605 Msa1084320:three_prime_UTR 10.0%
!! AATCATAAAAAAATAAAAAG+AGG + chr7_2:84597915-84597934 None:intergenic 10.0%
!!! ATTTTTTTATGATTTTTTTG+TGG - chr7_2:84597921-84597940 Msa1084320:intron 10.0%
!!! TTTTATAAATACTATAATGT+TGG - chr7_2:84598645-84598664 Msa1084320:intron 10.0%
!!! TTTATAGTAAACTATATTTT+TGG - chr7_2:84599986-84600005 Msa1084320:intron 10.0%
!!! ATTTTAAACATTCATTTTAA+TGG - chr7_2:84601679-84601698 Msa1084320:intron 10.0%
!!! AATTTCAGATTTTGATTTTA+GGG - chr7_2:84597632-84597651 Msa1084320:three_prime_UTR 15.0%
!! AAAAAATAAAAAGAGGAAAA+GGG + chr7_2:84597908-84597927 None:intergenic 15.0%
!! AAAAAAATAAAAAGAGGAAA+AGG + chr7_2:84597909-84597928 None:intergenic 15.0%
!! AATAAAATAAAAGAACTTCA+TGG + chr7_2:84598527-84598546 None:intergenic 15.0%
!! TAATAAAATCTGAAAAACAA+TGG + chr7_2:84600201-84600220 None:intergenic 15.0%
!!! TTTAAAATAGAATTTTACCA+TGG + chr7_2:84601667-84601686 None:intergenic 15.0%
!!! TTTTATATATGGCTAAATAT+TGG - chr7_2:84602265-84602284 Msa1084320:intron 15.0%
!! TTAATAAGAGAGAGAAATTT+GGG + chr7_2:84597537-84597556 None:intergenic 20.0%
!! TTTAATAAGAGAGAGAAATT+TGG + chr7_2:84597538-84597557 None:intergenic 20.0%
!! CTCTTATTAAATTCAGAATT+AGG - chr7_2:84597547-84597566 Msa1084320:three_prime_UTR 20.0%
!! CAATTCAATATTATTGGATT+CGG - chr7_2:84597592-84597611 Msa1084320:three_prime_UTR 20.0%
!!! CAATTTCAGATTTTGATTTT+AGG - chr7_2:84597631-84597650 Msa1084320:three_prime_UTR 20.0%
!!! TGTGGAATTTTTTCATTATT+TGG - chr7_2:84597939-84597958 Msa1084320:intron 20.0%
!! GATATAACATTATATCATAG+CGG - chr7_2:84598208-84598227 Msa1084320:intron 20.0%
!! TCATTAACAGTTAAAAACAA+GGG + chr7_2:84599562-84599581 None:intergenic 20.0%
!! TTCATTAACAGTTAAAAACA+AGG + chr7_2:84599563-84599582 None:intergenic 20.0%
!!! TATTATCGCAATTTTAAAAG+TGG - chr7_2:84600409-84600428 Msa1084320:intron 20.0%
!!! ATTCTTAAATTTTATTCTGC+TGG - chr7_2:84602292-84602311 Msa1084320:intron 20.0%
!!! AAATATAAAGATGTCATTTG+AGG + chr7_2:84602463-84602482 None:intergenic 20.0%
!! TAAACATATCTAAATGTAAC+AGG - chr7_2:84602536-84602555 Msa1084320:CDS 20.0%
!!! TAATCTTTTCTTCAAAATGA+CGG + chr7_2:84602610-84602629 None:intergenic 20.0%
!! TTGAAGTTATTCAATTTATG+AGG - chr7_2:84602715-84602734 Msa1084320:five_prime_UTR 20.0%
!! GGTTAATTCTAAATGTAAAA+AGG - chr7_2:84602736-84602755 Msa1084320:five_prime_UTR 20.0%
!! AAAAAAAAAATCCAAATCCA+TGG + chr7_2:84602844-84602863 None:intergenic 20.0%
! GATGATTATCAAGTGAATTT+AGG - chr7_2:84598055-84598074 Msa1084320:intron 25.0%
!! TTATCAAGTGAATTTAGGTT+AGG - chr7_2:84598060-84598079 Msa1084320:intron 25.0%
!! TATCAAGTGAATTTAGGTTA+GGG - chr7_2:84598061-84598080 Msa1084320:intron 25.0%
! TCTTTAATGTTGTCAAATAG+TGG - chr7_2:84598107-84598126 Msa1084320:intron 25.0%
!!! TTGTGAATTTTGATGGTTTT+GGG - chr7_2:84598284-84598303 Msa1084320:intron 25.0%
!!! TTTTGTACTTCTGTCATTTT+GGG - chr7_2:84598462-84598481 Msa1084320:intron 25.0%
!!! ATCTTTTTCATATTCATCTG+TGG + chr7_2:84598748-84598767 None:intergenic 25.0%
!!! AGATTTTGAGGATAATTATC+AGG - chr7_2:84598776-84598795 Msa1084320:three_prime_UTR 25.0%
! TGACTACAATTTCAGATTAA+TGG - chr7_2:84599370-84599389 Msa1084320:three_prime_UTR 25.0%
! TAATAGTAGTAAGCATTACT+CGG + chr7_2:84599520-84599539 None:intergenic 25.0%
! AAGGAGAAATTGAAACATTA+TGG - chr7_2:84599600-84599619 Msa1084320:three_prime_UTR 25.0%
! ATAAAAATGAACCACTATTG+AGG + chr7_2:84599971-84599990 None:intergenic 25.0%
! ATTACTTATAAAAGCAACAC+TGG - chr7_2:84600037-84600056 Msa1084320:intron 25.0%
! TTACTTATAAAAGCAACACT+GGG - chr7_2:84600038-84600057 Msa1084320:intron 25.0%
! CTAGACATTAAAACTACTTT+AGG + chr7_2:84600150-84600169 None:intergenic 25.0%
! TTAAGCACAAAACTCTTATT+AGG + chr7_2:84600578-84600597 None:intergenic 25.0%
!!! ATAAGAGTTTTGTGCTTAAT+AGG - chr7_2:84600579-84600598 Msa1084320:three_prime_UTR 25.0%
!!! AATTATGGATTTGTTACGTT+TGG - chr7_2:84600789-84600808 Msa1084320:intron 25.0%
! TAATAACAGAATCTCTACTA+TGG + chr7_2:84601279-84601298 None:intergenic 25.0%
!!! CTTATTTTTCATTTCTCATC+AGG - chr7_2:84601743-84601762 Msa1084320:intron 25.0%
! TATCTATTCAAAACTCACAT+GGG - chr7_2:84602007-84602026 Msa1084320:intron 25.0%
!! TGGAAGTAGTGTTTTATATA+TGG - chr7_2:84602254-84602273 Msa1084320:intron 25.0%
! ATCTTTATATTTCTCCCAAT+GGG - chr7_2:84602471-84602490 Msa1084320:intron 25.0%
! ATATGTTTAGACAAATTCAC+CGG + chr7_2:84602525-84602544 None:intergenic 25.0%
!! AATCTTTTCTTCAAAATGAC+GGG + chr7_2:84602609-84602628 None:intergenic 25.0%
! GTTCATTTGGAAAGAAAATA+AGG - chr7_2:84602817-84602836 Msa1084320:five_prime_UTR 25.0%
CTGAAATTGATGAAGATGAA+AGG + chr7_2:84597620-84597639 None:intergenic 30.0%
!! CAACACAAGAAAGTGTTATT+CGG + chr7_2:84597667-84597686 None:intergenic 30.0%
GAATAACACTTTCTTGTGTT+GGG - chr7_2:84597666-84597685 Msa1084320:three_prime_UTR 30.0%
TTATCTTCATGATTCTGGAT+AGG + chr7_2:84597808-84597827 None:intergenic 30.0%
CATGATTATCTTCATGATTC+TGG + chr7_2:84597813-84597832 None:intergenic 30.0%
ATTATGTTTGATGCGTATTG+TGG - chr7_2:84597980-84597999 Msa1084320:three_prime_UTR 30.0%
! ATCAAGTGAATTTAGGTTAG+GGG - chr7_2:84598062-84598081 Msa1084320:intron 30.0%
TATAGGCTATAAACACATAG+CGG - chr7_2:84598131-84598150 Msa1084320:intron 30.0%
!! CTTGTGAATTTTGATGGTTT+TGG - chr7_2:84598283-84598302 Msa1084320:intron 30.0%
! TTTGGAAGTTATGGGATTTT+TGG - chr7_2:84598377-84598396 Msa1084320:three_prime_UTR 30.0%
TTTGATAGACCGTGATTAAA+TGG - chr7_2:84598420-84598439 Msa1084320:intron 30.0%
!! GTTTTGTACTTCTGTCATTT+TGG - chr7_2:84598461-84598480 Msa1084320:intron 30.0%
AGGTAACAACTATTGTGTAT+AGG - chr7_2:84598491-84598510 Msa1084320:intron 30.0%
GGTAACAACTATTGTGTATA+GGG - chr7_2:84598492-84598511 Msa1084320:intron 30.0%
GCTGGATTGATTATAGAAAA+TGG - chr7_2:84598612-84598631 Msa1084320:intron 30.0%
!!! AAATTCGAGAGTGTTTTGAT+CGG - chr7_2:84598669-84598688 Msa1084320:intron 30.0%
! AGATGAACACTTAGATTTTG+AGG - chr7_2:84598764-84598783 Msa1084320:three_prime_UTR 30.0%
ATATGTTTATGAAGAAGTCG+AGG - chr7_2:84598956-84598975 Msa1084320:three_prime_UTR 30.0%
TATGTTTATGAAGAAGTCGA+GGG - chr7_2:84598957-84598976 Msa1084320:three_prime_UTR 30.0%
!! AAGGAATTGGAAGTATTTGT+TGG - chr7_2:84599098-84599117 Msa1084320:intron 30.0%
!! AGGAATTGGAAGTATTTGTT+GGG - chr7_2:84599099-84599118 Msa1084320:intron 30.0%
TAGATAACATTTGCAAGACA+TGG - chr7_2:84599440-84599459 Msa1084320:intron 30.0%
!!! AAGCTGTAAGTCTTTTTTCT+GGG - chr7_2:84599470-84599489 Msa1084320:intron 30.0%
AATAGTAGTAAGCATTACTC+GGG + chr7_2:84599519-84599538 None:intergenic 30.0%
GTTTCAATTTCTCCTTTAAC+TGG + chr7_2:84599596-84599615 None:intergenic 30.0%
TTATGGAGTTGAAAGTTTCA+AGG - chr7_2:84599617-84599636 Msa1084320:three_prime_UTR 30.0%
GATTTGACTATAGTAGAAGA+TGG - chr7_2:84599639-84599658 Msa1084320:three_prime_UTR 30.0%
! TTTTGCAGGTTCAATATATC+AGG + chr7_2:84599879-84599898 None:intergenic 30.0%
TATATTGAACCTGCAAAAGA+TGG - chr7_2:84599881-84599900 Msa1084320:intron 30.0%
TTTGATCTCATTCAATCGTT+TGG - chr7_2:84599907-84599926 Msa1084320:intron 30.0%
TTGATCTCATTCAATCGTTT+GGG - chr7_2:84599908-84599927 Msa1084320:intron 30.0%
ATATTTAACCTAGTCTACTC+TGG - chr7_2:84600097-84600116 Msa1084320:intron 30.0%
AATCTGAAAAACAATGGACA+TGG + chr7_2:84600195-84600214 None:intergenic 30.0%
GACAGAAATAAGATGATGAT+CGG - chr7_2:84600317-84600336 Msa1084320:intron 30.0%
!! ATGTCAGAGGTATAATTTTC+AGG - chr7_2:84600476-84600495 Msa1084320:intron 30.0%
!! TGTCAGAGGTATAATTTTCA+GGG - chr7_2:84600477-84600496 Msa1084320:intron 30.0%
TGTATGTTATCGTATGATTG+TGG - chr7_2:84600528-84600547 Msa1084320:intron 30.0%
TCAGTTACACCAAAAACAAA+TGG + chr7_2:84600619-84600638 None:intergenic 30.0%
ATCAAATGCATCTAAATTGC+AGG - chr7_2:84600638-84600657 Msa1084320:three_prime_UTR 30.0%
CATATTTCTTAAGAAGAGCT+CGG + chr7_2:84600716-84600735 None:intergenic 30.0%
GAGCTCTTCTTAAGAAATAT+GGG - chr7_2:84600715-84600734 Msa1084320:three_prime_UTR 30.0%
AGCTCTTCTTAAGAAATATG+GGG - chr7_2:84600716-84600735 Msa1084320:three_prime_UTR 30.0%
AGTAGAGTTTCTACAGATTA+TGG - chr7_2:84601408-84601427 Msa1084320:CDS 30.0%
ATAAGTTAGCAAAGAACAAC+AGG + chr7_2:84601922-84601941 None:intergenic 30.0%
!!! TTCCTCACATTTTGATTAGT+AGG - chr7_2:84601941-84601960 Msa1084320:intron 30.0%
! AGATCTAGTTTAGGATATAG+TGG - chr7_2:84601970-84601989 Msa1084320:intron 30.0%
CTATCTATTCAAAACTCACA+TGG - chr7_2:84602006-84602025 Msa1084320:intron 30.0%
ATCTATTCAAAACTCACATG+GGG - chr7_2:84602008-84602027 Msa1084320:intron 30.0%
TTTCTTGTATGTTGTGTATC+AGG - chr7_2:84602135-84602154 Msa1084320:intron 30.0%
ATGTTACTATCCTTTCTGAT+TGG - chr7_2:84602234-84602253 Msa1084320:intron 30.0%
! CTTAAATTTTATTCTGCTGG+TGG - chr7_2:84602295-84602314 Msa1084320:intron 30.0%
GGATCTAGATCTTATTATTG+AGG - chr7_2:84602404-84602423 Msa1084320:intron 30.0%
GGTAAGTCATCTTATTCTTT+AGG - chr7_2:84602425-84602444 Msa1084320:intron 30.0%
AAGTCATCTTATTCTTTAGG+CGG - chr7_2:84602428-84602447 Msa1084320:intron 30.0%
CATCTTTATATTTCTCCCAA+TGG - chr7_2:84602470-84602489 Msa1084320:intron 30.0%
! GATGTGAATTTTGTAGCTTA+TGG - chr7_2:84602572-84602591 Msa1084320:CDS 30.0%
! TTGGAATTTTCCACTATTCA+AGG - chr7_2:84602650-84602669 Msa1084320:exon 30.0%
TTGAAGTAATCCTTGAATAG+TGG + chr7_2:84602663-84602682 None:intergenic 30.0%
TACTTCAATCCAAGATATCT+TGG - chr7_2:84602675-84602694 Msa1084320:five_prime_UTR 30.0%
AGGAGCTATCATATAAAACT+AGG + chr7_2:84602791-84602810 None:intergenic 30.0%
!!! TAGTTTTATATGATAGCTCC+TGG - chr7_2:84602790-84602809 Msa1084320:five_prime_UTR 30.0%
ATATAGAAAACCACAGAGAG+CGG + chr7_2:84597502-84597521 None:intergenic 35.0%
CGAATAACACTTTCTTGTGT+TGG - chr7_2:84597665-84597684 Msa1084320:three_prime_UTR 35.0%
TAATCATGTTCTTGATGCTG+CGG - chr7_2:84597825-84597844 Msa1084320:intron 35.0%
ATTGTGGCTGTTATGTGATA+TGG - chr7_2:84597996-84598015 Msa1084320:three_prime_UTR 35.0%
TGTTGTCAAATAGTGGCTAT+AGG - chr7_2:84598114-84598133 Msa1084320:intron 35.0%
! ATACGAGTGTTGTCTAATAG+TGG - chr7_2:84598186-84598205 Msa1084320:three_prime_UTR 35.0%
! GGTTGTCTTGTGAATTTTGA+TGG - chr7_2:84598277-84598296 Msa1084320:intron 35.0%
TAACTTCCAAAGTACACCAA+GGG + chr7_2:84598368-84598387 None:intergenic 35.0%
ATAACTTCCAAAGTACACCA+AGG + chr7_2:84598369-84598388 None:intergenic 35.0%
! TTGGTGTACTTTGGAAGTTA+TGG - chr7_2:84598368-84598387 Msa1084320:three_prime_UTR 35.0%
! TGGTGTACTTTGGAAGTTAT+GGG - chr7_2:84598369-84598388 Msa1084320:three_prime_UTR 35.0%
TGTGCAGTACCATTTAATCA+CGG + chr7_2:84598432-84598451 None:intergenic 35.0%
! GTGTTTTATCTCATGTGATG+CGG - chr7_2:84598586-84598605 Msa1084320:three_prime_UTR 35.0%
! TGTTTTATCTCATGTGATGC+GGG - chr7_2:84598587-84598606 Msa1084320:three_prime_UTR 35.0%
!!! AATTCGAGAGTGTTTTGATC+GGG - chr7_2:84598670-84598689 Msa1084320:intron 35.0%
TCTTATAGCAGACAATGTAG+AGG - chr7_2:84598710-84598729 Msa1084320:three_prime_UTR 35.0%
! GGAACAAGTTGAAGTTAGAA+CGG - chr7_2:84599061-84599080 Msa1084320:intron 35.0%
!! GGAATTGGAAGTATTTGTTG+GGG - chr7_2:84599100-84599119 Msa1084320:intron 35.0%
!! GAATTGGAAGTATTTGTTGG+GGG - chr7_2:84599101-84599120 Msa1084320:intron 35.0%
! AGGAAGGTTTTCAGTAAAGT+TGG - chr7_2:84599155-84599174 Msa1084320:three_prime_UTR 35.0%
! GGAAGGTTTTCAGTAAAGTT+GGG - chr7_2:84599156-84599175 Msa1084320:three_prime_UTR 35.0%
! GAAGGTTTTCAGTAAAGTTG+GGG - chr7_2:84599157-84599176 Msa1084320:three_prime_UTR 35.0%
AGAAGATCAAAGATTACCAC+TGG + chr7_2:84599299-84599318 None:intergenic 35.0%
GGTAATCTTTGATCTTCTCA+TGG - chr7_2:84599301-84599320 Msa1084320:three_prime_UTR 35.0%
CAGATTAATGGCAAACAATG+TGG - chr7_2:84599382-84599401 Msa1084320:three_prime_UTR 35.0%
CATTTGCAAGACATGGAAAA+AGG - chr7_2:84599447-84599466 Msa1084320:intron 35.0%
!!! GAAGCTGTAAGTCTTTTTTC+TGG - chr7_2:84599469-84599488 Msa1084320:intron 35.0%
AAACTTCTGATGCCAGTTAA+AGG - chr7_2:84599581-84599600 Msa1084320:three_prime_UTR 35.0%
!!! CAGAAGACAGATGTTGTTTT+TGG - chr7_2:84599744-84599763 Msa1084320:intron 35.0%
GTCAATAAAGGAGTTTGCAA+AGG + chr7_2:84599793-84599812 None:intergenic 35.0%
TTATGGCACAGGTATATTTC+TGG - chr7_2:84599826-84599845 Msa1084320:intron 35.0%
!! TCATTTCCTTGCTTTTGTCA+AGG - chr7_2:84599852-84599871 Msa1084320:intron 35.0%
!! CATTTCCTTGCTTTTGTCAA+GGG - chr7_2:84599853-84599872 Msa1084320:intron 35.0%
! ATCAAAGAACCATCTTTTGC+AGG + chr7_2:84599893-84599912 None:intergenic 35.0%
TCATTCAATCGTTTGGGAAT+TGG - chr7_2:84599914-84599933 Msa1084320:intron 35.0%
CATTCAATCGTTTGGGAATT+GGG - chr7_2:84599915-84599934 Msa1084320:intron 35.0%
! TTGTTGATTGCTATGATGCA+CGG - chr7_2:84600239-84600258 Msa1084320:intron 35.0%
!! GAGTTTTGTGCTTAATAGGT+TGG - chr7_2:84600583-84600602 Msa1084320:three_prime_UTR 35.0%
!!! GAAGTTGTGCCATTTGTTTT+TGG - chr7_2:84600607-84600626 Msa1084320:three_prime_UTR 35.0%
ACATAATCTTCATCCCATGA+AGG + chr7_2:84600693-84600712 None:intergenic 35.0%
CGAGCTCTTCTTAAGAAATA+TGG - chr7_2:84600714-84600733 Msa1084320:three_prime_UTR 35.0%
TCTTCTTAAGAAATATGGGG+CGG - chr7_2:84600719-84600738 Msa1084320:three_prime_UTR 35.0%
CTTCTTTCAGGCAAAAGTTA+GGG - chr7_2:84600953-84600972 Msa1084320:three_prime_UTR 35.0%
ACATGTTTACCACGAACTTT+CGG + chr7_2:84600999-84601018 None:intergenic 35.0%
TGGTAAACATGTTACTCACA+GGG - chr7_2:84601007-84601026 Msa1084320:exon 35.0%
TCTGTAGAAACTCTACTTCT+TGG + chr7_2:84601405-84601424 None:intergenic 35.0%
GCTGGATAATCTCTATAAGA+TGG + chr7_2:84601459-84601478 None:intergenic 35.0%
! AATTTTACCATGGCAGCATA+AGG + chr7_2:84601657-84601676 None:intergenic 35.0%
ATCAGGATGATATTTCTCCA+CGG - chr7_2:84601760-84601779 Msa1084320:intron 35.0%
AGTCTAAACGAGATCTTGAT+TGG + chr7_2:84601806-84601825 None:intergenic 35.0%
TCTCGTTTAGACTATGACTA+TGG - chr7_2:84601813-84601832 Msa1084320:intron 35.0%
AGCCTACTAATCAAAATGTG+AGG + chr7_2:84601946-84601965 None:intergenic 35.0%
! AGGCTTGAAAGATCTAGTTT+AGG - chr7_2:84601961-84601980 Msa1084320:intron 35.0%
ATCTACTCATCAAGTTATGG+TGG - chr7_2:84602183-84602202 Msa1084320:intron 35.0%
AACACTACTTCCAATCAGAA+AGG + chr7_2:84602247-84602266 None:intergenic 35.0%
! TTTTATTCTGCTGGTGGTTT+AGG - chr7_2:84602301-84602320 Msa1084320:intron 35.0%
ATTCGTCCATGTATTCTAGT+AGG - chr7_2:84602339-84602358 Msa1084320:intron 35.0%
TTCGTCCATGTATTCTAGTA+GGG - chr7_2:84602340-84602359 Msa1084320:intron 35.0%
! TATTCTAGTAGGGGTATGAA+CGG - chr7_2:84602350-84602369 Msa1084320:intron 35.0%
CATATCTAAATGTAACAGGC+TGG - chr7_2:84602540-84602559 Msa1084320:CDS 35.0%
TGCTGAGTTATAGACTGATT+TGG - chr7_2:84602631-84602650 Msa1084320:CDS 35.0%
AGAGAAGATCCAAGATATCT+TGG + chr7_2:84602687-84602706 None:intergenic 35.0%
TGGAAAGAAAATAAGGTCCA+TGG - chr7_2:84602824-84602843 Msa1084320:five_prime_UTR 35.0%
GAAAATAAGGTCCATGGATT+TGG - chr7_2:84602830-84602849 Msa1084320:five_prime_UTR 35.0%
!! TGTGGCTTTTGAAGAAACCT+TGG + chr7_2:84597752-84597771 None:intergenic 40.0%
!! TTGCTGTTGATTCTGAGTTG+TGG + chr7_2:84597770-84597789 None:intergenic 40.0%
TCATGATTCTGGATAGGTTC+AGG + chr7_2:84597802-84597821 None:intergenic 40.0%
TCTGTTGAAACAGTGCCTAA+TGG - chr7_2:84597859-84597878 Msa1084320:intron 40.0%
! GGTTAGGGGAAATTTTCTAC+TGG - chr7_2:84598076-84598095 Msa1084320:intron 40.0%
! GGTGATAGTGAATGAAGTGA+TGG - chr7_2:84598315-84598334 Msa1084320:three_prime_UTR 40.0%
!!! TCTGTCATTTTGGGAACTTG+AGG - chr7_2:84598471-84598490 Msa1084320:intron 40.0%
TATAGCAGACAATGTAGAGG+AGG - chr7_2:84598713-84598732 Msa1084320:three_prime_UTR 40.0%
AGACAATGTAGAGGAGGTTA+AGG - chr7_2:84598719-84598738 Msa1084320:three_prime_UTR 40.0%
! TTATCAGGAGTATGATCCTG+AGG - chr7_2:84598791-84598810 Msa1084320:three_prime_UTR 40.0%
! TATGATCCTGAGGAGTATGT+TGG - chr7_2:84598801-84598820 Msa1084320:three_prime_UTR 40.0%
!! TTGGTGATGACTATGATGAG+AGG - chr7_2:84598820-84598839 Msa1084320:three_prime_UTR 40.0%
! TGGTGATGACTATGATGAGA+GGG - chr7_2:84598821-84598840 Msa1084320:three_prime_UTR 40.0%
AGGGAAATTGAACAAGACGA+GGG - chr7_2:84598840-84598859 Msa1084320:three_prime_UTR 40.0%
CGTTGAATCCTCAGACTAAA+AGG - chr7_2:84599201-84599220 Msa1084320:three_prime_UTR 40.0%
TCCTCAGACTAAAAGGAACA+AGG - chr7_2:84599208-84599227 Msa1084320:three_prime_UTR 40.0%
CCTCAGACTAAAAGGAACAA+GGG - chr7_2:84599209-84599228 Msa1084320:three_prime_UTR 40.0%
GACAGAGCTAAAAAATCCAG+TGG - chr7_2:84599280-84599299 Msa1084320:three_prime_UTR 40.0%
ATTACATCTTGCCACCTTCA+AGG - chr7_2:84599536-84599555 Msa1084320:three_prime_UTR 40.0%
GTTAAAAACAAGGGCCTTGA+AGG + chr7_2:84599553-84599572 None:intergenic 40.0%
AACAATGAGAGAACGAACTG+TGG - chr7_2:84599663-84599682 Msa1084320:three_prime_UTR 40.0%
TGTCTTCTGCAATCGCTTAT+AGG + chr7_2:84599733-84599752 None:intergenic 40.0%
TGCAAACTCCTTTATTGACC+TGG - chr7_2:84599794-84599813 Msa1084320:intron 40.0%
GCAAACTCCTTTATTGACCT+GGG - chr7_2:84599795-84599814 Msa1084320:intron 40.0%
ATCATCACCCAGGTCAATAA+AGG + chr7_2:84599805-84599824 None:intergenic 40.0%
TGACCTGGGTGATGATATTA+TGG - chr7_2:84599809-84599828 Msa1084320:intron 40.0%
CCAACATAAATGTGTACCGA+TGG + chr7_2:84599941-84599960 None:intergenic 40.0%
CCATCGGTACACATTTATGT+TGG - chr7_2:84599938-84599957 Msa1084320:intron 40.0%
TTGGCTTCAAACCTCAATAG+TGG - chr7_2:84599957-84599976 Msa1084320:intron 40.0%
TTTAACCTAGTCTACTCTGG+AGG - chr7_2:84600100-84600119 Msa1084320:intron 40.0%
GAAAAACAATGGACATGGCA+AGG + chr7_2:84600190-84600209 None:intergenic 40.0%
TTGATTTACTGCCTCCTTCA+TGG - chr7_2:84600676-84600695 Msa1084320:three_prime_UTR 40.0%
TGATTTACTGCCTCCTTCAT+GGG - chr7_2:84600677-84600696 Msa1084320:three_prime_UTR 40.0%
TAATCTTCATCCCATGAAGG+AGG + chr7_2:84600690-84600709 None:intergenic 40.0%
GTTAGGTGAAGGCAACAAAA+AGG - chr7_2:84600860-84600879 Msa1084320:intron 40.0%
AGGCAACAAAAAGGTCTGTT+TGG - chr7_2:84600869-84600888 Msa1084320:intron 40.0%
GCTTCTTTCAGGCAAAAGTT+AGG - chr7_2:84600952-84600971 Msa1084320:three_prime_UTR 40.0%
GTGGTAAACATGTTACTCAC+AGG - chr7_2:84601006-84601025 Msa1084320:exon 40.0%
TTGCCAATCTTCCAATCTTG+CGG + chr7_2:84601043-84601062 None:intergenic 40.0%
CTCATGTGTTCAGAAGACTT+GGG - chr7_2:84601120-84601139 Msa1084320:CDS 40.0%
! CGTCTATTTCTCTCACTAGA+AGG + chr7_2:84601167-84601186 None:intergenic 40.0%
!!! TCTCTCTTCGTGCTACTTTT+TGG + chr7_2:84601354-84601373 None:intergenic 40.0%
AGTAGCACGAAGAGAGATTA+TGG - chr7_2:84601357-84601376 Msa1084320:CDS 40.0%
GTAGAAACTCTACTTCTTGG+AGG + chr7_2:84601402-84601421 None:intergenic 40.0%
TTCTACAGATTATGGCTCTC+AGG - chr7_2:84601416-84601435 Msa1084320:CDS 40.0%
ATAAGATGGACGTCTTTGAG+AGG + chr7_2:84601445-84601464 None:intergenic 40.0%
GTGATGATCGAAGACTTGAA+AGG - chr7_2:84601553-84601572 Msa1084320:CDS 40.0%
AGATAGTGTGTCATAATCGC+GGG + chr7_2:84601622-84601641 None:intergenic 40.0%
CAGATAGTGTGTCATAATCG+CGG + chr7_2:84601623-84601642 None:intergenic 40.0%
CGTTTAGACTATGACTATGG+AGG - chr7_2:84601816-84601835 Msa1084320:intron 40.0%
ACCATAAGCCTCTCTATATC+GGG + chr7_2:84601850-84601869 None:intergenic 40.0%
CACCATAAGCCTCTCTATAT+CGG + chr7_2:84601851-84601870 None:intergenic 40.0%
ATAGAGAGGCTTATGGTGAT+AGG - chr7_2:84601853-84601872 Msa1084320:intron 40.0%
AAAGAACAACAGGATCAGGT+TGG + chr7_2:84601912-84601931 None:intergenic 40.0%
TAGCAAAGAACAACAGGATC+AGG + chr7_2:84601916-84601935 None:intergenic 40.0%
TATTCACCTCTGCCATAACT+CGG + chr7_2:84602054-84602073 None:intergenic 40.0%
GGCATCTACTCATCAAGTTA+TGG - chr7_2:84602180-84602199 Msa1084320:intron 40.0%
TCGTCCATGTATTCTAGTAG+GGG - chr7_2:84602341-84602360 Msa1084320:intron 40.0%
CATACCCCTACTAGAATACA+TGG + chr7_2:84602348-84602367 None:intergenic 40.0%
GGTAGTAGCAGTTATATGAG+TGG - chr7_2:84602371-84602390 Msa1084320:intron 40.0%
AGCAGTTATATGAGTGGTAG+CGG - chr7_2:84602377-84602396 Msa1084320:intron 40.0%
TTTGATTCATCCGCTCTCTG+TGG - chr7_2:84597489-84597508 Msa1084320:three_prime_UTR 45.0%
! GAACCTCTTTTCACCGCTTT+CGG + chr7_2:84597715-84597734 None:intergenic 45.0%
! TTCTGGATAGGTTCAGGTTC+AGG + chr7_2:84597796-84597815 None:intergenic 45.0%
TGTTTCCTGCGATCATGGAT+TGG - chr7_2:84598247-84598266 Msa1084320:intron 45.0%
!!! TGATGGTTTTGGGAGACTAC+TGG - chr7_2:84598294-84598313 Msa1084320:intron 45.0%
TCATCACCAACATACTCCTC+AGG + chr7_2:84598810-84598829 None:intergenic 45.0%
GAGGGAAATTGAACAAGACG+AGG - chr7_2:84598839-84598858 Msa1084320:three_prime_UTR 45.0%
AATTGAACAAGACGAGGGTC+AGG - chr7_2:84598845-84598864 Msa1084320:three_prime_UTR 45.0%
GGAAGAACCTGAAGAGAATG+TGG - chr7_2:84598887-84598906 Msa1084320:three_prime_UTR 45.0%
TCGTCATCCACATTCTCTTC+AGG + chr7_2:84598897-84598916 None:intergenic 45.0%
AGAGAATGTGGATGACGAAG+AGG - chr7_2:84598899-84598918 Msa1084320:three_prime_UTR 45.0%
GAGAATGTGGATGACGAAGA+GGG - chr7_2:84598900-84598919 Msa1084320:three_prime_UTR 45.0%
! GGTGATGATGATGATGTTGC+TGG - chr7_2:84598978-84598997 Msa1084320:three_prime_UTR 45.0%
TGAGCATCTGGCTGATGTAA+AGG - chr7_2:84599034-84599053 Msa1084320:intron 45.0%
TCTGGCTGATGTAAAGGAAG+AGG - chr7_2:84599040-84599059 Msa1084320:intron 45.0%
AACGCAGAAGCAGAAGGAAT+TGG - chr7_2:84599085-84599104 Msa1084320:intron 45.0%
ATGCTACAGAGCATGATCTG+AGG - chr7_2:84599135-84599154 Msa1084320:three_prime_UTR 45.0%
TACAGAGCATGATCTGAGGA+AGG - chr7_2:84599139-84599158 Msa1084320:three_prime_UTR 45.0%
! CCCTTGTTCCTTTTAGTCTG+AGG + chr7_2:84599212-84599231 None:intergenic 45.0%
ATGTGGTATCACCACATGTC+AGG - chr7_2:84599399-84599418 Msa1084320:intron 45.0%
AGTATCACTGTCCTGACATG+TGG + chr7_2:84599413-84599432 None:intergenic 45.0%
AAAAACAAGGGCCTTGAAGG+TGG + chr7_2:84599550-84599569 None:intergenic 45.0%
TTCGTCTCGTTCAGATGCTA+AGG - chr7_2:84599704-84599723 Msa1084320:intron 45.0%
GGAGTTTGCAAAGGAAACCT+CGG + chr7_2:84599784-84599803 None:intergenic 45.0%
GTGCCATAATATCATCACCC+AGG + chr7_2:84599815-84599834 None:intergenic 45.0%
GGGTGATGATATTATGGCAC+AGG - chr7_2:84599815-84599834 Msa1084320:intron 45.0%
AACAATGGACATGGCAAGGA+TGG + chr7_2:84600186-84600205 None:intergenic 45.0%
ACTGTCTGTAGCTATGTCAG+AGG - chr7_2:84600463-84600482 Msa1084320:intron 45.0%
GTATGATTGTGGCTGACTGT+TGG - chr7_2:84600539-84600558 Msa1084320:three_prime_UTR 45.0%
! CGCTTCTTGTTGCTTCTTTC+AGG - chr7_2:84600941-84600960 Msa1084320:three_prime_UTR 45.0%
TTACCACGAACTTTCGGAAG+AGG + chr7_2:84600993-84601012 None:intergenic 45.0%
!! GACATTTCTAGCCGCAAGAT+TGG - chr7_2:84601029-84601048 Msa1084320:CDS 45.0%
TAGCCGCAAGATTGGAAGAT+TGG - chr7_2:84601037-84601056 Msa1084320:CDS 45.0%
GCAAGATTGGAAGATTGGCA+AGG - chr7_2:84601042-84601061 Msa1084320:CDS 45.0%
AGTCTTCTGAACACATGAGC+AGG + chr7_2:84601119-84601138 None:intergenic 45.0%
GCTCATGTGTTCAGAAGACT+TGG - chr7_2:84601119-84601138 Msa1084320:CDS 45.0%
TCACTAGAAGGTCTAACTGG+TGG + chr7_2:84601155-84601174 None:intergenic 45.0%
CTCTCACTAGAAGGTCTAAC+TGG + chr7_2:84601158-84601177 None:intergenic 45.0%
AATCTCCTGTAGGATCTAGC+TGG + chr7_2:84601233-84601252 None:intergenic 45.0%
AGATCCTACAGGAGATTAGC+AGG - chr7_2:84601236-84601255 Msa1084320:CDS 45.0%
CATACCTGCTAATCTCCTGT+AGG + chr7_2:84601243-84601262 None:intergenic 45.0%
GAAACTCTACTTCTTGGAGG+TGG + chr7_2:84601399-84601418 None:intergenic 45.0%
TACAGATTATGGCTCTCAGG+TGG - chr7_2:84601419-84601438 Msa1084320:CDS 45.0%
TCCTTCGCGATAACTTAGAC+GGG + chr7_2:84601595-84601614 None:intergenic 45.0%
GTCCTTCGCGATAACTTAGA+CGG + chr7_2:84601596-84601615 None:intergenic 45.0%
ATAGTGTGTCATAATCGCGG+GGG + chr7_2:84601620-84601639 None:intergenic 45.0%
GATAGTGTGTCATAATCGCG+GGG + chr7_2:84601621-84601640 None:intergenic 45.0%
CGCGATTATGACACACTATC+TGG - chr7_2:84601621-84601640 Msa1084320:CDS 45.0%
TCCCGATATAGAGAGGCTTA+TGG - chr7_2:84601846-84601865 Msa1084320:intron 45.0%
ACTGCATGAACGTTGTTTGG+AGG + chr7_2:84601886-84601905 None:intergenic 45.0%
AGGACTGCATGAACGTTGTT+TGG + chr7_2:84601889-84601908 None:intergenic 45.0%
TGTTGTGTATCAGGCTCTCT+TGG - chr7_2:84602144-84602163 Msa1084320:intron 45.0%
GGTGGTGATTACTTATCTCG+TGG - chr7_2:84602201-84602220 Msa1084320:intron 45.0%
ATTCTGCTGGTGGTTTAGGT+TGG - chr7_2:84602305-84602324 Msa1084320:intron 45.0%
!! AGTTATATGAGTGGTAGCGG+TGG - chr7_2:84602380-84602399 Msa1084320:intron 45.0%
ATCTTCGACGTCATCCCATT+GGG + chr7_2:84602488-84602507 None:intergenic 45.0%
AATCTTCGACGTCATCCCAT+TGG + chr7_2:84602489-84602508 None:intergenic 45.0%
!! TCTTCAAAATGACGGGCATC+AGG + chr7_2:84602602-84602621 None:intergenic 45.0%
CTTTCCAAATGAACAGAGCC+AGG + chr7_2:84602811-84602830 None:intergenic 45.0%
!! TTATAGTATTTATAAAATTA+GGG + chr7_2:84598642-84598661 None:intergenic 5.0%
!! ATTATAGTATTTATAAAATT+AGG + chr7_2:84598643-84598662 None:intergenic 5.0%
AGCGGTGAAAAGAGGTTCTG+CGG - chr7_2:84597717-84597736 Msa1084320:three_prime_UTR 50.0%
TTCTGCGGCAAAGAAAGCCA+AGG - chr7_2:84597732-84597751 Msa1084320:three_prime_UTR 50.0%
TCATGTTCTTGATGCTGCGG+TGG - chr7_2:84597828-84597847 Msa1084320:intron 50.0%
AGTGCCTAATGGTGTAGCTC+TGG - chr7_2:84597870-84597889 Msa1084320:intron 50.0%
TCCACCAGAGCTACACCATT+AGG + chr7_2:84597877-84597896 None:intergenic 50.0%
TCCATGATCGCAGGAAACAG+CGG + chr7_2:84598246-84598265 None:intergenic 50.0%
!! CGATCATGGATTGGCAACGT+TGG - chr7_2:84598256-84598275 Msa1084320:intron 50.0%
TTCCAAAGTACACCAAGGGC+TGG + chr7_2:84598364-84598383 None:intergenic 50.0%
!!! CGAGAGTGTTTTGATCGGGA+TGG - chr7_2:84598674-84598693 Msa1084320:intron 50.0%
TCAGGAGATCGAAGGTGAAG+TGG - chr7_2:84598863-84598882 Msa1084320:three_prime_UTR 50.0%
GATGACGAAGAGGGTGATAC+AGG - chr7_2:84598909-84598928 Msa1084320:three_prime_UTR 50.0%
AGAGGGTGATACAGGTGATG+AGG - chr7_2:84598917-84598936 Msa1084320:three_prime_UTR 50.0%
! TGATGATGAGCATGCCAGTG+AGG - chr7_2:84599001-84599020 Msa1084320:three_prime_UTR 50.0%
AACGGAAACGCAGAAGCAGA+AGG - chr7_2:84599079-84599098 Msa1084320:intron 50.0%
! ATTTGTTGGGGGCCTAGACA+AGG - chr7_2:84599112-84599131 Msa1084320:intron 50.0%
GCTCTGTAGCATCCTTGTCT+AGG + chr7_2:84599127-84599146 None:intergenic 50.0%
ATTCAACGTCGTCCTGGCTT+CGG + chr7_2:84599189-84599208 None:intergenic 50.0%
TCTATTTCGTGCCGCCTTCA+AGG - chr7_2:84599493-84599512 Msa1084320:three_prime_UTR 50.0%
AAGCATTACTCGGGCCTTGA+AGG + chr7_2:84599510-84599529 None:intergenic 50.0%
!! TGGAGTTGATAAACCTGCCG+AGG - chr7_2:84599764-84599783 Msa1084320:intron 50.0%
TTTGCAAAGGAAACCTCGGC+AGG + chr7_2:84599780-84599799 None:intergenic 50.0%
TCAGGCCCTTGACAAAAGCA+AGG + chr7_2:84599861-84599880 None:intergenic 50.0%
TCGTTTGGGAATTGGGCCAT+CGG - chr7_2:84599922-84599941 Msa1084320:intron 50.0%
GTGGCTGACTGTTGGACATA+TGG - chr7_2:84600547-84600566 Msa1084320:three_prime_UTR 50.0%
!! GAGCTTGCTAAGAACATGCC+AGG - chr7_2:84600753-84600772 Msa1084320:three_prime_UTR 50.0%
TAATTCTTCCTGCGAGCACC+TGG + chr7_2:84600774-84600793 None:intergenic 50.0%
GGTGCTCGCAGGAAGAATTA+TGG - chr7_2:84600774-84600793 Msa1084320:intron 50.0%
!! CTGAGAGCATTACCAGTGCA+GGG - chr7_2:84600838-84600857 Msa1084320:intron 50.0%
AGCATTACCAGTGCAGGGTT+AGG - chr7_2:84600843-84600862 Msa1084320:intron 50.0%
AGACCTCTTCCGAAAGTTCG+TGG - chr7_2:84600987-84601006 Msa1084320:three_prime_UTR 50.0%
GAGAGATTATGGTCGACCTG+TGG - chr7_2:84601368-84601387 Msa1084320:CDS 50.0%
ACGTATCCCTATGCAGGTCA+GGG + chr7_2:84601497-84601516 None:intergenic 50.0%
TACGAGACGTATCCCTATGC+AGG + chr7_2:84601503-84601522 None:intergenic 50.0%
ATACGTCTCGTACTGCACCA+AGG - chr7_2:84601511-84601530 Msa1084320:CDS 50.0%
TCATCCAGATAACCCCTCCT+TGG + chr7_2:84601531-84601550 None:intergenic 50.0%
AGGAGGGGTTATCTGGATGA+TGG - chr7_2:84601531-84601550 Msa1084320:CDS 50.0%
CCTTCGCGATAACTTAGACG+GGG + chr7_2:84601594-84601613 None:intergenic 50.0%
GAAACGTCCTTATGCTGCCA+TGG - chr7_2:84601647-84601666 Msa1084320:intron 50.0%
GACTATGACTATGGAGGCAG+TGG - chr7_2:84601822-84601841 Msa1084320:intron 50.0%
CAGTGGTTCCCGATATAGAG+AGG - chr7_2:84601839-84601858 Msa1084320:intron 50.0%
!! GAACAACAGGATCAGGTTGG+AGG + chr7_2:84601909-84601928 None:intergenic 50.0%
AGTCGACAGGAACCGAGTTA+TGG - chr7_2:84602039-84602058 Msa1084320:intron 50.0%
TGTGTATCAGGCTCTCTTGG+TGG - chr7_2:84602147-84602166 Msa1084320:intron 50.0%
! GCTCTCTTGGTGGTAGTGAT+GGG - chr7_2:84602157-84602176 Msa1084320:intron 50.0%
! CTCTCTTGGTGGTAGTGATG+GGG - chr7_2:84602158-84602177 Msa1084320:intron 50.0%
! TCTCTTGGTGGTAGTGATGG+GGG - chr7_2:84602159-84602178 Msa1084320:intron 50.0%
!! TATATGAGTGGTAGCGGTGG+TGG - chr7_2:84602383-84602402 Msa1084320:intron 50.0%
AAGATTGCAGACCTGGTCAC+CGG - chr7_2:84602503-84602522 Msa1084320:CDS 50.0%
AGACAAATTCACCGGTGACC+AGG + chr7_2:84602517-84602536 None:intergenic 50.0%
!! AGCTCCTGGCTCTGTTCATT+TGG - chr7_2:84602804-84602823 Msa1084320:five_prime_UTR 50.0%
CCAAACCATGCCTCCGAAAG+CGG - chr7_2:84597699-84597718 Msa1084320:three_prime_UTR 55.0%
TTTCACCGCTTTCGGAGGCA+TGG + chr7_2:84597707-84597726 None:intergenic 55.0%
! CCTCTTTTCACCGCTTTCGG+AGG + chr7_2:84597712-84597731 None:intergenic 55.0%
CCTCCGAAAGCGGTGAAAAG+AGG - chr7_2:84597709-84597728 Msa1084320:three_prime_UTR 55.0%
TGTTCTTGATGCTGCGGTGG+AGG - chr7_2:84597831-84597850 Msa1084320:intron 55.0%
!! GCCTAATGGTGTAGCTCTGG+TGG - chr7_2:84597873-84597892 Msa1084320:intron 55.0%
! ACCGCTGTTTCCTGCGATCA+TGG - chr7_2:84598242-84598261 Msa1084320:intron 55.0%
CGTTGCCAATCCATGATCGC+AGG + chr7_2:84598255-84598274 None:intergenic 55.0%
TGACATGTTCCACCAGCCCT+TGG - chr7_2:84598349-84598368 Msa1084320:three_prime_UTR 55.0%
CAAAGTACACCAAGGGCTGG+TGG + chr7_2:84598361-84598380 None:intergenic 55.0%
! CACCAGCCCTTGGTGTACTT+TGG - chr7_2:84598359-84598378 Msa1084320:three_prime_UTR 55.0%
TCTCATGTGATGCGGGATGC+TGG - chr7_2:84598594-84598613 Msa1084320:intron 55.0%
GGAGATCGAAGGTGAAGTGG+AGG - chr7_2:84598866-84598885 Msa1084320:three_prime_UTR 55.0%
CTCATGCACGTTCTCCTCAC+TGG + chr7_2:84599018-84599037 None:intergenic 55.0%
GGAGAACGTGCATGAGCATC+TGG - chr7_2:84599022-84599041 Msa1084320:intron 55.0%
TTGGGGAGATTACCGAAGCC+AGG - chr7_2:84599174-84599193 Msa1084320:three_prime_UTR 55.0%
CTGAGGATTCAACGTCGTCC+TGG + chr7_2:84599195-84599214 None:intergenic 55.0%
CATTACTCGGGCCTTGAAGG+CGG + chr7_2:84599507-84599526 None:intergenic 55.0%
! ACCTAGTCTACTCTGGAGGC+TGG - chr7_2:84600104-84600123 Msa1084320:intron 55.0%
TCCAGCCTCCAGAGTAGACT+AGG + chr7_2:84600108-84600127 None:intergenic 55.0%
!! GCTGAGAGCATTACCAGTGC+AGG - chr7_2:84600837-84600856 Msa1084320:intron 55.0%
ACCAGTGCAGGGTTAGGTGA+AGG - chr7_2:84600849-84600868 Msa1084320:intron 55.0%
! ACATGAGCAGGTCGACTCTG+TGG + chr7_2:84601107-84601126 None:intergenic 55.0%
!! CTTACAGGCATCGACGTGAC+AGG + chr7_2:84601191-84601210 None:intergenic 55.0%
CGTCGATGCCTGTAAGAGCT+AGG - chr7_2:84601195-84601214 Msa1084320:CDS 55.0%
GTAGGATCTAGCTGGAGGAG+AGG + chr7_2:84601225-84601244 None:intergenic 55.0%
CTCCTCCAGCTAGATCCTAC+AGG - chr7_2:84601225-84601244 Msa1084320:CDS 55.0%
CTCCTGTAGGATCTAGCTGG+AGG + chr7_2:84601230-84601249 None:intergenic 55.0%
GATTATCCAGCCCGTGACTC+TGG - chr7_2:84601468-84601487 Msa1084320:CDS 55.0%
TGGCTACCCTGACCTGCATA+GGG - chr7_2:84601488-84601507 Msa1084320:CDS 55.0%
GACGTATCCCTATGCAGGTC+AGG + chr7_2:84601498-84601517 None:intergenic 55.0%
GTCTCGTACTGCACCAAGGA+GGG - chr7_2:84601515-84601534 Msa1084320:CDS 55.0%
TCTCGTACTGCACCAAGGAG+GGG - chr7_2:84601516-84601535 Msa1084320:CDS 55.0%
TGCACCAAGGAGGGGTTATC+TGG - chr7_2:84601524-84601543 Msa1084320:CDS 55.0%
CGATAACTTAGACGGGGAGG+TGG + chr7_2:84601588-84601607 None:intergenic 55.0%
TCGCGATAACTTAGACGGGG+AGG + chr7_2:84601591-84601610 None:intergenic 55.0%
CCCCGTCTAAGTTATCGCGA+AGG - chr7_2:84601591-84601610 Msa1084320:CDS 55.0%
TCTCCACGGTATGCTGATGC+TGG - chr7_2:84601774-84601793 Msa1084320:intron 55.0%
TGGGGCATATAGCAGTCGAC+AGG - chr7_2:84602026-84602045 Msa1084320:intron 55.0%
CAGGAACCGAGTTATGGCAG+AGG - chr7_2:84602045-84602064 Msa1084320:intron 55.0%
! GGCTCTCTTGGTGGTAGTGA+TGG - chr7_2:84602156-84602175 Msa1084320:intron 55.0%
!! CTGCTGGTGGTTTAGGTTGG+TGG - chr7_2:84602308-84602327 Msa1084320:intron 55.0%
GACGTCGAAGATTGCAGACC+TGG - chr7_2:84602496-84602515 Msa1084320:CDS 55.0%
! TGTAACAGGCTGGCTGCTGT+TGG - chr7_2:84602550-84602569 Msa1084320:CDS 55.0%
! CCGCTTTCGGAGGCATGGTT+TGG + chr7_2:84597702-84597721 None:intergenic 60.0%
GACGAGGGTCAGGAGATCGA+AGG - chr7_2:84598855-84598874 Msa1084320:three_prime_UTR 60.0%
AGAACATGCCAGGTGCTCGC+AGG - chr7_2:84600763-84600782 Msa1084320:intron 60.0%
TGGTACGCATGCTGCTGCTG+TGG - chr7_2:84600809-84600828 Msa1084320:intron 60.0%
GCCTTCACCTAACCCTGCAC+TGG + chr7_2:84600853-84600872 None:intergenic 60.0%
GGTGCAGGTCGACTACGTGA+AGG + chr7_2:84601068-84601087 None:intergenic 60.0%
TGTGGTGCAGGTCGACTACG+TGG + chr7_2:84601089-84601108 None:intergenic 60.0%
!! GAGGCTGGCCTAGCTCTTAC+AGG + chr7_2:84601206-84601225 None:intergenic 60.0%
GATCTAGCTGGAGGAGAGGC+TGG + chr7_2:84601221-84601240 None:intergenic 60.0%
CTTGGAGGTGGCAGATCCAC+AGG + chr7_2:84601387-84601406 None:intergenic 60.0%
GTCAGGGTAGCCAGAGTCAC+GGG + chr7_2:84601481-84601500 None:intergenic 60.0%
GGTCAGGGTAGCCAGAGTCA+CGG + chr7_2:84601482-84601501 None:intergenic 60.0%
CTGGCTACCCTGACCTGCAT+AGG - chr7_2:84601487-84601506 Msa1084320:CDS 60.0%
CGTCTCGTACTGCACCAAGG+AGG - chr7_2:84601514-84601533 Msa1084320:CDS 60.0%
CTTAGACGGGGAGGTGGAGA+AGG + chr7_2:84601582-84601601 None:intergenic 60.0%
GCACCAGCATCAGCATACCG+TGG + chr7_2:84601780-84601799 None:intergenic 60.0%
GCAGGTCGACTACGTGGTGC+AGG + chr7_2:84601083-84601102 None:intergenic 65.0%
! GCAGGTCGACTCTGTGGTGC+AGG + chr7_2:84601101-84601120 None:intergenic 65.0%
AGACGGGGAGGTGGAGAAGG+AGG + chr7_2:84601579-84601598 None:intergenic 65.0%
GGGTAGCCAGAGTCACGGGC+TGG + chr7_2:84601477-84601496 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 84597489 84602884 84597489 ID=Msa1084320;Name=Msa1084320
chr7_2 mRNA 84597489 84602884 84597489 ID=Msa1084320-mRNA-1;Parent=Msa1084320;Name=Msa1084320-mRNA-1;_AED=0.07;_eAED=0.07;_QI=217|1|1|1|0.8|0.72|11|1923|275
chr7_2 exon 84597489 84597815 84597489 ID=Msa1084320-mRNA-1:exon:22683;Parent=Msa1084320-mRNA-1
chr7_2 exon 84597948 84598050 84597948 ID=Msa1084320-mRNA-1:exon:22682;Parent=Msa1084320-mRNA-1
chr7_2 exon 84598143 84598216 84598143 ID=Msa1084320-mRNA-1:exon:22681;Parent=Msa1084320-mRNA-1
chr7_2 exon 84598307 84598413 84598307 ID=Msa1084320-mRNA-1:exon:22680;Parent=Msa1084320-mRNA-1
chr7_2 exon 84598499 84598608 84598499 ID=Msa1084320-mRNA-1:exon:22679;Parent=Msa1084320-mRNA-1
chr7_2 exon 84598705 84599030 84598705 ID=Msa1084320-mRNA-1:exon:22678;Parent=Msa1084320-mRNA-1
chr7_2 exon 84599116 84599410 84599116 ID=Msa1084320-mRNA-1:exon:22677;Parent=Msa1084320-mRNA-1
chr7_2 exon 84599492 84599713 84599492 ID=Msa1084320-mRNA-1:exon:22676;Parent=Msa1084320-mRNA-1
chr7_2 exon 84600537 84600776 84600537 ID=Msa1084320-mRNA-1:exon:22675;Parent=Msa1084320-mRNA-1
chr7_2 exon 84600899 84601652 84600899 ID=Msa1084320-mRNA-1:exon:22674;Parent=Msa1084320-mRNA-1
chr7_2 exon 84602475 84602884 84602475 ID=Msa1084320-mRNA-1:exon:22673;Parent=Msa1084320-mRNA-1
chr7_2 five_prime_UTR 84602668 84602884 84602668 ID=Msa1084320-mRNA-1:five_prime_utr;Parent=Msa1084320-mRNA-1
chr7_2 CDS 84602475 84602667 84602475 ID=Msa1084320-mRNA-1:cds;Parent=Msa1084320-mRNA-1
chr7_2 CDS 84601018 84601652 84601018 ID=Msa1084320-mRNA-1:cds;Parent=Msa1084320-mRNA-1
chr7_2 three_prime_UTR 84600899 84601017 84600899 ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1
chr7_2 three_prime_UTR 84600537 84600776 84600537 ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1
chr7_2 three_prime_UTR 84599492 84599713 84599492 ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1
chr7_2 three_prime_UTR 84599116 84599410 84599116 ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1
chr7_2 three_prime_UTR 84598705 84599030 84598705 ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1
chr7_2 three_prime_UTR 84598499 84598608 84598499 ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1
chr7_2 three_prime_UTR 84598307 84598413 84598307 ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1
chr7_2 three_prime_UTR 84598143 84598216 84598143 ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1
chr7_2 three_prime_UTR 84597948 84598050 84597948 ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1
chr7_2 three_prime_UTR 84597489 84597815 84597489 ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1
Gene Sequence

>Msa1084320

ATGCCTCCGAAAGCGGTGAAAAGAGGTTCTGCGGCAAAGAAAGCCAAGGTTTCTTCAAAAGCCACAACTCAGAATCAACAGCAAGAACCTGAACCTGAACCTATCCAGAATCATGAAGATAATCATGTTCTTGATGCTGCGGTGGAGGAGAATTCTGTTGAAACAGTGCCTAATGGTGTAGCTCTGGTGGAAAACAATGTAGAGGAGGTTAAGGAGTCCACAGATGAATATGAAAAAGATGAACACTTAGATTTTGAGGATAATTATCAGGAGTATGATCCTGAGGAGTATGTTGGTGATGACTATGATGAGAGGGAAATTGAACAAGACGAGGGTCAGGAGATCGAAGGTGAAGTGGAGGAAGAACCTGAAGAGAATGTGGATGACGAAGAGGGTGATACAGGTGATGAGGAAGTTGAAGAAGTTGAATATGTTTATGAAGAAGTCGAGGGTGATGATGATGATGTTGCTGGTGATGATGAGCATGCCAGTGAGGAGAACGTGCATGAGCATCTGGCTGATGTAAAGGAAGAGGAACAAGTTGAAGTTAGAACGGAAACGCAGAAGCAGAAGGAATTGGAAGTATTTGTTGGGGGCCTAGACAAGGATGCTACAGAGCATGATCTGAGGAAGGTTTTCAGTAAAGTTGGGGAGATTACCGAAGCCAGGACGACGTTGAATCCTCAGACTAAAAGGAACAAGGGATTTGCTTTATTGCGTTTCGAAACTGTTGAACAAGTGAAAAGAGCATTGACAGAGCTAAAAAATCCAGTGGTAATCTTTGATCTTCTCATGGTTAAAGCAGATTTACAATTTGCAGTGTCTTAA

Protein sequence

>Msa1084320

MPPKAVKRGSAAKKAKVSSKATTQNQQQEPEPEPIQNHEDNHVLDAAVEENSVETVPNGVALVENNVEEVKESTDEYEKDEHLDFEDNYQEYDPEEYVGDDYDEREIEQDEGQEIEGEVEEEPEENVDDEEGDTGDEEVEEVEYVYEEVEGDDDDVAGDDEHASEENVHEHLADVKEEEQVEVRTETQKQKELEVFVGGLDKDATEHDLRKVFSKVGEITEARTTLNPQTKRNKGFALLRFETVEQVKRALTELKNPVVIFDLLMVKADLQFAVS*