Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1084320 | XP_003624278.2 | 88.846 | 260 | 28 | 1 | 1 | 259 | 1 | 260 | 3.34e-114 | 356 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1084320 | G7KTC8 | 88.846 | 260 | 28 | 1 | 1 | 259 | 1 | 260 | 1.59e-114 | 356 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0687230 | Msa1084320 | 0.806945 | 6.427212e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1084320 | MtrunA17_Chr7g0250221 | 88.846 | 260 | 28 | 1 | 1 | 259 | 1 | 260 | 3.48e-118 | 356 |
Msa1084320 | MtrunA17_Chr8g0335981 | 48.276 | 290 | 110 | 7 | 1 | 259 | 1 | 281 | 2.57e-51 | 179 |
Msa1084320 | MtrunA17_Chr8g0372111 | 51.429 | 70 | 34 | 0 | 190 | 259 | 415 | 484 | 6.17e-19 | 86.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1084320 | AT2G44710.2 | 58.163 | 98 | 41 | 0 | 162 | 259 | 183 | 280 | 1.39e-27 | 112 |
Msa1084320 | AT2G44710.1 | 58.163 | 98 | 41 | 0 | 162 | 259 | 183 | 280 | 1.39e-27 | 112 |
Msa1084320 | AT2G44710.4 | 58.163 | 98 | 41 | 0 | 162 | 259 | 98 | 195 | 1.73e-27 | 112 |
Find 248 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAATTTCAATTCAATATTAT+TGG | 0.131999 | 7_2:-84602765 | Msa1084320:five_prime_UTR |
TGACTACAATTTCAGATTAA+TGG | 0.152218 | 7_2:-84600981 | Msa1084320:three_prime_UTR |
TTGAATTGAAATTATAAAAT+TGG | 0.178896 | 7_2:+84602774 | None:intergenic |
TTTAATAAGAGAGAGAAATT+TGG | 0.195069 | 7_2:+84602816 | None:intergenic |
CATGATTATCTTCATGATTC+TGG | 0.204003 | 7_2:+84602541 | None:intergenic |
CGAGCTCTTCTTAAGAAATA+TGG | 0.216036 | 7_2:-84599637 | Msa1084320:three_prime_UTR |
AGTAGAGTTTCTACAGATTA+TGG | 0.227585 | 7_2:-84598943 | Msa1084320:three_prime_UTR |
GAAAATAAGGTCCATGGATT+TGG | 0.230006 | 7_2:-84597521 | Msa1084320:three_prime_UTR |
CTCTTATTAAATTCAGAATT+AGG | 0.252282 | 7_2:-84602804 | Msa1084320:five_prime_UTR |
AAGGAGAAATTGAAACATTA+TGG | 0.254237 | 7_2:-84600751 | Msa1084320:three_prime_UTR |
TGTCTTCTGCAATCGCTTAT+AGG | 0.267797 | 7_2:+84600621 | None:intergenic |
CGCGATTATGACACACTATC+TGG | 0.278511 | 7_2:-84598730 | Msa1084320:three_prime_UTR |
TTAATAAGAGAGAGAAATTT+GGG | 0.278903 | 7_2:+84602817 | None:intergenic |
CACCATAAGCCTCTCTATAT+CGG | 0.288642 | 7_2:+84598503 | None:intergenic |
TGCTGAGTTATAGACTGATT+TGG | 0.315723 | 7_2:-84597720 | Msa1084320:three_prime_UTR |
AGCTCCTGGCTCTGTTCATT+TGG | 0.317727 | 7_2:-84597547 | Msa1084320:three_prime_UTR |
TGACCTGGGTGATGATATTA+TGG | 0.320374 | 7_2:-84600542 | Msa1084320:three_prime_UTR |
CCGCTTTCGGAGGCATGGTT+TGG | 0.321637 | 7_2:+84602652 | None:intergenic |
CGTTGAATCCTCAGACTAAA+AGG | 0.324292 | 7_2:-84601150 | Msa1084320:CDS |
TCGTCATCCACATTCTCTTC+AGG | 0.324779 | 7_2:+84601457 | None:intergenic |
TACTTCAATCCAAGATATCT+TGG | 0.325649 | 7_2:-84597676 | Msa1084320:three_prime_UTR |
GTTCATTTGGAAAGAAAATA+AGG | 0.328933 | 7_2:-84597534 | Msa1084320:three_prime_UTR |
TTCTGGATAGGTTCAGGTTC+AGG | 0.331908 | 7_2:+84602558 | None:intergenic |
GCTCTCTTGGTGGTAGTGAT+GGG | 0.337411 | 7_2:-84598194 | Msa1084320:three_prime_UTR |
GCTTCTTTCAGGCAAAAGTT+AGG | 0.339127 | 7_2:-84599399 | Msa1084320:intron |
TGCACCAAGGAGGGGTTATC+TGG | 0.341073 | 7_2:-84598827 | Msa1084320:three_prime_UTR |
GGCTCTCTTGGTGGTAGTGA+TGG | 0.343398 | 7_2:-84598195 | Msa1084320:three_prime_UTR |
GGTTAATTCTAAATGTAAAA+AGG | 0.344009 | 7_2:-84597615 | Msa1084320:three_prime_UTR |
CAACACAAGAAAGTGTTATT+CGG | 0.345689 | 7_2:+84602687 | None:intergenic |
TTGATTTACTGCCTCCTTCA+TGG | 0.354240 | 7_2:-84599675 | Msa1084320:three_prime_UTR |
TCTGTAGAAACTCTACTTCT+TGG | 0.355207 | 7_2:+84598949 | None:intergenic |
CATTTGCAAGACATGGAAAA+AGG | 0.359691 | 7_2:-84600904 | Msa1084320:three_prime_UTR |
CAATTCAATATTATTGGATT+CGG | 0.368607 | 7_2:-84602759 | Msa1084320:five_prime_UTR |
GAGGCTGGCCTAGCTCTTAC+AGG | 0.370811 | 7_2:+84599148 | None:intergenic |
TCTCGTTTAGACTATGACTA+TGG | 0.372013 | 7_2:-84598538 | Msa1084320:three_prime_UTR |
AATTATGGATTTGTTACGTT+TGG | 0.373518 | 7_2:-84599562 | Msa1084320:three_prime_UTR |
TCATGATTCTGGATAGGTTC+AGG | 0.375138 | 7_2:+84602552 | None:intergenic |
CTCTCACTAGAAGGTCTAAC+TGG | 0.376141 | 7_2:+84599196 | None:intergenic |
CGAATAACACTTTCTTGTGT+TGG | 0.376301 | 7_2:-84602686 | Msa1084320:five_prime_UTR |
ATCATCACCCAGGTCAATAA+AGG | 0.378170 | 7_2:+84600549 | None:intergenic |
GGTGCTCGCAGGAAGAATTA+TGG | 0.380990 | 7_2:-84599577 | Msa1084320:three_prime_UTR |
TAGCCGCAAGATTGGAAGAT+TGG | 0.381965 | 7_2:-84599314 | Msa1084320:three_prime_UTR |
GACATTTCTAGCCGCAAGAT+TGG | 0.387515 | 7_2:-84599322 | Msa1084320:three_prime_UTR |
AAGGAATTGGAAGTATTTGT+TGG | 0.389201 | 7_2:-84601253 | Msa1084320:CDS |
TGCAAACTCCTTTATTGACC+TGG | 0.389228 | 7_2:-84600557 | Msa1084320:three_prime_UTR |
ATTCGTCCATGTATTCTAGT+AGG | 0.390078 | 7_2:-84598012 | Msa1084320:three_prime_UTR |
GACGTATCCCTATGCAGGTC+AGG | 0.397751 | 7_2:+84598856 | None:intergenic |
AGTAGCACGAAGAGAGATTA+TGG | 0.398209 | 7_2:-84598994 | Msa1084320:three_prime_UTR |
AGACAATGTAGAGGAGGTTA+AGG | 0.405956 | 7_2:-84601632 | Msa1084320:CDS |
TCTTCAAAATGACGGGCATC+AGG | 0.414427 | 7_2:+84597752 | None:intergenic |
CGTCTATTTCTCTCACTAGA+AGG | 0.416231 | 7_2:+84599187 | None:intergenic |
AGGAATTGGAAGTATTTGTT+GGG | 0.417287 | 7_2:-84601252 | Msa1084320:CDS |
TTGAAGTTATTCAATTTATG+AGG | 0.418486 | 7_2:-84597636 | Msa1084320:three_prime_UTR |
GAGCTCTTCTTAAGAAATAT+GGG | 0.418982 | 7_2:-84599636 | Msa1084320:three_prime_UTR |
GAATAACACTTTCTTGTGTT+GGG | 0.419405 | 7_2:-84602685 | Msa1084320:five_prime_UTR |
AGGCTTGAAAGATCTAGTTT+AGG | 0.420838 | 7_2:-84598390 | Msa1084320:three_prime_UTR |
AGAGAAGATCCAAGATATCT+TGG | 0.421729 | 7_2:+84597667 | None:intergenic |
ATTCAACGTCGTCCTGGCTT+CGG | 0.425982 | 7_2:+84601165 | None:intergenic |
TGTTGTGTATCAGGCTCTCT+TGG | 0.432447 | 7_2:-84598207 | Msa1084320:intron |
CTTTCCAAATGAACAGAGCC+AGG | 0.433942 | 7_2:+84597543 | None:intergenic |
TCCACCAGAGCTACACCATT+AGG | 0.440344 | 7_2:+84602477 | None:intergenic |
ACATGTTTACCACGAACTTT+CGG | 0.441103 | 7_2:+84599355 | None:intergenic |
TTCTACAGATTATGGCTCTC+AGG | 0.441928 | 7_2:-84598935 | Msa1084320:three_prime_UTR |
CTGCTGGTGGTTTAGGTTGG+TGG | 0.442382 | 7_2:-84598043 | Msa1084320:intron |
AACGCAGAAGCAGAAGGAAT+TGG | 0.443107 | 7_2:-84601266 | Msa1084320:CDS |
GATCTAGCTGGAGGAGAGGC+TGG | 0.447370 | 7_2:+84599133 | None:intergenic |
CTTCTTTCAGGCAAAAGTTA+GGG | 0.447493 | 7_2:-84599398 | Msa1084320:intron |
AATTGAACAAGACGAGGGTC+AGG | 0.452315 | 7_2:-84601506 | Msa1084320:CDS |
TGATTTACTGCCTCCTTCAT+GGG | 0.453875 | 7_2:-84599674 | Msa1084320:three_prime_UTR |
GGAGAACGTGCATGAGCATC+TGG | 0.454735 | 7_2:-84601329 | Msa1084320:CDS |
GTTAGGTGAAGGCAACAAAA+AGG | 0.457290 | 7_2:-84599491 | Msa1084320:intron |
TTGAAGTAATCCTTGAATAG+TGG | 0.463920 | 7_2:+84597691 | None:intergenic |
GATTATCCAGCCCGTGACTC+TGG | 0.465141 | 7_2:-84598883 | Msa1084320:three_prime_UTR |
GCTCATGTGTTCAGAAGACT+TGG | 0.466194 | 7_2:-84599232 | Msa1084320:three_prime_UTR |
TTTCACCGCTTTCGGAGGCA+TGG | 0.469047 | 7_2:+84602647 | None:intergenic |
AGATCCTACAGGAGATTAGC+AGG | 0.472819 | 7_2:-84599115 | Msa1084320:intron |
TTCGTCCATGTATTCTAGTA+GGG | 0.474534 | 7_2:-84598011 | Msa1084320:three_prime_UTR |
CTCTCTTGGTGGTAGTGATG+GGG | 0.474594 | 7_2:-84598193 | Msa1084320:three_prime_UTR |
AGTCTAAACGAGATCTTGAT+TGG | 0.475930 | 7_2:+84598548 | None:intergenic |
TTATGGAGTTGAAAGTTTCA+AGG | 0.477289 | 7_2:-84600734 | Msa1084320:three_prime_UTR |
TCCCGATATAGAGAGGCTTA+TGG | 0.477978 | 7_2:-84598505 | Msa1084320:three_prime_UTR |
CTCATGCACGTTCTCCTCAC+TGG | 0.478824 | 7_2:+84601336 | None:intergenic |
ACCATAAGCCTCTCTATATC+GGG | 0.480367 | 7_2:+84598504 | None:intergenic |
CTTAGACGGGGAGGTGGAGA+AGG | 0.484673 | 7_2:+84598772 | None:intergenic |
TAATTCTTCCTGCGAGCACC+TGG | 0.485879 | 7_2:+84599580 | None:intergenic |
TATATGAGTGGTAGCGGTGG+TGG | 0.486870 | 7_2:-84597968 | Msa1084320:three_prime_UTR |
GCTCTGTAGCATCCTTGTCT+AGG | 0.487388 | 7_2:+84601227 | None:intergenic |
ATAGAGAGGCTTATGGTGAT+AGG | 0.489079 | 7_2:-84598498 | Msa1084320:intron |
TTGCTGTTGATTCTGAGTTG+TGG | 0.490523 | 7_2:+84602584 | None:intergenic |
GACTATGACTATGGAGGCAG+TGG | 0.491996 | 7_2:-84598529 | Msa1084320:three_prime_UTR |
GGCATCTACTCATCAAGTTA+TGG | 0.493108 | 7_2:-84598171 | Msa1084320:three_prime_UTR |
CGATAACTTAGACGGGGAGG+TGG | 0.500123 | 7_2:+84598766 | None:intergenic |
GCAGGTCGACTCTGTGGTGC+AGG | 0.502241 | 7_2:+84599253 | None:intergenic |
CTTGGAGGTGGCAGATCCAC+AGG | 0.502795 | 7_2:+84598967 | None:intergenic |
GGATCTAGATCTTATTATTG+AGG | 0.505400 | 7_2:-84597947 | Msa1084320:intron |
ATGTGGTATCACCACATGTC+AGG | 0.506024 | 7_2:-84600952 | Msa1084320:three_prime_UTR |
AGTCGACAGGAACCGAGTTA+TGG | 0.506806 | 7_2:-84598312 | Msa1084320:three_prime_UTR |
AGATAGTGTGTCATAATCGC+GGG | 0.507246 | 7_2:+84598732 | None:intergenic |
GGTAATCTTTGATCTTCTCA+TGG | 0.507315 | 7_2:-84601050 | Msa1084320:CDS |
TTCGTCTCGTTCAGATGCTA+AGG | 0.507456 | 7_2:-84600647 | Msa1084320:three_prime_UTR |
CTGGCTACCCTGACCTGCAT+AGG | 0.509292 | 7_2:-84598864 | Msa1084320:three_prime_UTR |
CTGAGGATTCAACGTCGTCC+TGG | 0.509458 | 7_2:+84601159 | None:intergenic |
GGTGATGATGATGATGTTGC+TGG | 0.509554 | 7_2:-84601373 | Msa1084320:CDS |
AGCATTACCAGTGCAGGGTT+AGG | 0.511607 | 7_2:-84599508 | Msa1084320:three_prime_UTR |
AGACCTCTTCCGAAAGTTCG+TGG | 0.513973 | 7_2:-84599364 | Msa1084320:three_prime_UTR |
AGATCTAGTTTAGGATATAG+TGG | 0.514518 | 7_2:-84598381 | Msa1084320:three_prime_UTR |
GTCAGGGTAGCCAGAGTCAC+GGG | 0.514833 | 7_2:+84598873 | None:intergenic |
TGTAACAGGCTGGCTGCTGT+TGG | 0.515451 | 7_2:-84597801 | Msa1084320:intron |
CATACCCCTACTAGAATACA+TGG | 0.515458 | 7_2:+84598006 | None:intergenic |
GCTGAGAGCATTACCAGTGC+AGG | 0.519052 | 7_2:-84599514 | Msa1084320:three_prime_UTR |
TTACCACGAACTTTCGGAAG+AGG | 0.521044 | 7_2:+84599361 | None:intergenic |
GATGACGAAGAGGGTGATAC+AGG | 0.521079 | 7_2:-84601442 | Msa1084320:CDS |
GCAGGTCGACTACGTGGTGC+AGG | 0.522305 | 7_2:+84599271 | None:intergenic |
TGGAAAGAAAATAAGGTCCA+TGG | 0.522332 | 7_2:-84597527 | Msa1084320:three_prime_UTR |
GCTGGATAATCTCTATAAGA+TGG | 0.523576 | 7_2:+84598895 | None:intergenic |
GCAAACTCCTTTATTGACCT+GGG | 0.528469 | 7_2:-84600556 | Msa1084320:three_prime_UTR |
GTAGAAACTCTACTTCTTGG+AGG | 0.530039 | 7_2:+84598952 | None:intergenic |
TCCTTCGCGATAACTTAGAC+GGG | 0.530110 | 7_2:+84598759 | None:intergenic |
TTATCTTCATGATTCTGGAT+AGG | 0.531353 | 7_2:+84602546 | None:intergenic |
CTGAAATTGATGAAGATGAA+AGG | 0.532097 | 7_2:+84602734 | None:intergenic |
CTATCTATTCAAAACTCACA+TGG | 0.532631 | 7_2:-84598345 | Msa1084320:three_prime_UTR |
TCTGTTGAAACAGTGCCTAA+TGG | 0.533400 | 7_2:-84602492 | Msa1084320:CDS |
AGTGCCTAATGGTGTAGCTC+TGG | 0.534979 | 7_2:-84602481 | Msa1084320:CDS |
TGTTCTTGATGCTGCGGTGG+AGG | 0.537046 | 7_2:-84602520 | Msa1084320:CDS |
CGTCGATGCCTGTAAGAGCT+AGG | 0.537152 | 7_2:-84599156 | Msa1084320:three_prime_UTR |
CTCCTCCAGCTAGATCCTAC+AGG | 0.538173 | 7_2:-84599126 | Msa1084320:three_prime_UTR |
CCTCCGAAAGCGGTGAAAAG+AGG | 0.540898 | 7_2:-84602642 | Msa1084320:CDS |
GCCTAATGGTGTAGCTCTGG+TGG | 0.542445 | 7_2:-84602478 | Msa1084320:CDS |
GCCTTCACCTAACCCTGCAC+TGG | 0.542638 | 7_2:+84599501 | None:intergenic |
TCAGGAGATCGAAGGTGAAG+TGG | 0.543807 | 7_2:-84601488 | Msa1084320:CDS |
AGTCTTCTGAACACATGAGC+AGG | 0.544172 | 7_2:+84599235 | None:intergenic |
AATCTCCTGTAGGATCTAGC+TGG | 0.545605 | 7_2:+84599121 | None:intergenic |
TCTCCACGGTATGCTGATGC+TGG | 0.548096 | 7_2:-84598577 | Msa1084320:three_prime_UTR |
TGTGTATCAGGCTCTCTTGG+TGG | 0.548199 | 7_2:-84598204 | Msa1084320:intron |
CATATTTCTTAAGAAGAGCT+CGG | 0.549726 | 7_2:+84599638 | None:intergenic |
AGAACATGCCAGGTGCTCGC+AGG | 0.549789 | 7_2:-84599588 | Msa1084320:three_prime_UTR |
TAGATAACATTTGCAAGACA+TGG | 0.549859 | 7_2:-84600911 | Msa1084320:three_prime_UTR |
GGGTAGCCAGAGTCACGGGC+TGG | 0.551246 | 7_2:+84598877 | None:intergenic |
GAGCTTGCTAAGAACATGCC+AGG | 0.553348 | 7_2:-84599598 | Msa1084320:three_prime_UTR |
GTCAATAAAGGAGTTTGCAA+AGG | 0.555481 | 7_2:+84600561 | None:intergenic |
AGAAGATCAAAGATTACCAC+TGG | 0.555676 | 7_2:+84601055 | None:intergenic |
TTGGGGAGATTACCGAAGCC+AGG | 0.556224 | 7_2:-84601177 | Msa1084320:CDS |
GGGTGATGATATTATGGCAC+AGG | 0.557778 | 7_2:-84600536 | Msa1084320:intron |
TCTCTTGGTGGTAGTGATGG+GGG | 0.560113 | 7_2:-84598192 | Msa1084320:three_prime_UTR |
TGGCTACCCTGACCTGCATA+GGG | 0.560943 | 7_2:-84598863 | Msa1084320:three_prime_UTR |
TCATCCAGATAACCCCTCCT+TGG | 0.561200 | 7_2:+84598823 | None:intergenic |
TACGAGACGTATCCCTATGC+AGG | 0.563411 | 7_2:+84598851 | None:intergenic |
AGGAGCTATCATATAAAACT+AGG | 0.564088 | 7_2:+84597563 | None:intergenic |
AGGAGGGGTTATCTGGATGA+TGG | 0.564427 | 7_2:-84598820 | Msa1084320:three_prime_UTR |
GTGGTAAACATGTTACTCAC+AGG | 0.564528 | 7_2:-84599345 | Msa1084320:three_prime_UTR |
TATCTATTCAAAACTCACAT+GGG | 0.565832 | 7_2:-84598344 | Msa1084320:three_prime_UTR |
TCATCACCAACATACTCCTC+AGG | 0.566571 | 7_2:+84601544 | None:intergenic |
TCTGGCTGATGTAAAGGAAG+AGG | 0.566817 | 7_2:-84601311 | Msa1084320:CDS |
GGTGGTGATTACTTATCTCG+TGG | 0.569411 | 7_2:-84598150 | Msa1084320:three_prime_UTR |
TTTGCAAAGGAAACCTCGGC+AGG | 0.569590 | 7_2:+84600574 | None:intergenic |
GTCTCGTACTGCACCAAGGA+GGG | 0.574387 | 7_2:-84598836 | Msa1084320:three_prime_UTR |
GGAGATCGAAGGTGAAGTGG+AGG | 0.574428 | 7_2:-84601485 | Msa1084320:CDS |
TGAGCATCTGGCTGATGTAA+AGG | 0.575900 | 7_2:-84601317 | Msa1084320:CDS |
CCAAACCATGCCTCCGAAAG+CGG | 0.576396 | 7_2:-84602652 | Msa1084320:exon |
GAAACTCTACTTCTTGGAGG+TGG | 0.577034 | 7_2:+84598955 | None:intergenic |
TACAGATTATGGCTCTCAGG+TGG | 0.577668 | 7_2:-84598932 | Msa1084320:three_prime_UTR |
GGTCAGGGTAGCCAGAGTCA+CGG | 0.577760 | 7_2:+84598872 | None:intergenic |
CTTACAGGCATCGACGTGAC+AGG | 0.580546 | 7_2:+84599163 | None:intergenic |
GTCCTTCGCGATAACTTAGA+CGG | 0.580638 | 7_2:+84598758 | None:intergenic |
AGCAGTTATATGAGTGGTAG+CGG | 0.581735 | 7_2:-84597974 | Msa1084320:three_prime_UTR |
ACCAGTGCAGGGTTAGGTGA+AGG | 0.583452 | 7_2:-84599502 | Msa1084320:three_prime_UTR |
TCCTCAGACTAAAAGGAACA+AGG | 0.583768 | 7_2:-84601143 | Msa1084320:CDS |
GAAACGTCCTTATGCTGCCA+TGG | 0.584363 | 7_2:-84598704 | Msa1084320:intron |
AGACGGGGAGGTGGAGAAGG+AGG | 0.589545 | 7_2:+84598775 | None:intergenic |
CAGATTAATGGCAAACAATG+TGG | 0.592242 | 7_2:-84600969 | Msa1084320:three_prime_UTR |
GATTTGACTATAGTAGAAGA+TGG | 0.595203 | 7_2:-84600712 | Msa1084320:three_prime_UTR |
TTGCCAATCTTCCAATCTTG+CGG | 0.597275 | 7_2:+84599311 | None:intergenic |
GGAATTGGAAGTATTTGTTG+GGG | 0.599965 | 7_2:-84601251 | Msa1084320:CDS |
CATACCTGCTAATCTCCTGT+AGG | 0.600207 | 7_2:+84599111 | None:intergenic |
GGAACAAGTTGAAGTTAGAA+CGG | 0.601115 | 7_2:-84601290 | Msa1084320:CDS |
TGGGGCATATAGCAGTCGAC+AGG | 0.602038 | 7_2:-84598325 | Msa1084320:three_prime_UTR |
TGGAGTTGATAAACCTGCCG+AGG | 0.608661 | 7_2:-84600587 | Msa1084320:three_prime_UTR |
TATTCACCTCTGCCATAACT+CGG | 0.609251 | 7_2:+84598300 | None:intergenic |
TGGTACGCATGCTGCTGCTG+TGG | 0.613596 | 7_2:-84599542 | Msa1084320:three_prime_UTR |
GGAAGAACCTGAAGAGAATG+TGG | 0.615460 | 7_2:-84601464 | Msa1084320:CDS |
AACGGAAACGCAGAAGCAGA+AGG | 0.617608 | 7_2:-84601272 | Msa1084320:CDS |
ACATAATCTTCATCCCATGA+AGG | 0.617754 | 7_2:+84599661 | None:intergenic |
ATATGTTTATGAAGAAGTCG+AGG | 0.618879 | 7_2:-84601395 | Msa1084320:CDS |
GAGAATGTGGATGACGAAGA+GGG | 0.619183 | 7_2:-84601451 | Msa1084320:CDS |
TTCTGCGGCAAAGAAAGCCA+AGG | 0.619637 | 7_2:-84602619 | Msa1084320:CDS |
CTGAGAGCATTACCAGTGCA+GGG | 0.619976 | 7_2:-84599513 | Msa1084320:three_prime_UTR |
CAGATAGTGTGTCATAATCG+CGG | 0.620927 | 7_2:+84598731 | None:intergenic |
ACGTATCCCTATGCAGGTCA+GGG | 0.623320 | 7_2:+84598857 | None:intergenic |
AGAGGGTGATACAGGTGATG+AGG | 0.624317 | 7_2:-84601434 | Msa1084320:CDS |
CCTCAGACTAAAAGGAACAA+GGG | 0.625261 | 7_2:-84601142 | Msa1084320:CDS |
ATCTACTCATCAAGTTATGG+TGG | 0.625887 | 7_2:-84598168 | Msa1084320:three_prime_UTR |
GGAGTTTGCAAAGGAAACCT+CGG | 0.629424 | 7_2:+84600570 | None:intergenic |
TGGTGATGACTATGATGAGA+GGG | 0.632078 | 7_2:-84601530 | Msa1084320:CDS |
CTCATGTGTTCAGAAGACTT+GGG | 0.633447 | 7_2:-84599231 | Msa1084320:three_prime_UTR |
TCACTAGAAGGTCTAACTGG+TGG | 0.635479 | 7_2:+84599199 | None:intergenic |
ATAAGATGGACGTCTTTGAG+AGG | 0.637078 | 7_2:+84598909 | None:intergenic |
GAGAGATTATGGTCGACCTG+TGG | 0.637218 | 7_2:-84598983 | Msa1084320:three_prime_UTR |
TATTCTAGTAGGGGTATGAA+CGG | 0.637498 | 7_2:-84598001 | Msa1084320:three_prime_UTR |
CAGTGGTTCCCGATATAGAG+AGG | 0.638252 | 7_2:-84598512 | Msa1084320:three_prime_UTR |
TATAGCAGACAATGTAGAGG+AGG | 0.642455 | 7_2:-84601638 | Msa1084320:intron |
TCTTATAGCAGACAATGTAG+AGG | 0.643175 | 7_2:-84601641 | Msa1084320:intron |
TTTGATTCATCCGCTCTCTG+TGG | 0.643441 | 7_2:-84602862 | Msa1084320:five_prime_UTR |
TCATGTTCTTGATGCTGCGG+TGG | 0.643800 | 7_2:-84602523 | Msa1084320:CDS |
TACAGAGCATGATCTGAGGA+AGG | 0.644051 | 7_2:-84601212 | Msa1084320:CDS |
ATATAGAAAACCACAGAGAG+CGG | 0.644388 | 7_2:+84602852 | None:intergenic |
GCAAGATTGGAAGATTGGCA+AGG | 0.644404 | 7_2:-84599309 | Msa1084320:three_prime_UTR |
TCGTCCATGTATTCTAGTAG+GGG | 0.646419 | 7_2:-84598010 | Msa1084320:three_prime_UTR |
CGTTTAGACTATGACTATGG+AGG | 0.646761 | 7_2:-84598535 | Msa1084320:three_prime_UTR |
GAGGGAAATTGAACAAGACG+AGG | 0.648511 | 7_2:-84601512 | Msa1084320:CDS |
GTAGGATCTAGCTGGAGGAG+AGG | 0.648717 | 7_2:+84599129 | None:intergenic |
CCCCGTCTAAGTTATCGCGA+AGG | 0.649105 | 7_2:-84598760 | Msa1084320:three_prime_UTR |
TCTCGTACTGCACCAAGGAG+GGG | 0.650220 | 7_2:-84598835 | Msa1084320:three_prime_UTR |
TATGTTTATGAAGAAGTCGA+GGG | 0.652329 | 7_2:-84601394 | Msa1084320:CDS |
AACAATGAGAGAACGAACTG+TGG | 0.653907 | 7_2:-84600688 | Msa1084320:three_prime_UTR |
GATAGTGTGTCATAATCGCG+GGG | 0.655055 | 7_2:+84598733 | None:intergenic |
GACGAGGGTCAGGAGATCGA+AGG | 0.655187 | 7_2:-84601496 | Msa1084320:CDS |
AGCGGTGAAAAGAGGTTCTG+CGG | 0.657264 | 7_2:-84602634 | Msa1084320:CDS |
CAGGAACCGAGTTATGGCAG+AGG | 0.657705 | 7_2:-84598306 | Msa1084320:intron |
TATGATCCTGAGGAGTATGT+TGG | 0.661452 | 7_2:-84601550 | Msa1084320:CDS |
TTATCAGGAGTATGATCCTG+AGG | 0.661619 | 7_2:-84601560 | Msa1084320:CDS |
GTGATGATCGAAGACTTGAA+AGG | 0.662282 | 7_2:-84598798 | Msa1084320:three_prime_UTR |
ATCAGGATGATATTTCTCCA+CGG | 0.662731 | 7_2:-84598591 | Msa1084320:intron |
CTCCTGTAGGATCTAGCTGG+AGG | 0.663917 | 7_2:+84599124 | None:intergenic |
TAATCTTCATCCCATGAAGG+AGG | 0.664362 | 7_2:+84599664 | None:intergenic |
ATGCTACAGAGCATGATCTG+AGG | 0.664679 | 7_2:-84601216 | Msa1084320:CDS |
GAATTGGAAGTATTTGTTGG+GGG | 0.666063 | 7_2:-84601250 | Msa1084320:CDS |
GGTGCAGGTCGACTACGTGA+AGG | 0.668602 | 7_2:+84599286 | None:intergenic |
ATCTATTCAAAACTCACATG+GGG | 0.671395 | 7_2:-84598343 | Msa1084320:three_prime_UTR |
AGCTCTTCTTAAGAAATATG+GGG | 0.672819 | 7_2:-84599635 | Msa1084320:three_prime_UTR |
CGTCTCGTACTGCACCAAGG+AGG | 0.672911 | 7_2:-84598837 | Msa1084320:three_prime_UTR |
GGTAGTAGCAGTTATATGAG+TGG | 0.673587 | 7_2:-84597980 | Msa1084320:three_prime_UTR |
TCTTCTTAAGAAATATGGGG+CGG | 0.674967 | 7_2:-84599632 | Msa1084320:three_prime_UTR |
ACATGAGCAGGTCGACTCTG+TGG | 0.675687 | 7_2:+84599247 | None:intergenic |
TGGTAAACATGTTACTCACA+GGG | 0.677007 | 7_2:-84599344 | Msa1084320:three_prime_UTR |
GCACCAGCATCAGCATACCG+TGG | 0.677223 | 7_2:+84598574 | None:intergenic |
TCGCGATAACTTAGACGGGG+AGG | 0.679135 | 7_2:+84598763 | None:intergenic |
AGAGAATGTGGATGACGAAG+AGG | 0.681217 | 7_2:-84601452 | Msa1084320:CDS |
TTGGTGATGACTATGATGAG+AGG | 0.686384 | 7_2:-84601531 | Msa1084320:CDS |
TAATCATGTTCTTGATGCTG+CGG | 0.688082 | 7_2:-84602526 | Msa1084320:CDS |
CCTTCGCGATAACTTAGACG+GGG | 0.689612 | 7_2:+84598760 | None:intergenic |
AGTTATATGAGTGGTAGCGG+TGG | 0.689819 | 7_2:-84597971 | Msa1084320:three_prime_UTR |
GTGCCATAATATCATCACCC+AGG | 0.702483 | 7_2:+84600539 | None:intergenic |
AGTATCACTGTCCTGACATG+TGG | 0.709339 | 7_2:+84600941 | None:intergenic |
AGGGAAATTGAACAAGACGA+GGG | 0.710596 | 7_2:-84601511 | Msa1084320:CDS |
TGTGGTGCAGGTCGACTACG+TGG | 0.725851 | 7_2:+84599265 | None:intergenic |
ATACGTCTCGTACTGCACCA+AGG | 0.731756 | 7_2:-84598840 | Msa1084320:three_prime_UTR |
TGATGATGAGCATGCCAGTG+AGG | 0.745670 | 7_2:-84601350 | Msa1084320:CDS |
ATAGTGTGTCATAATCGCGG+GGG | 0.773160 | 7_2:+84598734 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTGAATTGAAATTATAAAAT+TGG | + | chr7_2:84597580-84597599 | None:intergenic | 10.0% |
!! | TAATTTCAATTCAATATTAT+TGG | - | chr7_2:84597586-84597605 | Msa1084320:three_prime_UTR | 10.0% |
!! | AATCATAAAAAAATAAAAAG+AGG | + | chr7_2:84597915-84597934 | None:intergenic | 10.0% |
!!! | ATTTTTTTATGATTTTTTTG+TGG | - | chr7_2:84597921-84597940 | Msa1084320:intron | 10.0% |
!!! | TTTTATAAATACTATAATGT+TGG | - | chr7_2:84598645-84598664 | Msa1084320:intron | 10.0% |
!!! | TTTATAGTAAACTATATTTT+TGG | - | chr7_2:84599986-84600005 | Msa1084320:intron | 10.0% |
!!! | ATTTTAAACATTCATTTTAA+TGG | - | chr7_2:84601679-84601698 | Msa1084320:intron | 10.0% |
!!! | AATTTCAGATTTTGATTTTA+GGG | - | chr7_2:84597632-84597651 | Msa1084320:three_prime_UTR | 15.0% |
!! | AAAAAATAAAAAGAGGAAAA+GGG | + | chr7_2:84597908-84597927 | None:intergenic | 15.0% |
!! | AAAAAAATAAAAAGAGGAAA+AGG | + | chr7_2:84597909-84597928 | None:intergenic | 15.0% |
!! | AATAAAATAAAAGAACTTCA+TGG | + | chr7_2:84598527-84598546 | None:intergenic | 15.0% |
!! | TAATAAAATCTGAAAAACAA+TGG | + | chr7_2:84600201-84600220 | None:intergenic | 15.0% |
!!! | TTTAAAATAGAATTTTACCA+TGG | + | chr7_2:84601667-84601686 | None:intergenic | 15.0% |
!!! | TTTTATATATGGCTAAATAT+TGG | - | chr7_2:84602265-84602284 | Msa1084320:intron | 15.0% |
!! | TTAATAAGAGAGAGAAATTT+GGG | + | chr7_2:84597537-84597556 | None:intergenic | 20.0% |
!! | TTTAATAAGAGAGAGAAATT+TGG | + | chr7_2:84597538-84597557 | None:intergenic | 20.0% |
!! | CTCTTATTAAATTCAGAATT+AGG | - | chr7_2:84597547-84597566 | Msa1084320:three_prime_UTR | 20.0% |
!! | CAATTCAATATTATTGGATT+CGG | - | chr7_2:84597592-84597611 | Msa1084320:three_prime_UTR | 20.0% |
!!! | CAATTTCAGATTTTGATTTT+AGG | - | chr7_2:84597631-84597650 | Msa1084320:three_prime_UTR | 20.0% |
!!! | TGTGGAATTTTTTCATTATT+TGG | - | chr7_2:84597939-84597958 | Msa1084320:intron | 20.0% |
!! | GATATAACATTATATCATAG+CGG | - | chr7_2:84598208-84598227 | Msa1084320:intron | 20.0% |
!! | TCATTAACAGTTAAAAACAA+GGG | + | chr7_2:84599562-84599581 | None:intergenic | 20.0% |
!! | TTCATTAACAGTTAAAAACA+AGG | + | chr7_2:84599563-84599582 | None:intergenic | 20.0% |
!!! | TATTATCGCAATTTTAAAAG+TGG | - | chr7_2:84600409-84600428 | Msa1084320:intron | 20.0% |
!!! | ATTCTTAAATTTTATTCTGC+TGG | - | chr7_2:84602292-84602311 | Msa1084320:intron | 20.0% |
!!! | AAATATAAAGATGTCATTTG+AGG | + | chr7_2:84602463-84602482 | None:intergenic | 20.0% |
!! | TAAACATATCTAAATGTAAC+AGG | - | chr7_2:84602536-84602555 | Msa1084320:CDS | 20.0% |
!!! | TAATCTTTTCTTCAAAATGA+CGG | + | chr7_2:84602610-84602629 | None:intergenic | 20.0% |
!! | TTGAAGTTATTCAATTTATG+AGG | - | chr7_2:84602715-84602734 | Msa1084320:five_prime_UTR | 20.0% |
!! | GGTTAATTCTAAATGTAAAA+AGG | - | chr7_2:84602736-84602755 | Msa1084320:five_prime_UTR | 20.0% |
!! | AAAAAAAAAATCCAAATCCA+TGG | + | chr7_2:84602844-84602863 | None:intergenic | 20.0% |
! | GATGATTATCAAGTGAATTT+AGG | - | chr7_2:84598055-84598074 | Msa1084320:intron | 25.0% |
!! | TTATCAAGTGAATTTAGGTT+AGG | - | chr7_2:84598060-84598079 | Msa1084320:intron | 25.0% |
!! | TATCAAGTGAATTTAGGTTA+GGG | - | chr7_2:84598061-84598080 | Msa1084320:intron | 25.0% |
! | TCTTTAATGTTGTCAAATAG+TGG | - | chr7_2:84598107-84598126 | Msa1084320:intron | 25.0% |
!!! | TTGTGAATTTTGATGGTTTT+GGG | - | chr7_2:84598284-84598303 | Msa1084320:intron | 25.0% |
!!! | TTTTGTACTTCTGTCATTTT+GGG | - | chr7_2:84598462-84598481 | Msa1084320:intron | 25.0% |
!!! | ATCTTTTTCATATTCATCTG+TGG | + | chr7_2:84598748-84598767 | None:intergenic | 25.0% |
!!! | AGATTTTGAGGATAATTATC+AGG | - | chr7_2:84598776-84598795 | Msa1084320:three_prime_UTR | 25.0% |
! | TGACTACAATTTCAGATTAA+TGG | - | chr7_2:84599370-84599389 | Msa1084320:three_prime_UTR | 25.0% |
! | TAATAGTAGTAAGCATTACT+CGG | + | chr7_2:84599520-84599539 | None:intergenic | 25.0% |
! | AAGGAGAAATTGAAACATTA+TGG | - | chr7_2:84599600-84599619 | Msa1084320:three_prime_UTR | 25.0% |
! | ATAAAAATGAACCACTATTG+AGG | + | chr7_2:84599971-84599990 | None:intergenic | 25.0% |
! | ATTACTTATAAAAGCAACAC+TGG | - | chr7_2:84600037-84600056 | Msa1084320:intron | 25.0% |
! | TTACTTATAAAAGCAACACT+GGG | - | chr7_2:84600038-84600057 | Msa1084320:intron | 25.0% |
! | CTAGACATTAAAACTACTTT+AGG | + | chr7_2:84600150-84600169 | None:intergenic | 25.0% |
! | TTAAGCACAAAACTCTTATT+AGG | + | chr7_2:84600578-84600597 | None:intergenic | 25.0% |
!!! | ATAAGAGTTTTGTGCTTAAT+AGG | - | chr7_2:84600579-84600598 | Msa1084320:three_prime_UTR | 25.0% |
!!! | AATTATGGATTTGTTACGTT+TGG | - | chr7_2:84600789-84600808 | Msa1084320:intron | 25.0% |
! | TAATAACAGAATCTCTACTA+TGG | + | chr7_2:84601279-84601298 | None:intergenic | 25.0% |
!!! | CTTATTTTTCATTTCTCATC+AGG | - | chr7_2:84601743-84601762 | Msa1084320:intron | 25.0% |
! | TATCTATTCAAAACTCACAT+GGG | - | chr7_2:84602007-84602026 | Msa1084320:intron | 25.0% |
!! | TGGAAGTAGTGTTTTATATA+TGG | - | chr7_2:84602254-84602273 | Msa1084320:intron | 25.0% |
! | ATCTTTATATTTCTCCCAAT+GGG | - | chr7_2:84602471-84602490 | Msa1084320:intron | 25.0% |
! | ATATGTTTAGACAAATTCAC+CGG | + | chr7_2:84602525-84602544 | None:intergenic | 25.0% |
!! | AATCTTTTCTTCAAAATGAC+GGG | + | chr7_2:84602609-84602628 | None:intergenic | 25.0% |
! | GTTCATTTGGAAAGAAAATA+AGG | - | chr7_2:84602817-84602836 | Msa1084320:five_prime_UTR | 25.0% |
CTGAAATTGATGAAGATGAA+AGG | + | chr7_2:84597620-84597639 | None:intergenic | 30.0% | |
!! | CAACACAAGAAAGTGTTATT+CGG | + | chr7_2:84597667-84597686 | None:intergenic | 30.0% |
GAATAACACTTTCTTGTGTT+GGG | - | chr7_2:84597666-84597685 | Msa1084320:three_prime_UTR | 30.0% | |
TTATCTTCATGATTCTGGAT+AGG | + | chr7_2:84597808-84597827 | None:intergenic | 30.0% | |
CATGATTATCTTCATGATTC+TGG | + | chr7_2:84597813-84597832 | None:intergenic | 30.0% | |
ATTATGTTTGATGCGTATTG+TGG | - | chr7_2:84597980-84597999 | Msa1084320:three_prime_UTR | 30.0% | |
! | ATCAAGTGAATTTAGGTTAG+GGG | - | chr7_2:84598062-84598081 | Msa1084320:intron | 30.0% |
TATAGGCTATAAACACATAG+CGG | - | chr7_2:84598131-84598150 | Msa1084320:intron | 30.0% | |
!! | CTTGTGAATTTTGATGGTTT+TGG | - | chr7_2:84598283-84598302 | Msa1084320:intron | 30.0% |
! | TTTGGAAGTTATGGGATTTT+TGG | - | chr7_2:84598377-84598396 | Msa1084320:three_prime_UTR | 30.0% |
TTTGATAGACCGTGATTAAA+TGG | - | chr7_2:84598420-84598439 | Msa1084320:intron | 30.0% | |
!! | GTTTTGTACTTCTGTCATTT+TGG | - | chr7_2:84598461-84598480 | Msa1084320:intron | 30.0% |
AGGTAACAACTATTGTGTAT+AGG | - | chr7_2:84598491-84598510 | Msa1084320:intron | 30.0% | |
GGTAACAACTATTGTGTATA+GGG | - | chr7_2:84598492-84598511 | Msa1084320:intron | 30.0% | |
GCTGGATTGATTATAGAAAA+TGG | - | chr7_2:84598612-84598631 | Msa1084320:intron | 30.0% | |
!!! | AAATTCGAGAGTGTTTTGAT+CGG | - | chr7_2:84598669-84598688 | Msa1084320:intron | 30.0% |
! | AGATGAACACTTAGATTTTG+AGG | - | chr7_2:84598764-84598783 | Msa1084320:three_prime_UTR | 30.0% |
ATATGTTTATGAAGAAGTCG+AGG | - | chr7_2:84598956-84598975 | Msa1084320:three_prime_UTR | 30.0% | |
TATGTTTATGAAGAAGTCGA+GGG | - | chr7_2:84598957-84598976 | Msa1084320:three_prime_UTR | 30.0% | |
!! | AAGGAATTGGAAGTATTTGT+TGG | - | chr7_2:84599098-84599117 | Msa1084320:intron | 30.0% |
!! | AGGAATTGGAAGTATTTGTT+GGG | - | chr7_2:84599099-84599118 | Msa1084320:intron | 30.0% |
TAGATAACATTTGCAAGACA+TGG | - | chr7_2:84599440-84599459 | Msa1084320:intron | 30.0% | |
!!! | AAGCTGTAAGTCTTTTTTCT+GGG | - | chr7_2:84599470-84599489 | Msa1084320:intron | 30.0% |
AATAGTAGTAAGCATTACTC+GGG | + | chr7_2:84599519-84599538 | None:intergenic | 30.0% | |
GTTTCAATTTCTCCTTTAAC+TGG | + | chr7_2:84599596-84599615 | None:intergenic | 30.0% | |
TTATGGAGTTGAAAGTTTCA+AGG | - | chr7_2:84599617-84599636 | Msa1084320:three_prime_UTR | 30.0% | |
GATTTGACTATAGTAGAAGA+TGG | - | chr7_2:84599639-84599658 | Msa1084320:three_prime_UTR | 30.0% | |
! | TTTTGCAGGTTCAATATATC+AGG | + | chr7_2:84599879-84599898 | None:intergenic | 30.0% |
TATATTGAACCTGCAAAAGA+TGG | - | chr7_2:84599881-84599900 | Msa1084320:intron | 30.0% | |
TTTGATCTCATTCAATCGTT+TGG | - | chr7_2:84599907-84599926 | Msa1084320:intron | 30.0% | |
TTGATCTCATTCAATCGTTT+GGG | - | chr7_2:84599908-84599927 | Msa1084320:intron | 30.0% | |
ATATTTAACCTAGTCTACTC+TGG | - | chr7_2:84600097-84600116 | Msa1084320:intron | 30.0% | |
AATCTGAAAAACAATGGACA+TGG | + | chr7_2:84600195-84600214 | None:intergenic | 30.0% | |
GACAGAAATAAGATGATGAT+CGG | - | chr7_2:84600317-84600336 | Msa1084320:intron | 30.0% | |
!! | ATGTCAGAGGTATAATTTTC+AGG | - | chr7_2:84600476-84600495 | Msa1084320:intron | 30.0% |
!! | TGTCAGAGGTATAATTTTCA+GGG | - | chr7_2:84600477-84600496 | Msa1084320:intron | 30.0% |
TGTATGTTATCGTATGATTG+TGG | - | chr7_2:84600528-84600547 | Msa1084320:intron | 30.0% | |
TCAGTTACACCAAAAACAAA+TGG | + | chr7_2:84600619-84600638 | None:intergenic | 30.0% | |
ATCAAATGCATCTAAATTGC+AGG | - | chr7_2:84600638-84600657 | Msa1084320:three_prime_UTR | 30.0% | |
CATATTTCTTAAGAAGAGCT+CGG | + | chr7_2:84600716-84600735 | None:intergenic | 30.0% | |
GAGCTCTTCTTAAGAAATAT+GGG | - | chr7_2:84600715-84600734 | Msa1084320:three_prime_UTR | 30.0% | |
AGCTCTTCTTAAGAAATATG+GGG | - | chr7_2:84600716-84600735 | Msa1084320:three_prime_UTR | 30.0% | |
AGTAGAGTTTCTACAGATTA+TGG | - | chr7_2:84601408-84601427 | Msa1084320:CDS | 30.0% | |
ATAAGTTAGCAAAGAACAAC+AGG | + | chr7_2:84601922-84601941 | None:intergenic | 30.0% | |
!!! | TTCCTCACATTTTGATTAGT+AGG | - | chr7_2:84601941-84601960 | Msa1084320:intron | 30.0% |
! | AGATCTAGTTTAGGATATAG+TGG | - | chr7_2:84601970-84601989 | Msa1084320:intron | 30.0% |
CTATCTATTCAAAACTCACA+TGG | - | chr7_2:84602006-84602025 | Msa1084320:intron | 30.0% | |
ATCTATTCAAAACTCACATG+GGG | - | chr7_2:84602008-84602027 | Msa1084320:intron | 30.0% | |
TTTCTTGTATGTTGTGTATC+AGG | - | chr7_2:84602135-84602154 | Msa1084320:intron | 30.0% | |
ATGTTACTATCCTTTCTGAT+TGG | - | chr7_2:84602234-84602253 | Msa1084320:intron | 30.0% | |
! | CTTAAATTTTATTCTGCTGG+TGG | - | chr7_2:84602295-84602314 | Msa1084320:intron | 30.0% |
GGATCTAGATCTTATTATTG+AGG | - | chr7_2:84602404-84602423 | Msa1084320:intron | 30.0% | |
GGTAAGTCATCTTATTCTTT+AGG | - | chr7_2:84602425-84602444 | Msa1084320:intron | 30.0% | |
AAGTCATCTTATTCTTTAGG+CGG | - | chr7_2:84602428-84602447 | Msa1084320:intron | 30.0% | |
CATCTTTATATTTCTCCCAA+TGG | - | chr7_2:84602470-84602489 | Msa1084320:intron | 30.0% | |
! | GATGTGAATTTTGTAGCTTA+TGG | - | chr7_2:84602572-84602591 | Msa1084320:CDS | 30.0% |
! | TTGGAATTTTCCACTATTCA+AGG | - | chr7_2:84602650-84602669 | Msa1084320:exon | 30.0% |
TTGAAGTAATCCTTGAATAG+TGG | + | chr7_2:84602663-84602682 | None:intergenic | 30.0% | |
TACTTCAATCCAAGATATCT+TGG | - | chr7_2:84602675-84602694 | Msa1084320:five_prime_UTR | 30.0% | |
AGGAGCTATCATATAAAACT+AGG | + | chr7_2:84602791-84602810 | None:intergenic | 30.0% | |
!!! | TAGTTTTATATGATAGCTCC+TGG | - | chr7_2:84602790-84602809 | Msa1084320:five_prime_UTR | 30.0% |
ATATAGAAAACCACAGAGAG+CGG | + | chr7_2:84597502-84597521 | None:intergenic | 35.0% | |
CGAATAACACTTTCTTGTGT+TGG | - | chr7_2:84597665-84597684 | Msa1084320:three_prime_UTR | 35.0% | |
TAATCATGTTCTTGATGCTG+CGG | - | chr7_2:84597825-84597844 | Msa1084320:intron | 35.0% | |
ATTGTGGCTGTTATGTGATA+TGG | - | chr7_2:84597996-84598015 | Msa1084320:three_prime_UTR | 35.0% | |
TGTTGTCAAATAGTGGCTAT+AGG | - | chr7_2:84598114-84598133 | Msa1084320:intron | 35.0% | |
! | ATACGAGTGTTGTCTAATAG+TGG | - | chr7_2:84598186-84598205 | Msa1084320:three_prime_UTR | 35.0% |
! | GGTTGTCTTGTGAATTTTGA+TGG | - | chr7_2:84598277-84598296 | Msa1084320:intron | 35.0% |
TAACTTCCAAAGTACACCAA+GGG | + | chr7_2:84598368-84598387 | None:intergenic | 35.0% | |
ATAACTTCCAAAGTACACCA+AGG | + | chr7_2:84598369-84598388 | None:intergenic | 35.0% | |
! | TTGGTGTACTTTGGAAGTTA+TGG | - | chr7_2:84598368-84598387 | Msa1084320:three_prime_UTR | 35.0% |
! | TGGTGTACTTTGGAAGTTAT+GGG | - | chr7_2:84598369-84598388 | Msa1084320:three_prime_UTR | 35.0% |
TGTGCAGTACCATTTAATCA+CGG | + | chr7_2:84598432-84598451 | None:intergenic | 35.0% | |
! | GTGTTTTATCTCATGTGATG+CGG | - | chr7_2:84598586-84598605 | Msa1084320:three_prime_UTR | 35.0% |
! | TGTTTTATCTCATGTGATGC+GGG | - | chr7_2:84598587-84598606 | Msa1084320:three_prime_UTR | 35.0% |
!!! | AATTCGAGAGTGTTTTGATC+GGG | - | chr7_2:84598670-84598689 | Msa1084320:intron | 35.0% |
TCTTATAGCAGACAATGTAG+AGG | - | chr7_2:84598710-84598729 | Msa1084320:three_prime_UTR | 35.0% | |
! | GGAACAAGTTGAAGTTAGAA+CGG | - | chr7_2:84599061-84599080 | Msa1084320:intron | 35.0% |
!! | GGAATTGGAAGTATTTGTTG+GGG | - | chr7_2:84599100-84599119 | Msa1084320:intron | 35.0% |
!! | GAATTGGAAGTATTTGTTGG+GGG | - | chr7_2:84599101-84599120 | Msa1084320:intron | 35.0% |
! | AGGAAGGTTTTCAGTAAAGT+TGG | - | chr7_2:84599155-84599174 | Msa1084320:three_prime_UTR | 35.0% |
! | GGAAGGTTTTCAGTAAAGTT+GGG | - | chr7_2:84599156-84599175 | Msa1084320:three_prime_UTR | 35.0% |
! | GAAGGTTTTCAGTAAAGTTG+GGG | - | chr7_2:84599157-84599176 | Msa1084320:three_prime_UTR | 35.0% |
AGAAGATCAAAGATTACCAC+TGG | + | chr7_2:84599299-84599318 | None:intergenic | 35.0% | |
GGTAATCTTTGATCTTCTCA+TGG | - | chr7_2:84599301-84599320 | Msa1084320:three_prime_UTR | 35.0% | |
CAGATTAATGGCAAACAATG+TGG | - | chr7_2:84599382-84599401 | Msa1084320:three_prime_UTR | 35.0% | |
CATTTGCAAGACATGGAAAA+AGG | - | chr7_2:84599447-84599466 | Msa1084320:intron | 35.0% | |
!!! | GAAGCTGTAAGTCTTTTTTC+TGG | - | chr7_2:84599469-84599488 | Msa1084320:intron | 35.0% |
AAACTTCTGATGCCAGTTAA+AGG | - | chr7_2:84599581-84599600 | Msa1084320:three_prime_UTR | 35.0% | |
!!! | CAGAAGACAGATGTTGTTTT+TGG | - | chr7_2:84599744-84599763 | Msa1084320:intron | 35.0% |
GTCAATAAAGGAGTTTGCAA+AGG | + | chr7_2:84599793-84599812 | None:intergenic | 35.0% | |
TTATGGCACAGGTATATTTC+TGG | - | chr7_2:84599826-84599845 | Msa1084320:intron | 35.0% | |
!! | TCATTTCCTTGCTTTTGTCA+AGG | - | chr7_2:84599852-84599871 | Msa1084320:intron | 35.0% |
!! | CATTTCCTTGCTTTTGTCAA+GGG | - | chr7_2:84599853-84599872 | Msa1084320:intron | 35.0% |
! | ATCAAAGAACCATCTTTTGC+AGG | + | chr7_2:84599893-84599912 | None:intergenic | 35.0% |
TCATTCAATCGTTTGGGAAT+TGG | - | chr7_2:84599914-84599933 | Msa1084320:intron | 35.0% | |
CATTCAATCGTTTGGGAATT+GGG | - | chr7_2:84599915-84599934 | Msa1084320:intron | 35.0% | |
! | TTGTTGATTGCTATGATGCA+CGG | - | chr7_2:84600239-84600258 | Msa1084320:intron | 35.0% |
!! | GAGTTTTGTGCTTAATAGGT+TGG | - | chr7_2:84600583-84600602 | Msa1084320:three_prime_UTR | 35.0% |
!!! | GAAGTTGTGCCATTTGTTTT+TGG | - | chr7_2:84600607-84600626 | Msa1084320:three_prime_UTR | 35.0% |
ACATAATCTTCATCCCATGA+AGG | + | chr7_2:84600693-84600712 | None:intergenic | 35.0% | |
CGAGCTCTTCTTAAGAAATA+TGG | - | chr7_2:84600714-84600733 | Msa1084320:three_prime_UTR | 35.0% | |
TCTTCTTAAGAAATATGGGG+CGG | - | chr7_2:84600719-84600738 | Msa1084320:three_prime_UTR | 35.0% | |
CTTCTTTCAGGCAAAAGTTA+GGG | - | chr7_2:84600953-84600972 | Msa1084320:three_prime_UTR | 35.0% | |
ACATGTTTACCACGAACTTT+CGG | + | chr7_2:84600999-84601018 | None:intergenic | 35.0% | |
TGGTAAACATGTTACTCACA+GGG | - | chr7_2:84601007-84601026 | Msa1084320:exon | 35.0% | |
TCTGTAGAAACTCTACTTCT+TGG | + | chr7_2:84601405-84601424 | None:intergenic | 35.0% | |
GCTGGATAATCTCTATAAGA+TGG | + | chr7_2:84601459-84601478 | None:intergenic | 35.0% | |
! | AATTTTACCATGGCAGCATA+AGG | + | chr7_2:84601657-84601676 | None:intergenic | 35.0% |
ATCAGGATGATATTTCTCCA+CGG | - | chr7_2:84601760-84601779 | Msa1084320:intron | 35.0% | |
AGTCTAAACGAGATCTTGAT+TGG | + | chr7_2:84601806-84601825 | None:intergenic | 35.0% | |
TCTCGTTTAGACTATGACTA+TGG | - | chr7_2:84601813-84601832 | Msa1084320:intron | 35.0% | |
AGCCTACTAATCAAAATGTG+AGG | + | chr7_2:84601946-84601965 | None:intergenic | 35.0% | |
! | AGGCTTGAAAGATCTAGTTT+AGG | - | chr7_2:84601961-84601980 | Msa1084320:intron | 35.0% |
ATCTACTCATCAAGTTATGG+TGG | - | chr7_2:84602183-84602202 | Msa1084320:intron | 35.0% | |
AACACTACTTCCAATCAGAA+AGG | + | chr7_2:84602247-84602266 | None:intergenic | 35.0% | |
! | TTTTATTCTGCTGGTGGTTT+AGG | - | chr7_2:84602301-84602320 | Msa1084320:intron | 35.0% |
ATTCGTCCATGTATTCTAGT+AGG | - | chr7_2:84602339-84602358 | Msa1084320:intron | 35.0% | |
TTCGTCCATGTATTCTAGTA+GGG | - | chr7_2:84602340-84602359 | Msa1084320:intron | 35.0% | |
! | TATTCTAGTAGGGGTATGAA+CGG | - | chr7_2:84602350-84602369 | Msa1084320:intron | 35.0% |
CATATCTAAATGTAACAGGC+TGG | - | chr7_2:84602540-84602559 | Msa1084320:CDS | 35.0% | |
TGCTGAGTTATAGACTGATT+TGG | - | chr7_2:84602631-84602650 | Msa1084320:CDS | 35.0% | |
AGAGAAGATCCAAGATATCT+TGG | + | chr7_2:84602687-84602706 | None:intergenic | 35.0% | |
TGGAAAGAAAATAAGGTCCA+TGG | - | chr7_2:84602824-84602843 | Msa1084320:five_prime_UTR | 35.0% | |
GAAAATAAGGTCCATGGATT+TGG | - | chr7_2:84602830-84602849 | Msa1084320:five_prime_UTR | 35.0% | |
!! | TGTGGCTTTTGAAGAAACCT+TGG | + | chr7_2:84597752-84597771 | None:intergenic | 40.0% |
!! | TTGCTGTTGATTCTGAGTTG+TGG | + | chr7_2:84597770-84597789 | None:intergenic | 40.0% |
TCATGATTCTGGATAGGTTC+AGG | + | chr7_2:84597802-84597821 | None:intergenic | 40.0% | |
TCTGTTGAAACAGTGCCTAA+TGG | - | chr7_2:84597859-84597878 | Msa1084320:intron | 40.0% | |
! | GGTTAGGGGAAATTTTCTAC+TGG | - | chr7_2:84598076-84598095 | Msa1084320:intron | 40.0% |
! | GGTGATAGTGAATGAAGTGA+TGG | - | chr7_2:84598315-84598334 | Msa1084320:three_prime_UTR | 40.0% |
!!! | TCTGTCATTTTGGGAACTTG+AGG | - | chr7_2:84598471-84598490 | Msa1084320:intron | 40.0% |
TATAGCAGACAATGTAGAGG+AGG | - | chr7_2:84598713-84598732 | Msa1084320:three_prime_UTR | 40.0% | |
AGACAATGTAGAGGAGGTTA+AGG | - | chr7_2:84598719-84598738 | Msa1084320:three_prime_UTR | 40.0% | |
! | TTATCAGGAGTATGATCCTG+AGG | - | chr7_2:84598791-84598810 | Msa1084320:three_prime_UTR | 40.0% |
! | TATGATCCTGAGGAGTATGT+TGG | - | chr7_2:84598801-84598820 | Msa1084320:three_prime_UTR | 40.0% |
!! | TTGGTGATGACTATGATGAG+AGG | - | chr7_2:84598820-84598839 | Msa1084320:three_prime_UTR | 40.0% |
! | TGGTGATGACTATGATGAGA+GGG | - | chr7_2:84598821-84598840 | Msa1084320:three_prime_UTR | 40.0% |
AGGGAAATTGAACAAGACGA+GGG | - | chr7_2:84598840-84598859 | Msa1084320:three_prime_UTR | 40.0% | |
CGTTGAATCCTCAGACTAAA+AGG | - | chr7_2:84599201-84599220 | Msa1084320:three_prime_UTR | 40.0% | |
TCCTCAGACTAAAAGGAACA+AGG | - | chr7_2:84599208-84599227 | Msa1084320:three_prime_UTR | 40.0% | |
CCTCAGACTAAAAGGAACAA+GGG | - | chr7_2:84599209-84599228 | Msa1084320:three_prime_UTR | 40.0% | |
GACAGAGCTAAAAAATCCAG+TGG | - | chr7_2:84599280-84599299 | Msa1084320:three_prime_UTR | 40.0% | |
ATTACATCTTGCCACCTTCA+AGG | - | chr7_2:84599536-84599555 | Msa1084320:three_prime_UTR | 40.0% | |
GTTAAAAACAAGGGCCTTGA+AGG | + | chr7_2:84599553-84599572 | None:intergenic | 40.0% | |
AACAATGAGAGAACGAACTG+TGG | - | chr7_2:84599663-84599682 | Msa1084320:three_prime_UTR | 40.0% | |
TGTCTTCTGCAATCGCTTAT+AGG | + | chr7_2:84599733-84599752 | None:intergenic | 40.0% | |
TGCAAACTCCTTTATTGACC+TGG | - | chr7_2:84599794-84599813 | Msa1084320:intron | 40.0% | |
GCAAACTCCTTTATTGACCT+GGG | - | chr7_2:84599795-84599814 | Msa1084320:intron | 40.0% | |
ATCATCACCCAGGTCAATAA+AGG | + | chr7_2:84599805-84599824 | None:intergenic | 40.0% | |
TGACCTGGGTGATGATATTA+TGG | - | chr7_2:84599809-84599828 | Msa1084320:intron | 40.0% | |
CCAACATAAATGTGTACCGA+TGG | + | chr7_2:84599941-84599960 | None:intergenic | 40.0% | |
CCATCGGTACACATTTATGT+TGG | - | chr7_2:84599938-84599957 | Msa1084320:intron | 40.0% | |
TTGGCTTCAAACCTCAATAG+TGG | - | chr7_2:84599957-84599976 | Msa1084320:intron | 40.0% | |
TTTAACCTAGTCTACTCTGG+AGG | - | chr7_2:84600100-84600119 | Msa1084320:intron | 40.0% | |
GAAAAACAATGGACATGGCA+AGG | + | chr7_2:84600190-84600209 | None:intergenic | 40.0% | |
TTGATTTACTGCCTCCTTCA+TGG | - | chr7_2:84600676-84600695 | Msa1084320:three_prime_UTR | 40.0% | |
TGATTTACTGCCTCCTTCAT+GGG | - | chr7_2:84600677-84600696 | Msa1084320:three_prime_UTR | 40.0% | |
TAATCTTCATCCCATGAAGG+AGG | + | chr7_2:84600690-84600709 | None:intergenic | 40.0% | |
GTTAGGTGAAGGCAACAAAA+AGG | - | chr7_2:84600860-84600879 | Msa1084320:intron | 40.0% | |
AGGCAACAAAAAGGTCTGTT+TGG | - | chr7_2:84600869-84600888 | Msa1084320:intron | 40.0% | |
GCTTCTTTCAGGCAAAAGTT+AGG | - | chr7_2:84600952-84600971 | Msa1084320:three_prime_UTR | 40.0% | |
GTGGTAAACATGTTACTCAC+AGG | - | chr7_2:84601006-84601025 | Msa1084320:exon | 40.0% | |
TTGCCAATCTTCCAATCTTG+CGG | + | chr7_2:84601043-84601062 | None:intergenic | 40.0% | |
CTCATGTGTTCAGAAGACTT+GGG | - | chr7_2:84601120-84601139 | Msa1084320:CDS | 40.0% | |
! | CGTCTATTTCTCTCACTAGA+AGG | + | chr7_2:84601167-84601186 | None:intergenic | 40.0% |
!!! | TCTCTCTTCGTGCTACTTTT+TGG | + | chr7_2:84601354-84601373 | None:intergenic | 40.0% |
AGTAGCACGAAGAGAGATTA+TGG | - | chr7_2:84601357-84601376 | Msa1084320:CDS | 40.0% | |
GTAGAAACTCTACTTCTTGG+AGG | + | chr7_2:84601402-84601421 | None:intergenic | 40.0% | |
TTCTACAGATTATGGCTCTC+AGG | - | chr7_2:84601416-84601435 | Msa1084320:CDS | 40.0% | |
ATAAGATGGACGTCTTTGAG+AGG | + | chr7_2:84601445-84601464 | None:intergenic | 40.0% | |
GTGATGATCGAAGACTTGAA+AGG | - | chr7_2:84601553-84601572 | Msa1084320:CDS | 40.0% | |
AGATAGTGTGTCATAATCGC+GGG | + | chr7_2:84601622-84601641 | None:intergenic | 40.0% | |
CAGATAGTGTGTCATAATCG+CGG | + | chr7_2:84601623-84601642 | None:intergenic | 40.0% | |
CGTTTAGACTATGACTATGG+AGG | - | chr7_2:84601816-84601835 | Msa1084320:intron | 40.0% | |
ACCATAAGCCTCTCTATATC+GGG | + | chr7_2:84601850-84601869 | None:intergenic | 40.0% | |
CACCATAAGCCTCTCTATAT+CGG | + | chr7_2:84601851-84601870 | None:intergenic | 40.0% | |
ATAGAGAGGCTTATGGTGAT+AGG | - | chr7_2:84601853-84601872 | Msa1084320:intron | 40.0% | |
AAAGAACAACAGGATCAGGT+TGG | + | chr7_2:84601912-84601931 | None:intergenic | 40.0% | |
TAGCAAAGAACAACAGGATC+AGG | + | chr7_2:84601916-84601935 | None:intergenic | 40.0% | |
TATTCACCTCTGCCATAACT+CGG | + | chr7_2:84602054-84602073 | None:intergenic | 40.0% | |
GGCATCTACTCATCAAGTTA+TGG | - | chr7_2:84602180-84602199 | Msa1084320:intron | 40.0% | |
TCGTCCATGTATTCTAGTAG+GGG | - | chr7_2:84602341-84602360 | Msa1084320:intron | 40.0% | |
CATACCCCTACTAGAATACA+TGG | + | chr7_2:84602348-84602367 | None:intergenic | 40.0% | |
GGTAGTAGCAGTTATATGAG+TGG | - | chr7_2:84602371-84602390 | Msa1084320:intron | 40.0% | |
AGCAGTTATATGAGTGGTAG+CGG | - | chr7_2:84602377-84602396 | Msa1084320:intron | 40.0% | |
TTTGATTCATCCGCTCTCTG+TGG | - | chr7_2:84597489-84597508 | Msa1084320:three_prime_UTR | 45.0% | |
! | GAACCTCTTTTCACCGCTTT+CGG | + | chr7_2:84597715-84597734 | None:intergenic | 45.0% |
! | TTCTGGATAGGTTCAGGTTC+AGG | + | chr7_2:84597796-84597815 | None:intergenic | 45.0% |
TGTTTCCTGCGATCATGGAT+TGG | - | chr7_2:84598247-84598266 | Msa1084320:intron | 45.0% | |
!!! | TGATGGTTTTGGGAGACTAC+TGG | - | chr7_2:84598294-84598313 | Msa1084320:intron | 45.0% |
TCATCACCAACATACTCCTC+AGG | + | chr7_2:84598810-84598829 | None:intergenic | 45.0% | |
GAGGGAAATTGAACAAGACG+AGG | - | chr7_2:84598839-84598858 | Msa1084320:three_prime_UTR | 45.0% | |
AATTGAACAAGACGAGGGTC+AGG | - | chr7_2:84598845-84598864 | Msa1084320:three_prime_UTR | 45.0% | |
GGAAGAACCTGAAGAGAATG+TGG | - | chr7_2:84598887-84598906 | Msa1084320:three_prime_UTR | 45.0% | |
TCGTCATCCACATTCTCTTC+AGG | + | chr7_2:84598897-84598916 | None:intergenic | 45.0% | |
AGAGAATGTGGATGACGAAG+AGG | - | chr7_2:84598899-84598918 | Msa1084320:three_prime_UTR | 45.0% | |
GAGAATGTGGATGACGAAGA+GGG | - | chr7_2:84598900-84598919 | Msa1084320:three_prime_UTR | 45.0% | |
! | GGTGATGATGATGATGTTGC+TGG | - | chr7_2:84598978-84598997 | Msa1084320:three_prime_UTR | 45.0% |
TGAGCATCTGGCTGATGTAA+AGG | - | chr7_2:84599034-84599053 | Msa1084320:intron | 45.0% | |
TCTGGCTGATGTAAAGGAAG+AGG | - | chr7_2:84599040-84599059 | Msa1084320:intron | 45.0% | |
AACGCAGAAGCAGAAGGAAT+TGG | - | chr7_2:84599085-84599104 | Msa1084320:intron | 45.0% | |
ATGCTACAGAGCATGATCTG+AGG | - | chr7_2:84599135-84599154 | Msa1084320:three_prime_UTR | 45.0% | |
TACAGAGCATGATCTGAGGA+AGG | - | chr7_2:84599139-84599158 | Msa1084320:three_prime_UTR | 45.0% | |
! | CCCTTGTTCCTTTTAGTCTG+AGG | + | chr7_2:84599212-84599231 | None:intergenic | 45.0% |
ATGTGGTATCACCACATGTC+AGG | - | chr7_2:84599399-84599418 | Msa1084320:intron | 45.0% | |
AGTATCACTGTCCTGACATG+TGG | + | chr7_2:84599413-84599432 | None:intergenic | 45.0% | |
AAAAACAAGGGCCTTGAAGG+TGG | + | chr7_2:84599550-84599569 | None:intergenic | 45.0% | |
TTCGTCTCGTTCAGATGCTA+AGG | - | chr7_2:84599704-84599723 | Msa1084320:intron | 45.0% | |
GGAGTTTGCAAAGGAAACCT+CGG | + | chr7_2:84599784-84599803 | None:intergenic | 45.0% | |
GTGCCATAATATCATCACCC+AGG | + | chr7_2:84599815-84599834 | None:intergenic | 45.0% | |
GGGTGATGATATTATGGCAC+AGG | - | chr7_2:84599815-84599834 | Msa1084320:intron | 45.0% | |
AACAATGGACATGGCAAGGA+TGG | + | chr7_2:84600186-84600205 | None:intergenic | 45.0% | |
ACTGTCTGTAGCTATGTCAG+AGG | - | chr7_2:84600463-84600482 | Msa1084320:intron | 45.0% | |
GTATGATTGTGGCTGACTGT+TGG | - | chr7_2:84600539-84600558 | Msa1084320:three_prime_UTR | 45.0% | |
! | CGCTTCTTGTTGCTTCTTTC+AGG | - | chr7_2:84600941-84600960 | Msa1084320:three_prime_UTR | 45.0% |
TTACCACGAACTTTCGGAAG+AGG | + | chr7_2:84600993-84601012 | None:intergenic | 45.0% | |
!! | GACATTTCTAGCCGCAAGAT+TGG | - | chr7_2:84601029-84601048 | Msa1084320:CDS | 45.0% |
TAGCCGCAAGATTGGAAGAT+TGG | - | chr7_2:84601037-84601056 | Msa1084320:CDS | 45.0% | |
GCAAGATTGGAAGATTGGCA+AGG | - | chr7_2:84601042-84601061 | Msa1084320:CDS | 45.0% | |
AGTCTTCTGAACACATGAGC+AGG | + | chr7_2:84601119-84601138 | None:intergenic | 45.0% | |
GCTCATGTGTTCAGAAGACT+TGG | - | chr7_2:84601119-84601138 | Msa1084320:CDS | 45.0% | |
TCACTAGAAGGTCTAACTGG+TGG | + | chr7_2:84601155-84601174 | None:intergenic | 45.0% | |
CTCTCACTAGAAGGTCTAAC+TGG | + | chr7_2:84601158-84601177 | None:intergenic | 45.0% | |
AATCTCCTGTAGGATCTAGC+TGG | + | chr7_2:84601233-84601252 | None:intergenic | 45.0% | |
AGATCCTACAGGAGATTAGC+AGG | - | chr7_2:84601236-84601255 | Msa1084320:CDS | 45.0% | |
CATACCTGCTAATCTCCTGT+AGG | + | chr7_2:84601243-84601262 | None:intergenic | 45.0% | |
GAAACTCTACTTCTTGGAGG+TGG | + | chr7_2:84601399-84601418 | None:intergenic | 45.0% | |
TACAGATTATGGCTCTCAGG+TGG | - | chr7_2:84601419-84601438 | Msa1084320:CDS | 45.0% | |
TCCTTCGCGATAACTTAGAC+GGG | + | chr7_2:84601595-84601614 | None:intergenic | 45.0% | |
GTCCTTCGCGATAACTTAGA+CGG | + | chr7_2:84601596-84601615 | None:intergenic | 45.0% | |
ATAGTGTGTCATAATCGCGG+GGG | + | chr7_2:84601620-84601639 | None:intergenic | 45.0% | |
GATAGTGTGTCATAATCGCG+GGG | + | chr7_2:84601621-84601640 | None:intergenic | 45.0% | |
CGCGATTATGACACACTATC+TGG | - | chr7_2:84601621-84601640 | Msa1084320:CDS | 45.0% | |
TCCCGATATAGAGAGGCTTA+TGG | - | chr7_2:84601846-84601865 | Msa1084320:intron | 45.0% | |
ACTGCATGAACGTTGTTTGG+AGG | + | chr7_2:84601886-84601905 | None:intergenic | 45.0% | |
AGGACTGCATGAACGTTGTT+TGG | + | chr7_2:84601889-84601908 | None:intergenic | 45.0% | |
TGTTGTGTATCAGGCTCTCT+TGG | - | chr7_2:84602144-84602163 | Msa1084320:intron | 45.0% | |
GGTGGTGATTACTTATCTCG+TGG | - | chr7_2:84602201-84602220 | Msa1084320:intron | 45.0% | |
ATTCTGCTGGTGGTTTAGGT+TGG | - | chr7_2:84602305-84602324 | Msa1084320:intron | 45.0% | |
!! | AGTTATATGAGTGGTAGCGG+TGG | - | chr7_2:84602380-84602399 | Msa1084320:intron | 45.0% |
ATCTTCGACGTCATCCCATT+GGG | + | chr7_2:84602488-84602507 | None:intergenic | 45.0% | |
AATCTTCGACGTCATCCCAT+TGG | + | chr7_2:84602489-84602508 | None:intergenic | 45.0% | |
!! | TCTTCAAAATGACGGGCATC+AGG | + | chr7_2:84602602-84602621 | None:intergenic | 45.0% |
CTTTCCAAATGAACAGAGCC+AGG | + | chr7_2:84602811-84602830 | None:intergenic | 45.0% | |
!! | TTATAGTATTTATAAAATTA+GGG | + | chr7_2:84598642-84598661 | None:intergenic | 5.0% |
!! | ATTATAGTATTTATAAAATT+AGG | + | chr7_2:84598643-84598662 | None:intergenic | 5.0% |
AGCGGTGAAAAGAGGTTCTG+CGG | - | chr7_2:84597717-84597736 | Msa1084320:three_prime_UTR | 50.0% | |
TTCTGCGGCAAAGAAAGCCA+AGG | - | chr7_2:84597732-84597751 | Msa1084320:three_prime_UTR | 50.0% | |
TCATGTTCTTGATGCTGCGG+TGG | - | chr7_2:84597828-84597847 | Msa1084320:intron | 50.0% | |
AGTGCCTAATGGTGTAGCTC+TGG | - | chr7_2:84597870-84597889 | Msa1084320:intron | 50.0% | |
TCCACCAGAGCTACACCATT+AGG | + | chr7_2:84597877-84597896 | None:intergenic | 50.0% | |
TCCATGATCGCAGGAAACAG+CGG | + | chr7_2:84598246-84598265 | None:intergenic | 50.0% | |
!! | CGATCATGGATTGGCAACGT+TGG | - | chr7_2:84598256-84598275 | Msa1084320:intron | 50.0% |
TTCCAAAGTACACCAAGGGC+TGG | + | chr7_2:84598364-84598383 | None:intergenic | 50.0% | |
!!! | CGAGAGTGTTTTGATCGGGA+TGG | - | chr7_2:84598674-84598693 | Msa1084320:intron | 50.0% |
TCAGGAGATCGAAGGTGAAG+TGG | - | chr7_2:84598863-84598882 | Msa1084320:three_prime_UTR | 50.0% | |
GATGACGAAGAGGGTGATAC+AGG | - | chr7_2:84598909-84598928 | Msa1084320:three_prime_UTR | 50.0% | |
AGAGGGTGATACAGGTGATG+AGG | - | chr7_2:84598917-84598936 | Msa1084320:three_prime_UTR | 50.0% | |
! | TGATGATGAGCATGCCAGTG+AGG | - | chr7_2:84599001-84599020 | Msa1084320:three_prime_UTR | 50.0% |
AACGGAAACGCAGAAGCAGA+AGG | - | chr7_2:84599079-84599098 | Msa1084320:intron | 50.0% | |
! | ATTTGTTGGGGGCCTAGACA+AGG | - | chr7_2:84599112-84599131 | Msa1084320:intron | 50.0% |
GCTCTGTAGCATCCTTGTCT+AGG | + | chr7_2:84599127-84599146 | None:intergenic | 50.0% | |
ATTCAACGTCGTCCTGGCTT+CGG | + | chr7_2:84599189-84599208 | None:intergenic | 50.0% | |
TCTATTTCGTGCCGCCTTCA+AGG | - | chr7_2:84599493-84599512 | Msa1084320:three_prime_UTR | 50.0% | |
AAGCATTACTCGGGCCTTGA+AGG | + | chr7_2:84599510-84599529 | None:intergenic | 50.0% | |
!! | TGGAGTTGATAAACCTGCCG+AGG | - | chr7_2:84599764-84599783 | Msa1084320:intron | 50.0% |
TTTGCAAAGGAAACCTCGGC+AGG | + | chr7_2:84599780-84599799 | None:intergenic | 50.0% | |
TCAGGCCCTTGACAAAAGCA+AGG | + | chr7_2:84599861-84599880 | None:intergenic | 50.0% | |
TCGTTTGGGAATTGGGCCAT+CGG | - | chr7_2:84599922-84599941 | Msa1084320:intron | 50.0% | |
GTGGCTGACTGTTGGACATA+TGG | - | chr7_2:84600547-84600566 | Msa1084320:three_prime_UTR | 50.0% | |
!! | GAGCTTGCTAAGAACATGCC+AGG | - | chr7_2:84600753-84600772 | Msa1084320:three_prime_UTR | 50.0% |
TAATTCTTCCTGCGAGCACC+TGG | + | chr7_2:84600774-84600793 | None:intergenic | 50.0% | |
GGTGCTCGCAGGAAGAATTA+TGG | - | chr7_2:84600774-84600793 | Msa1084320:intron | 50.0% | |
!! | CTGAGAGCATTACCAGTGCA+GGG | - | chr7_2:84600838-84600857 | Msa1084320:intron | 50.0% |
AGCATTACCAGTGCAGGGTT+AGG | - | chr7_2:84600843-84600862 | Msa1084320:intron | 50.0% | |
AGACCTCTTCCGAAAGTTCG+TGG | - | chr7_2:84600987-84601006 | Msa1084320:three_prime_UTR | 50.0% | |
GAGAGATTATGGTCGACCTG+TGG | - | chr7_2:84601368-84601387 | Msa1084320:CDS | 50.0% | |
ACGTATCCCTATGCAGGTCA+GGG | + | chr7_2:84601497-84601516 | None:intergenic | 50.0% | |
TACGAGACGTATCCCTATGC+AGG | + | chr7_2:84601503-84601522 | None:intergenic | 50.0% | |
ATACGTCTCGTACTGCACCA+AGG | - | chr7_2:84601511-84601530 | Msa1084320:CDS | 50.0% | |
TCATCCAGATAACCCCTCCT+TGG | + | chr7_2:84601531-84601550 | None:intergenic | 50.0% | |
AGGAGGGGTTATCTGGATGA+TGG | - | chr7_2:84601531-84601550 | Msa1084320:CDS | 50.0% | |
CCTTCGCGATAACTTAGACG+GGG | + | chr7_2:84601594-84601613 | None:intergenic | 50.0% | |
GAAACGTCCTTATGCTGCCA+TGG | - | chr7_2:84601647-84601666 | Msa1084320:intron | 50.0% | |
GACTATGACTATGGAGGCAG+TGG | - | chr7_2:84601822-84601841 | Msa1084320:intron | 50.0% | |
CAGTGGTTCCCGATATAGAG+AGG | - | chr7_2:84601839-84601858 | Msa1084320:intron | 50.0% | |
!! | GAACAACAGGATCAGGTTGG+AGG | + | chr7_2:84601909-84601928 | None:intergenic | 50.0% |
AGTCGACAGGAACCGAGTTA+TGG | - | chr7_2:84602039-84602058 | Msa1084320:intron | 50.0% | |
TGTGTATCAGGCTCTCTTGG+TGG | - | chr7_2:84602147-84602166 | Msa1084320:intron | 50.0% | |
! | GCTCTCTTGGTGGTAGTGAT+GGG | - | chr7_2:84602157-84602176 | Msa1084320:intron | 50.0% |
! | CTCTCTTGGTGGTAGTGATG+GGG | - | chr7_2:84602158-84602177 | Msa1084320:intron | 50.0% |
! | TCTCTTGGTGGTAGTGATGG+GGG | - | chr7_2:84602159-84602178 | Msa1084320:intron | 50.0% |
!! | TATATGAGTGGTAGCGGTGG+TGG | - | chr7_2:84602383-84602402 | Msa1084320:intron | 50.0% |
AAGATTGCAGACCTGGTCAC+CGG | - | chr7_2:84602503-84602522 | Msa1084320:CDS | 50.0% | |
AGACAAATTCACCGGTGACC+AGG | + | chr7_2:84602517-84602536 | None:intergenic | 50.0% | |
!! | AGCTCCTGGCTCTGTTCATT+TGG | - | chr7_2:84602804-84602823 | Msa1084320:five_prime_UTR | 50.0% |
CCAAACCATGCCTCCGAAAG+CGG | - | chr7_2:84597699-84597718 | Msa1084320:three_prime_UTR | 55.0% | |
TTTCACCGCTTTCGGAGGCA+TGG | + | chr7_2:84597707-84597726 | None:intergenic | 55.0% | |
! | CCTCTTTTCACCGCTTTCGG+AGG | + | chr7_2:84597712-84597731 | None:intergenic | 55.0% |
CCTCCGAAAGCGGTGAAAAG+AGG | - | chr7_2:84597709-84597728 | Msa1084320:three_prime_UTR | 55.0% | |
TGTTCTTGATGCTGCGGTGG+AGG | - | chr7_2:84597831-84597850 | Msa1084320:intron | 55.0% | |
!! | GCCTAATGGTGTAGCTCTGG+TGG | - | chr7_2:84597873-84597892 | Msa1084320:intron | 55.0% |
! | ACCGCTGTTTCCTGCGATCA+TGG | - | chr7_2:84598242-84598261 | Msa1084320:intron | 55.0% |
CGTTGCCAATCCATGATCGC+AGG | + | chr7_2:84598255-84598274 | None:intergenic | 55.0% | |
TGACATGTTCCACCAGCCCT+TGG | - | chr7_2:84598349-84598368 | Msa1084320:three_prime_UTR | 55.0% | |
CAAAGTACACCAAGGGCTGG+TGG | + | chr7_2:84598361-84598380 | None:intergenic | 55.0% | |
! | CACCAGCCCTTGGTGTACTT+TGG | - | chr7_2:84598359-84598378 | Msa1084320:three_prime_UTR | 55.0% |
TCTCATGTGATGCGGGATGC+TGG | - | chr7_2:84598594-84598613 | Msa1084320:intron | 55.0% | |
GGAGATCGAAGGTGAAGTGG+AGG | - | chr7_2:84598866-84598885 | Msa1084320:three_prime_UTR | 55.0% | |
CTCATGCACGTTCTCCTCAC+TGG | + | chr7_2:84599018-84599037 | None:intergenic | 55.0% | |
GGAGAACGTGCATGAGCATC+TGG | - | chr7_2:84599022-84599041 | Msa1084320:intron | 55.0% | |
TTGGGGAGATTACCGAAGCC+AGG | - | chr7_2:84599174-84599193 | Msa1084320:three_prime_UTR | 55.0% | |
CTGAGGATTCAACGTCGTCC+TGG | + | chr7_2:84599195-84599214 | None:intergenic | 55.0% | |
CATTACTCGGGCCTTGAAGG+CGG | + | chr7_2:84599507-84599526 | None:intergenic | 55.0% | |
! | ACCTAGTCTACTCTGGAGGC+TGG | - | chr7_2:84600104-84600123 | Msa1084320:intron | 55.0% |
TCCAGCCTCCAGAGTAGACT+AGG | + | chr7_2:84600108-84600127 | None:intergenic | 55.0% | |
!! | GCTGAGAGCATTACCAGTGC+AGG | - | chr7_2:84600837-84600856 | Msa1084320:intron | 55.0% |
ACCAGTGCAGGGTTAGGTGA+AGG | - | chr7_2:84600849-84600868 | Msa1084320:intron | 55.0% | |
! | ACATGAGCAGGTCGACTCTG+TGG | + | chr7_2:84601107-84601126 | None:intergenic | 55.0% |
!! | CTTACAGGCATCGACGTGAC+AGG | + | chr7_2:84601191-84601210 | None:intergenic | 55.0% |
CGTCGATGCCTGTAAGAGCT+AGG | - | chr7_2:84601195-84601214 | Msa1084320:CDS | 55.0% | |
GTAGGATCTAGCTGGAGGAG+AGG | + | chr7_2:84601225-84601244 | None:intergenic | 55.0% | |
CTCCTCCAGCTAGATCCTAC+AGG | - | chr7_2:84601225-84601244 | Msa1084320:CDS | 55.0% | |
CTCCTGTAGGATCTAGCTGG+AGG | + | chr7_2:84601230-84601249 | None:intergenic | 55.0% | |
GATTATCCAGCCCGTGACTC+TGG | - | chr7_2:84601468-84601487 | Msa1084320:CDS | 55.0% | |
TGGCTACCCTGACCTGCATA+GGG | - | chr7_2:84601488-84601507 | Msa1084320:CDS | 55.0% | |
GACGTATCCCTATGCAGGTC+AGG | + | chr7_2:84601498-84601517 | None:intergenic | 55.0% | |
GTCTCGTACTGCACCAAGGA+GGG | - | chr7_2:84601515-84601534 | Msa1084320:CDS | 55.0% | |
TCTCGTACTGCACCAAGGAG+GGG | - | chr7_2:84601516-84601535 | Msa1084320:CDS | 55.0% | |
TGCACCAAGGAGGGGTTATC+TGG | - | chr7_2:84601524-84601543 | Msa1084320:CDS | 55.0% | |
CGATAACTTAGACGGGGAGG+TGG | + | chr7_2:84601588-84601607 | None:intergenic | 55.0% | |
TCGCGATAACTTAGACGGGG+AGG | + | chr7_2:84601591-84601610 | None:intergenic | 55.0% | |
CCCCGTCTAAGTTATCGCGA+AGG | - | chr7_2:84601591-84601610 | Msa1084320:CDS | 55.0% | |
TCTCCACGGTATGCTGATGC+TGG | - | chr7_2:84601774-84601793 | Msa1084320:intron | 55.0% | |
TGGGGCATATAGCAGTCGAC+AGG | - | chr7_2:84602026-84602045 | Msa1084320:intron | 55.0% | |
CAGGAACCGAGTTATGGCAG+AGG | - | chr7_2:84602045-84602064 | Msa1084320:intron | 55.0% | |
! | GGCTCTCTTGGTGGTAGTGA+TGG | - | chr7_2:84602156-84602175 | Msa1084320:intron | 55.0% |
!! | CTGCTGGTGGTTTAGGTTGG+TGG | - | chr7_2:84602308-84602327 | Msa1084320:intron | 55.0% |
GACGTCGAAGATTGCAGACC+TGG | - | chr7_2:84602496-84602515 | Msa1084320:CDS | 55.0% | |
! | TGTAACAGGCTGGCTGCTGT+TGG | - | chr7_2:84602550-84602569 | Msa1084320:CDS | 55.0% |
! | CCGCTTTCGGAGGCATGGTT+TGG | + | chr7_2:84597702-84597721 | None:intergenic | 60.0% |
GACGAGGGTCAGGAGATCGA+AGG | - | chr7_2:84598855-84598874 | Msa1084320:three_prime_UTR | 60.0% | |
AGAACATGCCAGGTGCTCGC+AGG | - | chr7_2:84600763-84600782 | Msa1084320:intron | 60.0% | |
TGGTACGCATGCTGCTGCTG+TGG | - | chr7_2:84600809-84600828 | Msa1084320:intron | 60.0% | |
GCCTTCACCTAACCCTGCAC+TGG | + | chr7_2:84600853-84600872 | None:intergenic | 60.0% | |
GGTGCAGGTCGACTACGTGA+AGG | + | chr7_2:84601068-84601087 | None:intergenic | 60.0% | |
TGTGGTGCAGGTCGACTACG+TGG | + | chr7_2:84601089-84601108 | None:intergenic | 60.0% | |
!! | GAGGCTGGCCTAGCTCTTAC+AGG | + | chr7_2:84601206-84601225 | None:intergenic | 60.0% |
GATCTAGCTGGAGGAGAGGC+TGG | + | chr7_2:84601221-84601240 | None:intergenic | 60.0% | |
CTTGGAGGTGGCAGATCCAC+AGG | + | chr7_2:84601387-84601406 | None:intergenic | 60.0% | |
GTCAGGGTAGCCAGAGTCAC+GGG | + | chr7_2:84601481-84601500 | None:intergenic | 60.0% | |
GGTCAGGGTAGCCAGAGTCA+CGG | + | chr7_2:84601482-84601501 | None:intergenic | 60.0% | |
CTGGCTACCCTGACCTGCAT+AGG | - | chr7_2:84601487-84601506 | Msa1084320:CDS | 60.0% | |
CGTCTCGTACTGCACCAAGG+AGG | - | chr7_2:84601514-84601533 | Msa1084320:CDS | 60.0% | |
CTTAGACGGGGAGGTGGAGA+AGG | + | chr7_2:84601582-84601601 | None:intergenic | 60.0% | |
GCACCAGCATCAGCATACCG+TGG | + | chr7_2:84601780-84601799 | None:intergenic | 60.0% | |
GCAGGTCGACTACGTGGTGC+AGG | + | chr7_2:84601083-84601102 | None:intergenic | 65.0% | |
! | GCAGGTCGACTCTGTGGTGC+AGG | + | chr7_2:84601101-84601120 | None:intergenic | 65.0% |
AGACGGGGAGGTGGAGAAGG+AGG | + | chr7_2:84601579-84601598 | None:intergenic | 65.0% | |
GGGTAGCCAGAGTCACGGGC+TGG | + | chr7_2:84601477-84601496 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 84597489 | 84602884 | 84597489 | ID=Msa1084320;Name=Msa1084320 |
chr7_2 | mRNA | 84597489 | 84602884 | 84597489 | ID=Msa1084320-mRNA-1;Parent=Msa1084320;Name=Msa1084320-mRNA-1;_AED=0.07;_eAED=0.07;_QI=217|1|1|1|0.8|0.72|11|1923|275 |
chr7_2 | exon | 84597489 | 84597815 | 84597489 | ID=Msa1084320-mRNA-1:exon:22683;Parent=Msa1084320-mRNA-1 |
chr7_2 | exon | 84597948 | 84598050 | 84597948 | ID=Msa1084320-mRNA-1:exon:22682;Parent=Msa1084320-mRNA-1 |
chr7_2 | exon | 84598143 | 84598216 | 84598143 | ID=Msa1084320-mRNA-1:exon:22681;Parent=Msa1084320-mRNA-1 |
chr7_2 | exon | 84598307 | 84598413 | 84598307 | ID=Msa1084320-mRNA-1:exon:22680;Parent=Msa1084320-mRNA-1 |
chr7_2 | exon | 84598499 | 84598608 | 84598499 | ID=Msa1084320-mRNA-1:exon:22679;Parent=Msa1084320-mRNA-1 |
chr7_2 | exon | 84598705 | 84599030 | 84598705 | ID=Msa1084320-mRNA-1:exon:22678;Parent=Msa1084320-mRNA-1 |
chr7_2 | exon | 84599116 | 84599410 | 84599116 | ID=Msa1084320-mRNA-1:exon:22677;Parent=Msa1084320-mRNA-1 |
chr7_2 | exon | 84599492 | 84599713 | 84599492 | ID=Msa1084320-mRNA-1:exon:22676;Parent=Msa1084320-mRNA-1 |
chr7_2 | exon | 84600537 | 84600776 | 84600537 | ID=Msa1084320-mRNA-1:exon:22675;Parent=Msa1084320-mRNA-1 |
chr7_2 | exon | 84600899 | 84601652 | 84600899 | ID=Msa1084320-mRNA-1:exon:22674;Parent=Msa1084320-mRNA-1 |
chr7_2 | exon | 84602475 | 84602884 | 84602475 | ID=Msa1084320-mRNA-1:exon:22673;Parent=Msa1084320-mRNA-1 |
chr7_2 | five_prime_UTR | 84602668 | 84602884 | 84602668 | ID=Msa1084320-mRNA-1:five_prime_utr;Parent=Msa1084320-mRNA-1 |
chr7_2 | CDS | 84602475 | 84602667 | 84602475 | ID=Msa1084320-mRNA-1:cds;Parent=Msa1084320-mRNA-1 |
chr7_2 | CDS | 84601018 | 84601652 | 84601018 | ID=Msa1084320-mRNA-1:cds;Parent=Msa1084320-mRNA-1 |
chr7_2 | three_prime_UTR | 84600899 | 84601017 | 84600899 | ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1 |
chr7_2 | three_prime_UTR | 84600537 | 84600776 | 84600537 | ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1 |
chr7_2 | three_prime_UTR | 84599492 | 84599713 | 84599492 | ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1 |
chr7_2 | three_prime_UTR | 84599116 | 84599410 | 84599116 | ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1 |
chr7_2 | three_prime_UTR | 84598705 | 84599030 | 84598705 | ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1 |
chr7_2 | three_prime_UTR | 84598499 | 84598608 | 84598499 | ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1 |
chr7_2 | three_prime_UTR | 84598307 | 84598413 | 84598307 | ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1 |
chr7_2 | three_prime_UTR | 84598143 | 84598216 | 84598143 | ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1 |
chr7_2 | three_prime_UTR | 84597948 | 84598050 | 84597948 | ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1 |
chr7_2 | three_prime_UTR | 84597489 | 84597815 | 84597489 | ID=Msa1084320-mRNA-1:three_prime_utr;Parent=Msa1084320-mRNA-1 |
Gene Sequence |
Protein sequence |