AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0687230


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0687230 MtrunA17_Chr4g0037531 85.564 381 5 6 1 334 1 378 0.0 596
Msa0687230 MtrunA17_Chr8g0381521 32.692 312 118 11 39 290 33 312 1.58e-14 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0687230 AT4G38710.1 46.455 409 134 19 1 336 1 397 1.86e-52 180
Msa0687230 AT4G38710.2 47.089 395 124 19 1 322 1 383 2.20e-51 177

Find 145 sgRNAs with CRISPR-Local

Find 439 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGGCAGTTTCAGTATTTA+TGG 0.149490 4_4:-52038693 Msa0687230:three_prime_UTR
GGGGTTCTGGTTCGGGTTCT+AGG 0.179677 4_4:-52040404 Msa0687230:CDS
GTGTTGGTGGTGGGTTTGAT+AGG 0.223609 4_4:-52040134 Msa0687230:CDS
GAGAGAGGTGGAGGTGGAGG+TGG 0.250977 4_4:-52040249 Msa0687230:CDS
TGGCGGTGAACTGCTGGTTT+TGG 0.260167 4_4:-52038598 Msa0687230:three_prime_UTR
TCGAGATGGGGTTCTGGTTC+GGG 0.281585 4_4:-52040411 Msa0687230:CDS
TCTGGTGGTGGTGTTGGTGG+TGG 0.292406 4_4:-52040144 Msa0687230:CDS
ACTGCAGTGGTTGAAGGATT+TGG 0.315084 4_4:-52039763 Msa0687230:CDS
AGAGAATCGAGTCGTGATTC+GGG 0.316526 4_4:-52040348 Msa0687230:CDS
TGCAGTCTCCTTAATCTTCA+TGG 0.319993 4_4:+52039780 None:intergenic
GGATTTGGAAAGAGGGGTTT+TGG 0.320358 4_4:-52039748 Msa0687230:CDS
TTCGAGATGGGGTTCTGGTT+CGG 0.320995 4_4:-52040412 Msa0687230:CDS
CTGGTGGTGGTGTTGGTGGT+GGG 0.336609 4_4:-52040143 Msa0687230:CDS
AGAAGGGAGAGAGGTGGAGG+TGG 0.338435 4_4:-52040255 Msa0687230:intron
GGGCTGATGAGATTGATAAT+TGG 0.339903 4_4:-52040317 Msa0687230:CDS
AGGGAGAGAGGTGGAGGTGG+AGG 0.344195 4_4:-52040252 Msa0687230:CDS
GCTTGAGACCATGAAGATTA+AGG 0.344368 4_4:-52039788 Msa0687230:CDS
TTGTGAGACACGACTAAAAC+TGG 0.348819 4_4:-52038748 Msa0687230:three_prime_UTR
TTTGGTTCTGGTGGTGGTGT+TGG 0.351519 4_4:-52040150 Msa0687230:CDS
TAGAGAATCGAGTCGTGATT+CGG 0.353727 4_4:-52040349 Msa0687230:CDS
TCTGTTTCGAGATGGGGTTC+TGG 0.360395 4_4:-52040417 Msa0687230:CDS
CCATCGGAGGGACGGAGATT+TGG 0.361330 4_4:-52040168 Msa0687230:CDS
TAAACCGGTTTCTTCTTATA+CGG 0.361675 4_4:-52040571 Msa0687230:CDS
GGTTCTGGTGGTGGTGTTGG+TGG 0.373335 4_4:-52040147 Msa0687230:CDS
CAGTGAACTCAGCCAAACTT+AGG 0.376657 4_4:+52040595 None:intergenic
ATCGATTTGAGAGGAGTTGG+AGG 0.377945 4_4:-52039702 Msa0687230:CDS
CGGAGATTTGGTTCTGGTGG+TGG 0.383874 4_4:-52040156 Msa0687230:CDS
GTGGTGGTGGTGGAAGGCCT+AGG 0.384246 4_4:-52039999 Msa0687230:CDS
AAAGTAGGGTTTGGTGTTAG+TGG 0.385027 4_4:-52040105 Msa0687230:CDS
TTCTTATACGGCTCAAGATC+CGG 0.391165 4_4:-52040559 Msa0687230:intron
GGATAGTTGGGTTTCGAGTA+AGG 0.394999 4_4:-52040193 Msa0687230:CDS
GAAAGCACAAACCCTAAGTT+TGG 0.395026 4_4:-52040607 Msa0687230:CDS
AGAAGACTGTTGTTGGGAAT+GGG 0.399511 4_4:-52040284 Msa0687230:intron
GGTTCTAGGGTTTCTGAGGA+TGG 0.401684 4_4:-52040390 Msa0687230:CDS
AAGTTCAGCTTCGTGTTCTT+CGG 0.404600 4_4:+52040725 None:intergenic
GGCTGATGGATCGGATAGTT+GGG 0.409771 4_4:-52040205 Msa0687230:CDS
AAGTGCCCATGCACCTGGTT+TGG 0.409980 4_4:+52040752 None:intergenic
TTTGATAGGGAGAGGAAAGT+AGG 0.414560 4_4:-52040120 Msa0687230:CDS
GCCGGTGAGTAATGAAAATC+AGG 0.418244 4_4:-52039953 Msa0687230:CDS
GGGCTGATGGATCGGATAGT+TGG 0.418883 4_4:-52040206 Msa0687230:CDS
GAGAGAAGGGAGAGAGGTGG+AGG 0.422798 4_4:-52040258 Msa0687230:intron
AACCGCTGAGGAACTTGAAC+GGG 0.429895 4_4:-52040508 Msa0687230:CDS
TCTGAGGATGGGAGAAGGAA+TGG 0.430363 4_4:-52040378 Msa0687230:CDS
AAGAAGACTGTTGTTGGGAA+TGG 0.438952 4_4:-52040285 Msa0687230:CDS
AAGATCGATTTGAGAGGAGT+TGG 0.439369 4_4:-52039705 Msa0687230:CDS
CTGAGGATGGGAGAAGGAAT+GGG 0.440534 4_4:-52040377 Msa0687230:CDS
GATAGGTATGTTGGTAGCTT+AGG 0.442428 4_4:-52038711 Msa0687230:three_prime_UTR
TTGATAGGGAGAGGAAAGTA+GGG 0.443677 4_4:-52040119 Msa0687230:CDS
AAGGAGACTGCAGTGGTTGA+AGG 0.444170 4_4:-52039769 Msa0687230:CDS
GGCTGAGTTCACTGCTAAAC+CGG 0.448280 4_4:-52040586 Msa0687230:CDS
TGTTGGTGGTGGGTTTGATA+GGG 0.451230 4_4:-52040133 Msa0687230:CDS
AGGGAATTCAGCAAGTGGTT+TGG 0.453142 4_4:+52040668 None:intergenic
TGAGAGTTCTGTTTCGAGAT+GGG 0.454620 4_4:-52040424 Msa0687230:CDS
AGAGAGGTGGAGGTGGAGGT+GGG 0.455658 4_4:-52040248 Msa0687230:CDS
GGCTGATGAGATTGATAATT+GGG 0.455921 4_4:-52040316 Msa0687230:CDS
ACGGCAGTGGTGGTGGTGGA+AGG 0.456467 4_4:-52040005 Msa0687230:CDS
GGGTTTGAGAGAAGGGAGAG+AGG 0.458141 4_4:-52040264 Msa0687230:intron
TTACTCACCGGCGCTGTTCG+TGG 0.461906 4_4:+52039964 None:intergenic
GCTGGGAAGAAGACTGTTGT+TGG 0.463116 4_4:-52040291 Msa0687230:CDS
AGTGAACTCAGCCAAACTTA+GGG 0.476224 4_4:+52040596 None:intergenic
GAGGGACGGAGATTTGGTTC+TGG 0.476898 4_4:-52040162 Msa0687230:CDS
GTTGGTAACGGCAGTGGTGG+TGG 0.477421 4_4:-52040012 Msa0687230:CDS
GATTCGCAGTCACGGGCTGA+TGG 0.478762 4_4:-52040219 Msa0687230:CDS
GAGATTGATAATTGGGCTGC+TGG 0.479488 4_4:-52040309 Msa0687230:CDS
AACTTGAACGGGACCGGACT+AGG 0.483014 4_4:-52040497 Msa0687230:CDS
AGGGAGAGGAAAGTAGGGTT+TGG 0.486006 4_4:-52040114 Msa0687230:CDS
TGGTTGAAGGATTTGGAAAG+AGG 0.486516 4_4:-52039756 Msa0687230:CDS
GGGTTCTGGTTCGGGTTCTA+GGG 0.490463 4_4:-52040403 Msa0687230:CDS
TAAGCATGGCGGTGAACTGC+TGG 0.496133 4_4:-52038604 Msa0687230:three_prime_UTR
TCGTGATTCGGGGCCGTCGA+GGG 0.496272 4_4:-52040337 Msa0687230:CDS
CTGAGGAACTTGAACGGGAC+CGG 0.496953 4_4:-52040503 Msa0687230:CDS
CCATCATCAGATGGTGATGA+TGG 0.497883 4_4:+52039670 None:intergenic
GAATCAAGTGCCCATGCACC+TGG 0.498322 4_4:+52040747 None:intergenic
CTTGGTCCAAACCAGGTGCA+TGG 0.500565 4_4:-52040758 Msa0687230:CDS
TAGCTGAATGTTACCGTGAT+CGG 0.501966 4_4:-52038661 Msa0687230:three_prime_UTR
TGGCTGAGAAAGGTCAGGAT+TGG 0.507073 4_4:-52039828 Msa0687230:CDS
TTTGAGAGAAGGGAGAGAGG+TGG 0.508237 4_4:-52040261 Msa0687230:intron
GATCTTACGGTGATAGGGAC+AGG 0.510939 4_4:-52040458 Msa0687230:CDS
TTTGGTTCTGGCAATGGACG+CGG 0.512581 4_4:-52039730 Msa0687230:CDS
GGTTGAAGGATTTGGAAAGA+GGG 0.514378 4_4:-52039755 Msa0687230:CDS
AAGAAAGGTGAATTCAGTGT+TGG 0.515274 4_4:-52040054 Msa0687230:intron
AGATAGGTTGACAAGGGAGT+TGG 0.518601 4_4:-52038845 Msa0687230:three_prime_UTR
CTGGGAAGAAGACTGTTGTT+GGG 0.525187 4_4:-52040290 Msa0687230:CDS
GAACGGGACCGGACTAGGAT+TGG 0.526589 4_4:-52040492 Msa0687230:CDS
GCTGTTGCTACTAATACTAA+TGG 0.527495 4_4:-52039928 Msa0687230:CDS
ATGAGAGTTCTGTTTCGAGA+TGG 0.535167 4_4:-52040425 Msa0687230:CDS
TTTGGTTTCAACAACGTTGT+TGG 0.536441 4_4:+52040686 None:intergenic
AACCACCACCAATCCTAGTC+CGG 0.537944 4_4:+52040484 None:intergenic
CGTGGTTGCAAAACAAGCCT+AGG 0.538727 4_4:+52039982 None:intergenic
GTGGTGGGTTTGATAGGGAG+AGG 0.544767 4_4:-52040128 Msa0687230:CDS
TGAGCCGTATAAGAAGAAAC+CGG 0.545095 4_4:+52040567 None:intergenic
GAGAATGTTGGTAACGGCAG+TGG 0.545752 4_4:-52040018 Msa0687230:CDS
CGGCGGCAACAGCGAGGGAA+GGG 0.546251 4_4:+52040649 None:intergenic
CCATCATCACCATCTGATGA+TGG 0.547253 4_4:-52039670 Msa0687230:CDS
GGTAACGGCAGTGGTGGTGG+TGG 0.549406 4_4:-52040009 Msa0687230:CDS
AGTGAGAGAAACGAGAATGT+TGG 0.551147 4_4:-52040030 Msa0687230:CDS
GAGAGTTCTGTTTCGAGATG+GGG 0.551992 4_4:-52040423 Msa0687230:CDS
CTGATGATGGTCGTTCTGAA+AGG 0.553189 4_4:-52039657 Msa0687230:intron
GTTCTAGGGTTTCTGAGGAT+GGG 0.553840 4_4:-52040389 Msa0687230:CDS
TTGGTCCAAACCAGGTGCAT+GGG 0.554652 4_4:-52040757 Msa0687230:CDS
ATAATGTAGTGCTGAGAAAG+TGG 0.555432 4_4:-52038921 Msa0687230:intron
GGTTTCAACAACGTTGTTGG+TGG 0.557431 4_4:+52040689 None:intergenic
GCAGTCACGGGCTGATGGAT+CGG 0.557550 4_4:-52040214 Msa0687230:CDS
CCAAATCTCCGTCCCTCCGA+TGG 0.559164 4_4:+52040168 None:intergenic
TTCGGGTTCTAGGGTTTCTG+AGG 0.561999 4_4:-52040394 Msa0687230:CDS
GCGGCGGCAACAGCGAGGGA+AGG 0.562888 4_4:+52040648 None:intergenic
GTATCTGCTTGGTCCAAACC+AGG 0.566929 4_4:-52040765 Msa0687230:CDS
TTTGTATAACAGTATAAGCA+TGG 0.567946 4_4:-52038618 Msa0687230:three_prime_UTR
GTTGAAGGATTTGGAAAGAG+GGG 0.569718 4_4:-52039754 Msa0687230:CDS
GTCGTGATTCGGGGCCGTCG+AGG 0.571331 4_4:-52040338 Msa0687230:CDS
TCCCTTGTCAACCTATCTGT+AGG 0.571991 4_4:+52038850 None:intergenic
CCCTTGTCAACCTATCTGTA+GGG 0.572514 4_4:+52038851 None:intergenic
GTAGGGTTTGGTGTTAGTGG+TGG 0.575486 4_4:-52040102 Msa0687230:intron
TTCGAGTAAGGTGCCATCGG+AGG 0.575693 4_4:-52040181 Msa0687230:CDS
TGGCGGCTACTGTATCTGCT+TGG 0.576953 4_4:-52040776 Msa0687230:CDS
TTTGCAACCACGAACAGCGC+CGG 0.580290 4_4:-52039971 Msa0687230:CDS
CGGGACCGGACTAGGATTGG+TGG 0.584241 4_4:-52040489 Msa0687230:CDS
AGATTGATAATTGGGCTGCT+GGG 0.584666 4_4:-52040308 Msa0687230:CDS
GGGTTTCTGAGGATGGGAGA+AGG 0.596947 4_4:-52040383 Msa0687230:CDS
GTAAGGTGCCATCGGAGGGA+CGG 0.598505 4_4:-52040176 Msa0687230:CDS
TCGAGTAAGGTGCCATCGGA+GGG 0.598520 4_4:-52040180 Msa0687230:CDS
GGTTTCGAGTAAGGTGCCAT+CGG 0.599540 4_4:-52040184 Msa0687230:CDS
GGACGGAGATTTGGTTCTGG+TGG 0.601916 4_4:-52040159 Msa0687230:CDS
GACCGGACTAGGATTGGTGG+TGG 0.603483 4_4:-52040486 Msa0687230:CDS
AGGATGGGAGAAGGAATGGG+AGG 0.603895 4_4:-52040374 Msa0687230:CDS
TGTTGCGGCGGCAACAGCGA+GGG 0.606576 4_4:+52040644 None:intergenic
GGATGGGAGAAGGAATGGGA+GGG 0.609433 4_4:-52040373 Msa0687230:CDS
GAACCGCTGAGGAACTTGAA+CGG 0.623722 4_4:-52040509 Msa0687230:CDS
TCAGAACGACCATCATCAGA+TGG 0.633335 4_4:+52039661 None:intergenic
ATGTAGTGCTGAGAAAGTGG+AGG 0.635329 4_4:-52038918 Msa0687230:intron
TTGTTGCGGCGGCAACAGCG+AGG 0.637895 4_4:+52040643 None:intergenic
AATGTTGGTAACGGCAGTGG+TGG 0.640974 4_4:-52040015 Msa0687230:CDS
GAGAATCGAGTCGTGATTCG+GGG 0.642199 4_4:-52040347 Msa0687230:CDS
AGAAACGAGAATGTTGGTAA+CGG 0.642254 4_4:-52040024 Msa0687230:CDS
TCAATCTCATCAGCCCTCGA+CGG 0.643798 4_4:+52040324 None:intergenic
TCCCTACAGATAGGTTGACA+AGG 0.646039 4_4:-52038852 Msa0687230:three_prime_UTR
AGGGAAGGGAATTCAGCAAG+TGG 0.646892 4_4:+52040663 None:intergenic
CCCTACAGATAGGTTGACAA+GGG 0.658068 4_4:-52038851 Msa0687230:three_prime_UTR
TCCACGTCAGCGAACCGCTG+AGG 0.659911 4_4:-52040520 Msa0687230:intron
ACGGTGATAGGGACAGGACA+AGG 0.665375 4_4:-52040452 Msa0687230:CDS
GTTGCTACTAATACTAATGG+TGG 0.672658 4_4:-52039925 Msa0687230:CDS
GAAGATTAAGGAGACTGCAG+TGG 0.680724 4_4:-52039776 Msa0687230:CDS
GTCCCGTTCAAGTTCCTCAG+CGG 0.684186 4_4:+52040506 None:intergenic
GCGGTGAAGATCGATTTGAG+AGG 0.702801 4_4:-52039711 Msa0687230:CDS
GTATAACAGTATAAGCATGG+CGG 0.758282 4_4:-52038615 Msa0687230:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGATATTATATAAAGT+AGG + chr4_4:52039908-52039927 None:intergenic 10.0%
!! ATATCAATAAAAAAAATACA+GGG + chr4_4:52040719-52040738 None:intergenic 10.0%
!! AATATCAATAAAAAAAATAC+AGG + chr4_4:52040720-52040739 None:intergenic 10.0%
!!! TTTTTGATATTATATAAAGT+AGG + chr4_4:52039908-52039927 None:intergenic 10.0%
!! ATATCAATAAAAAAAATACA+GGG + chr4_4:52040719-52040738 None:intergenic 10.0%
!! AATATCAATAAAAAAAATAC+AGG + chr4_4:52040720-52040739 None:intergenic 10.0%
!!! ATAATTAGGTTTTTTAGTGA+TGG - chr4_4:52039741-52039760 Msa0687230:CDS 20.0%
!!! ACAAGAAAAACAAATCATTT+TGG + chr4_4:52039875-52039894 None:intergenic 20.0%
!! TGTTCATAAATCTCAAAAAT+TGG + chr4_4:52040004-52040023 None:intergenic 20.0%
!! AAACTGAATTGAACATTTAT+TGG - chr4_4:52040103-52040122 Msa0687230:CDS 20.0%
!! AGTAAAAACAAAACTTCAAT+GGG + chr4_4:52040489-52040508 None:intergenic 20.0%
!! AAGTAAAAACAAAACTTCAA+TGG + chr4_4:52040490-52040509 None:intergenic 20.0%
!!! ATAATTAGGTTTTTTAGTGA+TGG - chr4_4:52039741-52039760 Msa0687230:CDS 20.0%
!!! ACAAGAAAAACAAATCATTT+TGG + chr4_4:52039875-52039894 None:intergenic 20.0%
!! TGTTCATAAATCTCAAAAAT+TGG + chr4_4:52040004-52040023 None:intergenic 20.0%
!! AAACTGAATTGAACATTTAT+TGG - chr4_4:52040103-52040122 Msa0687230:CDS 20.0%
!! AGTAAAAACAAAACTTCAAT+GGG + chr4_4:52040489-52040508 None:intergenic 20.0%
!! AAGTAAAAACAAAACTTCAA+TGG + chr4_4:52040490-52040509 None:intergenic 20.0%
! GATAATTGGAATAAGAAGAA+AGG - chr4_4:52039201-52039220 Msa0687230:intron 25.0%
!!! TAGTGTTTTGAGCTATAATT+AGG - chr4_4:52039727-52039746 Msa0687230:CDS 25.0%
!!! ATGTATGTACTTTTTCTTTG+TGG - chr4_4:52039956-52039975 Msa0687230:CDS 25.0%
!! TGTGGTATCTAAACAATTTT+TGG - chr4_4:52039974-52039993 Msa0687230:CDS 25.0%
! AAATGTTCAATTCAGTTTGA+AGG + chr4_4:52040101-52040120 None:intergenic 25.0%
! CTTAGATTGTATTGTCTATT+TGG - chr4_4:52040251-52040270 Msa0687230:CDS 25.0%
!! TGGTAAAAGACATTTTTGAT+AGG - chr4_4:52040542-52040561 Msa0687230:intron 25.0%
! TTTGTATAACAGTATAAGCA+TGG - chr4_4:52040652-52040671 Msa0687230:CDS 25.0%
! GATAATTGGAATAAGAAGAA+AGG - chr4_4:52039201-52039220 Msa0687230:intron 25.0%
!!! TAGTGTTTTGAGCTATAATT+AGG - chr4_4:52039727-52039746 Msa0687230:CDS 25.0%
!!! ATGTATGTACTTTTTCTTTG+TGG - chr4_4:52039956-52039975 Msa0687230:CDS 25.0%
!! TGTGGTATCTAAACAATTTT+TGG - chr4_4:52039974-52039993 Msa0687230:CDS 25.0%
! AAATGTTCAATTCAGTTTGA+AGG + chr4_4:52040101-52040120 None:intergenic 25.0%
! CTTAGATTGTATTGTCTATT+TGG - chr4_4:52040251-52040270 Msa0687230:CDS 25.0%
!! TGGTAAAAGACATTTTTGAT+AGG - chr4_4:52040542-52040561 Msa0687230:intron 25.0%
! TTTGTATAACAGTATAAGCA+TGG - chr4_4:52040652-52040671 Msa0687230:CDS 25.0%
!!! CTTCTTTTTAGGTTTTGTTG+CGG + chr4_4:52038644-52038663 None:intergenic 30.0%
! GTTTGTGCTTTCTTCTTTTT+AGG + chr4_4:52038655-52038674 None:intergenic 30.0%
! TAAACCGGTTTCTTCTTATA+CGG - chr4_4:52038699-52038718 Msa0687230:three_prime_UTR 30.0%
! TTTTAGATCTTACGGTGATA+GGG - chr4_4:52038807-52038826 Msa0687230:three_prime_UTR 30.0%
!! GTTTGTTACCAATAACGTTT+TGG - chr4_4:52039635-52039654 Msa0687230:intron 30.0%
TATTGCATCCAAAACGTTAT+TGG + chr4_4:52039646-52039665 None:intergenic 30.0%
GTTGTTGTAAAACTTAGCTT+CGG - chr4_4:52040043-52040062 Msa0687230:CDS 30.0%
!!! TACTTTTTCTTGTCTTTGTG+AGG - chr4_4:52040132-52040151 Msa0687230:CDS 30.0%
CTTAGACTGTATTGTCTATT+TGG - chr4_4:52040302-52040321 Msa0687230:CDS 30.0%
!! TTACTTTTATCCCTACAGAT+AGG - chr4_4:52040409-52040428 Msa0687230:CDS 30.0%
! GACATTTTTGATAGGTATGT+TGG - chr4_4:52040550-52040569 Msa0687230:intron 30.0%
TTAGGCAGTTTCAGTATTTA+TGG - chr4_4:52040577-52040596 Msa0687230:CDS 30.0%
!! GATGAAATTTTAACCGATCA+CGG + chr4_4:52040625-52040644 None:intergenic 30.0%
!!! CTTCTTTTTAGGTTTTGTTG+CGG + chr4_4:52038644-52038663 None:intergenic 30.0%
! GTTTGTGCTTTCTTCTTTTT+AGG + chr4_4:52038655-52038674 None:intergenic 30.0%
! TAAACCGGTTTCTTCTTATA+CGG - chr4_4:52038699-52038718 Msa0687230:three_prime_UTR 30.0%
! TTTTAGATCTTACGGTGATA+GGG - chr4_4:52038807-52038826 Msa0687230:three_prime_UTR 30.0%
!! GTTTGTTACCAATAACGTTT+TGG - chr4_4:52039635-52039654 Msa0687230:intron 30.0%
TATTGCATCCAAAACGTTAT+TGG + chr4_4:52039646-52039665 None:intergenic 30.0%
GTTGTTGTAAAACTTAGCTT+CGG - chr4_4:52040043-52040062 Msa0687230:CDS 30.0%
!!! TACTTTTTCTTGTCTTTGTG+AGG - chr4_4:52040132-52040151 Msa0687230:CDS 30.0%
CTTAGACTGTATTGTCTATT+TGG - chr4_4:52040302-52040321 Msa0687230:CDS 30.0%
!! TTACTTTTATCCCTACAGAT+AGG - chr4_4:52040409-52040428 Msa0687230:CDS 30.0%
! GACATTTTTGATAGGTATGT+TGG - chr4_4:52040550-52040569 Msa0687230:intron 30.0%
TTAGGCAGTTTCAGTATTTA+TGG - chr4_4:52040577-52040596 Msa0687230:CDS 30.0%
!! GATGAAATTTTAACCGATCA+CGG + chr4_4:52040625-52040644 None:intergenic 30.0%
! TTTGGTTTCAACAACGTTGT+TGG + chr4_4:52038587-52038606 None:intergenic 35.0%
!! GTTTTAGATCTTACGGTGAT+AGG - chr4_4:52038806-52038825 Msa0687230:three_prime_UTR 35.0%
! GGCTGATGAGATTGATAATT+GGG - chr4_4:52038954-52038973 Msa0687230:intron 35.0%
AAGAAAGGTGAATTCAGTGT+TGG - chr4_4:52039216-52039235 Msa0687230:intron 35.0%
! AGAAACGAGAATGTTGGTAA+CGG - chr4_4:52039246-52039265 Msa0687230:intron 35.0%
! TCCTGATTTTCATTACTCAC+CGG + chr4_4:52039321-52039340 None:intergenic 35.0%
GCTGTTGCTACTAATACTAA+TGG - chr4_4:52039342-52039361 Msa0687230:intron 35.0%
GTTGCTACTAATACTAATGG+TGG - chr4_4:52039345-52039364 Msa0687230:intron 35.0%
! GCTAAGTTTTACAACAACAC+AGG + chr4_4:52040041-52040060 None:intergenic 35.0%
TTCTTGTCTTTGTGAGGATT+TGG - chr4_4:52040138-52040157 Msa0687230:CDS 35.0%
! AGGATTTGGTTGTTAAGTAG+TGG - chr4_4:52040152-52040171 Msa0687230:CDS 35.0%
! ATAATGTAGTGCTGAGAAAG+TGG - chr4_4:52040349-52040368 Msa0687230:CDS 35.0%
GTATAACAGTATAAGCATGG+CGG - chr4_4:52040655-52040674 Msa0687230:CDS 35.0%
! TTTGGTTTCAACAACGTTGT+TGG + chr4_4:52038587-52038606 None:intergenic 35.0%
!! GTTTTAGATCTTACGGTGAT+AGG - chr4_4:52038806-52038825 Msa0687230:three_prime_UTR 35.0%
! GGCTGATGAGATTGATAATT+GGG - chr4_4:52038954-52038973 Msa0687230:intron 35.0%
AAGAAAGGTGAATTCAGTGT+TGG - chr4_4:52039216-52039235 Msa0687230:intron 35.0%
! AGAAACGAGAATGTTGGTAA+CGG - chr4_4:52039246-52039265 Msa0687230:intron 35.0%
! TCCTGATTTTCATTACTCAC+CGG + chr4_4:52039321-52039340 None:intergenic 35.0%
GCTGTTGCTACTAATACTAA+TGG - chr4_4:52039342-52039361 Msa0687230:intron 35.0%
GTTGCTACTAATACTAATGG+TGG - chr4_4:52039345-52039364 Msa0687230:intron 35.0%
! GCTAAGTTTTACAACAACAC+AGG + chr4_4:52040041-52040060 None:intergenic 35.0%
TTCTTGTCTTTGTGAGGATT+TGG - chr4_4:52040138-52040157 Msa0687230:CDS 35.0%
! AGGATTTGGTTGTTAAGTAG+TGG - chr4_4:52040152-52040171 Msa0687230:CDS 35.0%
! ATAATGTAGTGCTGAGAAAG+TGG - chr4_4:52040349-52040368 Msa0687230:CDS 35.0%
GTATAACAGTATAAGCATGG+CGG - chr4_4:52040655-52040674 Msa0687230:CDS 35.0%
AAGTTCAGCTTCGTGTTCTT+CGG + chr4_4:52038548-52038567 None:intergenic 40.0%
!!! CTTTTTAGGTTTTGTTGCGG+CGG + chr4_4:52038641-52038660 None:intergenic 40.0%
! GAAAGCACAAACCCTAAGTT+TGG - chr4_4:52038663-52038682 Msa0687230:three_prime_UTR 40.0%
AGTGAACTCAGCCAAACTTA+GGG + chr4_4:52038677-52038696 None:intergenic 40.0%
TGAGCCGTATAAGAAGAAAC+CGG + chr4_4:52038706-52038725 None:intergenic 40.0%
TTCTTATACGGCTCAAGATC+CGG - chr4_4:52038711-52038730 Msa0687230:three_prime_UTR 40.0%
!!! GGTGGTGGTTTTAGATCTTA+CGG - chr4_4:52038799-52038818 Msa0687230:three_prime_UTR 40.0%
ATGAGAGTTCTGTTTCGAGA+TGG - chr4_4:52038845-52038864 Msa0687230:three_prime_UTR 40.0%
TGAGAGTTCTGTTTCGAGAT+GGG - chr4_4:52038846-52038865 Msa0687230:three_prime_UTR 40.0%
TAGAGAATCGAGTCGTGATT+CGG - chr4_4:52038921-52038940 Msa0687230:intron 40.0%
! GGGCTGATGAGATTGATAAT+TGG - chr4_4:52038953-52038972 Msa0687230:intron 40.0%
! AGATTGATAATTGGGCTGCT+GGG - chr4_4:52038962-52038981 Msa0687230:intron 40.0%
AAGAAGACTGTTGTTGGGAA+TGG - chr4_4:52038985-52039004 Msa0687230:intron 40.0%
AGAAGACTGTTGTTGGGAAT+GGG - chr4_4:52038986-52039005 Msa0687230:intron 40.0%
!!! GGTTTTTTGATTCGCAGTCA+CGG - chr4_4:52039043-52039062 Msa0687230:intron 40.0%
!!! GTTTTTTGATTCGCAGTCAC+GGG - chr4_4:52039044-52039063 Msa0687230:intron 40.0%
TTTGATAGGGAGAGGAAAGT+AGG - chr4_4:52039150-52039169 Msa0687230:intron 40.0%
TTGATAGGGAGAGGAAAGTA+GGG - chr4_4:52039151-52039170 Msa0687230:intron 40.0%
!! AAAGTAGGGTTTGGTGTTAG+TGG - chr4_4:52039165-52039184 Msa0687230:intron 40.0%
AGTGAGAGAAACGAGAATGT+TGG - chr4_4:52039240-52039259 Msa0687230:intron 40.0%
!! ACTAATGGTGGTGTTGTTTC+TGG - chr4_4:52039357-52039376 Msa0687230:intron 40.0%
!! CTAATGGTGGTGTTGTTTCT+GGG - chr4_4:52039358-52039377 Msa0687230:intron 40.0%
TGGGAATATAGCTAAGCCTA+AGG - chr4_4:52039377-52039396 Msa0687230:intron 40.0%
GGGAATATAGCTAAGCCTAA+GGG - chr4_4:52039378-52039397 Msa0687230:intron 40.0%
GCTTGAGACCATGAAGATTA+AGG - chr4_4:52039482-52039501 Msa0687230:intron 40.0%
TGCAGTCTCCTTAATCTTCA+TGG + chr4_4:52039493-52039512 None:intergenic 40.0%
TGGTTGAAGGATTTGGAAAG+AGG - chr4_4:52039514-52039533 Msa0687230:intron 40.0%
GGTTGAAGGATTTGGAAAGA+GGG - chr4_4:52039515-52039534 Msa0687230:intron 40.0%
GTTGAAGGATTTGGAAAGAG+GGG - chr4_4:52039516-52039535 Msa0687230:intron 40.0%
!! AAGATCGATTTGAGAGGAGT+TGG - chr4_4:52039565-52039584 Msa0687230:intron 40.0%
CATCACAAAGCACATCACAT+TGG + chr4_4:52039807-52039826 None:intergenic 40.0%
CAATGTGATGTGCTTTGTGA+TGG - chr4_4:52039805-52039824 Msa0687230:CDS 40.0%
GTTCAATTCAGTTTGAAGGC+AGG + chr4_4:52040097-52040116 None:intergenic 40.0%
TTGTGAGACACGACTAAAAC+TGG - chr4_4:52040522-52040541 Msa0687230:intron 40.0%
!! GATAGGTATGTTGGTAGCTT+AGG - chr4_4:52040559-52040578 Msa0687230:intron 40.0%
TAGCTGAATGTTACCGTGAT+CGG - chr4_4:52040609-52040628 Msa0687230:CDS 40.0%
AAGTTCAGCTTCGTGTTCTT+CGG + chr4_4:52038548-52038567 None:intergenic 40.0%
!!! CTTTTTAGGTTTTGTTGCGG+CGG + chr4_4:52038641-52038660 None:intergenic 40.0%
! GAAAGCACAAACCCTAAGTT+TGG - chr4_4:52038663-52038682 Msa0687230:three_prime_UTR 40.0%
AGTGAACTCAGCCAAACTTA+GGG + chr4_4:52038677-52038696 None:intergenic 40.0%
TGAGCCGTATAAGAAGAAAC+CGG + chr4_4:52038706-52038725 None:intergenic 40.0%
TTCTTATACGGCTCAAGATC+CGG - chr4_4:52038711-52038730 Msa0687230:three_prime_UTR 40.0%
!!! GGTGGTGGTTTTAGATCTTA+CGG - chr4_4:52038799-52038818 Msa0687230:three_prime_UTR 40.0%
ATGAGAGTTCTGTTTCGAGA+TGG - chr4_4:52038845-52038864 Msa0687230:three_prime_UTR 40.0%
TGAGAGTTCTGTTTCGAGAT+GGG - chr4_4:52038846-52038865 Msa0687230:three_prime_UTR 40.0%
TAGAGAATCGAGTCGTGATT+CGG - chr4_4:52038921-52038940 Msa0687230:intron 40.0%
! GGGCTGATGAGATTGATAAT+TGG - chr4_4:52038953-52038972 Msa0687230:intron 40.0%
! AGATTGATAATTGGGCTGCT+GGG - chr4_4:52038962-52038981 Msa0687230:intron 40.0%
AAGAAGACTGTTGTTGGGAA+TGG - chr4_4:52038985-52039004 Msa0687230:intron 40.0%
AGAAGACTGTTGTTGGGAAT+GGG - chr4_4:52038986-52039005 Msa0687230:intron 40.0%
!!! GGTTTTTTGATTCGCAGTCA+CGG - chr4_4:52039043-52039062 Msa0687230:intron 40.0%
!!! GTTTTTTGATTCGCAGTCAC+GGG - chr4_4:52039044-52039063 Msa0687230:intron 40.0%
TTTGATAGGGAGAGGAAAGT+AGG - chr4_4:52039150-52039169 Msa0687230:intron 40.0%
TTGATAGGGAGAGGAAAGTA+GGG - chr4_4:52039151-52039170 Msa0687230:intron 40.0%
!! AAAGTAGGGTTTGGTGTTAG+TGG - chr4_4:52039165-52039184 Msa0687230:intron 40.0%
AGTGAGAGAAACGAGAATGT+TGG - chr4_4:52039240-52039259 Msa0687230:intron 40.0%
!! ACTAATGGTGGTGTTGTTTC+TGG - chr4_4:52039357-52039376 Msa0687230:intron 40.0%
!! CTAATGGTGGTGTTGTTTCT+GGG - chr4_4:52039358-52039377 Msa0687230:intron 40.0%
TGGGAATATAGCTAAGCCTA+AGG - chr4_4:52039377-52039396 Msa0687230:intron 40.0%
GGGAATATAGCTAAGCCTAA+GGG - chr4_4:52039378-52039397 Msa0687230:intron 40.0%
GCTTGAGACCATGAAGATTA+AGG - chr4_4:52039482-52039501 Msa0687230:intron 40.0%
TGCAGTCTCCTTAATCTTCA+TGG + chr4_4:52039493-52039512 None:intergenic 40.0%
TGGTTGAAGGATTTGGAAAG+AGG - chr4_4:52039514-52039533 Msa0687230:intron 40.0%
GGTTGAAGGATTTGGAAAGA+GGG - chr4_4:52039515-52039534 Msa0687230:intron 40.0%
GTTGAAGGATTTGGAAAGAG+GGG - chr4_4:52039516-52039535 Msa0687230:intron 40.0%
!! AAGATCGATTTGAGAGGAGT+TGG - chr4_4:52039565-52039584 Msa0687230:intron 40.0%
CATCACAAAGCACATCACAT+TGG + chr4_4:52039807-52039826 None:intergenic 40.0%
CAATGTGATGTGCTTTGTGA+TGG - chr4_4:52039805-52039824 Msa0687230:CDS 40.0%
GTTCAATTCAGTTTGAAGGC+AGG + chr4_4:52040097-52040116 None:intergenic 40.0%
TTGTGAGACACGACTAAAAC+TGG - chr4_4:52040522-52040541 Msa0687230:intron 40.0%
!! GATAGGTATGTTGGTAGCTT+AGG - chr4_4:52040559-52040578 Msa0687230:intron 40.0%
TAGCTGAATGTTACCGTGAT+CGG - chr4_4:52040609-52040628 Msa0687230:CDS 40.0%
GGTTTCAACAACGTTGTTGG+TGG + chr4_4:52038584-52038603 None:intergenic 45.0%
AGGGAATTCAGCAAGTGGTT+TGG + chr4_4:52038605-52038624 None:intergenic 45.0%
CAGTGAACTCAGCCAAACTT+AGG + chr4_4:52038678-52038697 None:intergenic 45.0%
GAGAGTTCTGTTTCGAGATG+GGG - chr4_4:52038847-52038866 Msa0687230:three_prime_UTR 45.0%
!! GTTCTAGGGTTTCTGAGGAT+GGG - chr4_4:52038881-52038900 Msa0687230:exon 45.0%
AGAGAATCGAGTCGTGATTC+GGG - chr4_4:52038922-52038941 Msa0687230:intron 45.0%
! GAGATTGATAATTGGGCTGC+TGG - chr4_4:52038961-52038980 Msa0687230:intron 45.0%
CTGGGAAGAAGACTGTTGTT+GGG - chr4_4:52038980-52038999 Msa0687230:intron 45.0%
! TTGGGAATGGGTTTGAGAGA+AGG - chr4_4:52038998-52039017 Msa0687230:intron 45.0%
! TGGGAATGGGTTTGAGAGAA+GGG - chr4_4:52038999-52039018 Msa0687230:intron 45.0%
! GGATAGTTGGGTTTCGAGTA+AGG - chr4_4:52039077-52039096 Msa0687230:intron 45.0%
!! TGTTGGTGGTGGGTTTGATA+GGG - chr4_4:52039137-52039156 Msa0687230:intron 45.0%
GCCGGTGAGTAATGAAAATC+AGG - chr4_4:52039317-52039336 Msa0687230:intron 45.0%
GAAGATTAAGGAGACTGCAG+TGG - chr4_4:52039494-52039513 Msa0687230:intron 45.0%
ACTGCAGTGGTTGAAGGATT+TGG - chr4_4:52039507-52039526 Msa0687230:intron 45.0%
! GGATTTGGAAAGAGGGGTTT+TGG - chr4_4:52039522-52039541 Msa0687230:intron 45.0%
!! ATCGATTTGAGAGGAGTTGG+AGG - chr4_4:52039568-52039587 Msa0687230:intron 45.0%
! CCATCATCAGATGGTGATGA+TGG + chr4_4:52039603-52039622 None:intergenic 45.0%
CCATCATCACCATCTGATGA+TGG - chr4_4:52039600-52039619 Msa0687230:intron 45.0%
TCAGAACGACCATCATCAGA+TGG + chr4_4:52039612-52039631 None:intergenic 45.0%
!! CTGATGATGGTCGTTCTGAA+AGG - chr4_4:52039613-52039632 Msa0687230:intron 45.0%
AATTCAGTTTGAAGGCAGGC+AGG + chr4_4:52040093-52040112 None:intergenic 45.0%
!! AGTAGTGGTGCTGTCTCTTA+TGG - chr4_4:52040167-52040186 Msa0687230:CDS 45.0%
! ATGTAGTGCTGAGAAAGTGG+AGG - chr4_4:52040352-52040371 Msa0687230:CDS 45.0%
! TCCCTACAGATAGGTTGACA+AGG - chr4_4:52040418-52040437 Msa0687230:CDS 45.0%
CCCTTGTCAACCTATCTGTA+GGG + chr4_4:52040422-52040441 None:intergenic 45.0%
! CCCTACAGATAGGTTGACAA+GGG - chr4_4:52040419-52040438 Msa0687230:CDS 45.0%
TCCCTTGTCAACCTATCTGT+AGG + chr4_4:52040423-52040442 None:intergenic 45.0%
! AGATAGGTTGACAAGGGAGT+TGG - chr4_4:52040425-52040444 Msa0687230:CDS 45.0%
!!! TGCTGGTTTTGGGATTCATG+TGG - chr4_4:52040683-52040702 Msa0687230:CDS 45.0%
GGTTTCAACAACGTTGTTGG+TGG + chr4_4:52038584-52038603 None:intergenic 45.0%
AGGGAATTCAGCAAGTGGTT+TGG + chr4_4:52038605-52038624 None:intergenic 45.0%
CAGTGAACTCAGCCAAACTT+AGG + chr4_4:52038678-52038697 None:intergenic 45.0%
GAGAGTTCTGTTTCGAGATG+GGG - chr4_4:52038847-52038866 Msa0687230:three_prime_UTR 45.0%
!! GTTCTAGGGTTTCTGAGGAT+GGG - chr4_4:52038881-52038900 Msa0687230:exon 45.0%
AGAGAATCGAGTCGTGATTC+GGG - chr4_4:52038922-52038941 Msa0687230:intron 45.0%
! GAGATTGATAATTGGGCTGC+TGG - chr4_4:52038961-52038980 Msa0687230:intron 45.0%
CTGGGAAGAAGACTGTTGTT+GGG - chr4_4:52038980-52038999 Msa0687230:intron 45.0%
! TTGGGAATGGGTTTGAGAGA+AGG - chr4_4:52038998-52039017 Msa0687230:intron 45.0%
! TGGGAATGGGTTTGAGAGAA+GGG - chr4_4:52038999-52039018 Msa0687230:intron 45.0%
! GGATAGTTGGGTTTCGAGTA+AGG - chr4_4:52039077-52039096 Msa0687230:intron 45.0%
!! TGTTGGTGGTGGGTTTGATA+GGG - chr4_4:52039137-52039156 Msa0687230:intron 45.0%
GCCGGTGAGTAATGAAAATC+AGG - chr4_4:52039317-52039336 Msa0687230:intron 45.0%
GAAGATTAAGGAGACTGCAG+TGG - chr4_4:52039494-52039513 Msa0687230:intron 45.0%
ACTGCAGTGGTTGAAGGATT+TGG - chr4_4:52039507-52039526 Msa0687230:intron 45.0%
! GGATTTGGAAAGAGGGGTTT+TGG - chr4_4:52039522-52039541 Msa0687230:intron 45.0%
!! ATCGATTTGAGAGGAGTTGG+AGG - chr4_4:52039568-52039587 Msa0687230:intron 45.0%
! CCATCATCAGATGGTGATGA+TGG + chr4_4:52039603-52039622 None:intergenic 45.0%
CCATCATCACCATCTGATGA+TGG - chr4_4:52039600-52039619 Msa0687230:intron 45.0%
TCAGAACGACCATCATCAGA+TGG + chr4_4:52039612-52039631 None:intergenic 45.0%
!! CTGATGATGGTCGTTCTGAA+AGG - chr4_4:52039613-52039632 Msa0687230:intron 45.0%
AATTCAGTTTGAAGGCAGGC+AGG + chr4_4:52040093-52040112 None:intergenic 45.0%
!! AGTAGTGGTGCTGTCTCTTA+TGG - chr4_4:52040167-52040186 Msa0687230:CDS 45.0%
! ATGTAGTGCTGAGAAAGTGG+AGG - chr4_4:52040352-52040371 Msa0687230:CDS 45.0%
! TCCCTACAGATAGGTTGACA+AGG - chr4_4:52040418-52040437 Msa0687230:CDS 45.0%
CCCTTGTCAACCTATCTGTA+GGG + chr4_4:52040422-52040441 None:intergenic 45.0%
! CCCTACAGATAGGTTGACAA+GGG - chr4_4:52040419-52040438 Msa0687230:CDS 45.0%
TCCCTTGTCAACCTATCTGT+AGG + chr4_4:52040423-52040442 None:intergenic 45.0%
! AGATAGGTTGACAAGGGAGT+TGG - chr4_4:52040425-52040444 Msa0687230:CDS 45.0%
!!! TGCTGGTTTTGGGATTCATG+TGG - chr4_4:52040683-52040702 Msa0687230:CDS 45.0%
GTATCTGCTTGGTCCAAACC+AGG - chr4_4:52038505-52038524 Msa0687230:three_prime_UTR 50.0%
TTGGTCCAAACCAGGTGCAT+GGG - chr4_4:52038513-52038532 Msa0687230:three_prime_UTR 50.0%
AGGGAAGGGAATTCAGCAAG+TGG + chr4_4:52038610-52038629 None:intergenic 50.0%
GGCTGAGTTCACTGCTAAAC+CGG - chr4_4:52038684-52038703 Msa0687230:three_prime_UTR 50.0%
GAACCGCTGAGGAACTTGAA+CGG - chr4_4:52038761-52038780 Msa0687230:three_prime_UTR 50.0%
AACCGCTGAGGAACTTGAAC+GGG - chr4_4:52038762-52038781 Msa0687230:three_prime_UTR 50.0%
AACCACCACCAATCCTAGTC+CGG + chr4_4:52038789-52038808 None:intergenic 50.0%
GATCTTACGGTGATAGGGAC+AGG - chr4_4:52038812-52038831 Msa0687230:three_prime_UTR 50.0%
TCTGTTTCGAGATGGGGTTC+TGG - chr4_4:52038853-52038872 Msa0687230:three_prime_UTR 50.0%
! TTCGAGATGGGGTTCTGGTT+CGG - chr4_4:52038858-52038877 Msa0687230:three_prime_UTR 50.0%
!! TTCGGGTTCTAGGGTTTCTG+AGG - chr4_4:52038876-52038895 Msa0687230:exon 50.0%
!! GGTTCTAGGGTTTCTGAGGA+TGG - chr4_4:52038880-52038899 Msa0687230:exon 50.0%
TCTGAGGATGGGAGAAGGAA+TGG - chr4_4:52038892-52038911 Msa0687230:exon 50.0%
CTGAGGATGGGAGAAGGAAT+GGG - chr4_4:52038893-52038912 Msa0687230:exon 50.0%
GAGAATCGAGTCGTGATTCG+GGG - chr4_4:52038923-52038942 Msa0687230:intron 50.0%
TCAATCTCATCAGCCCTCGA+CGG + chr4_4:52038949-52038968 None:intergenic 50.0%
GCTGGGAAGAAGACTGTTGT+TGG - chr4_4:52038979-52038998 Msa0687230:intron 50.0%
TTTGAGAGAAGGGAGAGAGG+TGG - chr4_4:52039009-52039028 Msa0687230:intron 50.0%
! GGCTGATGGATCGGATAGTT+GGG - chr4_4:52039065-52039084 Msa0687230:intron 50.0%
! GGTTTCGAGTAAGGTGCCAT+CGG - chr4_4:52039086-52039105 Msa0687230:intron 50.0%
!! TTTGGTTCTGGTGGTGGTGT+TGG - chr4_4:52039120-52039139 Msa0687230:intron 50.0%
!! GTGTTGGTGGTGGGTTTGAT+AGG - chr4_4:52039136-52039155 Msa0687230:intron 50.0%
AGGGAGAGGAAAGTAGGGTT+TGG - chr4_4:52039156-52039175 Msa0687230:intron 50.0%
!! GTAGGGTTTGGTGTTAGTGG+TGG - chr4_4:52039168-52039187 Msa0687230:intron 50.0%
!! GTTTGGTGTTAGTGGTGGTG+CGG - chr4_4:52039173-52039192 Msa0687230:intron 50.0%
! TGTTAGTGGTGGTGCGGATT+CGG - chr4_4:52039179-52039198 Msa0687230:intron 50.0%
GTGGTGCGGATTCGGATAAT+TGG - chr4_4:52039187-52039206 Msa0687230:intron 50.0%
!! GAGAATGTTGGTAACGGCAG+TGG - chr4_4:52039252-52039271 Msa0687230:intron 50.0%
!! AATGTTGGTAACGGCAGTGG+TGG - chr4_4:52039255-52039274 Msa0687230:intron 50.0%
CGTGGTTGCAAAACAAGCCT+AGG + chr4_4:52039291-52039310 None:intergenic 50.0%
! CCAAACGGATTTGCACCCTT+AGG + chr4_4:52039396-52039415 None:intergenic 50.0%
! CCTAAGGGTGCAAATCCGTT+TGG - chr4_4:52039393-52039412 Msa0687230:intron 50.0%
! CAAATCCGTTTGGTGAGGCA+AGG - chr4_4:52039403-52039422 Msa0687230:intron 50.0%
!!! GAGCAGGTTTTGGCTGAGAA+AGG - chr4_4:52039432-52039451 Msa0687230:intron 50.0%
!!! GGTTTTGGCTGAGAAAGGTC+AGG - chr4_4:52039437-52039456 Msa0687230:intron 50.0%
TGGCTGAGAAAGGTCAGGAT+TGG - chr4_4:52039442-52039461 Msa0687230:intron 50.0%
AAGGAGACTGCAGTGGTTGA+AGG - chr4_4:52039501-52039520 Msa0687230:intron 50.0%
!!! GGAAAGAGGGGTTTTGGTTC+TGG - chr4_4:52039528-52039547 Msa0687230:intron 50.0%
!!! AGGGGTTTTGGTTCTGGCAA+TGG - chr4_4:52039534-52039553 Msa0687230:intron 50.0%
!! TTTGGTTCTGGCAATGGACG+CGG - chr4_4:52039540-52039559 Msa0687230:intron 50.0%
!! GCGGTGAAGATCGATTTGAG+AGG - chr4_4:52039559-52039578 Msa0687230:intron 50.0%
CAGGCAGGTTATGCAAGACT+CGG + chr4_4:52040078-52040097 None:intergenic 50.0%
!! AGTGGTGCTGTCTCTTATGG+AGG - chr4_4:52040170-52040189 Msa0687230:CDS 50.0%
GTATCTGCTTGGTCCAAACC+AGG - chr4_4:52038505-52038524 Msa0687230:three_prime_UTR 50.0%
TTGGTCCAAACCAGGTGCAT+GGG - chr4_4:52038513-52038532 Msa0687230:three_prime_UTR 50.0%
AGGGAAGGGAATTCAGCAAG+TGG + chr4_4:52038610-52038629 None:intergenic 50.0%
GGCTGAGTTCACTGCTAAAC+CGG - chr4_4:52038684-52038703 Msa0687230:three_prime_UTR 50.0%
GAACCGCTGAGGAACTTGAA+CGG - chr4_4:52038761-52038780 Msa0687230:three_prime_UTR 50.0%
AACCGCTGAGGAACTTGAAC+GGG - chr4_4:52038762-52038781 Msa0687230:three_prime_UTR 50.0%
AACCACCACCAATCCTAGTC+CGG + chr4_4:52038789-52038808 None:intergenic 50.0%
GATCTTACGGTGATAGGGAC+AGG - chr4_4:52038812-52038831 Msa0687230:three_prime_UTR 50.0%
TCTGTTTCGAGATGGGGTTC+TGG - chr4_4:52038853-52038872 Msa0687230:three_prime_UTR 50.0%
! TTCGAGATGGGGTTCTGGTT+CGG - chr4_4:52038858-52038877 Msa0687230:three_prime_UTR 50.0%
!! TTCGGGTTCTAGGGTTTCTG+AGG - chr4_4:52038876-52038895 Msa0687230:exon 50.0%
!! GGTTCTAGGGTTTCTGAGGA+TGG - chr4_4:52038880-52038899 Msa0687230:exon 50.0%
TCTGAGGATGGGAGAAGGAA+TGG - chr4_4:52038892-52038911 Msa0687230:exon 50.0%
CTGAGGATGGGAGAAGGAAT+GGG - chr4_4:52038893-52038912 Msa0687230:exon 50.0%
GAGAATCGAGTCGTGATTCG+GGG - chr4_4:52038923-52038942 Msa0687230:intron 50.0%
TCAATCTCATCAGCCCTCGA+CGG + chr4_4:52038949-52038968 None:intergenic 50.0%
GCTGGGAAGAAGACTGTTGT+TGG - chr4_4:52038979-52038998 Msa0687230:intron 50.0%
TTTGAGAGAAGGGAGAGAGG+TGG - chr4_4:52039009-52039028 Msa0687230:intron 50.0%
! GGCTGATGGATCGGATAGTT+GGG - chr4_4:52039065-52039084 Msa0687230:intron 50.0%
! GGTTTCGAGTAAGGTGCCAT+CGG - chr4_4:52039086-52039105 Msa0687230:intron 50.0%
!! TTTGGTTCTGGTGGTGGTGT+TGG - chr4_4:52039120-52039139 Msa0687230:intron 50.0%
!! GTGTTGGTGGTGGGTTTGAT+AGG - chr4_4:52039136-52039155 Msa0687230:intron 50.0%
AGGGAGAGGAAAGTAGGGTT+TGG - chr4_4:52039156-52039175 Msa0687230:intron 50.0%
!! GTAGGGTTTGGTGTTAGTGG+TGG - chr4_4:52039168-52039187 Msa0687230:intron 50.0%
!! GTTTGGTGTTAGTGGTGGTG+CGG - chr4_4:52039173-52039192 Msa0687230:intron 50.0%
! TGTTAGTGGTGGTGCGGATT+CGG - chr4_4:52039179-52039198 Msa0687230:intron 50.0%
GTGGTGCGGATTCGGATAAT+TGG - chr4_4:52039187-52039206 Msa0687230:intron 50.0%
!! GAGAATGTTGGTAACGGCAG+TGG - chr4_4:52039252-52039271 Msa0687230:intron 50.0%
!! AATGTTGGTAACGGCAGTGG+TGG - chr4_4:52039255-52039274 Msa0687230:intron 50.0%
CGTGGTTGCAAAACAAGCCT+AGG + chr4_4:52039291-52039310 None:intergenic 50.0%
! CCAAACGGATTTGCACCCTT+AGG + chr4_4:52039396-52039415 None:intergenic 50.0%
! CCTAAGGGTGCAAATCCGTT+TGG - chr4_4:52039393-52039412 Msa0687230:intron 50.0%
! CAAATCCGTTTGGTGAGGCA+AGG - chr4_4:52039403-52039422 Msa0687230:intron 50.0%
!!! GAGCAGGTTTTGGCTGAGAA+AGG - chr4_4:52039432-52039451 Msa0687230:intron 50.0%
!!! GGTTTTGGCTGAGAAAGGTC+AGG - chr4_4:52039437-52039456 Msa0687230:intron 50.0%
TGGCTGAGAAAGGTCAGGAT+TGG - chr4_4:52039442-52039461 Msa0687230:intron 50.0%
AAGGAGACTGCAGTGGTTGA+AGG - chr4_4:52039501-52039520 Msa0687230:intron 50.0%
!!! GGAAAGAGGGGTTTTGGTTC+TGG - chr4_4:52039528-52039547 Msa0687230:intron 50.0%
!!! AGGGGTTTTGGTTCTGGCAA+TGG - chr4_4:52039534-52039553 Msa0687230:intron 50.0%
!! TTTGGTTCTGGCAATGGACG+CGG - chr4_4:52039540-52039559 Msa0687230:intron 50.0%
!! GCGGTGAAGATCGATTTGAG+AGG - chr4_4:52039559-52039578 Msa0687230:intron 50.0%
CAGGCAGGTTATGCAAGACT+CGG + chr4_4:52040078-52040097 None:intergenic 50.0%
!! AGTGGTGCTGTCTCTTATGG+AGG - chr4_4:52040170-52040189 Msa0687230:CDS 50.0%
TGGCGGCTACTGTATCTGCT+TGG - chr4_4:52038494-52038513 Msa0687230:three_prime_UTR 55.0%
CTTGGTCCAAACCAGGTGCA+TGG - chr4_4:52038512-52038531 Msa0687230:three_prime_UTR 55.0%
AAGTGCCCATGCACCTGGTT+TGG + chr4_4:52038521-52038540 None:intergenic 55.0%
GAATCAAGTGCCCATGCACC+TGG + chr4_4:52038526-52038545 None:intergenic 55.0%
GATCCGGTTGATCTTCCCAC+CGG - chr4_4:52038727-52038746 Msa0687230:three_prime_UTR 55.0%
! GTCCCGTTCAAGTTCCTCAG+CGG + chr4_4:52038767-52038786 None:intergenic 55.0%
CTGAGGAACTTGAACGGGAC+CGG - chr4_4:52038767-52038786 Msa0687230:three_prime_UTR 55.0%
AACTTGAACGGGACCGGACT+AGG - chr4_4:52038773-52038792 Msa0687230:three_prime_UTR 55.0%
ACGGTGATAGGGACAGGACA+AGG - chr4_4:52038818-52038837 Msa0687230:three_prime_UTR 55.0%
!! TCGAGATGGGGTTCTGGTTC+GGG - chr4_4:52038859-52038878 Msa0687230:three_prime_UTR 55.0%
!! GGGTTCTGGTTCGGGTTCTA+GGG - chr4_4:52038867-52038886 Msa0687230:three_prime_UTR 55.0%
! GGGTTTCTGAGGATGGGAGA+AGG - chr4_4:52038887-52038906 Msa0687230:exon 55.0%
AGGATGGGAGAAGGAATGGG+AGG - chr4_4:52038896-52038915 Msa0687230:CDS 55.0%
GGATGGGAGAAGGAATGGGA+GGG - chr4_4:52038897-52038916 Msa0687230:CDS 55.0%
GGGTTTGAGAGAAGGGAGAG+AGG - chr4_4:52039006-52039025 Msa0687230:intron 55.0%
! GGGCTGATGGATCGGATAGT+TGG - chr4_4:52039064-52039083 Msa0687230:intron 55.0%
! TTCGAGTAAGGTGCCATCGG+AGG - chr4_4:52039089-52039108 Msa0687230:intron 55.0%
! TCGAGTAAGGTGCCATCGGA+GGG - chr4_4:52039090-52039109 Msa0687230:intron 55.0%
! GAGGGACGGAGATTTGGTTC+TGG - chr4_4:52039108-52039127 Msa0687230:intron 55.0%
!! GGACGGAGATTTGGTTCTGG+TGG - chr4_4:52039111-52039130 Msa0687230:intron 55.0%
!! CGGAGATTTGGTTCTGGTGG+TGG - chr4_4:52039114-52039133 Msa0687230:intron 55.0%
!! GTGGTGGGTTTGATAGGGAG+AGG - chr4_4:52039142-52039161 Msa0687230:intron 55.0%
TTTGCAACCACGAACAGCGC+CGG - chr4_4:52039299-52039318 Msa0687230:intron 55.0%
! GGGTGCAAATCCGTTTGGTG+AGG - chr4_4:52039398-52039417 Msa0687230:intron 55.0%
!! CTTGGCCTTGCCTCACCAAA+CGG + chr4_4:52039411-52039430 None:intergenic 55.0%
! GTTTGGTGAGGCAAGGCCAA+GGG - chr4_4:52039410-52039429 Msa0687230:intron 55.0%
! AAGGCCAAGGGAGCAGGTTT+TGG - chr4_4:52039422-52039441 Msa0687230:intron 55.0%
TCAGCCAAAACCTGCTCCCT+TGG + chr4_4:52039429-52039448 None:intergenic 55.0%
TAAGCATGGCGGTGAACTGC+TGG - chr4_4:52040666-52040685 Msa0687230:CDS 55.0%
!!! TGGCGGTGAACTGCTGGTTT+TGG - chr4_4:52040672-52040691 Msa0687230:CDS 55.0%
!!! GGCGGTGAACTGCTGGTTTT+GGG - chr4_4:52040673-52040692 Msa0687230:CDS 55.0%
AGCAGATACAGTAGCCGCCA+TGG + chr4_4:52038494-52038513 None:intergenic 55.0%
TGGCGGCTACTGTATCTGCT+TGG - chr4_4:52038494-52038513 Msa0687230:three_prime_UTR 55.0%
CTTGGTCCAAACCAGGTGCA+TGG - chr4_4:52038512-52038531 Msa0687230:three_prime_UTR 55.0%
AAGTGCCCATGCACCTGGTT+TGG + chr4_4:52038521-52038540 None:intergenic 55.0%
GAATCAAGTGCCCATGCACC+TGG + chr4_4:52038526-52038545 None:intergenic 55.0%
GATCCGGTTGATCTTCCCAC+CGG - chr4_4:52038727-52038746 Msa0687230:three_prime_UTR 55.0%
! GTCCCGTTCAAGTTCCTCAG+CGG + chr4_4:52038767-52038786 None:intergenic 55.0%
CTGAGGAACTTGAACGGGAC+CGG - chr4_4:52038767-52038786 Msa0687230:three_prime_UTR 55.0%
AACTTGAACGGGACCGGACT+AGG - chr4_4:52038773-52038792 Msa0687230:three_prime_UTR 55.0%
ACGGTGATAGGGACAGGACA+AGG - chr4_4:52038818-52038837 Msa0687230:three_prime_UTR 55.0%
!! TCGAGATGGGGTTCTGGTTC+GGG - chr4_4:52038859-52038878 Msa0687230:three_prime_UTR 55.0%
!! GGGTTCTGGTTCGGGTTCTA+GGG - chr4_4:52038867-52038886 Msa0687230:three_prime_UTR 55.0%
! GGGTTTCTGAGGATGGGAGA+AGG - chr4_4:52038887-52038906 Msa0687230:exon 55.0%
AGGATGGGAGAAGGAATGGG+AGG - chr4_4:52038896-52038915 Msa0687230:CDS 55.0%
GGATGGGAGAAGGAATGGGA+GGG - chr4_4:52038897-52038916 Msa0687230:CDS 55.0%
GGGTTTGAGAGAAGGGAGAG+AGG - chr4_4:52039006-52039025 Msa0687230:intron 55.0%
! GGGCTGATGGATCGGATAGT+TGG - chr4_4:52039064-52039083 Msa0687230:intron 55.0%
! TTCGAGTAAGGTGCCATCGG+AGG - chr4_4:52039089-52039108 Msa0687230:intron 55.0%
! TCGAGTAAGGTGCCATCGGA+GGG - chr4_4:52039090-52039109 Msa0687230:intron 55.0%
! GAGGGACGGAGATTTGGTTC+TGG - chr4_4:52039108-52039127 Msa0687230:intron 55.0%
!! GGACGGAGATTTGGTTCTGG+TGG - chr4_4:52039111-52039130 Msa0687230:intron 55.0%
!! CGGAGATTTGGTTCTGGTGG+TGG - chr4_4:52039114-52039133 Msa0687230:intron 55.0%
!! GTGGTGGGTTTGATAGGGAG+AGG - chr4_4:52039142-52039161 Msa0687230:intron 55.0%
TTTGCAACCACGAACAGCGC+CGG - chr4_4:52039299-52039318 Msa0687230:intron 55.0%
! GGGTGCAAATCCGTTTGGTG+AGG - chr4_4:52039398-52039417 Msa0687230:intron 55.0%
!! CTTGGCCTTGCCTCACCAAA+CGG + chr4_4:52039411-52039430 None:intergenic 55.0%
! GTTTGGTGAGGCAAGGCCAA+GGG - chr4_4:52039410-52039429 Msa0687230:intron 55.0%
! AAGGCCAAGGGAGCAGGTTT+TGG - chr4_4:52039422-52039441 Msa0687230:intron 55.0%
TCAGCCAAAACCTGCTCCCT+TGG + chr4_4:52039429-52039448 None:intergenic 55.0%
TAAGCATGGCGGTGAACTGC+TGG - chr4_4:52040666-52040685 Msa0687230:CDS 55.0%
!!! TGGCGGTGAACTGCTGGTTT+TGG - chr4_4:52040672-52040691 Msa0687230:CDS 55.0%
!!! GGCGGTGAACTGCTGGTTTT+GGG - chr4_4:52040673-52040692 Msa0687230:CDS 55.0%
GGACCGGTGGGAAGATCAAC+CGG + chr4_4:52038733-52038752 None:intergenic 60.0%
! GAACGGGACCGGACTAGGAT+TGG - chr4_4:52038778-52038797 Msa0687230:three_prime_UTR 60.0%
! GACCGGACTAGGATTGGTGG+TGG - chr4_4:52038784-52038803 Msa0687230:three_prime_UTR 60.0%
!! GGGGTTCTGGTTCGGGTTCT+AGG - chr4_4:52038866-52038885 Msa0687230:three_prime_UTR 60.0%
GAGAGAAGGGAGAGAGGTGG+AGG - chr4_4:52039012-52039031 Msa0687230:intron 60.0%
AGAAGGGAGAGAGGTGGAGG+TGG - chr4_4:52039015-52039034 Msa0687230:intron 60.0%
AGAGAGGTGGAGGTGGAGGT+GGG - chr4_4:52039022-52039041 Msa0687230:intron 60.0%
! GATTCGCAGTCACGGGCTGA+TGG - chr4_4:52039051-52039070 Msa0687230:intron 60.0%
! GCAGTCACGGGCTGATGGAT+CGG - chr4_4:52039056-52039075 Msa0687230:intron 60.0%
! GTAAGGTGCCATCGGAGGGA+CGG - chr4_4:52039094-52039113 Msa0687230:intron 60.0%
CCAAATCTCCGTCCCTCCGA+TGG + chr4_4:52039105-52039124 None:intergenic 60.0%
CCATCGGAGGGACGGAGATT+TGG - chr4_4:52039102-52039121 Msa0687230:intron 60.0%
!! GGTTCTGGTGGTGGTGTTGG+TGG - chr4_4:52039123-52039142 Msa0687230:intron 60.0%
!! TCTGGTGGTGGTGTTGGTGG+TGG - chr4_4:52039126-52039145 Msa0687230:intron 60.0%
!! CTGGTGGTGGTGTTGGTGGT+GGG - chr4_4:52039127-52039146 Msa0687230:intron 60.0%
!! GTTGGTAACGGCAGTGGTGG+TGG - chr4_4:52039258-52039277 Msa0687230:intron 60.0%
TTACTCACCGGCGCTGTTCG+TGG + chr4_4:52039309-52039328 None:intergenic 60.0%
! CGTTTGGTGAGGCAAGGCCA+AGG - chr4_4:52039409-52039428 Msa0687230:intron 60.0%
GGACCGGTGGGAAGATCAAC+CGG + chr4_4:52038733-52038752 None:intergenic 60.0%
! GAACGGGACCGGACTAGGAT+TGG - chr4_4:52038778-52038797 Msa0687230:three_prime_UTR 60.0%
! GACCGGACTAGGATTGGTGG+TGG - chr4_4:52038784-52038803 Msa0687230:three_prime_UTR 60.0%
!! GGGGTTCTGGTTCGGGTTCT+AGG - chr4_4:52038866-52038885 Msa0687230:three_prime_UTR 60.0%
GAGAGAAGGGAGAGAGGTGG+AGG - chr4_4:52039012-52039031 Msa0687230:intron 60.0%
AGAAGGGAGAGAGGTGGAGG+TGG - chr4_4:52039015-52039034 Msa0687230:intron 60.0%
AGAGAGGTGGAGGTGGAGGT+GGG - chr4_4:52039022-52039041 Msa0687230:intron 60.0%
! GATTCGCAGTCACGGGCTGA+TGG - chr4_4:52039051-52039070 Msa0687230:intron 60.0%
! GCAGTCACGGGCTGATGGAT+CGG - chr4_4:52039056-52039075 Msa0687230:intron 60.0%
! GTAAGGTGCCATCGGAGGGA+CGG - chr4_4:52039094-52039113 Msa0687230:intron 60.0%
CCAAATCTCCGTCCCTCCGA+TGG + chr4_4:52039105-52039124 None:intergenic 60.0%
CCATCGGAGGGACGGAGATT+TGG - chr4_4:52039102-52039121 Msa0687230:intron 60.0%
!! GGTTCTGGTGGTGGTGTTGG+TGG - chr4_4:52039123-52039142 Msa0687230:intron 60.0%
!! TCTGGTGGTGGTGTTGGTGG+TGG - chr4_4:52039126-52039145 Msa0687230:intron 60.0%
!! CTGGTGGTGGTGTTGGTGGT+GGG - chr4_4:52039127-52039146 Msa0687230:intron 60.0%
!! GTTGGTAACGGCAGTGGTGG+TGG - chr4_4:52039258-52039277 Msa0687230:intron 60.0%
TTACTCACCGGCGCTGTTCG+TGG + chr4_4:52039309-52039328 None:intergenic 60.0%
! CGTTTGGTGAGGCAAGGCCA+AGG - chr4_4:52039409-52039428 Msa0687230:intron 60.0%
TGTTGCGGCGGCAACAGCGA+GGG + chr4_4:52038629-52038648 None:intergenic 65.0%
TTGTTGCGGCGGCAACAGCG+AGG + chr4_4:52038630-52038649 None:intergenic 65.0%
GTTCGCTGACGTGGACCGGT+GGG + chr4_4:52038745-52038764 None:intergenic 65.0%
AGCGGTTCGCTGACGTGGAC+CGG + chr4_4:52038749-52038768 None:intergenic 65.0%
TCCACGTCAGCGAACCGCTG+AGG - chr4_4:52038750-52038769 Msa0687230:three_prime_UTR 65.0%
TCCTCAGCGGTTCGCTGACG+TGG + chr4_4:52038754-52038773 None:intergenic 65.0%
! CGGGACCGGACTAGGATTGG+TGG - chr4_4:52038781-52038800 Msa0687230:three_prime_UTR 65.0%
! TCGTGATTCGGGGCCGTCGA+GGG - chr4_4:52038933-52038952 Msa0687230:intron 65.0%
AGGGAGAGAGGTGGAGGTGG+AGG - chr4_4:52039018-52039037 Msa0687230:intron 65.0%
GAGAGAGGTGGAGGTGGAGG+TGG - chr4_4:52039021-52039040 Msa0687230:intron 65.0%
!! GGTAACGGCAGTGGTGGTGG+TGG - chr4_4:52039261-52039280 Msa0687230:intron 65.0%
!! ACGGCAGTGGTGGTGGTGGA+AGG - chr4_4:52039265-52039284 Msa0687230:intron 65.0%
!! GTGGTGGTGGTGGAAGGCCT+AGG - chr4_4:52039271-52039290 Msa0687230:intron 65.0%
TGAGGCAAGGCCAAGGGAGC+AGG - chr4_4:52039416-52039435 Msa0687230:intron 65.0%
TGTTGCGGCGGCAACAGCGA+GGG + chr4_4:52038629-52038648 None:intergenic 65.0%
TTGTTGCGGCGGCAACAGCG+AGG + chr4_4:52038630-52038649 None:intergenic 65.0%
GTTCGCTGACGTGGACCGGT+GGG + chr4_4:52038745-52038764 None:intergenic 65.0%
AGCGGTTCGCTGACGTGGAC+CGG + chr4_4:52038749-52038768 None:intergenic 65.0%
TCCACGTCAGCGAACCGCTG+AGG - chr4_4:52038750-52038769 Msa0687230:three_prime_UTR 65.0%
TCCTCAGCGGTTCGCTGACG+TGG + chr4_4:52038754-52038773 None:intergenic 65.0%
! CGGGACCGGACTAGGATTGG+TGG - chr4_4:52038781-52038800 Msa0687230:three_prime_UTR 65.0%
! TCGTGATTCGGGGCCGTCGA+GGG - chr4_4:52038933-52038952 Msa0687230:intron 65.0%
AGGGAGAGAGGTGGAGGTGG+AGG - chr4_4:52039018-52039037 Msa0687230:intron 65.0%
GAGAGAGGTGGAGGTGGAGG+TGG - chr4_4:52039021-52039040 Msa0687230:intron 65.0%
!! GGTAACGGCAGTGGTGGTGG+TGG - chr4_4:52039261-52039280 Msa0687230:intron 65.0%
!! ACGGCAGTGGTGGTGGTGGA+AGG - chr4_4:52039265-52039284 Msa0687230:intron 65.0%
!! GTGGTGGTGGTGGAAGGCCT+AGG - chr4_4:52039271-52039290 Msa0687230:intron 65.0%
TGAGGCAAGGCCAAGGGAGC+AGG - chr4_4:52039416-52039435 Msa0687230:intron 65.0%
CGGCGGCAACAGCGAGGGAA+GGG + chr4_4:52038624-52038643 None:intergenic 70.0%
GGTTCGCTGACGTGGACCGG+TGG + chr4_4:52038746-52038765 None:intergenic 70.0%
! GTCGTGATTCGGGGCCGTCG+AGG - chr4_4:52038932-52038951 Msa0687230:intron 70.0%
CGGCGGCAACAGCGAGGGAA+GGG + chr4_4:52038624-52038643 None:intergenic 70.0%
GGTTCGCTGACGTGGACCGG+TGG + chr4_4:52038746-52038765 None:intergenic 70.0%
! GTCGTGATTCGGGGCCGTCG+AGG - chr4_4:52038932-52038951 Msa0687230:intron 70.0%
GCGGCGGCAACAGCGAGGGA+AGG + chr4_4:52038625-52038644 None:intergenic 75.0%
GCGGCGGCAACAGCGAGGGA+AGG + chr4_4:52038625-52038644 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 52038493 52040799 52038493 ID=Msa0687230;Name=Msa0687230
chr4_4 mRNA 52038493 52040799 52038493 ID=Msa0687230-mRNA-1;Parent=Msa0687230;Name=Msa0687230-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.2|0.16|1|0|0|6|402|347
chr4_4 exon 52038493 52038934 52038493 ID=Msa0687230-mRNA-1:exon:13534;Parent=Msa0687230-mRNA-1
chr4_4 exon 52039658 52039854 52039658 ID=Msa0687230-mRNA-1:exon:13533;Parent=Msa0687230-mRNA-1
chr4_4 exon 52039921 52040069 52039921 ID=Msa0687230-mRNA-1:exon:13532;Parent=Msa0687230-mRNA-1
chr4_4 exon 52040103 52040272 52040103 ID=Msa0687230-mRNA-1:exon:13531;Parent=Msa0687230-mRNA-1
chr4_4 exon 52040285 52040532 52040285 ID=Msa0687230-mRNA-1:exon:13530;Parent=Msa0687230-mRNA-1
chr4_4 exon 52040560 52040799 52040560 ID=Msa0687230-mRNA-1:exon:13529;Parent=Msa0687230-mRNA-1
chr4_4 CDS 52040560 52040799 52040560 ID=Msa0687230-mRNA-1:cds;Parent=Msa0687230-mRNA-1
chr4_4 CDS 52040285 52040532 52040285 ID=Msa0687230-mRNA-1:cds;Parent=Msa0687230-mRNA-1
chr4_4 CDS 52040103 52040272 52040103 ID=Msa0687230-mRNA-1:cds;Parent=Msa0687230-mRNA-1
chr4_4 CDS 52039921 52040069 52039921 ID=Msa0687230-mRNA-1:cds;Parent=Msa0687230-mRNA-1
chr4_4 CDS 52039658 52039854 52039658 ID=Msa0687230-mRNA-1:cds;Parent=Msa0687230-mRNA-1
chr4_4 CDS 52038895 52038934 52038895 ID=Msa0687230-mRNA-1:cds;Parent=Msa0687230-mRNA-1
chr4_4 three_prime_UTR 52038493 52038894 52038493 ID=Msa0687230-mRNA-1:three_prime_utr;Parent=Msa0687230-mRNA-1
Gene Sequence

>Msa0687230

ATGGCGGCTACTGTATCTGCTTGGTCCAAACCAGGTGCATGGGCACTTGATTCCGAAGAACACGAAGCTGAACTTCTTCAACAACACACCACCAACAACGTTGTTGAAACCAAACCACTTGCTGAATTCCCTTCCCTCGCTGTTGCCGCCGCAACAAAACCTAAAAAGAAGAAAGCACAAACCCTAAGTTTGGCTGAGTTCACTGCTAAACCGGTTTCTTCTTATACGGCTCAAGATCCGCGAACCGCTGAGGAACTTGAACGGGACCGGACTAGGATTGGTGGTGGTTTTAGATCTTACGGTGATAGGGACAGGACAAGGAGTGATGAGAGTTCTGTTTCGAGATGGGGTTCTGGTTCGGGTTCTAGGGTTTCTGAGGATGGGAGAAGGAATGGGAGGGATAGAGAATCGAGTCGTGATTCGGGGCCGTCGAGGGCTGATGAGATTGATAATTGGGCTGCTGGGAAGAAGACTGTTGTTGGGAATGGGGAGAGAGGTGGAGGTGGAGGTGGGTTTTTTGATTCGCAGTCACGGGCTGATGGATCGGATAGTTGGGTTTCGAGTAAGGTGCCATCGGAGGGACGGAGATTTGGTTCTGGTGGTGGTGTTGGTGGTGGGTTTGATAGGGAGAGGAAAGTAGGGTTTGGTGTTAGTGGTGGTGAATTCAGTGTTGGAAGTGAGAGAAACGAGAATGTTGGTAACGGCAGTGGTGGTGGTGGAAGGCCTAGGCTTGTTTTGCAACCACGAACAGCGCCGGTGAGTAATGAAAATCAGGATGCTGTTGCTACTAATACTAATGGTGGTGTTGTTTTGGCTGAGAAAGGTCAGGATTGGAAGAAGATTGATGAGCAGCTTGAGACCATGAAGATTAAGGAGACTGCAGTGGTTGAAGGATTTGGAAAGAGGGGTTTTGGTTCTGGCAATGGACGCGGTGAAGATCGATTTGAGAGGAGTTGGAGGAAATCGTCTCCATCATCACCATCTGATGATGGTCGTTCTGAAAGTGCTGAGAAAGTGGAGGAAGAACACGTCGAAGAAAACTAA

Protein sequence

>Msa0687230

MAATVSAWSKPGAWALDSEEHEAELLQQHTTNNVVETKPLAEFPSLAVAAATKPKKKKAQTLSLAEFTAKPVSSYTAQDPRTAEELERDRTRIGGGFRSYGDRDRTRSDESSVSRWGSGSGSRVSEDGRRNGRDRESSRDSGPSRADEIDNWAAGKKTVVGNGERGGGGGGFFDSQSRADGSDSWVSSKVPSEGRRFGSGGGVGGGFDRERKVGFGVSGGEFSVGSERNENVGNGSGGGGRPRLVLQPRTAPVSNENQDAVATNTNGGVVLAEKGQDWKKIDEQLETMKIKETAVVEGFGKRGFGSGNGRGEDRFERSWRKSSPSSPSDDGRSESAEKVEEEHVEEN*