Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085510 | AIT93302.1 | 100.000 | 317 | 0 | 0 | 1 | 317 | 1 | 317 | 0.0 | 649 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085510 | sp|Q2MJ20|C7A12_MEDTR | 97.161 | 317 | 9 | 0 | 1 | 317 | 1 | 317 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085510 | A0A097KJD7 | 100.000 | 317 | 0 | 0 | 1 | 317 | 1 | 317 | 0.0 | 649 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0706890 | Msa1085510 | 0.979565 | 3.002422e-148 | -8.615850e-47 |
| Msa0484200 | Msa1085510 | 0.806069 | 9.837984e-50 | -8.615850e-47 |
| Msa0573120 | Msa1085510 | 0.966775 | 2.256318e-126 | -8.615850e-47 |
| Msa0573160 | Msa1085510 | 0.971514 | 2.772520e-133 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085510 | MtrunA17_Chr8g0388921 | 97.161 | 317 | 9 | 0 | 1 | 317 | 1 | 317 | 0.0 | 635 |
| Msa1085510 | MtrunA17_Chr8g0380471 | 46.926 | 309 | 157 | 2 | 7 | 315 | 13 | 314 | 8.51e-94 | 286 |
| Msa1085510 | MtrunA17_Chr8g0380931 | 35.099 | 302 | 177 | 7 | 22 | 315 | 50 | 340 | 1.68e-56 | 190 |
| Msa1085510 | MtrunA17_Chr5g0443731 | 32.990 | 291 | 194 | 1 | 27 | 317 | 22 | 311 | 4.29e-51 | 175 |
| Msa1085510 | MtrunA17_Chr3g0107511 | 30.619 | 307 | 208 | 3 | 14 | 317 | 10 | 314 | 3.33e-44 | 157 |
| Msa1085510 | MtrunA17_Chr3g0107501 | 30.526 | 285 | 196 | 2 | 33 | 317 | 32 | 314 | 2.59e-42 | 152 |
| Msa1085510 | MtrunA17_Chr5g0443401 | 30.503 | 318 | 209 | 5 | 6 | 317 | 7 | 318 | 3.59e-41 | 149 |
| Msa1085510 | MtrunA17_Chr8g0369791 | 29.073 | 313 | 205 | 7 | 5 | 317 | 8 | 303 | 6.85e-32 | 124 |
| Msa1085510 | MtrunA17_Chr8g0373441 | 28.616 | 318 | 215 | 8 | 4 | 317 | 3 | 312 | 4.61e-31 | 120 |
| Msa1085510 | MtrunA17_Chr8g0341951 | 26.774 | 310 | 206 | 7 | 11 | 309 | 6 | 305 | 7.38e-31 | 120 |
| Msa1085510 | MtrunA17_Chr8g0381551 | 25.234 | 321 | 228 | 6 | 6 | 315 | 7 | 326 | 2.38e-30 | 117 |
| Msa1085510 | MtrunA17_Chr5g0397971 | 25.424 | 295 | 211 | 4 | 26 | 317 | 20 | 308 | 1.40e-29 | 117 |
| Msa1085510 | MtrunA17_Chr8g0381571 | 25.234 | 321 | 228 | 6 | 6 | 315 | 7 | 326 | 1.60e-29 | 117 |
| Msa1085510 | MtrunA17_Chr8g0381541 | 25.077 | 323 | 230 | 6 | 6 | 317 | 7 | 328 | 1.64e-29 | 117 |
| Msa1085510 | MtrunA17_Chr3g0113321 | 29.032 | 279 | 188 | 6 | 32 | 309 | 27 | 296 | 3.06e-29 | 116 |
| Msa1085510 | MtrunA17_Chr5g0403931 | 28.115 | 313 | 205 | 7 | 5 | 310 | 9 | 308 | 3.79e-28 | 113 |
| Msa1085510 | MtrunA17_Chr1g0161671 | 24.290 | 317 | 230 | 5 | 1 | 314 | 1 | 310 | 6.20e-28 | 110 |
| Msa1085510 | MtrunA17_Chr3g0141801 | 25.309 | 324 | 223 | 7 | 2 | 315 | 8 | 322 | 1.54e-27 | 112 |
| Msa1085510 | MtrunA17_Chr5g0408181 | 29.043 | 303 | 194 | 9 | 9 | 307 | 6 | 291 | 3.28e-27 | 110 |
| Msa1085510 | MtrunA17_Chr4g0044851 | 25.000 | 272 | 194 | 3 | 34 | 305 | 37 | 298 | 1.26e-26 | 109 |
| Msa1085510 | MtrunA17_Chr7g0226771 | 26.129 | 310 | 215 | 8 | 6 | 310 | 4 | 304 | 1.42e-26 | 108 |
| Msa1085510 | MtrunA17_Chr1g0153371 | 24.606 | 317 | 228 | 6 | 1 | 315 | 1 | 308 | 3.88e-26 | 107 |
| Msa1085510 | MtrunA17_Chr7g0219961 | 26.688 | 311 | 197 | 9 | 19 | 315 | 8 | 301 | 8.31e-26 | 106 |
| Msa1085510 | MtrunA17_Chr3g0078411 | 26.861 | 309 | 206 | 10 | 9 | 315 | 12 | 302 | 8.45e-26 | 106 |
| Msa1085510 | MtrunA17_Chr4g0044841 | 25.614 | 285 | 192 | 5 | 27 | 305 | 29 | 299 | 9.12e-26 | 106 |
| Msa1085510 | MtrunA17_Chr8g0372411 | 25.263 | 285 | 205 | 4 | 35 | 317 | 40 | 318 | 2.99e-25 | 105 |
| Msa1085510 | MtrunA17_Chr6g0455461 | 25.472 | 318 | 212 | 10 | 5 | 315 | 3 | 302 | 7.83e-24 | 101 |
| Msa1085510 | MtrunA17_Chr4g0000161 | 25.589 | 297 | 195 | 8 | 24 | 309 | 35 | 316 | 7.94e-24 | 99.8 |
| Msa1085510 | MtrunA17_Chr4g0000171 | 25.448 | 279 | 200 | 5 | 34 | 309 | 43 | 316 | 1.74e-23 | 98.6 |
| Msa1085510 | MtrunA17_Chr1g0164371 | 25.249 | 301 | 209 | 7 | 9 | 307 | 20 | 306 | 3.25e-23 | 99.4 |
| Msa1085510 | MtrunA17_Chr2g0293421 | 23.875 | 289 | 212 | 5 | 33 | 317 | 44 | 328 | 8.53e-23 | 98.2 |
| Msa1085510 | MtrunA17_Chr8g0339861 | 25.090 | 279 | 201 | 5 | 34 | 309 | 45 | 318 | 8.87e-23 | 98.2 |
| Msa1085510 | MtrunA17_Chr6g0478161 | 24.055 | 291 | 209 | 5 | 27 | 315 | 43 | 323 | 2.60e-22 | 97.1 |
| Msa1085510 | MtrunA17_Chr2g0293411 | 23.390 | 295 | 208 | 7 | 33 | 317 | 40 | 326 | 8.17e-22 | 95.5 |
| Msa1085510 | MtrunA17_Chr5g0400421 | 23.345 | 287 | 213 | 6 | 33 | 315 | 44 | 327 | 6.79e-20 | 89.7 |
| Msa1085510 | MtrunA17_Chr5g0400411 | 23.509 | 285 | 214 | 4 | 33 | 315 | 44 | 326 | 1.16e-19 | 89.4 |
| Msa1085510 | MtrunA17_Chr8g0372711 | 23.701 | 308 | 226 | 5 | 3 | 307 | 14 | 315 | 6.64e-19 | 87.0 |
| Msa1085510 | MtrunA17_Chr4g0013471 | 23.529 | 289 | 209 | 7 | 25 | 309 | 36 | 316 | 5.23e-18 | 84.0 |
| Msa1085510 | MtrunA17_Chr3g0089361 | 21.846 | 325 | 228 | 9 | 6 | 317 | 8 | 319 | 6.52e-18 | 84.0 |
| Msa1085510 | MtrunA17_Chr5g0404881 | 24.454 | 229 | 161 | 4 | 6 | 229 | 8 | 229 | 2.76e-17 | 79.7 |
| Msa1085510 | MtrunA17_Chr5g0436981 | 35.106 | 94 | 60 | 1 | 28 | 121 | 22 | 114 | 2.24e-14 | 70.5 |
| Msa1085510 | MtrunA17_Chr1g0161651 | 22.581 | 279 | 173 | 5 | 34 | 271 | 43 | 319 | 6.92e-14 | 71.2 |
| Msa1085510 | MtrunA17_Chr6g0463551 | 29.365 | 126 | 77 | 2 | 199 | 317 | 14 | 134 | 1.33e-13 | 68.6 |
| Msa1085510 | MtrunA17_Chr5g0436991 | 31.579 | 133 | 85 | 3 | 177 | 309 | 22 | 148 | 5.71e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085510 | AT5G36140.1 | 55.667 | 300 | 125 | 3 | 21 | 317 | 17 | 311 | 5.13e-120 | 348 |
| Msa1085510 | AT5G36110.2 | 57.338 | 293 | 117 | 3 | 28 | 317 | 28 | 315 | 1.61e-118 | 347 |
| Msa1085510 | AT5G36110.1 | 57.338 | 293 | 117 | 3 | 28 | 317 | 28 | 315 | 4.01e-116 | 343 |
| Msa1085510 | AT1G19630.3 | 27.692 | 325 | 209 | 10 | 1 | 313 | 1 | 311 | 1.76e-31 | 122 |
| Msa1085510 | AT1G19630.2 | 28.000 | 325 | 208 | 11 | 1 | 313 | 1 | 311 | 2.70e-31 | 122 |
| Msa1085510 | AT1G19630.1 | 27.692 | 325 | 209 | 10 | 1 | 313 | 1 | 311 | 3.57e-31 | 122 |
| Msa1085510 | AT1G12740.3 | 24.116 | 311 | 227 | 4 | 10 | 317 | 4 | 308 | 1.24e-30 | 119 |
| Msa1085510 | AT5G45340.2 | 27.389 | 314 | 204 | 7 | 12 | 317 | 6 | 303 | 2.48e-30 | 119 |
| Msa1085510 | AT5G45340.1 | 27.389 | 314 | 204 | 7 | 12 | 317 | 6 | 303 | 4.41e-30 | 119 |
| Msa1085510 | AT4G19230.1 | 27.070 | 314 | 205 | 7 | 12 | 317 | 6 | 303 | 4.55e-30 | 119 |
| Msa1085510 | AT4G19230.2 | 27.070 | 314 | 205 | 7 | 12 | 317 | 6 | 303 | 5.25e-30 | 119 |
| Msa1085510 | AT1G12740.4 | 24.116 | 311 | 227 | 4 | 10 | 317 | 4 | 308 | 5.65e-30 | 119 |
| Msa1085510 | AT1G12740.1 | 24.116 | 311 | 227 | 4 | 10 | 317 | 4 | 308 | 5.66e-30 | 119 |
| Msa1085510 | AT3G19270.1 | 25.733 | 307 | 217 | 4 | 1 | 307 | 1 | 296 | 2.24e-29 | 117 |
| Msa1085510 | AT3G19270.2 | 25.902 | 305 | 215 | 4 | 1 | 305 | 1 | 294 | 2.40e-29 | 117 |
| Msa1085510 | AT3G30180.1 | 25.743 | 303 | 212 | 6 | 7 | 309 | 8 | 297 | 1.40e-27 | 112 |
| Msa1085510 | AT1G73340.1 | 24.825 | 286 | 202 | 4 | 27 | 309 | 36 | 311 | 1.50e-27 | 112 |
| Msa1085510 | AT1G12740.2 | 23.344 | 317 | 228 | 5 | 10 | 317 | 4 | 314 | 3.13e-27 | 111 |
| Msa1085510 | AT2G29090.4 | 27.018 | 285 | 196 | 5 | 32 | 315 | 47 | 320 | 3.23e-27 | 109 |
| Msa1085510 | AT4G36380.2 | 24.825 | 286 | 209 | 5 | 34 | 317 | 69 | 350 | 9.31e-27 | 109 |
| Msa1085510 | AT4G36380.1 | 25.180 | 278 | 202 | 5 | 34 | 309 | 69 | 342 | 2.87e-26 | 108 |
| Msa1085510 | AT2G29090.2 | 27.719 | 285 | 194 | 5 | 32 | 315 | 47 | 320 | 3.88e-26 | 108 |
| Msa1085510 | AT2G29090.1 | 27.719 | 285 | 194 | 5 | 32 | 315 | 47 | 320 | 3.88e-26 | 108 |
| Msa1085510 | AT3G13730.2 | 25.352 | 284 | 192 | 7 | 35 | 309 | 52 | 324 | 4.65e-26 | 107 |
| Msa1085510 | AT5G38970.3 | 25.743 | 303 | 212 | 5 | 7 | 309 | 8 | 297 | 6.00e-26 | 107 |
| Msa1085510 | AT3G13730.1 | 25.352 | 284 | 192 | 7 | 35 | 309 | 52 | 324 | 6.97e-26 | 107 |
| Msa1085510 | AT5G38970.1 | 25.743 | 303 | 212 | 5 | 7 | 309 | 8 | 297 | 1.03e-25 | 107 |
| Msa1085510 | AT3G50660.2 | 25.559 | 313 | 202 | 7 | 29 | 317 | 34 | 339 | 1.62e-25 | 106 |
| Msa1085510 | AT2G42850.2 | 26.829 | 328 | 223 | 7 | 1 | 317 | 3 | 324 | 1.95e-25 | 105 |
| Msa1085510 | AT3G50660.1 | 25.559 | 313 | 202 | 7 | 29 | 317 | 34 | 339 | 2.68e-25 | 106 |
| Msa1085510 | AT2G42850.1 | 26.829 | 328 | 223 | 7 | 1 | 317 | 3 | 324 | 8.81e-25 | 104 |
| Msa1085510 | AT2G32440.2 | 24.476 | 286 | 212 | 4 | 34 | 317 | 44 | 327 | 2.01e-24 | 103 |
| Msa1085510 | AT2G32440.1 | 24.476 | 286 | 212 | 4 | 34 | 317 | 44 | 327 | 2.01e-24 | 103 |
| Msa1085510 | AT1G05160.2 | 23.077 | 286 | 212 | 5 | 34 | 315 | 45 | 326 | 4.34e-24 | 102 |
| Msa1085510 | AT1G05160.1 | 23.077 | 286 | 212 | 5 | 34 | 315 | 45 | 326 | 4.34e-24 | 102 |
| Msa1085510 | AT5G05690.2 | 26.882 | 279 | 194 | 6 | 32 | 309 | 29 | 298 | 5.34e-24 | 101 |
| Msa1085510 | AT5G05690.1 | 26.882 | 279 | 194 | 6 | 32 | 309 | 29 | 298 | 1.08e-23 | 101 |
| Msa1085510 | AT5G14400.4 | 26.644 | 289 | 188 | 7 | 39 | 317 | 1 | 275 | 1.03e-22 | 96.7 |
| Msa1085510 | AT5G14400.3 | 26.644 | 289 | 188 | 7 | 39 | 317 | 1 | 275 | 1.86e-22 | 97.1 |
| Msa1085510 | AT5G14400.2 | 26.644 | 289 | 188 | 7 | 39 | 317 | 1 | 275 | 2.30e-22 | 97.1 |
| Msa1085510 | AT1G55940.2 | 26.596 | 282 | 200 | 6 | 34 | 311 | 45 | 323 | 4.30e-22 | 96.7 |
| Msa1085510 | AT1G55940.1 | 26.596 | 282 | 200 | 6 | 34 | 311 | 45 | 323 | 4.63e-22 | 96.7 |
| Msa1085510 | AT2G29090.3 | 28.108 | 185 | 126 | 3 | 132 | 315 | 47 | 225 | 5.10e-15 | 75.5 |
| Msa1085510 | AT5G38970.2 | 23.041 | 217 | 161 | 2 | 93 | 309 | 6 | 216 | 4.25e-13 | 69.7 |
| Msa1085510 | AT5G38970.4 | 23.041 | 217 | 161 | 2 | 93 | 309 | 6 | 216 | 4.25e-13 | 69.7 |
| Msa1085510 | AT5G14400.1 | 25.322 | 233 | 151 | 6 | 95 | 317 | 2 | 221 | 3.87e-12 | 66.6 |
| Msa1085510 | AT4G15300.3 | 21.452 | 303 | 222 | 8 | 14 | 311 | 2 | 293 | 1.40e-11 | 65.5 |
Find 71 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGGCTTTCACCTATTAT+TGG | 0.180925 | 7_2:+86291621 | None:intergenic |
| AAATTTGCCACCAGGTAAAA+TGG | 0.191783 | 7_2:-86291649 | Msa1085510:CDS |
| TTACCTGGTGGCAAATTTAA+TGG | 0.222647 | 7_2:+86291654 | None:intergenic |
| AATATTGCCGATAAGATTCT+TGG | 0.275763 | 7_2:-86290366 | Msa1085510:CDS |
| CAAGGCTTTCACCTATTATT+GGG | 0.313035 | 7_2:+86291622 | None:intergenic |
| TGATTCCGGCCGCAATTAAC+TGG | 0.321708 | 7_2:+86290586 | None:intergenic |
| ACCATTCAACAAAGCTATAA+AGG | 0.339307 | 7_2:-86290535 | Msa1085510:CDS |
| AAAGACACTTTGTTTCTCAT+TGG | 0.353365 | 7_2:-86291275 | Msa1085510:CDS |
| AAAATGGGTTACCCAATAAT+AGG | 0.354591 | 7_2:-86291633 | Msa1085510:CDS |
| AGCCTTGAGTTCTTATCAAC+TGG | 0.364680 | 7_2:-86291606 | Msa1085510:CDS |
| AACATAACGTTGTAGAGCTT+CGG | 0.370461 | 7_2:+86291320 | None:intergenic |
| CTCCTTTCTTATGAAGTTTG+AGG | 0.378046 | 7_2:+86290512 | None:intergenic |
| ACATAACGTTGTAGAGCTTC+GGG | 0.384089 | 7_2:+86291321 | None:intergenic |
| AAAACAAAGGAGGATAGATT+TGG | 0.387939 | 7_2:-86290475 | Msa1085510:CDS |
| AAGACACTTTGTTTCTCATT+GGG | 0.393050 | 7_2:-86291274 | Msa1085510:CDS |
| TTCTCTTGACTCTAGCTTGA+AGG | 0.396372 | 7_2:-86291388 | Msa1085510:CDS |
| CAAACGACAAGCTAACAAAA+AGG | 0.399058 | 7_2:+86290659 | None:intergenic |
| TGTCATGTCCTCCGATCAAT+AGG | 0.407724 | 7_2:+86290343 | None:intergenic |
| GCTTTGTTGAATGGTGTTCC+TGG | 0.417829 | 7_2:+86290543 | None:intergenic |
| CTAGAGTCAAGAGAAGTAGT+AGG | 0.430083 | 7_2:+86291396 | None:intergenic |
| CAATAGGCCAAGAATCTTAT+CGG | 0.437280 | 7_2:+86290359 | None:intergenic |
| GCCTTTATAGCTTTGTTGAA+TGG | 0.447922 | 7_2:+86290534 | None:intergenic |
| TTGTTGACAAGTGATGAAAA+TGG | 0.459177 | 7_2:-86290408 | Msa1085510:CDS |
| AATTTGCCACCAGGTAAAAT+GGG | 0.460791 | 7_2:-86291648 | Msa1085510:CDS |
| CAAAGAGAAGGAGAAGGGAG+AGG | 0.469658 | 7_2:+86291727 | None:intergenic |
| GGTGTTCCTGGCAAATCAAT+TGG | 0.472360 | 7_2:+86290555 | None:intergenic |
| GGCCTCAAACTTCATAAGAA+AGG | 0.478981 | 7_2:-86290514 | Msa1085510:CDS |
| TCCCTACCAATTGATTTGCC+AGG | 0.489128 | 7_2:-86290561 | Msa1085510:CDS |
| AGAGACAAAGAGAAGGAGAA+GGG | 0.490883 | 7_2:+86291722 | None:intergenic |
| AATTGGTAGGGATATGATTC+CGG | 0.502310 | 7_2:+86290572 | None:intergenic |
| GCTTCGGGTTTAAAGAATTG+AGG | 0.506044 | 7_2:+86291336 | None:intergenic |
| CCATTCCAGTTAATTGCGGC+CGG | 0.508422 | 7_2:-86290591 | Msa1085510:CDS |
| GAATCTACGGTGGTTTGTTG+TGG | 0.515913 | 7_2:-86291501 | Msa1085510:CDS |
| AAGAGACAAAGAGAAGGAGA+AGG | 0.518046 | 7_2:+86291721 | None:intergenic |
| TTCTTATCAACTGGATGGAA+AGG | 0.523515 | 7_2:-86291597 | Msa1085510:CDS |
| AAGATTCTTGGCCTATTGAT+CGG | 0.524538 | 7_2:-86290354 | Msa1085510:CDS |
| AAATGAAAGAGACAAAGAGA+AGG | 0.531102 | 7_2:+86291715 | None:intergenic |
| ACTTTCCTTGTCAAATATCT+CGG | 0.534365 | 7_2:-86290303 | Msa1085510:CDS |
| ATCAATCGTAGGAGAATCTA+CGG | 0.534642 | 7_2:-86291514 | Msa1085510:CDS |
| CGGAGGAATATTTACGCATA+CGG | 0.539451 | 7_2:+86291550 | None:intergenic |
| TTGAGTTCTTATCAACTGGA+TGG | 0.540450 | 7_2:-86291602 | Msa1085510:CDS |
| CCGGCCGCAATTAACTGGAA+TGG | 0.545424 | 7_2:+86290591 | None:intergenic |
| TAGAGTCAAGAGAAGTAGTA+GGG | 0.548147 | 7_2:+86291397 | None:intergenic |
| ATTTATGATAAAGTCTATCA+AGG | 0.553959 | 7_2:-86290267 | None:intergenic |
| AAATTCTCTTTAGCTTACAA+TGG | 0.560199 | 7_2:+86291813 | None:intergenic |
| AGAAATTGACCTCTTGGCCA+AGG | 0.560240 | 7_2:+86291224 | None:intergenic |
| CCTCTTGGCCAAGGGGTAGA+CGG | 0.569551 | 7_2:+86291233 | None:intergenic |
| TGAAATCACCGTCTACCCCT+TGG | 0.570162 | 7_2:-86291241 | Msa1085510:CDS |
| TTCCTGGCAAATCAATTGGT+AGG | 0.574625 | 7_2:+86290559 | None:intergenic |
| GAAATTGACCTCTTGGCCAA+GGG | 0.585160 | 7_2:+86291225 | None:intergenic |
| ATCCAGTTGATAAGAACTCA+AGG | 0.588872 | 7_2:+86291604 | None:intergenic |
| TCTCCATTAAATTTGCCACC+AGG | 0.598181 | 7_2:-86291657 | Msa1085510:CDS |
| ACAACGTTATGTTGGTGTCA+TGG | 0.601070 | 7_2:-86291310 | Msa1085510:CDS |
| TTTAGCTTACAATGGTGCAA+TGG | 0.603712 | 7_2:+86291821 | None:intergenic |
| CCGTCTACCCCTTGGCCAAG+AGG | 0.605112 | 7_2:-86291233 | Msa1085510:intron |
| TCCTGGCAAATCAATTGGTA+GGG | 0.605773 | 7_2:+86290560 | None:intergenic |
| AGGAGGATAGATTTGGCACA+AGG | 0.612239 | 7_2:-86290468 | Msa1085510:CDS |
| TGATCCATTCCAGTTAATTG+CGG | 0.625334 | 7_2:-86290595 | Msa1085510:CDS |
| TGAGACAATATATCTTGTGT+TGG | 0.627813 | 7_2:+86290435 | None:intergenic |
| AGAATAAACTTGTGACTGCA+TGG | 0.635724 | 7_2:-86291446 | Msa1085510:CDS |
| GAAGCTCTACAACGTTATGT+TGG | 0.639205 | 7_2:-86291318 | Msa1085510:CDS |
| CTCTTTAAAACATCAATCGT+AGG | 0.639207 | 7_2:-86291525 | Msa1085510:CDS |
| GGAGGATAGATTTGGCACAA+GGG | 0.655790 | 7_2:-86290467 | Msa1085510:CDS |
| AAATTGACCTCTTGGCCAAG+GGG | 0.660874 | 7_2:+86291226 | None:intergenic |
| TTAAGATCATAAAACAAAGG+AGG | 0.661964 | 7_2:-86290485 | Msa1085510:CDS |
| ATTCTTGGCCTATTGATCGG+AGG | 0.663627 | 7_2:-86290351 | Msa1085510:CDS |
| TAGACTTTATCATAAATGTG+AGG | 0.670421 | 7_2:+86290273 | None:intergenic |
| TGATTAAGATCATAAAACAA+AGG | 0.674941 | 7_2:-86290488 | Msa1085510:CDS |
| GCTCGCCGAGATATTTGACA+AGG | 0.691089 | 7_2:+86290298 | None:intergenic |
| AATCGTAGGAGAATCTACGG+TGG | 0.773902 | 7_2:-86291511 | Msa1085510:CDS |
| ATAAACTTGTGACTGCATGG+TGG | 0.795388 | 7_2:-86291443 | Msa1085510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAGTAAATATATAGTAT+TGG | - | chr7_2:86290989-86291008 | Msa1085510:intron | 10.0% |
| !! | AAATAAATATTATAATCATG+AGG | + | chr7_2:86291203-86291222 | None:intergenic | 10.0% |
| !!! | CATGATTATAATATTTATTT+TGG | - | chr7_2:86291203-86291222 | Msa1085510:intron | 10.0% |
| !! | ATTAAGTAAATATATAGTAT+TGG | - | chr7_2:86290989-86291008 | Msa1085510:intron | 10.0% |
| !! | AAATAAATATTATAATCATG+AGG | + | chr7_2:86291203-86291222 | None:intergenic | 10.0% |
| !!! | CATGATTATAATATTTATTT+TGG | - | chr7_2:86291203-86291222 | Msa1085510:intron | 10.0% |
| !!! | CATATCTGAAATATTATATT+TGG | - | chr7_2:86291030-86291049 | Msa1085510:intron | 15.0% |
| !!! | CATATCTGAAATATTATATT+TGG | - | chr7_2:86291030-86291049 | Msa1085510:intron | 15.0% |
| !! | AATTAATTGAAGAGAATGAA+TGG | + | chr7_2:86290913-86290932 | None:intergenic | 20.0% |
| !! | TCAGATATGAATTTAATCTT+AGG | + | chr7_2:86291019-86291038 | None:intergenic | 20.0% |
| !! | AAAAAATCTTCACAATTGAA+TGG | + | chr7_2:86291312-86291331 | None:intergenic | 20.0% |
| !! | TGATTAAGATCATAAAACAA+AGG | - | chr7_2:86291603-86291622 | Msa1085510:CDS | 20.0% |
| !! | AATTAATTGAAGAGAATGAA+TGG | + | chr7_2:86290913-86290932 | None:intergenic | 20.0% |
| !! | TCAGATATGAATTTAATCTT+AGG | + | chr7_2:86291019-86291038 | None:intergenic | 20.0% |
| !! | AAAAAATCTTCACAATTGAA+TGG | + | chr7_2:86291312-86291331 | None:intergenic | 20.0% |
| !! | TGATTAAGATCATAAAACAA+AGG | - | chr7_2:86291603-86291622 | Msa1085510:CDS | 20.0% |
| !! | AAATTCTCTTTAGCTTACAA+TGG | + | chr7_2:86290281-86290300 | None:intergenic | 25.0% |
| ! | TTTAAGTCACAAAAAAAGCA+TGG | - | chr7_2:86290328-86290347 | Msa1085510:CDS | 25.0% |
| !!! | GATTGATGTTTTAAAGAGTT+CGG | + | chr7_2:86290564-86290583 | None:intergenic | 25.0% |
| !!! | AAGATTTTGTTTACACTATC+TGG | + | chr7_2:86290674-86290693 | None:intergenic | 25.0% |
| ! | TTAATTTATTGCTTTGCTTG+TGG | - | chr7_2:86290944-86290963 | Msa1085510:intron | 25.0% |
| ! | AAATATTATATTTGGTCTCG+TGG | - | chr7_2:86291038-86291057 | Msa1085510:intron | 25.0% |
| ! | TTAAGATCATAAAACAAAGG+AGG | - | chr7_2:86291606-86291625 | Msa1085510:CDS | 25.0% |
| ! | TAGACTTTATCATAAATGTG+AGG | + | chr7_2:86291821-86291840 | None:intergenic | 25.0% |
| !! | AAATTCTCTTTAGCTTACAA+TGG | + | chr7_2:86290281-86290300 | None:intergenic | 25.0% |
| ! | TTTAAGTCACAAAAAAAGCA+TGG | - | chr7_2:86290328-86290347 | Msa1085510:CDS | 25.0% |
| !!! | GATTGATGTTTTAAAGAGTT+CGG | + | chr7_2:86290564-86290583 | None:intergenic | 25.0% |
| !!! | AAGATTTTGTTTACACTATC+TGG | + | chr7_2:86290674-86290693 | None:intergenic | 25.0% |
| ! | TTAATTTATTGCTTTGCTTG+TGG | - | chr7_2:86290944-86290963 | Msa1085510:intron | 25.0% |
| ! | AAATATTATATTTGGTCTCG+TGG | - | chr7_2:86291038-86291057 | Msa1085510:intron | 25.0% |
| ! | TTAAGATCATAAAACAAAGG+AGG | - | chr7_2:86291606-86291625 | Msa1085510:CDS | 25.0% |
| ! | TAGACTTTATCATAAATGTG+AGG | + | chr7_2:86291821-86291840 | None:intergenic | 25.0% |
| AAATGAAAGAGACAAAGAGA+AGG | + | chr7_2:86290379-86290398 | None:intergenic | 30.0% | |
| !! | AAAATGGGTTACCCAATAAT+AGG | - | chr7_2:86290458-86290477 | Msa1085510:CDS | 30.0% |
| !! | CTCTTTAAAACATCAATCGT+AGG | - | chr7_2:86290566-86290585 | Msa1085510:CDS | 30.0% |
| ! | AAAGACACTTTGTTTCTCAT+TGG | - | chr7_2:86290816-86290835 | Msa1085510:intron | 30.0% |
| ! | AAGACACTTTGTTTCTCATT+GGG | - | chr7_2:86290817-86290836 | Msa1085510:intron | 30.0% |
| ATATGAAGAAATTGACCTCT+TGG | + | chr7_2:86290876-86290895 | None:intergenic | 30.0% | |
| ACCATTCAACAAAGCTATAA+AGG | - | chr7_2:86291556-86291575 | Msa1085510:CDS | 30.0% | |
| AAAACAAAGGAGGATAGATT+TGG | - | chr7_2:86291616-86291635 | Msa1085510:CDS | 30.0% | |
| TGAGACAATATATCTTGTGT+TGG | + | chr7_2:86291659-86291678 | None:intergenic | 30.0% | |
| TTGTTGACAAGTGATGAAAA+TGG | - | chr7_2:86291683-86291702 | Msa1085510:CDS | 30.0% | |
| AATATTGCCGATAAGATTCT+TGG | - | chr7_2:86291725-86291744 | Msa1085510:CDS | 30.0% | |
| ACTTTCCTTGTCAAATATCT+CGG | - | chr7_2:86291788-86291807 | Msa1085510:five_prime_UTR | 30.0% | |
| AAATGAAAGAGACAAAGAGA+AGG | + | chr7_2:86290379-86290398 | None:intergenic | 30.0% | |
| !! | AAAATGGGTTACCCAATAAT+AGG | - | chr7_2:86290458-86290477 | Msa1085510:CDS | 30.0% |
| !! | CTCTTTAAAACATCAATCGT+AGG | - | chr7_2:86290566-86290585 | Msa1085510:CDS | 30.0% |
| ! | AAAGACACTTTGTTTCTCAT+TGG | - | chr7_2:86290816-86290835 | Msa1085510:intron | 30.0% |
| ! | AAGACACTTTGTTTCTCATT+GGG | - | chr7_2:86290817-86290836 | Msa1085510:intron | 30.0% |
| ATATGAAGAAATTGACCTCT+TGG | + | chr7_2:86290876-86290895 | None:intergenic | 30.0% | |
| ACCATTCAACAAAGCTATAA+AGG | - | chr7_2:86291556-86291575 | Msa1085510:CDS | 30.0% | |
| AAAACAAAGGAGGATAGATT+TGG | - | chr7_2:86291616-86291635 | Msa1085510:CDS | 30.0% | |
| TGAGACAATATATCTTGTGT+TGG | + | chr7_2:86291659-86291678 | None:intergenic | 30.0% | |
| TTGTTGACAAGTGATGAAAA+TGG | - | chr7_2:86291683-86291702 | Msa1085510:CDS | 30.0% | |
| AATATTGCCGATAAGATTCT+TGG | - | chr7_2:86291725-86291744 | Msa1085510:CDS | 30.0% | |
| ACTTTCCTTGTCAAATATCT+CGG | - | chr7_2:86291788-86291807 | Msa1085510:five_prime_UTR | 30.0% | |
| ! | TTTAGCTTACAATGGTGCAA+TGG | + | chr7_2:86290273-86290292 | None:intergenic | 35.0% |
| TTACCTGGTGGCAAATTTAA+TGG | + | chr7_2:86290440-86290459 | None:intergenic | 35.0% | |
| AAATTTGCCACCAGGTAAAA+TGG | - | chr7_2:86290442-86290461 | Msa1085510:CDS | 35.0% | |
| AATTTGCCACCAGGTAAAAT+GGG | - | chr7_2:86290443-86290462 | Msa1085510:CDS | 35.0% | |
| CAAGGCTTTCACCTATTATT+GGG | + | chr7_2:86290472-86290491 | None:intergenic | 35.0% | |
| TCAAGGCTTTCACCTATTAT+TGG | + | chr7_2:86290473-86290492 | None:intergenic | 35.0% | |
| !! | ATCCAGTTGATAAGAACTCA+AGG | + | chr7_2:86290490-86290509 | None:intergenic | 35.0% |
| TTGAGTTCTTATCAACTGGA+TGG | - | chr7_2:86290489-86290508 | Msa1085510:CDS | 35.0% | |
| TTCTTATCAACTGGATGGAA+AGG | - | chr7_2:86290494-86290513 | Msa1085510:CDS | 35.0% | |
| ! | CGGTCGAAAATGAATTTTTC+AGG | + | chr7_2:86290524-86290543 | None:intergenic | 35.0% |
| !!! | TGATGTTTTAAAGAGTTCGG+AGG | + | chr7_2:86290561-86290580 | None:intergenic | 35.0% |
| ATCAATCGTAGGAGAATCTA+CGG | - | chr7_2:86290577-86290596 | Msa1085510:CDS | 35.0% | |
| AGAATAAACTTGTGACTGCA+TGG | - | chr7_2:86290645-86290664 | Msa1085510:CDS | 35.0% | |
| TAGAGTCAAGAGAAGTAGTA+GGG | + | chr7_2:86290697-86290716 | None:intergenic | 35.0% | |
| AACATAACGTTGTAGAGCTT+CGG | + | chr7_2:86290774-86290793 | None:intergenic | 35.0% | |
| GAAGTATGAGTCATGAACAA+TGG | + | chr7_2:86291234-86291253 | None:intergenic | 35.0% | |
| TGTCGATAATAACACTTGAC+AGG | - | chr7_2:86291405-86291424 | Msa1085510:CDS | 35.0% | |
| CAAACGACAAGCTAACAAAA+AGG | + | chr7_2:86291435-86291454 | None:intergenic | 35.0% | |
| TGATCCATTCCAGTTAATTG+CGG | - | chr7_2:86291496-86291515 | Msa1085510:CDS | 35.0% | |
| AATTGGTAGGGATATGATTC+CGG | + | chr7_2:86291522-86291541 | None:intergenic | 35.0% | |
| !! | GCCTTTATAGCTTTGTTGAA+TGG | + | chr7_2:86291560-86291579 | None:intergenic | 35.0% |
| CTCCTTTCTTATGAAGTTTG+AGG | + | chr7_2:86291582-86291601 | None:intergenic | 35.0% | |
| CAATAGGCCAAGAATCTTAT+CGG | + | chr7_2:86291735-86291754 | None:intergenic | 35.0% | |
| AAGATTCTTGGCCTATTGAT+CGG | - | chr7_2:86291737-86291756 | Msa1085510:CDS | 35.0% | |
| ! | TTTAGCTTACAATGGTGCAA+TGG | + | chr7_2:86290273-86290292 | None:intergenic | 35.0% |
| TTACCTGGTGGCAAATTTAA+TGG | + | chr7_2:86290440-86290459 | None:intergenic | 35.0% | |
| AAATTTGCCACCAGGTAAAA+TGG | - | chr7_2:86290442-86290461 | Msa1085510:CDS | 35.0% | |
| AATTTGCCACCAGGTAAAAT+GGG | - | chr7_2:86290443-86290462 | Msa1085510:CDS | 35.0% | |
| CAAGGCTTTCACCTATTATT+GGG | + | chr7_2:86290472-86290491 | None:intergenic | 35.0% | |
| TCAAGGCTTTCACCTATTAT+TGG | + | chr7_2:86290473-86290492 | None:intergenic | 35.0% | |
| !! | ATCCAGTTGATAAGAACTCA+AGG | + | chr7_2:86290490-86290509 | None:intergenic | 35.0% |
| TTGAGTTCTTATCAACTGGA+TGG | - | chr7_2:86290489-86290508 | Msa1085510:CDS | 35.0% | |
| TTCTTATCAACTGGATGGAA+AGG | - | chr7_2:86290494-86290513 | Msa1085510:CDS | 35.0% | |
| ! | CGGTCGAAAATGAATTTTTC+AGG | + | chr7_2:86290524-86290543 | None:intergenic | 35.0% |
| !!! | TGATGTTTTAAAGAGTTCGG+AGG | + | chr7_2:86290561-86290580 | None:intergenic | 35.0% |
| ATCAATCGTAGGAGAATCTA+CGG | - | chr7_2:86290577-86290596 | Msa1085510:CDS | 35.0% | |
| AGAATAAACTTGTGACTGCA+TGG | - | chr7_2:86290645-86290664 | Msa1085510:CDS | 35.0% | |
| TAGAGTCAAGAGAAGTAGTA+GGG | + | chr7_2:86290697-86290716 | None:intergenic | 35.0% | |
| AACATAACGTTGTAGAGCTT+CGG | + | chr7_2:86290774-86290793 | None:intergenic | 35.0% | |
| GAAGTATGAGTCATGAACAA+TGG | + | chr7_2:86291234-86291253 | None:intergenic | 35.0% | |
| TGTCGATAATAACACTTGAC+AGG | - | chr7_2:86291405-86291424 | Msa1085510:CDS | 35.0% | |
| CAAACGACAAGCTAACAAAA+AGG | + | chr7_2:86291435-86291454 | None:intergenic | 35.0% | |
| TGATCCATTCCAGTTAATTG+CGG | - | chr7_2:86291496-86291515 | Msa1085510:CDS | 35.0% | |
| AATTGGTAGGGATATGATTC+CGG | + | chr7_2:86291522-86291541 | None:intergenic | 35.0% | |
| !! | GCCTTTATAGCTTTGTTGAA+TGG | + | chr7_2:86291560-86291579 | None:intergenic | 35.0% |
| CTCCTTTCTTATGAAGTTTG+AGG | + | chr7_2:86291582-86291601 | None:intergenic | 35.0% | |
| CAATAGGCCAAGAATCTTAT+CGG | + | chr7_2:86291735-86291754 | None:intergenic | 35.0% | |
| AAGATTCTTGGCCTATTGAT+CGG | - | chr7_2:86291737-86291756 | Msa1085510:CDS | 35.0% | |
| AGAGACAAAGAGAAGGAGAA+GGG | + | chr7_2:86290372-86290391 | None:intergenic | 40.0% | |
| AAGAGACAAAGAGAAGGAGA+AGG | + | chr7_2:86290373-86290392 | None:intergenic | 40.0% | |
| TCTCCATTAAATTTGCCACC+AGG | - | chr7_2:86290434-86290453 | Msa1085510:CDS | 40.0% | |
| ! | ATTGGGTAACCCATTTTACC+TGG | + | chr7_2:86290455-86290474 | None:intergenic | 40.0% |
| AGCCTTGAGTTCTTATCAAC+TGG | - | chr7_2:86290485-86290504 | Msa1085510:CDS | 40.0% | |
| CGGAGGAATATTTACGCATA+CGG | + | chr7_2:86290544-86290563 | None:intergenic | 40.0% | |
| ATAAACTTGTGACTGCATGG+TGG | - | chr7_2:86290648-86290667 | Msa1085510:CDS | 40.0% | |
| CTAGAGTCAAGAGAAGTAGT+AGG | + | chr7_2:86290698-86290717 | None:intergenic | 40.0% | |
| ! | TTCTCTTGACTCTAGCTTGA+AGG | - | chr7_2:86290703-86290722 | Msa1085510:intron | 40.0% |
| ! | GCTTCGGGTTTAAAGAATTG+AGG | + | chr7_2:86290758-86290777 | None:intergenic | 40.0% |
| ACATAACGTTGTAGAGCTTC+GGG | + | chr7_2:86290773-86290792 | None:intergenic | 40.0% | |
| GAAGCTCTACAACGTTATGT+TGG | - | chr7_2:86290773-86290792 | Msa1085510:intron | 40.0% | |
| !! | ACAACGTTATGTTGGTGTCA+TGG | - | chr7_2:86290781-86290800 | Msa1085510:intron | 40.0% |
| GGATGTAAATTCGTGCAATG+AGG | + | chr7_2:86291361-86291380 | None:intergenic | 40.0% | |
| TCCTGGCAAATCAATTGGTA+GGG | + | chr7_2:86291534-86291553 | None:intergenic | 40.0% | |
| TTCCTGGCAAATCAATTGGT+AGG | + | chr7_2:86291535-86291554 | None:intergenic | 40.0% | |
| GGCCTCAAACTTCATAAGAA+AGG | - | chr7_2:86291577-86291596 | Msa1085510:CDS | 40.0% | |
| AGAGACAAAGAGAAGGAGAA+GGG | + | chr7_2:86290372-86290391 | None:intergenic | 40.0% | |
| AAGAGACAAAGAGAAGGAGA+AGG | + | chr7_2:86290373-86290392 | None:intergenic | 40.0% | |
| TCTCCATTAAATTTGCCACC+AGG | - | chr7_2:86290434-86290453 | Msa1085510:CDS | 40.0% | |
| ! | ATTGGGTAACCCATTTTACC+TGG | + | chr7_2:86290455-86290474 | None:intergenic | 40.0% |
| AGCCTTGAGTTCTTATCAAC+TGG | - | chr7_2:86290485-86290504 | Msa1085510:CDS | 40.0% | |
| CGGAGGAATATTTACGCATA+CGG | + | chr7_2:86290544-86290563 | None:intergenic | 40.0% | |
| ATAAACTTGTGACTGCATGG+TGG | - | chr7_2:86290648-86290667 | Msa1085510:CDS | 40.0% | |
| CTAGAGTCAAGAGAAGTAGT+AGG | + | chr7_2:86290698-86290717 | None:intergenic | 40.0% | |
| ! | TTCTCTTGACTCTAGCTTGA+AGG | - | chr7_2:86290703-86290722 | Msa1085510:intron | 40.0% |
| ! | GCTTCGGGTTTAAAGAATTG+AGG | + | chr7_2:86290758-86290777 | None:intergenic | 40.0% |
| ACATAACGTTGTAGAGCTTC+GGG | + | chr7_2:86290773-86290792 | None:intergenic | 40.0% | |
| GAAGCTCTACAACGTTATGT+TGG | - | chr7_2:86290773-86290792 | Msa1085510:intron | 40.0% | |
| !! | ACAACGTTATGTTGGTGTCA+TGG | - | chr7_2:86290781-86290800 | Msa1085510:intron | 40.0% |
| GGATGTAAATTCGTGCAATG+AGG | + | chr7_2:86291361-86291380 | None:intergenic | 40.0% | |
| TCCTGGCAAATCAATTGGTA+GGG | + | chr7_2:86291534-86291553 | None:intergenic | 40.0% | |
| TTCCTGGCAAATCAATTGGT+AGG | + | chr7_2:86291535-86291554 | None:intergenic | 40.0% | |
| GGCCTCAAACTTCATAAGAA+AGG | - | chr7_2:86291577-86291596 | Msa1085510:CDS | 40.0% | |
| AATCGTAGGAGAATCTACGG+TGG | - | chr7_2:86290580-86290599 | Msa1085510:CDS | 45.0% | |
| !! | GAATCTACGGTGGTTTGTTG+TGG | - | chr7_2:86290590-86290609 | Msa1085510:CDS | 45.0% |
| AAATTGACCTCTTGGCCAAG+GGG | + | chr7_2:86290868-86290887 | None:intergenic | 45.0% | |
| GAAATTGACCTCTTGGCCAA+GGG | + | chr7_2:86290869-86290888 | None:intergenic | 45.0% | |
| AGAAATTGACCTCTTGGCCA+AGG | + | chr7_2:86290870-86290889 | None:intergenic | 45.0% | |
| TTGCTTGTGGCATACATACG+AGG | - | chr7_2:86290957-86290976 | Msa1085510:intron | 45.0% | |
| !! | TCCCTACCAATTGATTTGCC+AGG | - | chr7_2:86291530-86291549 | Msa1085510:CDS | 45.0% |
| GGTGTTCCTGGCAAATCAAT+TGG | + | chr7_2:86291539-86291558 | None:intergenic | 45.0% | |
| ! | GCTTTGTTGAATGGTGTTCC+TGG | + | chr7_2:86291551-86291570 | None:intergenic | 45.0% |
| AGGAGGATAGATTTGGCACA+AGG | - | chr7_2:86291623-86291642 | Msa1085510:CDS | 45.0% | |
| GGAGGATAGATTTGGCACAA+GGG | - | chr7_2:86291624-86291643 | Msa1085510:CDS | 45.0% | |
| ATTCTTGGCCTATTGATCGG+AGG | - | chr7_2:86291740-86291759 | Msa1085510:CDS | 45.0% | |
| TGTCATGTCCTCCGATCAAT+AGG | + | chr7_2:86291751-86291770 | None:intergenic | 45.0% | |
| AATCGTAGGAGAATCTACGG+TGG | - | chr7_2:86290580-86290599 | Msa1085510:CDS | 45.0% | |
| !! | GAATCTACGGTGGTTTGTTG+TGG | - | chr7_2:86290590-86290609 | Msa1085510:CDS | 45.0% |
| AAATTGACCTCTTGGCCAAG+GGG | + | chr7_2:86290868-86290887 | None:intergenic | 45.0% | |
| GAAATTGACCTCTTGGCCAA+GGG | + | chr7_2:86290869-86290888 | None:intergenic | 45.0% | |
| AGAAATTGACCTCTTGGCCA+AGG | + | chr7_2:86290870-86290889 | None:intergenic | 45.0% | |
| TTGCTTGTGGCATACATACG+AGG | - | chr7_2:86290957-86290976 | Msa1085510:intron | 45.0% | |
| !! | TCCCTACCAATTGATTTGCC+AGG | - | chr7_2:86291530-86291549 | Msa1085510:CDS | 45.0% |
| GGTGTTCCTGGCAAATCAAT+TGG | + | chr7_2:86291539-86291558 | None:intergenic | 45.0% | |
| ! | GCTTTGTTGAATGGTGTTCC+TGG | + | chr7_2:86291551-86291570 | None:intergenic | 45.0% |
| AGGAGGATAGATTTGGCACA+AGG | - | chr7_2:86291623-86291642 | Msa1085510:CDS | 45.0% | |
| GGAGGATAGATTTGGCACAA+GGG | - | chr7_2:86291624-86291643 | Msa1085510:CDS | 45.0% | |
| ATTCTTGGCCTATTGATCGG+AGG | - | chr7_2:86291740-86291759 | Msa1085510:CDS | 45.0% | |
| TGTCATGTCCTCCGATCAAT+AGG | + | chr7_2:86291751-86291770 | None:intergenic | 45.0% | |
| !! | CAATTAAATTTATAAATTTA+AGG | + | chr7_2:86291382-86291401 | None:intergenic | 5.0% |
| !! | CAATTAAATTTATAAATTTA+AGG | + | chr7_2:86291382-86291401 | None:intergenic | 5.0% |
| CAAAGAGAAGGAGAAGGGAG+AGG | + | chr7_2:86290367-86290386 | None:intergenic | 50.0% | |
| ! | GGGTAACCCATTTTACCTGG+TGG | + | chr7_2:86290452-86290471 | None:intergenic | 50.0% |
| TGAAATCACCGTCTACCCCT+TGG | - | chr7_2:86290850-86290869 | Msa1085510:intron | 50.0% | |
| CCATTCCAGTTAATTGCGGC+CGG | - | chr7_2:86291500-86291519 | Msa1085510:CDS | 50.0% | |
| TGATTCCGGCCGCAATTAAC+TGG | + | chr7_2:86291508-86291527 | None:intergenic | 50.0% | |
| GCTCGCCGAGATATTTGACA+AGG | + | chr7_2:86291796-86291815 | None:intergenic | 50.0% | |
| CAAAGAGAAGGAGAAGGGAG+AGG | + | chr7_2:86290367-86290386 | None:intergenic | 50.0% | |
| ! | GGGTAACCCATTTTACCTGG+TGG | + | chr7_2:86290452-86290471 | None:intergenic | 50.0% |
| TGAAATCACCGTCTACCCCT+TGG | - | chr7_2:86290850-86290869 | Msa1085510:intron | 50.0% | |
| CCATTCCAGTTAATTGCGGC+CGG | - | chr7_2:86291500-86291519 | Msa1085510:CDS | 50.0% | |
| TGATTCCGGCCGCAATTAAC+TGG | + | chr7_2:86291508-86291527 | None:intergenic | 50.0% | |
| GCTCGCCGAGATATTTGACA+AGG | + | chr7_2:86291796-86291815 | None:intergenic | 50.0% | |
| CCGGCCGCAATTAACTGGAA+TGG | + | chr7_2:86291503-86291522 | None:intergenic | 55.0% | |
| CCGGCCGCAATTAACTGGAA+TGG | + | chr7_2:86291503-86291522 | None:intergenic | 55.0% | |
| CCTCTTGGCCAAGGGGTAGA+CGG | + | chr7_2:86290861-86290880 | None:intergenic | 60.0% | |
| CCTCTTGGCCAAGGGGTAGA+CGG | + | chr7_2:86290861-86290880 | None:intergenic | 60.0% | |
| CCGTCTACCCCTTGGCCAAG+AGG | - | chr7_2:86290858-86290877 | Msa1085510:intron | 65.0% | |
| CCGTCTACCCCTTGGCCAAG+AGG | - | chr7_2:86290858-86290877 | Msa1085510:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 86290269 | 86291844 | 86290269 | ID=Msa1085510;Name=Msa1085510 |
| chr7_2 | mRNA | 86290269 | 86291844 | 86290269 | ID=Msa1085510-mRNA-1;Parent=Msa1085510;Name=Msa1085510-mRNA-1;_AED=0.00;_eAED=0.00;_QI=78|1|0.5|1|1|0.5|2|0|317 |
| chr7_2 | exon | 86290269 | 86290686 | 86290269 | ID=Msa1085510-mRNA-1:exon:23370;Parent=Msa1085510-mRNA-1 |
| chr7_2 | exon | 86291234 | 86291844 | 86291234 | ID=Msa1085510-mRNA-1:exon:23369;Parent=Msa1085510-mRNA-1 |
| chr7_2 | five_prime_UTR | 86291767 | 86291844 | 86291767 | ID=Msa1085510-mRNA-1:five_prime_utr;Parent=Msa1085510-mRNA-1 |
| chr7_2 | CDS | 86291234 | 86291766 | 86291234 | ID=Msa1085510-mRNA-1:cds;Parent=Msa1085510-mRNA-1 |
| chr7_2 | CDS | 86290269 | 86290686 | 86290269 | ID=Msa1085510-mRNA-1:cds;Parent=Msa1085510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
