Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1088220 | XP_003601640.1 | 97.669 | 429 | 10 | 0 | 1 | 429 | 1 | 429 | 0.0 | 864 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1088220 | sp|Q9NVG8|TBC13_HUMAN | 49.490 | 196 | 97 | 2 | 233 | 428 | 204 | 397 | 5.45e-60 | 203 |
| Msa1088220 | sp|Q9NVG8|TBC13_HUMAN | 36.567 | 134 | 68 | 1 | 93 | 226 | 21 | 137 | 9.19e-21 | 97.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1088220 | G7JA63 | 97.669 | 429 | 10 | 0 | 1 | 429 | 1 | 429 | 0.0 | 864 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0421330 | Msa1088220 | 0.871801 | 5.180349e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1088220 | MtrunA17_Chr3g0121451 | 97.669 | 429 | 10 | 0 | 1 | 429 | 1 | 429 | 0.0 | 864 |
| Msa1088220 | MtrunA17_Chr8g0378291 | 70.917 | 447 | 105 | 4 | 1 | 429 | 1 | 440 | 0.0 | 610 |
| Msa1088220 | MtrunA17_Chr4g0063771 | 61.508 | 252 | 96 | 1 | 177 | 427 | 46 | 297 | 1.12e-109 | 325 |
| Msa1088220 | MtrunA17_Chr4g0033831 | 26.667 | 345 | 184 | 9 | 88 | 419 | 141 | 429 | 2.61e-25 | 107 |
| Msa1088220 | MtrunA17_Chr2g0329691 | 25.600 | 375 | 207 | 10 | 58 | 416 | 101 | 419 | 3.40e-24 | 104 |
| Msa1088220 | MtrunA17_Chr4g0064141 | 26.235 | 324 | 171 | 11 | 91 | 409 | 351 | 611 | 1.22e-21 | 97.8 |
| Msa1088220 | MtrunA17_Chr1g0183581 | 27.076 | 277 | 164 | 9 | 98 | 371 | 68 | 309 | 3.38e-21 | 95.1 |
| Msa1088220 | MtrunA17_Chr4g0041821 | 25.260 | 289 | 183 | 8 | 96 | 371 | 54 | 322 | 1.80e-17 | 84.0 |
| Msa1088220 | MtrunA17_Chr2g0329651 | 27.273 | 165 | 97 | 5 | 209 | 371 | 372 | 515 | 5.85e-13 | 70.9 |
| Msa1088220 | MtrunA17_Chr6g0456341 | 24.803 | 254 | 164 | 9 | 183 | 429 | 98 | 331 | 4.46e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1088220 | AT4G13730.1 | 68.510 | 416 | 109 | 4 | 33 | 429 | 36 | 448 | 0.0 | 592 |
| Msa1088220 | AT1G04830.1 | 62.306 | 451 | 139 | 4 | 1 | 428 | 1 | 443 | 0.0 | 580 |
| Msa1088220 | AT4G13730.3 | 66.587 | 416 | 104 | 5 | 33 | 428 | 36 | 436 | 0.0 | 572 |
| Msa1088220 | AT1G04830.2 | 61.765 | 442 | 138 | 4 | 1 | 419 | 1 | 434 | 0.0 | 564 |
| Msa1088220 | AT4G13730.2 | 65.395 | 367 | 103 | 4 | 33 | 379 | 36 | 398 | 1.31e-177 | 502 |
| Msa1088220 | AT1G04830.3 | 55.211 | 451 | 128 | 5 | 1 | 428 | 1 | 400 | 2.94e-170 | 483 |
| Msa1088220 | AT4G28550.3 | 28.620 | 297 | 182 | 9 | 93 | 386 | 57 | 326 | 1.64e-24 | 103 |
| Msa1088220 | AT2G30710.1 | 24.938 | 401 | 227 | 11 | 35 | 418 | 70 | 413 | 4.39e-24 | 104 |
| Msa1088220 | AT4G28550.2 | 28.470 | 281 | 171 | 9 | 93 | 370 | 57 | 310 | 4.30e-23 | 99.8 |
| Msa1088220 | AT4G28550.1 | 28.975 | 283 | 169 | 10 | 93 | 371 | 57 | 311 | 9.80e-23 | 100 |
| Msa1088220 | AT2G20440.3 | 25.862 | 290 | 173 | 9 | 93 | 373 | 57 | 313 | 1.90e-22 | 98.2 |
| Msa1088220 | AT2G20440.1 | 26.042 | 288 | 171 | 9 | 93 | 371 | 57 | 311 | 2.62e-22 | 99.0 |
| Msa1088220 | AT2G20440.2 | 26.042 | 288 | 171 | 9 | 93 | 371 | 57 | 311 | 2.62e-22 | 99.0 |
| Msa1088220 | AT2G20440.4 | 31.288 | 163 | 94 | 4 | 209 | 371 | 51 | 195 | 4.18e-17 | 82.0 |
| Msa1088220 | AT5G52580.2 | 23.692 | 325 | 178 | 13 | 91 | 409 | 376 | 636 | 6.12e-17 | 83.6 |
| Msa1088220 | AT5G52580.3 | 23.692 | 325 | 178 | 13 | 91 | 409 | 365 | 625 | 6.62e-17 | 83.6 |
| Msa1088220 | AT5G52580.1 | 23.692 | 325 | 178 | 13 | 91 | 409 | 359 | 619 | 7.19e-17 | 83.6 |
| Msa1088220 | AT4G27100.2 | 26.403 | 303 | 170 | 13 | 96 | 376 | 54 | 325 | 9.11e-14 | 73.2 |
| Msa1088220 | AT4G27100.1 | 26.403 | 303 | 170 | 13 | 96 | 376 | 54 | 325 | 9.80e-14 | 73.2 |
| Msa1088220 | AT3G02460.1 | 25.397 | 252 | 165 | 8 | 183 | 429 | 99 | 332 | 1.05e-12 | 69.3 |
| Msa1088220 | AT3G02460.3 | 25.397 | 252 | 165 | 8 | 183 | 429 | 99 | 332 | 2.17e-12 | 68.6 |
| Msa1088220 | AT3G02460.5 | 26.667 | 195 | 125 | 6 | 183 | 374 | 99 | 278 | 8.06e-11 | 63.2 |
Find 137 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACCTAAATGCATAAAAT+TGG | 0.183697 | 7_3:+1265825 | None:intergenic |
| TTGCTGACAGCCTTCGTATT+TGG | 0.221687 | 7_3:-1265772 | Msa1088220:CDS |
| GAGATTCAATTTGTTGAAAA+AGG | 0.255576 | 7_3:+1269225 | None:intergenic |
| CTTAGAATTTGTGTTGGAAT+TGG | 0.281833 | 7_3:-1269413 | Msa1088220:five_prime_UTR |
| AGTAATTTACAAACATAAAA+TGG | 0.287483 | 7_3:+1264031 | None:intergenic |
| ACACGTTTCTTCGCCATTAT+TGG | 0.289125 | 7_3:+1269158 | None:intergenic |
| TGCTGACAGCCTTCGTATTT+GGG | 0.295459 | 7_3:-1265771 | Msa1088220:CDS |
| TTAGCAGCAAAGCAACTTCT+AGG | 0.304211 | 7_3:-1269315 | Msa1088220:five_prime_UTR |
| AAAAGAAATATGGAGAAAAT+AGG | 0.314112 | 7_3:-1269442 | Msa1088220:five_prime_UTR |
| CCACAGAAGAAGTGCATATC+TGG | 0.316824 | 7_3:+1267202 | None:intergenic |
| TTGGAATTCATTCAAGTTAG+AGG | 0.328432 | 7_3:-1269394 | Msa1088220:five_prime_UTR |
| CCACCTAAATGCATAAAATT+GGG | 0.333447 | 7_3:+1265826 | None:intergenic |
| TTATTGGTTTACGATTATCT+AGG | 0.340958 | 7_3:+1269174 | None:intergenic |
| AGATAATCGTAAACCAATAA+TGG | 0.349340 | 7_3:-1269171 | Msa1088220:exon |
| CAACTTGACAATAGTATTGT+TGG | 0.351390 | 7_3:-1266560 | Msa1088220:CDS |
| TCAATTAGCAAAATCTAATC+AGG | 0.352915 | 7_3:-1267173 | Msa1088220:intron |
| CTGGTTTACGTTCTACTATC+TGG | 0.362401 | 7_3:-1268729 | Msa1088220:CDS |
| TTACTAATTGATAGTTATCT+AGG | 0.362499 | 7_3:-1268810 | Msa1088220:intron |
| GTCAATCTGCTCTATGATAT+CGG | 0.394833 | 7_3:+1267246 | None:intergenic |
| AAGGTACCTCAGCTAACAAT+TGG | 0.404490 | 7_3:+1268907 | None:intergenic |
| GAACGTAAACCAGGAGAATC+AGG | 0.410846 | 7_3:+1268739 | None:intergenic |
| CTAACAATTGGGACTGGGAC+TGG | 0.421705 | 7_3:+1268919 | None:intergenic |
| GTTCGTAGGCGCCTCCTGGC+TGG | 0.422077 | 7_3:-1264207 | Msa1088220:CDS |
| GCGGAGGAGGAAGAAGAAGA+GGG | 0.422496 | 7_3:+1268984 | None:intergenic |
| CATAGGACTGTTGAGCCAAT+CGG | 0.442077 | 7_3:+1269133 | None:intergenic |
| TCTCGTTCGTAGGCGCCTCC+TGG | 0.442330 | 7_3:-1264211 | Msa1088220:CDS |
| GTAAATTACTCTGTAAATGT+TGG | 0.443650 | 7_3:-1264018 | Msa1088220:three_prime_UTR |
| CCTTGAACGTATCTAATACC+TGG | 0.446527 | 7_3:+1267017 | None:intergenic |
| TCAAAAGGACAATAGATTGA+TGG | 0.452627 | 7_3:-1263851 | Msa1088220:three_prime_UTR |
| AAATGGAAATGCTACGTTGA+AGG | 0.464886 | 7_3:+1264048 | None:intergenic |
| AAATGACTAATGTTTGTAGA+AGG | 0.466590 | 7_3:+1264147 | None:intergenic |
| AGTAATGGCATTATGATTTG+AGG | 0.467937 | 7_3:+1269016 | None:intergenic |
| ATTTGTACCTGTGGACCATC+GGG | 0.472986 | 7_3:+1265731 | None:intergenic |
| GAATGTGTCGGCTTCAGAAA+AGG | 0.473240 | 7_3:+1266631 | None:intergenic |
| TACGTGTATAGTCAGTCTAA+TGG | 0.476722 | 7_3:-1264104 | Msa1088220:exon |
| TGCTTTGCTGCTAATTGAGT+GGG | 0.479781 | 7_3:+1269324 | None:intergenic |
| GGGGAACATCCTTTGAGTCT+TGG | 0.480329 | 7_3:-1268007 | Msa1088220:CDS |
| GGACTGGGCCAGACCGGAGA+TGG | 0.487797 | 7_3:+1268935 | None:intergenic |
| GGAGGAAGTAGAAGCGGAGG+AGG | 0.488176 | 7_3:+1268971 | None:intergenic |
| AGCGGAGGAGGAAGAAGAAG+AGG | 0.489577 | 7_3:+1268983 | None:intergenic |
| TATTGGTTTACGATTATCTA+GGG | 0.491189 | 7_3:+1269175 | None:intergenic |
| GTAATGGCATTATGATTTGA+GGG | 0.494451 | 7_3:+1269017 | None:intergenic |
| GACCATCGGGATCACTTACA+AGG | 0.494906 | 7_3:+1265744 | None:intergenic |
| GGAGGAGGAAGAAGAAGAGG+GGG | 0.496753 | 7_3:+1268986 | None:intergenic |
| TTCCACCCGATCGTGCCCTC+TGG | 0.504111 | 7_3:-1268290 | Msa1088220:CDS |
| GGACTGGGACTGGGCCAGAC+CGG | 0.505741 | 7_3:+1268929 | None:intergenic |
| TTGTTGTAATTTGTAAGCCT+TGG | 0.507436 | 7_3:-1263936 | Msa1088220:three_prime_UTR |
| TGATACGTCCATCTCCGGTC+TGG | 0.510514 | 7_3:-1268943 | Msa1088220:CDS |
| AGAGGACCAGAGGGCACGAT+CGG | 0.511903 | 7_3:+1268284 | None:intergenic |
| CCAGGTATTAGATACGTTCA+AGG | 0.513591 | 7_3:-1267017 | Msa1088220:CDS |
| TGTTGTGGTTGCATTTGCAC+AGG | 0.514625 | 7_3:-1269362 | Msa1088220:five_prime_UTR |
| CACCTAAATGCATAAAATTG+GGG | 0.516855 | 7_3:+1265827 | None:intergenic |
| GAGGACCAGAGGGCACGATC+GGG | 0.517675 | 7_3:+1268285 | None:intergenic |
| GACCAGAGGGCACGATCGGG+TGG | 0.520756 | 7_3:+1268288 | None:intergenic |
| CCTCAGCTAACAATTGGGAC+TGG | 0.521487 | 7_3:+1268913 | None:intergenic |
| CGGCTCCTAGTATCCTCAAA+AGG | 0.521784 | 7_3:-1263866 | Msa1088220:three_prime_UTR |
| TTAGAACTTAGAATTTGTGT+TGG | 0.522263 | 7_3:-1269419 | Msa1088220:five_prime_UTR |
| TTGCTTTGCTGCTAATTGAG+TGG | 0.524144 | 7_3:+1269323 | None:intergenic |
| ATAGGACTGTTGAGCCAATC+GGG | 0.531109 | 7_3:+1269134 | None:intergenic |
| CGGAGGAGGAAGAAGAAGAG+GGG | 0.532719 | 7_3:+1268985 | None:intergenic |
| AATTTGTACCTGTGGACCAT+CGG | 0.532970 | 7_3:+1265730 | None:intergenic |
| CAAGGAATACCTGATTCTCC+TGG | 0.532971 | 7_3:-1268748 | Msa1088220:CDS |
| TCAAGGGATGAATGAAGTAT+TGG | 0.533142 | 7_3:-1267000 | Msa1088220:CDS |
| TAACAATTGGGACTGGGACT+GGG | 0.535698 | 7_3:+1268920 | None:intergenic |
| GTCTTGGCAAGACCAGCATA+TGG | 0.536179 | 7_3:-1267991 | Msa1088220:CDS |
| CTCAGCTAACAATTGGGACT+GGG | 0.536883 | 7_3:+1268914 | None:intergenic |
| CTGGTCTTGCCAAGACTCAA+AGG | 0.541012 | 7_3:+1267998 | None:intergenic |
| TTAGCATTGCACAGCATACC+CGG | 0.541460 | 7_3:+1264235 | None:intergenic |
| GATACTAGGAGCCGTGTAAG+TGG | 0.542145 | 7_3:+1263875 | None:intergenic |
| CTAGATCACAAATCACTCAC+GGG | 0.542734 | 7_3:-1268027 | Msa1088220:CDS |
| GCCGATGATACGTCCATCTC+CGG | 0.544643 | 7_3:-1268948 | Msa1088220:CDS |
| CGAAGAAACGTGTTCCCGAT+TGG | 0.545087 | 7_3:-1269148 | Msa1088220:CDS |
| TGTGTAGGAGACACTTCTCC+GGG | 0.545992 | 7_3:-1264253 | Msa1088220:intron |
| GAAGGAGGTTCCGATGGGTA+AGG | 0.546007 | 7_3:+1269071 | None:intergenic |
| TTGTGTAGGAGACACTTCTC+CGG | 0.547252 | 7_3:-1264254 | Msa1088220:intron |
| CCTCTTCTTTGCTAATTCAG+AGG | 0.547489 | 7_3:+1268266 | None:intergenic |
| TAGAAGTGAAATCACCAGCC+AGG | 0.547591 | 7_3:+1264193 | None:intergenic |
| GGTGGAGAAGGAGGTTCCGA+TGG | 0.551063 | 7_3:+1269065 | None:intergenic |
| TAGAGGAATTTGTGTTGTTG+TGG | 0.551743 | 7_3:-1269377 | Msa1088220:five_prime_UTR |
| CTCCGCCACTCCTTACCCAT+CGG | 0.557271 | 7_3:-1269081 | Msa1088220:CDS |
| CAGATAGTAGAACGTAAACC+AGG | 0.558115 | 7_3:+1268730 | None:intergenic |
| AGGTACCTCAGCTAACAATT+GGG | 0.559528 | 7_3:+1268908 | None:intergenic |
| TGCTAATTCAGAGGACCAGA+GGG | 0.560549 | 7_3:+1268275 | None:intergenic |
| TAATTGATAGTTATCTAGGA+AGG | 0.561350 | 7_3:-1268806 | Msa1088220:intron |
| AAGTGATCCCGATGGTCCAC+AGG | 0.563955 | 7_3:-1265738 | Msa1088220:intron |
| GTATCAATTATCCACTTACA+CGG | 0.567630 | 7_3:-1263886 | Msa1088220:three_prime_UTR |
| ACCGGAGATGGACGTATCAT+CGG | 0.569384 | 7_3:+1268947 | None:intergenic |
| TTGAGAAGAATCGCATCTCA+AGG | 0.571903 | 7_3:-1268766 | Msa1088220:CDS |
| CTTGAACGTATCTAATACCT+GGG | 0.574822 | 7_3:+1267018 | None:intergenic |
| ACGGTGACAGACGGTGGAGA+AGG | 0.581153 | 7_3:+1269053 | None:intergenic |
| CAATGCTAATTCTCGTTCGT+AGG | 0.586992 | 7_3:-1264221 | Msa1088220:CDS |
| GGCGGAGGAAGTAGAAGCGG+AGG | 0.587826 | 7_3:+1268968 | None:intergenic |
| TGGAGTTTGAATTATTACTA+CGG | 0.588873 | 7_3:+1269494 | None:intergenic |
| AGAGCTATGGCGTCATCTTG+AGG | 0.589273 | 7_3:-1266486 | Msa1088220:CDS |
| GAGGAGGAAGAAGAAGAGGG+GGG | 0.593930 | 7_3:+1268987 | None:intergenic |
| GATTACTCTCCTCTTGACTC+AGG | 0.594268 | 7_3:-1265804 | Msa1088220:CDS |
| TTCCGATGGGTAAGGAGTGG+CGG | 0.595829 | 7_3:+1269079 | None:intergenic |
| CATCAAGATCATAGTGACCA+AGG | 0.598084 | 7_3:+1263919 | None:intergenic |
| CACGTAACTTATTAGCAACA+TGG | 0.599481 | 7_3:+1264121 | None:intergenic |
| GATGGACGTATCATCGGCGG+AGG | 0.602656 | 7_3:+1268953 | None:intergenic |
| CCAGATATGCACTTCTTCTG+TGG | 0.602682 | 7_3:-1267202 | Msa1088220:CDS |
| AACAAAACAAAAGAATGTGT+CGG | 0.603828 | 7_3:+1266619 | None:intergenic |
| GGTAAGGAGTGGCGGAGAAG+CGG | 0.606722 | 7_3:+1269087 | None:intergenic |
| TCTAGATCACAAATCACTCA+CGG | 0.608684 | 7_3:-1268028 | Msa1088220:CDS |
| AAGAACATGATGAAGAGCTA+TGG | 0.611233 | 7_3:-1266499 | Msa1088220:CDS |
| ACGATGTCAAATGTGAGACA+AGG | 0.611376 | 7_3:-1268060 | Msa1088220:CDS |
| GATGTGTACGCTTTACATCA+CGG | 0.611890 | 7_3:+1267224 | None:intergenic |
| TTGCTAATTCAGAGGACCAG+AGG | 0.613667 | 7_3:+1268274 | None:intergenic |
| CGATGTCAAATGTGAGACAA+GGG | 0.615721 | 7_3:-1268059 | Msa1088220:CDS |
| AATCGAATTCCTGAGTCAAG+AGG | 0.617372 | 7_3:+1265795 | None:intergenic |
| GATATATAGTGTATAGACAG+TGG | 0.617658 | 7_3:+1269474 | None:intergenic |
| TTTACGTTCTACTATCTGGA+AGG | 0.623739 | 7_3:-1268725 | Msa1088220:intron |
| GTGACAGACGGTGGAGAAGG+AGG | 0.625461 | 7_3:+1269056 | None:intergenic |
| ATCGGCGGAGGAAGTAGAAG+CGG | 0.628290 | 7_3:+1268965 | None:intergenic |
| TGAGTGGGCCACTGTACACA+TGG | 0.630303 | 7_3:+1269339 | None:intergenic |
| ACCTAAATGCATAAAATTGG+GGG | 0.633746 | 7_3:+1265828 | None:intergenic |
| GTGGAGAAGGAGGTTCCGAT+GGG | 0.634939 | 7_3:+1269066 | None:intergenic |
| CCAGTCCCAATTGTTAGCTG+AGG | 0.637096 | 7_3:-1268913 | Msa1088220:intron |
| CCTCTGAATTAGCAAAGAAG+AGG | 0.642412 | 7_3:-1268266 | Msa1088220:CDS |
| TCTTCAACGACGGTGACAGA+CGG | 0.643240 | 7_3:+1269044 | None:intergenic |
| TGAGGGAGGATCTTCAACGA+CGG | 0.646502 | 7_3:+1269034 | None:intergenic |
| ATTGGCTCAACAGTCCTATG+TGG | 0.650294 | 7_3:-1269130 | Msa1088220:CDS |
| CAGGTATTAGATACGTTCAA+GGG | 0.657243 | 7_3:-1267016 | Msa1088220:CDS |
| TGCACAGGCCATGTGTACAG+TGG | 0.665951 | 7_3:-1269347 | Msa1088220:five_prime_UTR |
| AGGTTCCGATGGGTAAGGAG+TGG | 0.675122 | 7_3:+1269076 | None:intergenic |
| TCAACGACGGTGACAGACGG+TGG | 0.678691 | 7_3:+1269047 | None:intergenic |
| CTAGTTAGTCAGAAATCACG+AGG | 0.679263 | 7_3:-1268114 | Msa1088220:intron |
| ATGGCATTATGATTTGAGGG+AGG | 0.679668 | 7_3:+1269020 | None:intergenic |
| GATGTCAAATGTGAGACAAG+GGG | 0.689389 | 7_3:-1268058 | Msa1088220:CDS |
| CAAGGGTGTCCCAAATACGA+AGG | 0.690582 | 7_3:+1265762 | None:intergenic |
| ACCCTTGTAAGTGATCCCGA+TGG | 0.711690 | 7_3:-1265746 | Msa1088220:CDS |
| AAGTGAAATCACCAGCCAGG+AGG | 0.717321 | 7_3:+1264196 | None:intergenic |
| TCGGTGGGAGAGGACCACAT+AGG | 0.720286 | 7_3:+1269116 | None:intergenic |
| ACCATCGGGATCACTTACAA+GGG | 0.727931 | 7_3:+1265745 | None:intergenic |
| GGAGATGGACGTATCATCGG+CGG | 0.729332 | 7_3:+1268950 | None:intergenic |
| GTTAGTCAGAAATCACGAGG+AGG | 0.733374 | 7_3:-1268111 | Msa1088220:intron |
| TAGATCACAAATCACTCACG+GGG | 0.741569 | 7_3:-1268026 | Msa1088220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTAATAAAAAGAAATA+TGG | - | chr7_3:1263829-1263848 | Msa1088220:three_prime_UTR | 10.0% |
| !! | AATTCAATTATTAATATGTT+TGG | - | chr7_3:1264606-1264625 | Msa1088220:intron | 10.0% |
| !!! | ACTTTAAAAAAAAAAAAACA+AGG | + | chr7_3:1265728-1265747 | None:intergenic | 10.0% |
| !! | ACATTTATATTTATTAAGAT+CGG | + | chr7_3:1267012-1267031 | None:intergenic | 10.0% |
| !! | CATTAAATAATTTATGTATT+TGG | - | chr7_3:1268505-1268524 | Msa1088220:intron | 10.0% |
| !! | ATTCAAAAGAAAAAATGAAA+AGG | + | chr7_3:1264589-1264608 | None:intergenic | 15.0% |
| !!! | ATTATTTTCATTAGCTATTT+TGG | - | chr7_3:1264711-1264730 | Msa1088220:intron | 15.0% |
| !!! | ATATAAATTAGTCTGAATAA+CGG | + | chr7_3:1265104-1265123 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAACAAGGAA+CGG | + | chr7_3:1265723-1265742 | None:intergenic | 15.0% |
| !!! | TTAATTTTAATCGTTAACAA+AGG | - | chr7_3:1265896-1265915 | Msa1088220:intron | 15.0% |
| !!! | TTGATTTGATTTTCTTTTTT+TGG | - | chr7_3:1266187-1266206 | Msa1088220:intron | 15.0% |
| !!! | TGATTTGATTTTCTTTTTTT+GGG | - | chr7_3:1266188-1266207 | Msa1088220:intron | 15.0% |
| !!! | CTCTTTTCAAATTATTAAAA+TGG | + | chr7_3:1266860-1266879 | None:intergenic | 15.0% |
| !! | AAACATTATAAAGTAAAGTA+GGG | + | chr7_3:1268688-1268707 | None:intergenic | 15.0% |
| !! | TAAACATTATAAAGTAAAGT+AGG | + | chr7_3:1268689-1268708 | None:intergenic | 15.0% |
| !!! | TTTTTGTAGAACTAAATTAA+AGG | - | chr7_3:1268800-1268819 | Msa1088220:intron | 15.0% |
| !! | ATAAAAATGAATCTATTGTA+GGG | + | chr7_3:1268910-1268929 | None:intergenic | 15.0% |
| !! | AGTAATTTACAAACATAAAA+TGG | + | chr7_3:1269253-1269272 | None:intergenic | 15.0% |
| !!! | TATTTTGTAATACTATTCAA+AGG | - | chr7_3:1269471-1269490 | Msa1088220:five_prime_UTR | 15.0% |
| !! | AAAAGAAATATGGAGAAAAT+AGG | - | chr7_3:1263839-1263858 | Msa1088220:three_prime_UTR | 20.0% |
| !!! | TTACTAATTGATAGTTATCT+AGG | - | chr7_3:1264471-1264490 | Msa1088220:intron | 20.0% |
| !! | AAAGAAAAAATGAAAAGGTA+GGG | + | chr7_3:1264584-1264603 | None:intergenic | 20.0% |
| !! | AAAAGAAAAAATGAAAAGGT+AGG | + | chr7_3:1264585-1264604 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAACAAGGAAC+GGG | + | chr7_3:1265722-1265741 | None:intergenic | 20.0% |
| !! | GAAAATCAAATCAAAAGATA+AGG | + | chr7_3:1266181-1266200 | None:intergenic | 20.0% |
| !!! | GATTTGATTTTCTTTTTTTG+GGG | - | chr7_3:1266189-1266208 | Msa1088220:intron | 20.0% |
| !!! | ATTTGATTTTCTTTTTTTGG+GGG | - | chr7_3:1266190-1266209 | Msa1088220:intron | 20.0% |
| !! | TCAAACTTAAAGAGAAAAAA+GGG | + | chr7_3:1266385-1266404 | None:intergenic | 20.0% |
| !! | TTCAAACTTAAAGAGAAAAA+AGG | + | chr7_3:1266386-1266405 | None:intergenic | 20.0% |
| !!! | TTTAAAATTGTGTCTTACTT+TGG | + | chr7_3:1266827-1266846 | None:intergenic | 20.0% |
| !! | CACAAATTTAACAAAACATA+GGG | + | chr7_3:1266976-1266995 | None:intergenic | 20.0% |
| !! | ACACAAATTTAACAAAACAT+AGG | + | chr7_3:1266977-1266996 | None:intergenic | 20.0% |
| !! | TTGTTAATAATAACTATCTG+TGG | + | chr7_3:1267093-1267112 | None:intergenic | 20.0% |
| !!! | TTCTTCTTGTTCTTTTTTTT+TGG | - | chr7_3:1267190-1267209 | Msa1088220:CDS | 20.0% |
| !!! | TCTTCTTGTTCTTTTTTTTT+GGG | - | chr7_3:1267191-1267210 | Msa1088220:CDS | 20.0% |
| !! | TTAGATATTTCTTGAACAAA+TGG | - | chr7_3:1267214-1267233 | Msa1088220:CDS | 20.0% |
| !! | TAGATATTTCTTGAACAAAT+GGG | - | chr7_3:1267215-1267234 | Msa1088220:CDS | 20.0% |
| !!! | GAGGAAAAAAAGATTTTATT+GGG | + | chr7_3:1268009-1268028 | None:intergenic | 20.0% |
| !!! | AGAGGAAAAAAAGATTTTAT+TGG | + | chr7_3:1268010-1268029 | None:intergenic | 20.0% |
| !!! | ACAAAAGGAAATGATTTTTT+CGG | - | chr7_3:1268391-1268410 | Msa1088220:intron | 20.0% |
| !! | GATAAAAATGAATCTATTGT+AGG | + | chr7_3:1268911-1268930 | None:intergenic | 20.0% |
| !!! | TTTACTTGTAATTCTTTTAG+TGG | - | chr7_3:1268973-1268992 | Msa1088220:CDS | 20.0% |
| ! | TGGAGTTTGAATTATTACTA+CGG | + | chr7_3:1263790-1263809 | None:intergenic | 25.0% |
| ! | TTAGAACTTAGAATTTGTGT+TGG | - | chr7_3:1263862-1263881 | Msa1088220:three_prime_UTR | 25.0% |
| !!! | TAGATTTTAGAAACCAACTA+TGG | + | chr7_3:1264013-1264032 | None:intergenic | 25.0% |
| !!! | GAGATTCAATTTGTTGAAAA+AGG | + | chr7_3:1264059-1264078 | None:intergenic | 25.0% |
| !!! | TATTGGTTTACGATTATCTA+GGG | + | chr7_3:1264109-1264128 | None:intergenic | 25.0% |
| !!! | TTATTGGTTTACGATTATCT+AGG | + | chr7_3:1264110-1264129 | None:intergenic | 25.0% |
| ! | AGATAATCGTAAACCAATAA+TGG | - | chr7_3:1264110-1264129 | Msa1088220:exon | 25.0% |
| !! | TAATTGATAGTTATCTAGGA+AGG | - | chr7_3:1264475-1264494 | Msa1088220:intron | 25.0% |
| ! | CATAGTGTTAATGCTATAAA+TGG | + | chr7_3:1264649-1264668 | None:intergenic | 25.0% |
| ! | TCACAGTTATTTATCCAAAT+AGG | - | chr7_3:1264895-1264914 | Msa1088220:intron | 25.0% |
| !!! | CATACATTGTTTTTGAGTTA+AGG | + | chr7_3:1264921-1264940 | None:intergenic | 25.0% |
| ! | TTAAACACATTCAAGCAAAA+GGG | + | chr7_3:1265385-1265404 | None:intergenic | 25.0% |
| ! | ATTAAACACATTCAAGCAAA+AGG | + | chr7_3:1265386-1265405 | None:intergenic | 25.0% |
| ! | CAGTAATTATGATAAAGCAA+TGG | + | chr7_3:1265426-1265445 | None:intergenic | 25.0% |
| ! | TCAATTAGCAAAATCTAATC+AGG | - | chr7_3:1266108-1266127 | Msa1088220:intron | 25.0% |
| !! | TTTTTGAACACGTAGAATAA+AGG | + | chr7_3:1266309-1266328 | None:intergenic | 25.0% |
| ! | ATTTATTGTCCTAATTCTCT+TGG | + | chr7_3:1266425-1266444 | None:intergenic | 25.0% |
| !! | GGAAAGCTGAATTTTAAATT+TGG | + | chr7_3:1266452-1266471 | None:intergenic | 25.0% |
| !!! | GGACTTTTTGTTTACAAAAA+AGG | - | chr7_3:1266533-1266552 | Msa1088220:CDS | 25.0% |
| ! | AACAAAACAAAAGAATGTGT+CGG | + | chr7_3:1266665-1266684 | None:intergenic | 25.0% |
| ! | GTTGTTGACAAAAATTATCT+CGG | + | chr7_3:1266705-1266724 | None:intergenic | 25.0% |
| !!! | TTGAAAAGAGAAGCATTTAA+AGG | - | chr7_3:1266870-1266889 | Msa1088220:intron | 25.0% |
| !!! | TGAAAAGAGAAGCATTTAAA+GGG | - | chr7_3:1266871-1266890 | Msa1088220:intron | 25.0% |
| ! | AGAAGATATACAAACAGAAA+CGG | + | chr7_3:1267272-1267291 | None:intergenic | 25.0% |
| ! | TAATACAATACAAGGTAGAA+AGG | + | chr7_3:1267581-1267600 | None:intergenic | 25.0% |
| ! | TTTCTACCTTGTATTGTATT+AGG | - | chr7_3:1267580-1267599 | Msa1088220:intron | 25.0% |
| ! | CTTAAACCTAATACAATACA+AGG | + | chr7_3:1267589-1267608 | None:intergenic | 25.0% |
| ! | CTTGTATTGTATTAGGTTTA+AGG | - | chr7_3:1267587-1267606 | Msa1088220:intron | 25.0% |
| ! | TAGATGATCTTAGAATTAGT+TGG | - | chr7_3:1267669-1267688 | Msa1088220:intron | 25.0% |
| !!! | GTTGTTAAGTTACTTTTAGA+TGG | - | chr7_3:1267713-1267732 | Msa1088220:intron | 25.0% |
| ! | CTGTACTTGTATATTAGTAA+AGG | - | chr7_3:1267783-1267802 | Msa1088220:intron | 25.0% |
| ! | TTGTATATTAGTAAAGGACA+AGG | - | chr7_3:1267789-1267808 | Msa1088220:intron | 25.0% |
| !!! | CACAACATTTTTTGCTTATT+CGG | - | chr7_3:1268091-1268110 | Msa1088220:CDS | 25.0% |
| !! | AAAATCATTTCCTTTTGTTG+CGG | + | chr7_3:1268389-1268408 | None:intergenic | 25.0% |
| ! | ATTAACTGTCTCTTGTAAAT+AGG | + | chr7_3:1268475-1268494 | None:intergenic | 25.0% |
| !! | TACAATTTTATTGCTTCACA+CGG | - | chr7_3:1268608-1268627 | Msa1088220:intron | 25.0% |
| !! | CAACAATTCAGAATTTTATC+CGG | + | chr7_3:1268640-1268659 | None:intergenic | 25.0% |
| ! | TAATTCTTCAAGGGATAAAT+AGG | + | chr7_3:1268713-1268732 | None:intergenic | 25.0% |
| ! | TTATATACCCTGAATGTTAT+AGG | - | chr7_3:1268730-1268749 | Msa1088220:CDS | 25.0% |
| !! | AAAAAAGAGTTGATTAGTAG+TGG | - | chr7_3:1268762-1268781 | Msa1088220:CDS | 25.0% |
| ! | TTTAGTGGAAATAGAAAAAC+TGG | - | chr7_3:1268988-1269007 | Msa1088220:CDS | 25.0% |
| ! | AAATGACTAATGTTTGTAGA+AGG | + | chr7_3:1269137-1269156 | None:intergenic | 25.0% |
| ! | GTAAATTACTCTGTAAATGT+TGG | - | chr7_3:1269263-1269282 | Msa1088220:five_prime_UTR | 25.0% |
| GATATATAGTGTATAGACAG+TGG | + | chr7_3:1263810-1263829 | None:intergenic | 30.0% | |
| CTTAGAATTTGTGTTGGAAT+TGG | - | chr7_3:1263868-1263887 | Msa1088220:three_prime_UTR | 30.0% | |
| ! | TTGGAATTCATTCAAGTTAG+AGG | - | chr7_3:1263887-1263906 | Msa1088220:three_prime_UTR | 30.0% |
| TATGGTCGAAAAATGAAAAG+GGG | + | chr7_3:1263995-1264014 | None:intergenic | 30.0% | |
| CTATGGTCGAAAAATGAAAA+GGG | + | chr7_3:1263996-1264015 | None:intergenic | 30.0% | |
| ACTATGGTCGAAAAATGAAA+AGG | + | chr7_3:1263997-1264016 | None:intergenic | 30.0% | |
| !! | TTTCATTTTTCGACCATAGT+TGG | - | chr7_3:1263997-1264016 | Msa1088220:three_prime_UTR | 30.0% |
| GTAATGGCATTATGATTTGA+GGG | + | chr7_3:1264267-1264286 | None:intergenic | 30.0% | |
| AGTAATGGCATTATGATTTG+AGG | + | chr7_3:1264268-1264287 | None:intergenic | 30.0% | |
| CATTTAGATTTGAGAGTGAA+AGG | + | chr7_3:1264396-1264415 | None:intergenic | 30.0% | |
| ACACCAAAAAAAGACTGTTT+GGG | + | chr7_3:1264815-1264834 | None:intergenic | 30.0% | |
| AACACCAAAAAAAGACTGTT+TGG | + | chr7_3:1264816-1264835 | None:intergenic | 30.0% | |
| !!! | TTTTTGAGTTAAGGCCTATT+TGG | + | chr7_3:1264912-1264931 | None:intergenic | 30.0% |
| ! | TAACTTTTGCAGCTTTTCTT+AGG | - | chr7_3:1264963-1264982 | Msa1088220:intron | 30.0% |
| ! | AACTTTTGCAGCTTTTCTTA+GGG | - | chr7_3:1264964-1264983 | Msa1088220:intron | 30.0% |
| AAATCATGACCTAGTAGTTA+CGG | + | chr7_3:1265783-1265802 | None:intergenic | 30.0% | |
| TTTGTTTGCACATTAACAGT+AGG | - | chr7_3:1265805-1265824 | Msa1088220:CDS | 30.0% | |
| TAAGTTTGCATGAGTTTCAA+AGG | + | chr7_3:1266148-1266167 | None:intergenic | 30.0% | |
| CAAATCAAAAGATAAGGCTT+TGG | + | chr7_3:1266175-1266194 | None:intergenic | 30.0% | |
| TTAAAGAGAAAAAAGGGTGA+GGG | + | chr7_3:1266379-1266398 | None:intergenic | 30.0% | |
| TATTGCTTTCCAAGAGAATT+AGG | - | chr7_3:1266413-1266432 | Msa1088220:intron | 30.0% | |
| GAAATGATTAATATGTCCAC+CGG | - | chr7_3:1266501-1266520 | Msa1088220:CDS | 30.0% | |
| !! | TGTTTTGTTGAACTATTGAG+TGG | - | chr7_3:1266676-1266695 | Msa1088220:intron | 30.0% |
| CAACTTGACAATAGTATTGT+TGG | - | chr7_3:1266721-1266740 | Msa1088220:intron | 30.0% | |
| !! | ACTAGAAAGTTTGTTTCTGT+TGG | - | chr7_3:1267039-1267058 | Msa1088220:CDS | 30.0% |
| ATTAACAATAACTGTCCAGT+AGG | - | chr7_3:1267105-1267124 | Msa1088220:intron | 30.0% | |
| CTAGACAATTAATTGTGAGA+CGG | - | chr7_3:1267133-1267152 | Msa1088220:intron | 30.0% | |
| TAGACAATTAATTGTGAGAC+GGG | - | chr7_3:1267134-1267153 | Msa1088220:intron | 30.0% | |
| ATATTTCTTGAACAAATGGG+AGG | - | chr7_3:1267218-1267237 | Msa1088220:CDS | 30.0% | |
| TATTTCTTGAACAAATGGGA+GGG | - | chr7_3:1267219-1267238 | Msa1088220:CDS | 30.0% | |
| !! | CAGTTTTTCAATTCAAACTC+TGG | + | chr7_3:1267317-1267336 | None:intergenic | 30.0% |
| !!! | GTCTCTGATTAGTTTTACTT+CGG | + | chr7_3:1267353-1267372 | None:intergenic | 30.0% |
| !! | CACATCTGTTTCTAAATTTC+AGG | - | chr7_3:1267426-1267445 | Msa1088220:intron | 30.0% |
| ACCTAAATGCATAAAATTGG+GGG | + | chr7_3:1267456-1267475 | None:intergenic | 30.0% | |
| CACCTAAATGCATAAAATTG+GGG | + | chr7_3:1267457-1267476 | None:intergenic | 30.0% | |
| CCACCTAAATGCATAAAATT+GGG | + | chr7_3:1267458-1267477 | None:intergenic | 30.0% | |
| TCCACCTAAATGCATAAAAT+TGG | + | chr7_3:1267459-1267478 | None:intergenic | 30.0% | |
| AAGGAATAAATTTGTACCTG+TGG | + | chr7_3:1267562-1267581 | None:intergenic | 30.0% | |
| AGATGGAAAATATGAAGCAA+TGG | - | chr7_3:1267730-1267749 | Msa1088220:intron | 30.0% | |
| ! | AAAATATGAAGCAATGGACT+TGG | - | chr7_3:1267736-1267755 | Msa1088220:intron | 30.0% |
| !! | TTCGGTTTTGTGATTTCTAT+TGG | + | chr7_3:1267821-1267840 | None:intergenic | 30.0% |
| AATAGAAATCACAAAACCGA+AGG | - | chr7_3:1267820-1267839 | Msa1088220:intron | 30.0% | |
| !!! | TTGCTTTTTGTATGTTCCTT+CGG | + | chr7_3:1267839-1267858 | None:intergenic | 30.0% |
| CAAAAAGCAAACAGATCTTA+AGG | - | chr7_3:1267849-1267868 | Msa1088220:intron | 30.0% | |
| ACTGCTAATGTAAAAAACAC+AGG | + | chr7_3:1268291-1268310 | None:intergenic | 30.0% | |
| GTCAACTTTCTCTTGTAAAT+AGG | - | chr7_3:1268574-1268593 | Msa1088220:intron | 30.0% | |
| CAGGGTATATAATTCTTCAA+GGG | + | chr7_3:1268722-1268741 | None:intergenic | 30.0% | |
| TCAGGGTATATAATTCTTCA+AGG | + | chr7_3:1268723-1268742 | None:intergenic | 30.0% | |
| ATACGATCCTATAACATTCA+GGG | + | chr7_3:1268740-1268759 | None:intergenic | 30.0% | |
| AAATGAATCTATTGTAGGGA+AGG | + | chr7_3:1268906-1268925 | None:intergenic | 30.0% | |
| TCTCAAATTGTGTATTGAGA+AGG | - | chr7_3:1268929-1268948 | Msa1088220:CDS | 30.0% | |
| ACTAACTCTTAGTATTGTGT+AGG | - | chr7_3:1269013-1269032 | Msa1088220:CDS | 30.0% | |
| ACAAAATGCAAAAAAACAGC+TGG | + | chr7_3:1269208-1269227 | None:intergenic | 30.0% | |
| ! | TTGTTGTAATTTGTAAGCCT+TGG | - | chr7_3:1269345-1269364 | Msa1088220:five_prime_UTR | 30.0% |
| GTATCAATTATCCACTTACA+CGG | - | chr7_3:1269395-1269414 | Msa1088220:five_prime_UTR | 30.0% | |
| ! | ATCAATCTATTGTCCTTTTG+AGG | + | chr7_3:1269431-1269450 | None:intergenic | 30.0% |
| TCAAAAGGACAATAGATTGA+TGG | - | chr7_3:1269430-1269449 | Msa1088220:five_prime_UTR | 30.0% | |
| ! | TAGAGGAATTTGTGTTGTTG+TGG | - | chr7_3:1263904-1263923 | Msa1088220:three_prime_UTR | 35.0% |
| ATGGTCGAAAAATGAAAAGG+GGG | + | chr7_3:1263994-1264013 | None:intergenic | 35.0% | |
| TTTACGTTCTACTATCTGGA+AGG | - | chr7_3:1264556-1264575 | Msa1088220:intron | 35.0% | |
| !! | TAGCTATTTTGGAGAGCTTA+TGG | - | chr7_3:1264722-1264741 | Msa1088220:intron | 35.0% |
| !! | CATGTCGATAAGTTGTTTTC+AGG | + | chr7_3:1264754-1264773 | None:intergenic | 35.0% |
| !!! | TCTCCCAAACAGTCTTTTTT+TGG | - | chr7_3:1264809-1264828 | Msa1088220:intron | 35.0% |
| ! | TTTGGAACTCCGGATTATTA+GGG | + | chr7_3:1264863-1264882 | None:intergenic | 35.0% |
| ! | ATTTGGAACTCCGGATTATT+AGG | + | chr7_3:1264864-1264883 | None:intergenic | 35.0% |
| TGGATAAATAACTGTGAGAC+TGG | + | chr7_3:1264892-1264911 | None:intergenic | 35.0% | |
| CATCAATCCTGTAAGTTAGT+TGG | - | chr7_3:1265070-1265089 | Msa1088220:intron | 35.0% | |
| ATCCTGTAAGTTAGTTGGTT+TGG | - | chr7_3:1265075-1265094 | Msa1088220:intron | 35.0% | |
| AACCAAACCAACTAACTTAC+AGG | + | chr7_3:1265080-1265099 | None:intergenic | 35.0% | |
| AGCCACAAAAACATTCAGAT+GGG | + | chr7_3:1265149-1265168 | None:intergenic | 35.0% | |
| TAGCCACAAAAACATTCAGA+TGG | + | chr7_3:1265150-1265169 | None:intergenic | 35.0% | |
| TCTAGATCACAAATCACTCA+CGG | - | chr7_3:1265253-1265272 | Msa1088220:intron | 35.0% | |
| ! | GAAAAACTGATTCCATATGC+TGG | + | chr7_3:1265305-1265324 | None:intergenic | 35.0% |
| ! | CATATGGAATCAGTTTTTCC+AGG | - | chr7_3:1265306-1265325 | Msa1088220:intron | 35.0% |
| TTACTGTGTTATCTGTTGTG+AGG | - | chr7_3:1265440-1265459 | Msa1088220:intron | 35.0% | |
| !! | AGAAAAATGAAGTACCGAAC+AGG | + | chr7_3:1265533-1265552 | None:intergenic | 35.0% |
| AATCATGACCTAGTAGTTAC+GGG | + | chr7_3:1265782-1265801 | None:intergenic | 35.0% | |
| AATAACAGCTAGATCATCAG+CGG | + | chr7_3:1265870-1265889 | None:intergenic | 35.0% | |
| TCATATAATGTGCTGTACTC+TGG | - | chr7_3:1265959-1265978 | Msa1088220:intron | 35.0% | |
| CATATAATGTGCTGTACTCT+GGG | - | chr7_3:1265960-1265979 | Msa1088220:intron | 35.0% | |
| ATATAATGTGCTGTACTCTG+GGG | - | chr7_3:1265961-1265980 | Msa1088220:intron | 35.0% | |
| ! | TGTTACACTGTGTGTGTTTT+AGG | - | chr7_3:1266009-1266028 | Msa1088220:intron | 35.0% |
| GTCAATCTGCTCTATGATAT+CGG | + | chr7_3:1266038-1266057 | None:intergenic | 35.0% | |
| ATGAGTTTCAAAGGAACCAA+GGG | + | chr7_3:1266139-1266158 | None:intergenic | 35.0% | |
| ! | ATTTTTGCAAAGTTGAACCC+AGG | - | chr7_3:1266246-1266265 | Msa1088220:intron | 35.0% |
| CTTGAACGTATCTAATACCT+GGG | + | chr7_3:1266266-1266285 | None:intergenic | 35.0% | |
| CAGGTATTAGATACGTTCAA+GGG | - | chr7_3:1266265-1266284 | Msa1088220:intron | 35.0% | |
| TCAAGGGATGAATGAAGTAT+TGG | - | chr7_3:1266281-1266300 | Msa1088220:intron | 35.0% | |
| CTTAAAGAGAAAAAAGGGTG+AGG | + | chr7_3:1266380-1266399 | None:intergenic | 35.0% | |
| ! | TCATTTTCTTGCGTGTACAT+GGG | + | chr7_3:1266473-1266492 | None:intergenic | 35.0% |
| ! | TTCATTTTCTTGCGTGTACA+TGG | + | chr7_3:1266474-1266493 | None:intergenic | 35.0% |
| TGTTGCCAATTATTATACGC+AGG | - | chr7_3:1266627-1266646 | Msa1088220:CDS | 35.0% | |
| AAAGGCCTGCGTATAATAAT+TGG | + | chr7_3:1266635-1266654 | None:intergenic | 35.0% | |
| AAGAACATGATGAAGAGCTA+TGG | - | chr7_3:1266782-1266801 | Msa1088220:intron | 35.0% | |
| AGTTGACGATGAACTCAATT+TGG | - | chr7_3:1266911-1266930 | Msa1088220:intron | 35.0% | |
| AGACAATTAATTGTGAGACG+GGG | - | chr7_3:1267135-1267154 | Msa1088220:intron | 35.0% | |
| AAACTCTGGTGTCTATTACT+AGG | + | chr7_3:1267303-1267322 | None:intergenic | 35.0% | |
| TTATGTTGCTGTGTAGTAGA+AGG | - | chr7_3:1267382-1267401 | Msa1088220:intron | 35.0% | |
| ! | ACCCCCAATTTTATGCATTT+AGG | - | chr7_3:1267452-1267471 | Msa1088220:intron | 35.0% |
| ! | CCCAATTTTATGCATTTAGG+TGG | - | chr7_3:1267455-1267474 | Msa1088220:intron | 35.0% |
| !! | GGTTTTGTGATTTCTATTGG+AGG | + | chr7_3:1267818-1267837 | None:intergenic | 35.0% |
| ! | GGGATACTTATCTGAGTTTT+TGG | + | chr7_3:1267989-1268008 | None:intergenic | 35.0% |
| ! | GGTAGTTGATTCATGAATGA+AGG | - | chr7_3:1268112-1268131 | Msa1088220:intron | 35.0% |
| TGAATGAAGGTGAAAGACTA+TGG | - | chr7_3:1268125-1268144 | Msa1088220:intron | 35.0% | |
| !!! | TTTTTTTGGAGGAGTTTGCT+AGG | + | chr7_3:1268364-1268383 | None:intergenic | 35.0% |
| !! | CTTTTGTTGCGGACTTTTTT+TGG | + | chr7_3:1268378-1268397 | None:intergenic | 35.0% |
| CAAAAAAAGTCCGCAACAAA+AGG | - | chr7_3:1268376-1268395 | Msa1088220:intron | 35.0% | |
| TTCTTTGCTGAAGGACAAAA+TGG | + | chr7_3:1268439-1268458 | None:intergenic | 35.0% | |
| CTTTCTCTTGTAAATAGGAC+CGG | - | chr7_3:1268579-1268598 | Msa1088220:intron | 35.0% | |
| CAATAAAATTGTACTCCCTC+CGG | + | chr7_3:1268601-1268620 | None:intergenic | 35.0% | |
| CATACGATCCTATAACATTC+AGG | + | chr7_3:1268741-1268760 | None:intergenic | 35.0% | |
| ATACACCCTTGCACAATTAA+GGG | + | chr7_3:1268841-1268860 | None:intergenic | 35.0% | |
| AATACACCCTTGCACAATTA+AGG | + | chr7_3:1268842-1268861 | None:intergenic | 35.0% | |
| AATCTATTGTAGGGAAGGAA+AGG | + | chr7_3:1268901-1268920 | None:intergenic | 35.0% | |
| CACGTAACTTATTAGCAACA+TGG | + | chr7_3:1269163-1269182 | None:intergenic | 35.0% | |
| TACGTGTATAGTCAGTCTAA+TGG | - | chr7_3:1269177-1269196 | Msa1088220:five_prime_UTR | 35.0% | |
| AAATGGAAATGCTACGTTGA+AGG | + | chr7_3:1269236-1269255 | None:intergenic | 35.0% | |
| !! | ATTGTCCTTTTGAGGATACT+AGG | + | chr7_3:1269423-1269442 | None:intergenic | 35.0% |
| TGCTTTGCTGCTAATTGAGT+GGG | + | chr7_3:1263960-1263979 | None:intergenic | 40.0% | |
| TTGCTTTGCTGCTAATTGAG+TGG | + | chr7_3:1263961-1263980 | None:intergenic | 40.0% | |
| TTAGCAGCAAAGCAACTTCT+AGG | - | chr7_3:1263966-1263985 | Msa1088220:three_prime_UTR | 40.0% | |
| ACACGTTTCTTCGCCATTAT+TGG | + | chr7_3:1264126-1264145 | None:intergenic | 40.0% | |
| ATGGCATTATGATTTGAGGG+AGG | + | chr7_3:1264264-1264283 | None:intergenic | 40.0% | |
| AGGTACCTCAGCTAACAATT+GGG | + | chr7_3:1264376-1264395 | None:intergenic | 40.0% | |
| ! | AAGGTACCTCAGCTAACAAT+TGG | + | chr7_3:1264377-1264396 | None:intergenic | 40.0% |
| TTGAGAAGAATCGCATCTCA+AGG | - | chr7_3:1264515-1264534 | Msa1088220:intron | 40.0% | |
| CAGATAGTAGAACGTAAACC+AGG | + | chr7_3:1264554-1264573 | None:intergenic | 40.0% | |
| CTGGTTTACGTTCTACTATC+TGG | - | chr7_3:1264552-1264571 | Msa1088220:intron | 40.0% | |
| TTCCATAAGCTCGTTTCCAT+AGG | - | chr7_3:1264785-1264804 | Msa1088220:intron | 40.0% | |
| !!! | GTCTTTTTTTGGTGTTACCC+CGG | - | chr7_3:1264820-1264839 | Msa1088220:intron | 40.0% |
| CCTCTTCTTTGCTAATTCAG+AGG | + | chr7_3:1265018-1265037 | None:intergenic | 40.0% | |
| CCTCTGAATTAGCAAAGAAG+AGG | - | chr7_3:1265015-1265034 | Msa1088220:intron | 40.0% | |
| !! | CTCCCATCTGAATGTTTTTG+TGG | - | chr7_3:1265144-1265163 | Msa1088220:intron | 40.0% |
| CTAGTTAGTCAGAAATCACG+AGG | - | chr7_3:1265167-1265186 | Msa1088220:intron | 40.0% | |
| ACGATGTCAAATGTGAGACA+AGG | - | chr7_3:1265221-1265240 | Msa1088220:intron | 40.0% | |
| CGATGTCAAATGTGAGACAA+GGG | - | chr7_3:1265222-1265241 | Msa1088220:intron | 40.0% | |
| GATGTCAAATGTGAGACAAG+GGG | - | chr7_3:1265223-1265242 | Msa1088220:intron | 40.0% | |
| CTAGATCACAAATCACTCAC+GGG | - | chr7_3:1265254-1265273 | Msa1088220:intron | 40.0% | |
| TAGATCACAAATCACTCACG+GGG | - | chr7_3:1265255-1265274 | Msa1088220:intron | 40.0% | |
| AGTCTGCATAGACTATTACC+TGG | + | chr7_3:1265327-1265346 | None:intergenic | 40.0% | |
| !! | AATGAAGTACCGAACAGGTA+TGG | + | chr7_3:1265528-1265547 | None:intergenic | 40.0% |
| CACATTAACAGTAGGTCTTG+AGG | - | chr7_3:1265813-1265832 | Msa1088220:CDS | 40.0% | |
| GCTGATGATCTAGCTGTTAT+TGG | - | chr7_3:1265869-1265888 | Msa1088220:intron | 40.0% | |
| GATGTGTACGCTTTACATCA+CGG | + | chr7_3:1266060-1266079 | None:intergenic | 40.0% | |
| ! | ATCTAATCAGGTTGTTCCCT+TGG | - | chr7_3:1266120-1266139 | Msa1088220:intron | 40.0% |
| CATGAGTTTCAAAGGAACCA+AGG | + | chr7_3:1266140-1266159 | None:intergenic | 40.0% | |
| !!! | CTTTTTTTGGGGGCATTTTC+AGG | - | chr7_3:1266200-1266219 | Msa1088220:intron | 40.0% |
| CCTTGAACGTATCTAATACC+TGG | + | chr7_3:1266267-1266286 | None:intergenic | 40.0% | |
| CCAGGTATTAGATACGTTCA+AGG | - | chr7_3:1266264-1266283 | Msa1088220:intron | 40.0% | |
| CAAAAAGTCCGTCAACATTC+CGG | + | chr7_3:1266523-1266542 | None:intergenic | 40.0% | |
| AGTTCATCGTCAACTTTCTC+AGG | + | chr7_3:1266906-1266925 | None:intergenic | 40.0% | |
| GACGATGAACTCAATTTGGT+TGG | - | chr7_3:1266915-1266934 | Msa1088220:intron | 40.0% | |
| AGACGGGGTAGAAATGAATA+GGG | - | chr7_3:1267150-1267169 | Msa1088220:intron | 40.0% | |
| AATAGGGAGGAGAAGTTTGT+TGG | - | chr7_3:1267166-1267185 | Msa1088220:intron | 40.0% | |
| GAGATGAAGATTGCAGAGAA+CGG | + | chr7_3:1267250-1267269 | None:intergenic | 40.0% | |
| AATCGAATTCCTGAGTCAAG+AGG | + | chr7_3:1267489-1267508 | None:intergenic | 40.0% | |
| AATTTGTACCTGTGGACCAT+CGG | + | chr7_3:1267554-1267573 | None:intergenic | 40.0% | |
| ! | TGGACTTGGCTCTTATAAAG+TGG | - | chr7_3:1267750-1267769 | Msa1088220:intron | 40.0% |
| ! | GGACTTGGCTCTTATAAAGT+GGG | - | chr7_3:1267751-1267770 | Msa1088220:intron | 40.0% |
| ! | GACTTGGCTCTTATAAAGTG+GGG | - | chr7_3:1267752-1267771 | Msa1088220:intron | 40.0% |
| ! | ACTTGGCTCTTATAAAGTGG+GGG | - | chr7_3:1267753-1267772 | Msa1088220:intron | 40.0% |
| ! | TTTTTCCTCTTCGCTCTATG+AGG | - | chr7_3:1268020-1268039 | Msa1088220:CDS | 40.0% |
| TTAATCCTCATAGAGCGAAG+AGG | + | chr7_3:1268028-1268047 | None:intergenic | 40.0% | |
| !! | AAAGCATTGACGATCAACGA+GGG | - | chr7_3:1268057-1268076 | Msa1088220:CDS | 40.0% |
| TTGCTAGGAGCTATGAAACA+CGG | + | chr7_3:1268349-1268368 | None:intergenic | 40.0% | |
| !!! | TTGTTGCGGACTTTTTTTGG+AGG | + | chr7_3:1268375-1268394 | None:intergenic | 40.0% |
| CTGTCTCTTGTAAATAGGAC+CGG | + | chr7_3:1268470-1268489 | None:intergenic | 40.0% | |
| TGTTGCCCTTAATTGTGCAA+GGG | - | chr7_3:1268833-1268852 | Msa1088220:intron | 40.0% | |
| TTGTGTATTGAGAAGGAGCA+TGG | - | chr7_3:1268936-1268955 | Msa1088220:CDS | 40.0% | |
| ! | TGTGTATTGAGAAGGAGCAT+GGG | - | chr7_3:1268937-1268956 | Msa1088220:CDS | 40.0% |
| CAATGCTAATTCTCGTTCGT+AGG | - | chr7_3:1269060-1269079 | Msa1088220:CDS | 40.0% | |
| CATCAAGATCATAGTGACCA+AGG | + | chr7_3:1269365-1269384 | None:intergenic | 40.0% | |
| TGTTGTGGTTGCATTTGCAC+AGG | - | chr7_3:1263919-1263938 | Msa1088220:three_prime_UTR | 45.0% | |
| ATAGGACTGTTGAGCCAATC+GGG | + | chr7_3:1264150-1264169 | None:intergenic | 45.0% | |
| CATAGGACTGTTGAGCCAAT+CGG | + | chr7_3:1264151-1264170 | None:intergenic | 45.0% | |
| ! | ATTGGCTCAACAGTCCTATG+TGG | - | chr7_3:1264151-1264170 | Msa1088220:CDS | 45.0% |
| TAACAATTGGGACTGGGACT+GGG | + | chr7_3:1264364-1264383 | None:intergenic | 45.0% | |
| CTCAGCTAACAATTGGGACT+GGG | + | chr7_3:1264370-1264389 | None:intergenic | 45.0% | |
| CAAGGAATACCTGATTCTCC+TGG | - | chr7_3:1264533-1264552 | Msa1088220:intron | 45.0% | |
| GAACGTAAACCAGGAGAATC+AGG | + | chr7_3:1264545-1264564 | None:intergenic | 45.0% | |
| AGCCTATGGAAACGAGCTTA+TGG | + | chr7_3:1264790-1264809 | None:intergenic | 45.0% | |
| ! | CTGGCACTTATTTGGAACTC+CGG | + | chr7_3:1264873-1264892 | None:intergenic | 45.0% |
| CTGTGAGACTGGCACTTATT+TGG | + | chr7_3:1264881-1264900 | None:intergenic | 45.0% | |
| TGCTAATTCAGAGGACCAGA+GGG | + | chr7_3:1265009-1265028 | None:intergenic | 45.0% | |
| TTGCTAATTCAGAGGACCAG+AGG | + | chr7_3:1265010-1265029 | None:intergenic | 45.0% | |
| GTTAGTCAGAAATCACGAGG+AGG | - | chr7_3:1265170-1265189 | Msa1088220:intron | 45.0% | |
| TGTGCTCTTCATGTCATGAC+TGG | - | chr7_3:1265494-1265513 | Msa1088220:intron | 45.0% | |
| TGACCTAGTAGTTACGGGTA+CGG | + | chr7_3:1265777-1265796 | None:intergenic | 45.0% | |
| ! | CCACAGAAGAAGTGCATATC+TGG | + | chr7_3:1266082-1266101 | None:intergenic | 45.0% |
| CCAGATATGCACTTCTTCTG+TGG | - | chr7_3:1266079-1266098 | Msa1088220:intron | 45.0% | |
| !!! | TTTTTGGGGGCATTTTCAGG+AGG | - | chr7_3:1266203-1266222 | Msa1088220:intron | 45.0% |
| GTTCAAAAATGATCCCGACG+AGG | - | chr7_3:1266320-1266339 | Msa1088220:intron | 45.0% | |
| ! | ACTCACTGCATTTTCCTCGT+CGG | + | chr7_3:1266337-1266356 | None:intergenic | 45.0% |
| TATGTCCACCGGAATGTTGA+CGG | - | chr7_3:1266512-1266531 | Msa1088220:CDS | 45.0% | |
| !! | GAATGTGTCGGCTTCAGAAA+AGG | + | chr7_3:1266653-1266672 | None:intergenic | 45.0% |
| AAAACATAGGGCAGCTTCAC+AGG | + | chr7_3:1266964-1266983 | None:intergenic | 45.0% | |
| AATTGTCTAGTGCAGCCTAC+TGG | + | chr7_3:1267123-1267142 | None:intergenic | 45.0% | |
| GAGACGGGGTAGAAATGAAT+AGG | - | chr7_3:1267149-1267168 | Msa1088220:intron | 45.0% | |
| GATTACTCTCCTCTTGACTC+AGG | - | chr7_3:1267477-1267496 | Msa1088220:intron | 45.0% | |
| TTGCTGACAGCCTTCGTATT+TGG | - | chr7_3:1267509-1267528 | Msa1088220:intron | 45.0% | |
| TGCTGACAGCCTTCGTATTT+GGG | - | chr7_3:1267510-1267529 | Msa1088220:intron | 45.0% | |
| ACCATCGGGATCACTTACAA+GGG | + | chr7_3:1267539-1267558 | None:intergenic | 45.0% | |
| ATTTGTACCTGTGGACCATC+GGG | + | chr7_3:1267553-1267572 | None:intergenic | 45.0% | |
| CCATTCTTCATGACCTAGGA+GGG | + | chr7_3:1267903-1267922 | None:intergenic | 45.0% | |
| TCCATTCTTCATGACCTAGG+AGG | + | chr7_3:1267904-1267923 | None:intergenic | 45.0% | |
| GTGTCCATTCTTCATGACCT+AGG | + | chr7_3:1267907-1267926 | None:intergenic | 45.0% | |
| CATGAAGAATGGACACCTGT+AGG | - | chr7_3:1267911-1267930 | Msa1088220:intron | 45.0% | |
| GAATGGACACCTGTAGGATT+AGG | - | chr7_3:1267917-1267936 | Msa1088220:intron | 45.0% | |
| !! | CAAAGCATTGACGATCAACG+AGG | - | chr7_3:1268056-1268075 | Msa1088220:CDS | 45.0% |
| !! | AAGCATTGACGATCAACGAG+GGG | - | chr7_3:1268058-1268077 | Msa1088220:CDS | 45.0% |
| CAGTGTTAACGTGTCTGTGT+CGG | - | chr7_3:1268307-1268326 | Msa1088220:CDS | 45.0% | |
| TGAAACACGGACACAGACAT+GGG | + | chr7_3:1268336-1268355 | None:intergenic | 45.0% | |
| ATGAAACACGGACACAGACA+TGG | + | chr7_3:1268337-1268356 | None:intergenic | 45.0% | |
| !! | GAGGGAGTATTCTTTGCTGA+AGG | + | chr7_3:1268448-1268467 | None:intergenic | 45.0% |
| TCAGCAAAGAATACTCCCTC+CGG | - | chr7_3:1268448-1268467 | Msa1088220:intron | 45.0% | |
| CTCTTGTAAATAGGACCGGA+GGG | + | chr7_3:1268583-1268602 | None:intergenic | 45.0% | |
| TCTCTTGTAAATAGGACCGG+AGG | + | chr7_3:1268582-1268601 | None:intergenic | 45.0% | |
| TCTCTTGTAAATAGGACCGG+AGG | - | chr7_3:1268582-1268601 | Msa1088220:intron | 45.0% | |
| CTCTTGTAAATAGGACCGGA+GGG | - | chr7_3:1268583-1268602 | Msa1088220:intron | 45.0% | |
| ! | TTGCTTCACACGGCTTTTAC+CGG | - | chr7_3:1268618-1268637 | Msa1088220:intron | 45.0% |
| GTGTTGCCCTTAATTGTGCA+AGG | - | chr7_3:1268832-1268851 | Msa1088220:intron | 45.0% | |
| TTGTGTAGGAGACACTTCTC+CGG | - | chr7_3:1269027-1269046 | Msa1088220:CDS | 45.0% | |
| TTAGCATTGCACAGCATACC+CGG | + | chr7_3:1269049-1269068 | None:intergenic | 45.0% | |
| TAGAAGTGAAATCACCAGCC+AGG | + | chr7_3:1269091-1269110 | None:intergenic | 45.0% | |
| !! | CATAATAAATAAATATATAT+TGG | - | chr7_3:1268262-1268281 | Msa1088220:CDS | 5.0% |
| CGAAGAAACGTGTTCCCGAT+TGG | - | chr7_3:1264133-1264152 | Msa1088220:CDS | 50.0% | |
| !!! | GAGAAGCGGTTTTGTTCGGT+GGG | + | chr7_3:1264183-1264202 | None:intergenic | 50.0% |
| TCTTCAACGACGGTGACAGA+CGG | + | chr7_3:1264240-1264259 | None:intergenic | 50.0% | |
| TGAGGGAGGATCTTCAACGA+CGG | + | chr7_3:1264250-1264269 | None:intergenic | 50.0% | |
| AGAGGGGGGTGAAGTAGTAA+TGG | + | chr7_3:1264283-1264302 | None:intergenic | 50.0% | |
| ACCGGAGATGGACGTATCAT+CGG | + | chr7_3:1264337-1264356 | None:intergenic | 50.0% | |
| CTAACAATTGGGACTGGGAC+TGG | + | chr7_3:1264365-1264384 | None:intergenic | 50.0% | |
| CCTCAGCTAACAATTGGGAC+TGG | + | chr7_3:1264371-1264390 | None:intergenic | 50.0% | |
| CCAGTCCCAATTGTTAGCTG+AGG | - | chr7_3:1264368-1264387 | Msa1088220:intron | 50.0% | |
| AGACTGTTTGGGAGAGCCTA+TGG | + | chr7_3:1264804-1264823 | None:intergenic | 50.0% | |
| !! | TTTGGTGTTACCCCGGTTAC+CGG | - | chr7_3:1264827-1264846 | Msa1088220:intron | 50.0% |
| GGAATGGGGCCCTAATAATC+CGG | - | chr7_3:1264851-1264870 | Msa1088220:intron | 50.0% | |
| GGGGAACATCCTTTGAGTCT+TGG | - | chr7_3:1265274-1265293 | Msa1088220:intron | 50.0% | |
| !! | CTGGTCTTGCCAAGACTCAA+AGG | + | chr7_3:1265286-1265305 | None:intergenic | 50.0% |
| GTCTTGGCAAGACCAGCATA+TGG | - | chr7_3:1265290-1265309 | Msa1088220:intron | 50.0% | |
| !! | AAAGTGCCGCATTTCGTACC+CGG | - | chr7_3:1265743-1265762 | Msa1088220:CDS | 50.0% |
| GTACCGTACCCGTAACTACT+AGG | - | chr7_3:1265771-1265790 | Msa1088220:CDS | 50.0% | |
| GGAGTGAAGAGCTATCGTGA+TGG | - | chr7_3:1265982-1266001 | Msa1088220:intron | 50.0% | |
| ! | CTCACTGCATTTTCCTCGTC+GGG | + | chr7_3:1266336-1266355 | None:intergenic | 50.0% |
| AAAGTCCGTCAACATTCCGG+TGG | + | chr7_3:1266520-1266539 | None:intergenic | 50.0% | |
| AGAGCTATGGCGTCATCTTG+AGG | - | chr7_3:1266795-1266814 | Msa1088220:intron | 50.0% | |
| CGGGGTAGAAATGAATAGGG+AGG | - | chr7_3:1267153-1267172 | Msa1088220:intron | 50.0% | |
| !! | CAAGGGTGTCCCAAATACGA+AGG | + | chr7_3:1267522-1267541 | None:intergenic | 50.0% |
| ACCCTTGTAAGTGATCCCGA+TGG | - | chr7_3:1267535-1267554 | Msa1088220:intron | 50.0% | |
| GACCATCGGGATCACTTACA+AGG | + | chr7_3:1267540-1267559 | None:intergenic | 50.0% | |
| CCCTCCTAGGTCATGAAGAA+TGG | - | chr7_3:1267900-1267919 | Msa1088220:intron | 50.0% | |
| ! | TGTCGAGTGTTGCACACTGA+CGG | + | chr7_3:1267961-1267980 | None:intergenic | 50.0% |
| TGTGTAGGAGACACTTCTCC+GGG | - | chr7_3:1269028-1269047 | Msa1088220:CDS | 50.0% | |
| AAGTGAAATCACCAGCCAGG+AGG | + | chr7_3:1269088-1269107 | None:intergenic | 50.0% | |
| GATACTAGGAGCCGTGTAAG+TGG | + | chr7_3:1269409-1269428 | None:intergenic | 50.0% | |
| CGGCTCCTAGTATCCTCAAA+AGG | - | chr7_3:1269415-1269434 | Msa1088220:five_prime_UTR | 50.0% | |
| TGCACAGGCCATGTGTACAG+TGG | - | chr7_3:1263934-1263953 | Msa1088220:three_prime_UTR | 55.0% | |
| TGAGTGGGCCACTGTACACA+TGG | + | chr7_3:1263945-1263964 | None:intergenic | 55.0% | |
| !!! | GGAGAAGCGGTTTTGTTCGG+TGG | + | chr7_3:1264184-1264203 | None:intergenic | 55.0% |
| !!! | GGCGGAGAAGCGGTTTTGTT+CGG | + | chr7_3:1264187-1264206 | None:intergenic | 55.0% |
| TTCCGATGGGTAAGGAGTGG+CGG | + | chr7_3:1264205-1264224 | None:intergenic | 55.0% | |
| AGGTTCCGATGGGTAAGGAG+TGG | + | chr7_3:1264208-1264227 | None:intergenic | 55.0% | |
| GAAGGAGGTTCCGATGGGTA+AGG | + | chr7_3:1264213-1264232 | None:intergenic | 55.0% | |
| GTGGAGAAGGAGGTTCCGAT+GGG | + | chr7_3:1264218-1264237 | None:intergenic | 55.0% | |
| GAGGAGGAAGAAGAAGAGGG+GGG | + | chr7_3:1264297-1264316 | None:intergenic | 55.0% | |
| GGAGGAGGAAGAAGAAGAGG+GGG | + | chr7_3:1264298-1264317 | None:intergenic | 55.0% | |
| CGGAGGAGGAAGAAGAAGAG+GGG | + | chr7_3:1264299-1264318 | None:intergenic | 55.0% | |
| GCGGAGGAGGAAGAAGAAGA+GGG | + | chr7_3:1264300-1264319 | None:intergenic | 55.0% | |
| AGCGGAGGAGGAAGAAGAAG+AGG | + | chr7_3:1264301-1264320 | None:intergenic | 55.0% | |
| ATCGGCGGAGGAAGTAGAAG+CGG | + | chr7_3:1264319-1264338 | None:intergenic | 55.0% | |
| GGAGATGGACGTATCATCGG+CGG | + | chr7_3:1264334-1264353 | None:intergenic | 55.0% | |
| GCCGATGATACGTCCATCTC+CGG | - | chr7_3:1264333-1264352 | Msa1088220:intron | 55.0% | |
| TGATACGTCCATCTCCGGTC+TGG | - | chr7_3:1264338-1264357 | Msa1088220:intron | 55.0% | |
| !! | TTGGTGTTACCCCGGTTACC+GGG | - | chr7_3:1264828-1264847 | Msa1088220:intron | 55.0% |
| TTATTAGGGCCCCATTCCCC+CGG | + | chr7_3:1264849-1264868 | None:intergenic | 55.0% | |
| GTACGCGTGCCATACCTGTT+CGG | - | chr7_3:1265516-1265535 | Msa1088220:intron | 55.0% | |
| AAGTGATCCCGATGGTCCAC+AGG | - | chr7_3:1267543-1267562 | Msa1088220:intron | 55.0% | |
| ! | GGAGGCACACCTAATCCTAC+AGG | + | chr7_3:1267929-1267948 | None:intergenic | 55.0% |
| ! | GTTGCACACTGACGGGTGTT+GGG | + | chr7_3:1267953-1267972 | None:intergenic | 55.0% |
| ! | TGTTGCACACTGACGGGTGT+TGG | + | chr7_3:1267954-1267973 | None:intergenic | 55.0% |
| ! | GTCGAGTGTTGCACACTGAC+GGG | + | chr7_3:1267960-1267979 | None:intergenic | 55.0% |
| TCGGTGGGAGAGGACCACAT+AGG | + | chr7_3:1264168-1264187 | None:intergenic | 60.0% | |
| !!! | GCGGTTTTGTTCGGTGGGAG+AGG | + | chr7_3:1264178-1264197 | None:intergenic | 60.0% |
| ! | GGTAAGGAGTGGCGGAGAAG+CGG | + | chr7_3:1264197-1264216 | None:intergenic | 60.0% |
| CTCCGCCACTCCTTACCCAT+CGG | - | chr7_3:1264200-1264219 | Msa1088220:CDS | 60.0% | |
| GGTGGAGAAGGAGGTTCCGA+TGG | + | chr7_3:1264219-1264238 | None:intergenic | 60.0% | |
| GTGACAGACGGTGGAGAAGG+AGG | + | chr7_3:1264228-1264247 | None:intergenic | 60.0% | |
| ACGGTGACAGACGGTGGAGA+AGG | + | chr7_3:1264231-1264250 | None:intergenic | 60.0% | |
| TCAACGACGGTGACAGACGG+TGG | + | chr7_3:1264237-1264256 | None:intergenic | 60.0% | |
| GGAGGAAGTAGAAGCGGAGG+AGG | + | chr7_3:1264313-1264332 | None:intergenic | 60.0% | |
| GATGGACGTATCATCGGCGG+AGG | + | chr7_3:1264331-1264350 | None:intergenic | 60.0% | |
| !! | TGGTGTTACCCCGGTTACCG+GGG | - | chr7_3:1264829-1264848 | Msa1088220:intron | 60.0% |
| ! | AGAGGACCAGAGGGCACGAT+CGG | + | chr7_3:1265000-1265019 | None:intergenic | 60.0% |
| CCGCTACCGGGTACGAAATG+CGG | + | chr7_3:1265752-1265771 | None:intergenic | 60.0% | |
| CCGCATTTCGTACCCGGTAG+CGG | - | chr7_3:1265749-1265768 | Msa1088220:CDS | 60.0% | |
| TACGGGTACGGTACCGCTAC+CGG | + | chr7_3:1265765-1265784 | None:intergenic | 60.0% | |
| AGGGTGAGGGAGAGCTTGCA+AGG | + | chr7_3:1266366-1266385 | None:intergenic | 60.0% | |
| GACCTAGGAGGGCTCTACGA+GGG | + | chr7_3:1267892-1267911 | None:intergenic | 60.0% | |
| TGACCTAGGAGGGCTCTACG+AGG | + | chr7_3:1267893-1267912 | None:intergenic | 60.0% | |
| GGCGGAGGAAGTAGAAGCGG+AGG | + | chr7_3:1264316-1264335 | None:intergenic | 65.0% | |
| ! | GGTGTTACCCCGGTTACCGG+GGG | - | chr7_3:1264830-1264849 | Msa1088220:intron | 65.0% |
| TACCCCGGTTACCGGGGGAA+TGG | - | chr7_3:1264835-1264854 | Msa1088220:intron | 65.0% | |
| ACCCCGGTTACCGGGGGAAT+GGG | - | chr7_3:1264836-1264855 | Msa1088220:intron | 65.0% | |
| TTCCACCCGATCGTGCCCTC+TGG | - | chr7_3:1264991-1265010 | Msa1088220:intron | 65.0% | |
| ! | GAGGACCAGAGGGCACGATC+GGG | + | chr7_3:1264999-1265018 | None:intergenic | 65.0% |
| ACGGGTACGGTACCGCTACC+GGG | + | chr7_3:1265764-1265783 | None:intergenic | 65.0% | |
| CTAGGAGGGCTCTACGAGGG+TGG | + | chr7_3:1267889-1267908 | None:intergenic | 65.0% | |
| CACCCTCGTAGAGCCCTCCT+AGG | - | chr7_3:1267887-1267906 | Msa1088220:intron | 65.0% | |
| !! | GCACACTGACGGGTGTTGGG+CGG | + | chr7_3:1267950-1267969 | None:intergenic | 65.0% |
| TCTCGTTCGTAGGCGCCTCC+TGG | - | chr7_3:1269070-1269089 | Msa1088220:CDS | 65.0% | |
| GGACTGGGCCAGACCGGAGA+TGG | + | chr7_3:1264349-1264368 | None:intergenic | 70.0% | |
| GGACTGGGACTGGGCCAGAC+CGG | + | chr7_3:1264355-1264374 | None:intergenic | 70.0% | |
| CCCCATTCCCCCGGTAACCG+GGG | + | chr7_3:1264840-1264859 | None:intergenic | 70.0% | |
| CCCCGGTTACCGGGGGAATG+GGG | - | chr7_3:1264837-1264856 | Msa1088220:intron | 70.0% | |
| GCCCCATTCCCCCGGTAACC+GGG | + | chr7_3:1264841-1264860 | None:intergenic | 70.0% | |
| GGCCCCATTCCCCCGGTAAC+CGG | + | chr7_3:1264842-1264861 | None:intergenic | 70.0% | |
| ! | GACCAGAGGGCACGATCGGG+TGG | + | chr7_3:1264996-1265015 | None:intergenic | 70.0% |
| !! | CACTGACGGGTGTTGGGCGG+AGG | + | chr7_3:1267947-1267966 | None:intergenic | 70.0% |
| GTTCGTAGGCGCCTCCTGGC+TGG | - | chr7_3:1269074-1269093 | Msa1088220:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 1263787 | 1269516 | 1263787 | ID=Msa1088220;Name=Msa1088220 |
| chr7_3 | mRNA | 1263787 | 1269516 | 1263787 | ID=Msa1088220-mRNA-1;Parent=Msa1088220;Name=Msa1088220-mRNA-1;_AED=0.09;_eAED=0.09;_QI=342|1|1|1|1|1|9|329|429 |
| chr7_3 | exon | 1263787 | 1264268 | 1263787 | ID=Msa1088220-mRNA-1:exon:512;Parent=Msa1088220-mRNA-1 |
| chr7_3 | exon | 1265739 | 1265855 | 1265739 | ID=Msa1088220-mRNA-1:exon:511;Parent=Msa1088220-mRNA-1 |
| chr7_3 | exon | 1266475 | 1266654 | 1266475 | ID=Msa1088220-mRNA-1:exon:510;Parent=Msa1088220-mRNA-1 |
| chr7_3 | exon | 1266953 | 1267081 | 1266953 | ID=Msa1088220-mRNA-1:exon:509;Parent=Msa1088220-mRNA-1 |
| chr7_3 | exon | 1267174 | 1267272 | 1267174 | ID=Msa1088220-mRNA-1:exon:508;Parent=Msa1088220-mRNA-1 |
| chr7_3 | exon | 1267976 | 1268128 | 1267976 | ID=Msa1088220-mRNA-1:exon:507;Parent=Msa1088220-mRNA-1 |
| chr7_3 | exon | 1268224 | 1268328 | 1268224 | ID=Msa1088220-mRNA-1:exon:506;Parent=Msa1088220-mRNA-1 |
| chr7_3 | exon | 1268726 | 1268818 | 1268726 | ID=Msa1088220-mRNA-1:exon:505;Parent=Msa1088220-mRNA-1 |
| chr7_3 | exon | 1268914 | 1269516 | 1268914 | ID=Msa1088220-mRNA-1:exon:504;Parent=Msa1088220-mRNA-1 |
| chr7_3 | five_prime_UTR | 1269175 | 1269516 | 1269175 | ID=Msa1088220-mRNA-1:five_prime_utr;Parent=Msa1088220-mRNA-1 |
| chr7_3 | CDS | 1268914 | 1269174 | 1268914 | ID=Msa1088220-mRNA-1:cds;Parent=Msa1088220-mRNA-1 |
| chr7_3 | CDS | 1268726 | 1268818 | 1268726 | ID=Msa1088220-mRNA-1:cds;Parent=Msa1088220-mRNA-1 |
| chr7_3 | CDS | 1268224 | 1268328 | 1268224 | ID=Msa1088220-mRNA-1:cds;Parent=Msa1088220-mRNA-1 |
| chr7_3 | CDS | 1267976 | 1268128 | 1267976 | ID=Msa1088220-mRNA-1:cds;Parent=Msa1088220-mRNA-1 |
| chr7_3 | CDS | 1267174 | 1267272 | 1267174 | ID=Msa1088220-mRNA-1:cds;Parent=Msa1088220-mRNA-1 |
| chr7_3 | CDS | 1266953 | 1267081 | 1266953 | ID=Msa1088220-mRNA-1:cds;Parent=Msa1088220-mRNA-1 |
| chr7_3 | CDS | 1266475 | 1266654 | 1266475 | ID=Msa1088220-mRNA-1:cds;Parent=Msa1088220-mRNA-1 |
| chr7_3 | CDS | 1265739 | 1265855 | 1265739 | ID=Msa1088220-mRNA-1:cds;Parent=Msa1088220-mRNA-1 |
| chr7_3 | CDS | 1264116 | 1264268 | 1264116 | ID=Msa1088220-mRNA-1:cds;Parent=Msa1088220-mRNA-1 |
| chr7_3 | three_prime_UTR | 1263787 | 1264115 | 1263787 | ID=Msa1088220-mRNA-1:three_prime_utr;Parent=Msa1088220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
