Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421330 | XP_003601640.1 | 97.902 | 429 | 9 | 0 | 1 | 429 | 1 | 429 | 0.0 | 866 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421330 | sp|Q9NVG8|TBC13_HUMAN | 49.490 | 196 | 97 | 2 | 233 | 428 | 204 | 397 | 4.18e-60 | 204 |
| Msa0421330 | sp|Q9NVG8|TBC13_HUMAN | 37.313 | 134 | 67 | 1 | 93 | 226 | 21 | 137 | 3.03e-21 | 98.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421330 | G7JA63 | 97.902 | 429 | 9 | 0 | 1 | 429 | 1 | 429 | 0.0 | 866 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008840 | Msa0421330 | -0.805912 | 1.061386e-49 | -8.615850e-47 |
| Msa0175290 | Msa0421330 | 0.808364 | 3.212421e-50 | -8.615850e-47 |
| Msa0183870 | Msa0421330 | -0.811724 | 6.067832e-51 | -8.615850e-47 |
| Msa0421330 | Msa0467260 | 0.811636 | 6.341748e-51 | -8.615850e-47 |
| Msa0421330 | Msa0524600 | -0.810605 | 1.060577e-50 | -8.615850e-47 |
| Msa0421330 | Msa0687230 | -0.817132 | 3.864316e-52 | -8.615850e-47 |
| Msa0421330 | Msa0790170 | 0.801164 | 1.024293e-48 | -8.615850e-47 |
| Msa0421330 | Msa0799010 | 0.810842 | 9.426165e-51 | -8.615850e-47 |
| Msa0421330 | Msa0820530 | 0.814297 | 1.655371e-51 | -8.615850e-47 |
| Msa0421330 | Msa0879860 | -0.812791 | 3.549827e-51 | -8.615850e-47 |
| Msa0421330 | Msa0924150 | 0.817983 | 2.484185e-52 | -8.615850e-47 |
| Msa0421330 | Msa0947530 | 0.803287 | 3.746891e-49 | -8.615850e-47 |
| Msa0421330 | Msa1002600 | 0.815893 | 7.321644e-52 | -8.615850e-47 |
| Msa0421330 | Msa1088220 | 0.871801 | 5.180349e-67 | -8.615850e-47 |
| Msa0421330 | Msa1088250 | 0.807408 | 5.130149e-50 | -8.615850e-47 |
| Msa0421330 | Msa1253400 | -0.806052 | 9.920659e-50 | -8.615850e-47 |
| Msa0421330 | Msa1418960 | 0.801445 | 8.972772e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421330 | MtrunA17_Chr3g0121451 | 97.902 | 429 | 9 | 0 | 1 | 429 | 1 | 429 | 0.0 | 866 |
| Msa0421330 | MtrunA17_Chr8g0378291 | 71.141 | 447 | 104 | 4 | 1 | 429 | 1 | 440 | 0.0 | 611 |
| Msa0421330 | MtrunA17_Chr4g0063771 | 61.508 | 252 | 96 | 1 | 177 | 427 | 46 | 297 | 1.15e-109 | 325 |
| Msa0421330 | MtrunA17_Chr4g0033831 | 26.957 | 345 | 183 | 9 | 88 | 419 | 141 | 429 | 8.39e-26 | 108 |
| Msa0421330 | MtrunA17_Chr2g0329691 | 25.867 | 375 | 206 | 10 | 58 | 416 | 101 | 419 | 9.98e-25 | 105 |
| Msa0421330 | MtrunA17_Chr4g0064141 | 26.543 | 324 | 170 | 11 | 91 | 409 | 351 | 611 | 4.20e-22 | 99.0 |
| Msa0421330 | MtrunA17_Chr1g0183581 | 27.437 | 277 | 163 | 9 | 98 | 371 | 68 | 309 | 1.13e-21 | 96.7 |
| Msa0421330 | MtrunA17_Chr4g0041821 | 25.606 | 289 | 182 | 8 | 96 | 371 | 54 | 322 | 5.99e-18 | 85.5 |
| Msa0421330 | MtrunA17_Chr2g0329651 | 27.273 | 165 | 97 | 5 | 209 | 371 | 372 | 515 | 5.70e-13 | 70.9 |
| Msa0421330 | MtrunA17_Chr6g0456341 | 24.803 | 254 | 164 | 9 | 183 | 429 | 98 | 331 | 4.75e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421330 | AT4G13730.1 | 68.106 | 417 | 109 | 4 | 33 | 429 | 36 | 448 | 0.0 | 594 |
| Msa0421330 | AT1G04830.1 | 62.528 | 451 | 138 | 4 | 1 | 428 | 1 | 443 | 0.0 | 581 |
| Msa0421330 | AT4G13730.3 | 66.827 | 416 | 103 | 5 | 33 | 428 | 36 | 436 | 0.0 | 574 |
| Msa0421330 | AT1G04830.2 | 61.991 | 442 | 137 | 4 | 1 | 419 | 1 | 434 | 0.0 | 566 |
| Msa0421330 | AT4G13730.2 | 65.668 | 367 | 102 | 4 | 33 | 379 | 36 | 398 | 3.06e-178 | 504 |
| Msa0421330 | AT1G04830.3 | 55.432 | 451 | 127 | 5 | 1 | 428 | 1 | 400 | 7.83e-171 | 485 |
| Msa0421330 | AT4G28550.3 | 28.956 | 297 | 181 | 9 | 93 | 386 | 57 | 326 | 5.02e-25 | 105 |
| Msa0421330 | AT2G30710.1 | 25.187 | 401 | 226 | 11 | 35 | 418 | 70 | 413 | 1.43e-24 | 105 |
| Msa0421330 | AT4G28550.2 | 28.826 | 281 | 170 | 9 | 93 | 370 | 57 | 310 | 1.62e-23 | 100 |
| Msa0421330 | AT4G28550.1 | 29.329 | 283 | 168 | 10 | 93 | 371 | 57 | 311 | 3.05e-23 | 101 |
| Msa0421330 | AT2G20440.3 | 26.207 | 290 | 172 | 9 | 93 | 373 | 57 | 313 | 4.93e-23 | 100 |
| Msa0421330 | AT2G20440.1 | 26.389 | 288 | 170 | 9 | 93 | 371 | 57 | 311 | 9.08e-23 | 100 |
| Msa0421330 | AT2G20440.2 | 26.389 | 288 | 170 | 9 | 93 | 371 | 57 | 311 | 9.08e-23 | 100 |
| Msa0421330 | AT5G52580.1 | 24.000 | 325 | 177 | 13 | 91 | 409 | 359 | 619 | 1.91e-17 | 85.1 |
| Msa0421330 | AT5G52580.2 | 24.000 | 325 | 177 | 13 | 91 | 409 | 376 | 636 | 1.96e-17 | 85.1 |
| Msa0421330 | AT5G52580.3 | 24.000 | 325 | 177 | 13 | 91 | 409 | 365 | 625 | 1.97e-17 | 85.1 |
| Msa0421330 | AT2G20440.4 | 31.288 | 163 | 94 | 4 | 209 | 371 | 51 | 195 | 4.59e-17 | 82.0 |
| Msa0421330 | AT4G27100.2 | 26.733 | 303 | 169 | 13 | 96 | 376 | 54 | 325 | 3.51e-14 | 74.3 |
| Msa0421330 | AT4G27100.1 | 26.733 | 303 | 169 | 13 | 96 | 376 | 54 | 325 | 3.71e-14 | 74.3 |
| Msa0421330 | AT3G02460.1 | 25.397 | 252 | 165 | 8 | 183 | 429 | 99 | 332 | 1.20e-12 | 69.3 |
| Msa0421330 | AT3G02460.3 | 25.397 | 252 | 165 | 8 | 183 | 429 | 99 | 332 | 2.69e-12 | 68.2 |
| Msa0421330 | AT3G02460.5 | 26.667 | 195 | 125 | 6 | 183 | 374 | 99 | 278 | 8.75e-11 | 63.2 |
Find 137 sgRNAs with CRISPR-Local
Find 403 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACCTAAATGCATAAAAT+TGG | 0.183697 | 3_2:-70223053 | None:intergenic |
| TTGCTGACAGCCTTCGTATT+TGG | 0.221687 | 3_2:+70223106 | Msa0421330:CDS |
| GAGATTCAATTTGTTGAAAA+AGG | 0.255576 | 3_2:-70219653 | None:intergenic |
| CTTAGAATTTGTGTTGGAAT+TGG | 0.281833 | 3_2:+70219465 | Msa0421330:five_prime_UTR |
| AGTAATTTACAAACATAAAA+TGG | 0.287483 | 3_2:-70224848 | None:intergenic |
| ACACGTTTCTTCGCCATTAT+TGG | 0.289125 | 3_2:-70219720 | None:intergenic |
| TGCTGACAGCCTTCGTATTT+GGG | 0.295459 | 3_2:+70223107 | Msa0421330:CDS |
| TTAGCAGCAAAGCAACTTCT+AGG | 0.304211 | 3_2:+70219563 | Msa0421330:five_prime_UTR |
| AAAAGAAATATGGAGAAAAT+AGG | 0.314112 | 3_2:+70219436 | Msa0421330:five_prime_UTR |
| CCACAGAAGAAGTGCATATC+TGG | 0.316824 | 3_2:-70221676 | None:intergenic |
| TTGGAATTCATTCAAGTTAG+AGG | 0.328432 | 3_2:+70219484 | Msa0421330:five_prime_UTR |
| CCACCTAAATGCATAAAATT+GGG | 0.333447 | 3_2:-70223052 | None:intergenic |
| TTATTGGTTTACGATTATCT+AGG | 0.340958 | 3_2:-70219704 | None:intergenic |
| AGATAATCGTAAACCAATAA+TGG | 0.349340 | 3_2:+70219707 | Msa0421330:exon |
| CAACTTGACAATAGTATTGT+TGG | 0.351390 | 3_2:+70222318 | Msa0421330:CDS |
| TCAATTAGCAAAATCTAATC+AGG | 0.352915 | 3_2:+70221705 | Msa0421330:CDS |
| CTGGTTTACGTTCTACTATC+TGG | 0.362401 | 3_2:+70220149 | Msa0421330:CDS |
| TTACTAATTGATAGTTATCT+AGG | 0.362499 | 3_2:+70220068 | Msa0421330:intron |
| GTCAATCTGCTCTATGATAT+CGG | 0.394833 | 3_2:-70221632 | None:intergenic |
| AAGGTACCTCAGCTAACAAT+TGG | 0.404490 | 3_2:-70219971 | None:intergenic |
| GAACGTAAACCAGGAGAATC+AGG | 0.410846 | 3_2:-70220139 | None:intergenic |
| CTAACAATTGGGACTGGGAC+TGG | 0.421705 | 3_2:-70219959 | None:intergenic |
| GTTCGTAGGCGCCTCCTGGC+TGG | 0.422077 | 3_2:+70224672 | Msa0421330:CDS |
| GCGGAGGAGGAAGAAGAAGA+GGG | 0.422496 | 3_2:-70219894 | None:intergenic |
| CATAGGACTGTTGAGCCAAT+CGG | 0.442077 | 3_2:-70219745 | None:intergenic |
| TCTCGTTCGTAGGCGCCTCC+TGG | 0.442330 | 3_2:+70224668 | Msa0421330:CDS |
| GTAAATTACTCTGTAAATGT+TGG | 0.443650 | 3_2:+70224861 | Msa0421330:three_prime_UTR |
| CCTTGAACGTATCTAATACC+TGG | 0.446527 | 3_2:-70221861 | None:intergenic |
| TCAAAAGGACAATAGATTGA+TGG | 0.452627 | 3_2:+70225028 | Msa0421330:three_prime_UTR |
| GTAATGGCATTGTGATTTGA+GGG | 0.463198 | 3_2:-70219861 | None:intergenic |
| AAATGGAAATGCTACGTTGA+AGG | 0.464886 | 3_2:-70224831 | None:intergenic |
| AAATGACTAATGTTTGTAGA+AGG | 0.466590 | 3_2:-70224732 | None:intergenic |
| ATTTGTACCTGTGGACCATC+GGG | 0.472986 | 3_2:-70223147 | None:intergenic |
| GAATGTGTCGGCTTCAGAAA+AGG | 0.473240 | 3_2:-70222247 | None:intergenic |
| TACGTGTATAGTCAGTCTAA+TGG | 0.476722 | 3_2:+70224775 | Msa0421330:exon |
| TGCTTTGCTGCTAATTGAGT+GGG | 0.479781 | 3_2:-70219554 | None:intergenic |
| GGGGAACATCCTTTGAGTCT+TGG | 0.480329 | 3_2:+70220871 | Msa0421330:CDS |
| AGTAATGGCATTGTGATTTG+AGG | 0.483614 | 3_2:-70219862 | None:intergenic |
| GGACTGGGCCAGACCGGAGA+TGG | 0.487797 | 3_2:-70219943 | None:intergenic |
| GGAGGAAGTAGAAGCGGAGG+AGG | 0.488176 | 3_2:-70219907 | None:intergenic |
| AGCGGAGGAGGAAGAAGAAG+AGG | 0.489577 | 3_2:-70219895 | None:intergenic |
| TATTGGTTTACGATTATCTA+GGG | 0.491189 | 3_2:-70219703 | None:intergenic |
| GACCATCGGGATCACTTACA+AGG | 0.494906 | 3_2:-70223134 | None:intergenic |
| GGAGGAGGAAGAAGAAGAGG+GGG | 0.496753 | 3_2:-70219892 | None:intergenic |
| TTCCACCCGATCGTGCCCTC+TGG | 0.504111 | 3_2:+70220588 | Msa0421330:CDS |
| GGACTGGGACTGGGCCAGAC+CGG | 0.505741 | 3_2:-70219949 | None:intergenic |
| TTGTTGTAATTTGTAAGCCT+TGG | 0.507436 | 3_2:+70224943 | Msa0421330:three_prime_UTR |
| TGATACGTCCATCTCCGGTC+TGG | 0.510514 | 3_2:+70219935 | Msa0421330:CDS |
| AGAGGACCAGAGGGCACGAT+CGG | 0.511903 | 3_2:-70220594 | None:intergenic |
| CCAGGTATTAGATACGTTCA+AGG | 0.513591 | 3_2:+70221861 | Msa0421330:CDS |
| TGTTGTGGTTGCATTTGCAC+AGG | 0.514625 | 3_2:+70219516 | Msa0421330:five_prime_UTR |
| CACCTAAATGCATAAAATTG+GGG | 0.516855 | 3_2:-70223051 | None:intergenic |
| GAGGACCAGAGGGCACGATC+GGG | 0.517675 | 3_2:-70220593 | None:intergenic |
| GACCAGAGGGCACGATCGGG+TGG | 0.520756 | 3_2:-70220590 | None:intergenic |
| CCTCAGCTAACAATTGGGAC+TGG | 0.521487 | 3_2:-70219965 | None:intergenic |
| CGGCTCCTAGTATCCTCAAA+AGG | 0.521784 | 3_2:+70225013 | Msa0421330:three_prime_UTR |
| TTAGAACTTAGAATTTGTGT+TGG | 0.522263 | 3_2:+70219459 | Msa0421330:five_prime_UTR |
| TTGCTTTGCTGCTAATTGAG+TGG | 0.524144 | 3_2:-70219555 | None:intergenic |
| ATAGGACTGTTGAGCCAATC+GGG | 0.531109 | 3_2:-70219744 | None:intergenic |
| CGGAGGAGGAAGAAGAAGAG+GGG | 0.532719 | 3_2:-70219893 | None:intergenic |
| AATTTGTACCTGTGGACCAT+CGG | 0.532970 | 3_2:-70223148 | None:intergenic |
| CAAGGAATACCTGATTCTCC+TGG | 0.532971 | 3_2:+70220130 | Msa0421330:CDS |
| TCAAGGGATGAATGAAGTAT+TGG | 0.533142 | 3_2:+70221878 | Msa0421330:CDS |
| TAACAATTGGGACTGGGACT+GGG | 0.535698 | 3_2:-70219958 | None:intergenic |
| GTCTTGGCAAGACCAGCATA+TGG | 0.536179 | 3_2:+70220887 | Msa0421330:CDS |
| CTCAGCTAACAATTGGGACT+GGG | 0.536883 | 3_2:-70219964 | None:intergenic |
| CTGGTCTTGCCAAGACTCAA+AGG | 0.541012 | 3_2:-70220880 | None:intergenic |
| TTAGCATTGCACAGCATACC+CGG | 0.541460 | 3_2:-70224644 | None:intergenic |
| GATACTAGGAGCCGTGTAAG+TGG | 0.542145 | 3_2:-70225004 | None:intergenic |
| CTAGATCACAAATCACTCAC+GGG | 0.542734 | 3_2:+70220851 | Msa0421330:CDS |
| GCCGATGATACGTCCATCTC+CGG | 0.544643 | 3_2:+70219930 | Msa0421330:CDS |
| CGAAGAAACGTGTTCCCGAT+TGG | 0.545087 | 3_2:+70219730 | Msa0421330:CDS |
| TGTGTAGGAGACACTTCTCC+GGG | 0.545992 | 3_2:+70224626 | Msa0421330:intron |
| GAAGGAGGTTCCGATGGGTA+AGG | 0.546007 | 3_2:-70219807 | None:intergenic |
| TTGTGTAGGAGACACTTCTC+CGG | 0.547252 | 3_2:+70224625 | Msa0421330:intron |
| CCTCTTCTTTGCTAATTCAG+AGG | 0.547489 | 3_2:-70220612 | None:intergenic |
| TAGAAGTGAAATCACCAGCC+AGG | 0.547591 | 3_2:-70224686 | None:intergenic |
| GGTGGAGAAGGAGGTTCCGA+TGG | 0.551063 | 3_2:-70219813 | None:intergenic |
| TAGAGGAATTTGTGTTGTTG+TGG | 0.551743 | 3_2:+70219501 | Msa0421330:five_prime_UTR |
| CTCCGCCACTCCTTACCCAT+CGG | 0.557271 | 3_2:+70219797 | Msa0421330:CDS |
| CAGATAGTAGAACGTAAACC+AGG | 0.558115 | 3_2:-70220148 | None:intergenic |
| AGGTACCTCAGCTAACAATT+GGG | 0.559528 | 3_2:-70219970 | None:intergenic |
| TGCTAATTCAGAGGACCAGA+GGG | 0.560549 | 3_2:-70220603 | None:intergenic |
| TAATTGATAGTTATCTAGGA+AGG | 0.561350 | 3_2:+70220072 | Msa0421330:intron |
| AAGTGATCCCGATGGTCCAC+AGG | 0.563955 | 3_2:+70223140 | Msa0421330:CDS |
| GTATCAATTATCCACTTACA+CGG | 0.567630 | 3_2:+70224993 | Msa0421330:three_prime_UTR |
| ACCGGAGATGGACGTATCAT+CGG | 0.569384 | 3_2:-70219931 | None:intergenic |
| TTGAGAAGAATCGCATCTCA+AGG | 0.571903 | 3_2:+70220112 | Msa0421330:CDS |
| CTTGAACGTATCTAATACCT+GGG | 0.574822 | 3_2:-70221860 | None:intergenic |
| ACGGTGACAGACGGTGGAGA+AGG | 0.581153 | 3_2:-70219825 | None:intergenic |
| CAATGCTAATTCTCGTTCGT+AGG | 0.586992 | 3_2:+70224658 | Msa0421330:CDS |
| GGCGGAGGAAGTAGAAGCGG+AGG | 0.587826 | 3_2:-70219910 | None:intergenic |
| TGGAGTTTGAATTATTACTA+CGG | 0.588873 | 3_2:-70219384 | None:intergenic |
| AGAGCTATGGCGTCATCTTG+AGG | 0.589273 | 3_2:+70222392 | Msa0421330:CDS |
| GAGGAGGAAGAAGAAGAGGG+GGG | 0.593930 | 3_2:-70219891 | None:intergenic |
| GATTACTCTCCTCTTGACTC+AGG | 0.594268 | 3_2:+70223074 | Msa0421330:CDS |
| TTCCGATGGGTAAGGAGTGG+CGG | 0.595829 | 3_2:-70219799 | None:intergenic |
| CATCAAGATCATAGTGACCA+AGG | 0.598084 | 3_2:-70224960 | None:intergenic |
| CACGTAACTTATTAGCAACA+TGG | 0.599481 | 3_2:-70224758 | None:intergenic |
| GATGGACGTATCATCGGCGG+AGG | 0.602656 | 3_2:-70219925 | None:intergenic |
| CCAGATATGCACTTCTTCTG+TGG | 0.602682 | 3_2:+70221676 | Msa0421330:CDS |
| AACAAAACAAAAGAATGTGT+CGG | 0.603828 | 3_2:-70222259 | None:intergenic |
| GGTAAGGAGTGGCGGAGAAG+CGG | 0.606722 | 3_2:-70219791 | None:intergenic |
| TCTAGATCACAAATCACTCA+CGG | 0.608684 | 3_2:+70220850 | Msa0421330:CDS |
| AAGAACATGATGAAGAGCTA+TGG | 0.611233 | 3_2:+70222379 | Msa0421330:CDS |
| ACGATGTCAAATGTGAGACA+AGG | 0.611376 | 3_2:+70220818 | Msa0421330:CDS |
| GATGTGTACGCTTTACATCA+CGG | 0.611890 | 3_2:-70221654 | None:intergenic |
| TTGCTAATTCAGAGGACCAG+AGG | 0.613667 | 3_2:-70220604 | None:intergenic |
| CGATGTCAAATGTGAGACAA+GGG | 0.615721 | 3_2:+70220819 | Msa0421330:CDS |
| AATCGAATTCCTGAGTCAAG+AGG | 0.617372 | 3_2:-70223083 | None:intergenic |
| GATATATAGTGTATAGACAG+TGG | 0.617658 | 3_2:-70219404 | None:intergenic |
| TTTACGTTCTACTATCTGGA+AGG | 0.623739 | 3_2:+70220153 | Msa0421330:CDS |
| GTGACAGACGGTGGAGAAGG+AGG | 0.625461 | 3_2:-70219822 | None:intergenic |
| ATCGGCGGAGGAAGTAGAAG+CGG | 0.628290 | 3_2:-70219913 | None:intergenic |
| TGAGTGGGCCACTGTACACA+TGG | 0.630303 | 3_2:-70219539 | None:intergenic |
| ACCTAAATGCATAAAATTGG+GGG | 0.633746 | 3_2:-70223050 | None:intergenic |
| GTGGAGAAGGAGGTTCCGAT+GGG | 0.634939 | 3_2:-70219812 | None:intergenic |
| CCAGTCCCAATTGTTAGCTG+AGG | 0.637096 | 3_2:+70219965 | Msa0421330:CDS |
| CCTCTGAATTAGCAAAGAAG+AGG | 0.642412 | 3_2:+70220612 | Msa0421330:CDS |
| TCTTCAACGACGGTGACAGA+CGG | 0.643240 | 3_2:-70219834 | None:intergenic |
| TGAGGGAGGATCTTCAACGA+CGG | 0.646502 | 3_2:-70219844 | None:intergenic |
| ATTGGCTCAACAGTCCTATG+TGG | 0.650294 | 3_2:+70219748 | Msa0421330:CDS |
| CAGGTATTAGATACGTTCAA+GGG | 0.657243 | 3_2:+70221862 | Msa0421330:CDS |
| TGCACAGGCCATGTGTACAG+TGG | 0.665951 | 3_2:+70219531 | Msa0421330:five_prime_UTR |
| ATGGCATTGTGATTTGAGGG+AGG | 0.670489 | 3_2:-70219858 | None:intergenic |
| AGGTTCCGATGGGTAAGGAG+TGG | 0.675122 | 3_2:-70219802 | None:intergenic |
| TCAACGACGGTGACAGACGG+TGG | 0.678691 | 3_2:-70219831 | None:intergenic |
| CTAGTTAGTCAGAAATCACG+AGG | 0.679263 | 3_2:+70220764 | Msa0421330:intron |
| GATGTCAAATGTGAGACAAG+GGG | 0.689389 | 3_2:+70220820 | Msa0421330:CDS |
| CAAGGGTGTCCCAAATACGA+AGG | 0.690582 | 3_2:-70223116 | None:intergenic |
| ACCCTTGTAAGTGATCCCGA+TGG | 0.711690 | 3_2:+70223132 | Msa0421330:CDS |
| AAGTGAAATCACCAGCCAGG+AGG | 0.717321 | 3_2:-70224683 | None:intergenic |
| TCGGTGGGAGAGGACCACAT+AGG | 0.720286 | 3_2:-70219762 | None:intergenic |
| ACCATCGGGATCACTTACAA+GGG | 0.727931 | 3_2:-70223133 | None:intergenic |
| GGAGATGGACGTATCATCGG+CGG | 0.729332 | 3_2:-70219928 | None:intergenic |
| GTTAGTCAGAAATCACGAGG+AGG | 0.733374 | 3_2:+70220767 | Msa0421330:intron |
| TAGATCACAAATCACTCACG+GGG | 0.741569 | 3_2:+70220852 | Msa0421330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTAATAAAAAGAAATA+TGG | + | chr3_2:70219426-70219445 | Msa0421330:five_prime_UTR | 10.0% |
| !! | AATTCAATTATTAATATGTT+TGG | + | chr3_2:70220203-70220222 | Msa0421330:intron | 10.0% |
| !!! | ACTTTAAAAAAAAAAAAACA+AGG | - | chr3_2:70221325-70221344 | None:intergenic | 10.0% |
| !! | ACATTTATATTTATTAAGAT+CGG | - | chr3_2:70222609-70222628 | None:intergenic | 10.0% |
| !! | CATTAAATAATTTATGTATT+TGG | + | chr3_2:70224101-70224120 | Msa0421330:intron | 10.0% |
| !! | ATTCAAAAGAAAAAATGAAA+AGG | - | chr3_2:70220186-70220205 | None:intergenic | 15.0% |
| !!! | ATTATTTTCATTAGCTATTT+TGG | + | chr3_2:70220308-70220327 | Msa0421330:intron | 15.0% |
| !!! | ATATAAATTAGTCTGAATAA+CGG | - | chr3_2:70220701-70220720 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAACAAGGAA+CGG | - | chr3_2:70221320-70221339 | None:intergenic | 15.0% |
| !!! | TTAATTTTAATCGTTAACAA+AGG | + | chr3_2:70221493-70221512 | Msa0421330:intron | 15.0% |
| !!! | TTGATTTGATTTTCTTTTTT+TGG | + | chr3_2:70221784-70221803 | Msa0421330:intron | 15.0% |
| !!! | TGATTTGATTTTCTTTTTTT+GGG | + | chr3_2:70221785-70221804 | Msa0421330:intron | 15.0% |
| !!! | CTCTTTTCAAATTATTAAAA+TGG | - | chr3_2:70222457-70222476 | None:intergenic | 15.0% |
| !! | AAACATTATAAAGTAAAGTA+GGG | - | chr3_2:70224284-70224303 | None:intergenic | 15.0% |
| !! | TAAACATTATAAAGTAAAGT+AGG | - | chr3_2:70224285-70224304 | None:intergenic | 15.0% |
| !!! | TTTTTGTAGAACTAAATTAA+AGG | + | chr3_2:70224398-70224417 | Msa0421330:intron | 15.0% |
| !! | ATAAAAATGAATCTATTGTA+GGG | - | chr3_2:70224508-70224527 | None:intergenic | 15.0% |
| !! | AGTAATTTACAAACATAAAA+TGG | - | chr3_2:70224851-70224870 | None:intergenic | 15.0% |
| !!! | TATTTTGTAATACTATTCAA+AGG | + | chr3_2:70225069-70225088 | Msa0421330:three_prime_UTR | 15.0% |
| !! | AAAAGAAATATGGAGAAAAT+AGG | + | chr3_2:70219436-70219455 | Msa0421330:five_prime_UTR | 20.0% |
| !!! | TTACTAATTGATAGTTATCT+AGG | + | chr3_2:70220068-70220087 | Msa0421330:intron | 20.0% |
| !! | AAAGAAAAAATGAAAAGGTA+GGG | - | chr3_2:70220181-70220200 | None:intergenic | 20.0% |
| !! | AAAAGAAAAAATGAAAAGGT+AGG | - | chr3_2:70220182-70220201 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAACAAGGAAC+GGG | - | chr3_2:70221319-70221338 | None:intergenic | 20.0% |
| !! | GAAAATCAAATCAAAAGATA+AGG | - | chr3_2:70221778-70221797 | None:intergenic | 20.0% |
| !!! | GATTTGATTTTCTTTTTTTG+GGG | + | chr3_2:70221786-70221805 | Msa0421330:intron | 20.0% |
| !!! | ATTTGATTTTCTTTTTTTGG+GGG | + | chr3_2:70221787-70221806 | Msa0421330:intron | 20.0% |
| !! | TCAAACTTAAAGAGAAAAAA+GGG | - | chr3_2:70221982-70222001 | None:intergenic | 20.0% |
| !! | TTCAAACTTAAAGAGAAAAA+AGG | - | chr3_2:70221983-70222002 | None:intergenic | 20.0% |
| !!! | TTTAAAATTGTGTCTTACTT+TGG | - | chr3_2:70222424-70222443 | None:intergenic | 20.0% |
| !! | CACAAATTTAACAAAACATA+GGG | - | chr3_2:70222573-70222592 | None:intergenic | 20.0% |
| !! | ACACAAATTTAACAAAACAT+AGG | - | chr3_2:70222574-70222593 | None:intergenic | 20.0% |
| !! | TTGTTAATAATAACTATCTG+TGG | - | chr3_2:70222690-70222709 | None:intergenic | 20.0% |
| !!! | TTCTTCTTGTTCTTTTTTTT+TGG | + | chr3_2:70222787-70222806 | Msa0421330:intron | 20.0% |
| !!! | TCTTCTTGTTCTTTTTTTTT+GGG | + | chr3_2:70222788-70222807 | Msa0421330:intron | 20.0% |
| !! | TTAGATATTTCTTGAACAAA+TGG | + | chr3_2:70222811-70222830 | Msa0421330:intron | 20.0% |
| !! | TAGATATTTCTTGAACAAAT+GGG | + | chr3_2:70222812-70222831 | Msa0421330:intron | 20.0% |
| !!! | GAGGAAAAAAAGATTTTATT+GGG | - | chr3_2:70223606-70223625 | None:intergenic | 20.0% |
| !!! | AGAGGAAAAAAAGATTTTAT+TGG | - | chr3_2:70223607-70223626 | None:intergenic | 20.0% |
| !!! | ACAAAAGGAAATGATTTTTT+CGG | + | chr3_2:70223988-70224007 | Msa0421330:intron | 20.0% |
| !! | GATAAAAATGAATCTATTGT+AGG | - | chr3_2:70224509-70224528 | None:intergenic | 20.0% |
| !!! | TTTACTTGTAATTCTTTTAG+TGG | + | chr3_2:70224571-70224590 | Msa0421330:intron | 20.0% |
| ! | TGGAGTTTGAATTATTACTA+CGG | - | chr3_2:70219387-70219406 | None:intergenic | 25.0% |
| ! | TTAGAACTTAGAATTTGTGT+TGG | + | chr3_2:70219459-70219478 | Msa0421330:five_prime_UTR | 25.0% |
| !!! | TAGATTTTAGAAACCAACTA+TGG | - | chr3_2:70219610-70219629 | None:intergenic | 25.0% |
| !!! | GAGATTCAATTTGTTGAAAA+AGG | - | chr3_2:70219656-70219675 | None:intergenic | 25.0% |
| !!! | TATTGGTTTACGATTATCTA+GGG | - | chr3_2:70219706-70219725 | None:intergenic | 25.0% |
| !!! | TTATTGGTTTACGATTATCT+AGG | - | chr3_2:70219707-70219726 | None:intergenic | 25.0% |
| ! | AGATAATCGTAAACCAATAA+TGG | + | chr3_2:70219707-70219726 | Msa0421330:exon | 25.0% |
| !! | TAATTGATAGTTATCTAGGA+AGG | + | chr3_2:70220072-70220091 | Msa0421330:intron | 25.0% |
| ! | CATAGTGTTAATGCTATAAA+TGG | - | chr3_2:70220246-70220265 | None:intergenic | 25.0% |
| ! | TCACAGTTATTTATCCAAAT+AGG | + | chr3_2:70220492-70220511 | Msa0421330:intron | 25.0% |
| !!! | CATACATTGTTTTTGAGTTA+AGG | - | chr3_2:70220518-70220537 | None:intergenic | 25.0% |
| !! | TAACTTTTGCAGCTTTTATT+AGG | + | chr3_2:70220560-70220579 | Msa0421330:intron | 25.0% |
| !! | AACTTTTGCAGCTTTTATTA+GGG | + | chr3_2:70220561-70220580 | Msa0421330:intron | 25.0% |
| ! | TTAAACACATTCAAGCAAAA+GGG | - | chr3_2:70220982-70221001 | None:intergenic | 25.0% |
| ! | ATTAAACACATTCAAGCAAA+AGG | - | chr3_2:70220983-70221002 | None:intergenic | 25.0% |
| ! | CAGTAATTATGATAAAGCAA+TGG | - | chr3_2:70221023-70221042 | None:intergenic | 25.0% |
| ! | TCAATTAGCAAAATCTAATC+AGG | + | chr3_2:70221705-70221724 | Msa0421330:CDS | 25.0% |
| !! | TTTTTGAACACGTAGAATAA+AGG | - | chr3_2:70221906-70221925 | None:intergenic | 25.0% |
| ! | ATTTATTGTCCTAATTCTCT+TGG | - | chr3_2:70222022-70222041 | None:intergenic | 25.0% |
| !! | GGAAAGCTGAATTTTAAATT+TGG | - | chr3_2:70222049-70222068 | None:intergenic | 25.0% |
| !!! | GGACTTTTTGTTTACAAAAA+AGG | + | chr3_2:70222130-70222149 | Msa0421330:intron | 25.0% |
| ! | AACAAAACAAAAGAATGTGT+CGG | - | chr3_2:70222262-70222281 | None:intergenic | 25.0% |
| ! | GTTGTTGACAAAAATTATCT+CGG | - | chr3_2:70222302-70222321 | None:intergenic | 25.0% |
| !!! | TTGAAAAGAGAAGCATTTAA+AGG | + | chr3_2:70222467-70222486 | Msa0421330:intron | 25.0% |
| !!! | TGAAAAGAGAAGCATTTAAA+GGG | + | chr3_2:70222468-70222487 | Msa0421330:intron | 25.0% |
| ! | AGAAGATATACAAACAGAAA+CGG | - | chr3_2:70222869-70222888 | None:intergenic | 25.0% |
| ! | TAATACAATACAAGGTAGAA+AGG | - | chr3_2:70223178-70223197 | None:intergenic | 25.0% |
| ! | TTTCTACCTTGTATTGTATT+AGG | + | chr3_2:70223177-70223196 | Msa0421330:intron | 25.0% |
| ! | CTTAAACCTAATACAATACA+AGG | - | chr3_2:70223186-70223205 | None:intergenic | 25.0% |
| ! | CTTGTATTGTATTAGGTTTA+AGG | + | chr3_2:70223184-70223203 | Msa0421330:intron | 25.0% |
| ! | TAGATGATCTTAGAATTAGT+TGG | + | chr3_2:70223266-70223285 | Msa0421330:intron | 25.0% |
| !!! | GTTGTTAAGTTACTTTTAGA+TGG | + | chr3_2:70223310-70223329 | Msa0421330:intron | 25.0% |
| ! | CTGTACTTGTATATTAGTAA+AGG | + | chr3_2:70223380-70223399 | Msa0421330:intron | 25.0% |
| ! | TTGTATATTAGTAAAGGACA+AGG | + | chr3_2:70223386-70223405 | Msa0421330:intron | 25.0% |
| !!! | CACAACATTTTTTGCTTATT+CGG | + | chr3_2:70223688-70223707 | Msa0421330:intron | 25.0% |
| !! | AAAATCATTTCCTTTTGTTG+CGG | - | chr3_2:70223986-70224005 | None:intergenic | 25.0% |
| ! | ATTAACTGTCTCTTGTAAAT+AGG | - | chr3_2:70224071-70224090 | None:intergenic | 25.0% |
| !! | TACAATTTTATTGCTTCACA+CGG | + | chr3_2:70224204-70224223 | Msa0421330:intron | 25.0% |
| !! | CAACAATTCAGAATTTTATC+CGG | - | chr3_2:70224236-70224255 | None:intergenic | 25.0% |
| ! | TAATTCTTCAAGGGATAAAT+AGG | - | chr3_2:70224309-70224328 | None:intergenic | 25.0% |
| ! | TTATATACCCTGAATGTTAT+AGG | + | chr3_2:70224326-70224345 | Msa0421330:intron | 25.0% |
| !! | AAAAAAGAGTTGATTAGTAG+TGG | + | chr3_2:70224358-70224377 | Msa0421330:intron | 25.0% |
| ! | TTTAGTGGAAATAGAAAAAC+TGG | + | chr3_2:70224586-70224605 | Msa0421330:intron | 25.0% |
| ! | AAATGACTAATGTTTGTAGA+AGG | - | chr3_2:70224735-70224754 | None:intergenic | 25.0% |
| ! | GTAAATTACTCTGTAAATGT+TGG | + | chr3_2:70224861-70224880 | Msa0421330:three_prime_UTR | 25.0% |
| GATATATAGTGTATAGACAG+TGG | - | chr3_2:70219407-70219426 | None:intergenic | 30.0% | |
| CTTAGAATTTGTGTTGGAAT+TGG | + | chr3_2:70219465-70219484 | Msa0421330:five_prime_UTR | 30.0% | |
| ! | TTGGAATTCATTCAAGTTAG+AGG | + | chr3_2:70219484-70219503 | Msa0421330:five_prime_UTR | 30.0% |
| TATGGTCGAAAAATGAAAAG+GGG | - | chr3_2:70219592-70219611 | None:intergenic | 30.0% | |
| CTATGGTCGAAAAATGAAAA+GGG | - | chr3_2:70219593-70219612 | None:intergenic | 30.0% | |
| ACTATGGTCGAAAAATGAAA+AGG | - | chr3_2:70219594-70219613 | None:intergenic | 30.0% | |
| !! | TTTCATTTTTCGACCATAGT+TGG | + | chr3_2:70219594-70219613 | Msa0421330:five_prime_UTR | 30.0% |
| CATTTAGATTTGAGAGTGAA+AGG | - | chr3_2:70219993-70220012 | None:intergenic | 30.0% | |
| ACACCAAAAAAAGACTGTTT+GGG | - | chr3_2:70220412-70220431 | None:intergenic | 30.0% | |
| AACACCAAAAAAAGACTGTT+TGG | - | chr3_2:70220413-70220432 | None:intergenic | 30.0% | |
| !!! | TTTTTGAGTTAAGGCCTATT+TGG | - | chr3_2:70220509-70220528 | None:intergenic | 30.0% |
| AAATCATGACCTAGTAGTTA+CGG | - | chr3_2:70221380-70221399 | None:intergenic | 30.0% | |
| TTTGTTTGCACATTAACAGT+AGG | + | chr3_2:70221402-70221421 | Msa0421330:intron | 30.0% | |
| TAAGTTTGCATGAGTTTCAA+AGG | - | chr3_2:70221745-70221764 | None:intergenic | 30.0% | |
| CAAATCAAAAGATAAGGCTT+TGG | - | chr3_2:70221772-70221791 | None:intergenic | 30.0% | |
| TTAAAGAGAAAAAAGGGTGA+GGG | - | chr3_2:70221976-70221995 | None:intergenic | 30.0% | |
| TATTGCTTTCCAAGAGAATT+AGG | + | chr3_2:70222010-70222029 | Msa0421330:intron | 30.0% | |
| GAAATGATTAATATGTCCAC+CGG | + | chr3_2:70222098-70222117 | Msa0421330:intron | 30.0% | |
| !! | TGTTTTGTTGAACTATTGAG+TGG | + | chr3_2:70222273-70222292 | Msa0421330:CDS | 30.0% |
| CAACTTGACAATAGTATTGT+TGG | + | chr3_2:70222318-70222337 | Msa0421330:CDS | 30.0% | |
| !! | ACTAGAAAGTTTGTTTCTGT+TGG | + | chr3_2:70222636-70222655 | Msa0421330:intron | 30.0% |
| ATTAACAATAACTGTCCAGT+AGG | + | chr3_2:70222702-70222721 | Msa0421330:intron | 30.0% | |
| CTAGACAATTAATTGTGAGA+CGG | + | chr3_2:70222730-70222749 | Msa0421330:intron | 30.0% | |
| TAGACAATTAATTGTGAGAC+GGG | + | chr3_2:70222731-70222750 | Msa0421330:intron | 30.0% | |
| ATATTTCTTGAACAAATGGG+AGG | + | chr3_2:70222815-70222834 | Msa0421330:intron | 30.0% | |
| TATTTCTTGAACAAATGGGA+GGG | + | chr3_2:70222816-70222835 | Msa0421330:intron | 30.0% | |
| !! | CAGTTTTTCAATTCAAACTC+TGG | - | chr3_2:70222914-70222933 | None:intergenic | 30.0% |
| !!! | GTCTCTGATTAGTTTTACTT+CGG | - | chr3_2:70222950-70222969 | None:intergenic | 30.0% |
| !! | CACATCTGTTTCTAAATTTC+AGG | + | chr3_2:70223023-70223042 | Msa0421330:intron | 30.0% |
| ACCTAAATGCATAAAATTGG+GGG | - | chr3_2:70223053-70223072 | None:intergenic | 30.0% | |
| CACCTAAATGCATAAAATTG+GGG | - | chr3_2:70223054-70223073 | None:intergenic | 30.0% | |
| CCACCTAAATGCATAAAATT+GGG | - | chr3_2:70223055-70223074 | None:intergenic | 30.0% | |
| TCCACCTAAATGCATAAAAT+TGG | - | chr3_2:70223056-70223075 | None:intergenic | 30.0% | |
| AAGGAATAAATTTGTACCTG+TGG | - | chr3_2:70223159-70223178 | None:intergenic | 30.0% | |
| AGATGGAAAATATGAAGCAA+TGG | + | chr3_2:70223327-70223346 | Msa0421330:intron | 30.0% | |
| ! | AAAATATGAAGCAATGGACT+TGG | + | chr3_2:70223333-70223352 | Msa0421330:intron | 30.0% |
| !! | TTCGGTTTTGTGATTTCTAT+TGG | - | chr3_2:70223418-70223437 | None:intergenic | 30.0% |
| AATAGAAATCACAAAACCGA+AGG | + | chr3_2:70223417-70223436 | Msa0421330:intron | 30.0% | |
| !!! | TTGCTTTTTGTATGTTCCTT+CGG | - | chr3_2:70223436-70223455 | None:intergenic | 30.0% |
| CAAAAAGCAAACAGATCTTA+AGG | + | chr3_2:70223446-70223465 | Msa0421330:intron | 30.0% | |
| ACTGCTAATGTAAAAAACAC+AGG | - | chr3_2:70223888-70223907 | None:intergenic | 30.0% | |
| GTCAACTTTCTCTTGTAAAT+AGG | + | chr3_2:70224170-70224189 | Msa0421330:intron | 30.0% | |
| CAGGGTATATAATTCTTCAA+GGG | - | chr3_2:70224318-70224337 | None:intergenic | 30.0% | |
| TCAGGGTATATAATTCTTCA+AGG | - | chr3_2:70224319-70224338 | None:intergenic | 30.0% | |
| ATACGATCCTATAACATTCA+GGG | - | chr3_2:70224336-70224355 | None:intergenic | 30.0% | |
| AAATGAATCTATTGTAGGGA+AGG | - | chr3_2:70224504-70224523 | None:intergenic | 30.0% | |
| TCTCAAATTGTGTATTGAGA+AGG | + | chr3_2:70224527-70224546 | Msa0421330:intron | 30.0% | |
| ACTAACTCTTAGTATTGTGT+AGG | + | chr3_2:70224611-70224630 | Msa0421330:intron | 30.0% | |
| ACAAAATGCAAAAAAACAGC+TGG | - | chr3_2:70224806-70224825 | None:intergenic | 30.0% | |
| ! | TTGTTGTAATTTGTAAGCCT+TGG | + | chr3_2:70224943-70224962 | Msa0421330:three_prime_UTR | 30.0% |
| GTATCAATTATCCACTTACA+CGG | + | chr3_2:70224993-70225012 | Msa0421330:three_prime_UTR | 30.0% | |
| ! | ATCAATCTATTGTCCTTTTG+AGG | - | chr3_2:70225029-70225048 | None:intergenic | 30.0% |
| TCAAAAGGACAATAGATTGA+TGG | + | chr3_2:70225028-70225047 | Msa0421330:three_prime_UTR | 30.0% | |
| ! | TAGAGGAATTTGTGTTGTTG+TGG | + | chr3_2:70219501-70219520 | Msa0421330:five_prime_UTR | 35.0% |
| ATGGTCGAAAAATGAAAAGG+GGG | - | chr3_2:70219591-70219610 | None:intergenic | 35.0% | |
| GTAATGGCATTGTGATTTGA+GGG | - | chr3_2:70219864-70219883 | None:intergenic | 35.0% | |
| AGTAATGGCATTGTGATTTG+AGG | - | chr3_2:70219865-70219884 | None:intergenic | 35.0% | |
| TTTACGTTCTACTATCTGGA+AGG | + | chr3_2:70220153-70220172 | Msa0421330:CDS | 35.0% | |
| !! | TAGCTATTTTGGAGAGCTTA+TGG | + | chr3_2:70220319-70220338 | Msa0421330:intron | 35.0% |
| !! | CATGTCGATAAGTTGTTTTC+AGG | - | chr3_2:70220351-70220370 | None:intergenic | 35.0% |
| !!! | TCTCCCAAACAGTCTTTTTT+TGG | + | chr3_2:70220406-70220425 | Msa0421330:intron | 35.0% |
| ! | TTTGGAACTCCGGATTATTA+GGG | - | chr3_2:70220460-70220479 | None:intergenic | 35.0% |
| ! | ATTTGGAACTCCGGATTATT+AGG | - | chr3_2:70220461-70220480 | None:intergenic | 35.0% |
| TGGATAAATAACTGTGAGAC+TGG | - | chr3_2:70220489-70220508 | None:intergenic | 35.0% | |
| CATCAATCCTGTAAGTTAGT+TGG | + | chr3_2:70220667-70220686 | Msa0421330:intron | 35.0% | |
| ATCCTGTAAGTTAGTTGGTT+TGG | + | chr3_2:70220672-70220691 | Msa0421330:intron | 35.0% | |
| AACCAAACCAACTAACTTAC+AGG | - | chr3_2:70220677-70220696 | None:intergenic | 35.0% | |
| AGCCACAAAAACATTCAGAT+GGG | - | chr3_2:70220746-70220765 | None:intergenic | 35.0% | |
| TAGCCACAAAAACATTCAGA+TGG | - | chr3_2:70220747-70220766 | None:intergenic | 35.0% | |
| TCTAGATCACAAATCACTCA+CGG | + | chr3_2:70220850-70220869 | Msa0421330:CDS | 35.0% | |
| ! | GAAAAACTGATTCCATATGC+TGG | - | chr3_2:70220902-70220921 | None:intergenic | 35.0% |
| ! | CATATGGAATCAGTTTTTCC+AGG | + | chr3_2:70220903-70220922 | Msa0421330:CDS | 35.0% |
| TTACTGTGTTATCTGTTGTG+AGG | + | chr3_2:70221037-70221056 | Msa0421330:intron | 35.0% | |
| !! | AGAAAAATGAAGTACCGAAC+AGG | - | chr3_2:70221130-70221149 | None:intergenic | 35.0% |
| AATCATGACCTAGTAGTTAC+GGG | - | chr3_2:70221379-70221398 | None:intergenic | 35.0% | |
| AATAACAGCTAGATCATCAG+CGG | - | chr3_2:70221467-70221486 | None:intergenic | 35.0% | |
| TCATATAATGTGCTGTACTC+TGG | + | chr3_2:70221556-70221575 | Msa0421330:intron | 35.0% | |
| CATATAATGTGCTGTACTCT+GGG | + | chr3_2:70221557-70221576 | Msa0421330:intron | 35.0% | |
| ATATAATGTGCTGTACTCTG+GGG | + | chr3_2:70221558-70221577 | Msa0421330:intron | 35.0% | |
| ! | TGTTACACTGTGTGTGTTTT+AGG | + | chr3_2:70221606-70221625 | Msa0421330:intron | 35.0% |
| GTCAATCTGCTCTATGATAT+CGG | - | chr3_2:70221635-70221654 | None:intergenic | 35.0% | |
| ATGAGTTTCAAAGGAACCAA+GGG | - | chr3_2:70221736-70221755 | None:intergenic | 35.0% | |
| ! | ATTTTTGCAAAGTTGAACCC+AGG | + | chr3_2:70221843-70221862 | Msa0421330:CDS | 35.0% |
| CTTGAACGTATCTAATACCT+GGG | - | chr3_2:70221863-70221882 | None:intergenic | 35.0% | |
| CAGGTATTAGATACGTTCAA+GGG | + | chr3_2:70221862-70221881 | Msa0421330:CDS | 35.0% | |
| TCAAGGGATGAATGAAGTAT+TGG | + | chr3_2:70221878-70221897 | Msa0421330:CDS | 35.0% | |
| CTTAAAGAGAAAAAAGGGTG+AGG | - | chr3_2:70221977-70221996 | None:intergenic | 35.0% | |
| ! | TCATTTTCTTGCGTGTACAT+GGG | - | chr3_2:70222070-70222089 | None:intergenic | 35.0% |
| ! | TTCATTTTCTTGCGTGTACA+TGG | - | chr3_2:70222071-70222090 | None:intergenic | 35.0% |
| TGTTGCCAATTATTATACGC+AGG | + | chr3_2:70222224-70222243 | Msa0421330:intron | 35.0% | |
| AAAGGCCTGCGTATAATAAT+TGG | - | chr3_2:70222232-70222251 | None:intergenic | 35.0% | |
| AAGAACATGATGAAGAGCTA+TGG | + | chr3_2:70222379-70222398 | Msa0421330:CDS | 35.0% | |
| AGTTGACGATGAACTCAATT+TGG | + | chr3_2:70222508-70222527 | Msa0421330:intron | 35.0% | |
| AGACAATTAATTGTGAGACG+GGG | + | chr3_2:70222732-70222751 | Msa0421330:intron | 35.0% | |
| AAACTCTGGTGTCTATTACT+AGG | - | chr3_2:70222900-70222919 | None:intergenic | 35.0% | |
| TTATGTTGCTGTGTAGTAGA+AGG | + | chr3_2:70222979-70222998 | Msa0421330:intron | 35.0% | |
| ! | ACCCCCAATTTTATGCATTT+AGG | + | chr3_2:70223049-70223068 | Msa0421330:CDS | 35.0% |
| ! | CCCAATTTTATGCATTTAGG+TGG | + | chr3_2:70223052-70223071 | Msa0421330:CDS | 35.0% |
| !! | GGTTTTGTGATTTCTATTGG+AGG | - | chr3_2:70223415-70223434 | None:intergenic | 35.0% |
| ! | GGGATACTTATCTGAGTTTT+TGG | - | chr3_2:70223586-70223605 | None:intergenic | 35.0% |
| ! | GGTAGTTGATTCATGAATGA+AGG | + | chr3_2:70223709-70223728 | Msa0421330:intron | 35.0% |
| TGAATGAAGGTGAAAGACTA+TGG | + | chr3_2:70223722-70223741 | Msa0421330:intron | 35.0% | |
| !!! | TTTTTTTGGAGGAGTTTGCT+AGG | - | chr3_2:70223961-70223980 | None:intergenic | 35.0% |
| !! | CTTTTGTTGCGGACTTTTTT+TGG | - | chr3_2:70223975-70223994 | None:intergenic | 35.0% |
| CAAAAAAAGTCCGCAACAAA+AGG | + | chr3_2:70223973-70223992 | Msa0421330:intron | 35.0% | |
| TTCTTTGCTGAAGGACAAAA+TGG | - | chr3_2:70224035-70224054 | None:intergenic | 35.0% | |
| CTTTCTCTTGTAAATAGGAC+CGG | + | chr3_2:70224175-70224194 | Msa0421330:intron | 35.0% | |
| CAATAAAATTGTACTCCCTC+CGG | - | chr3_2:70224197-70224216 | None:intergenic | 35.0% | |
| CATACGATCCTATAACATTC+AGG | - | chr3_2:70224337-70224356 | None:intergenic | 35.0% | |
| ATACACCCTTGCACAATTAA+GGG | - | chr3_2:70224439-70224458 | None:intergenic | 35.0% | |
| AATACACCCTTGCACAATTA+AGG | - | chr3_2:70224440-70224459 | None:intergenic | 35.0% | |
| AATCTATTGTAGGGAAGGAA+AGG | - | chr3_2:70224499-70224518 | None:intergenic | 35.0% | |
| CACGTAACTTATTAGCAACA+TGG | - | chr3_2:70224761-70224780 | None:intergenic | 35.0% | |
| TACGTGTATAGTCAGTCTAA+TGG | + | chr3_2:70224775-70224794 | Msa0421330:exon | 35.0% | |
| AAATGGAAATGCTACGTTGA+AGG | - | chr3_2:70224834-70224853 | None:intergenic | 35.0% | |
| !! | ATTGTCCTTTTGAGGATACT+AGG | - | chr3_2:70225021-70225040 | None:intergenic | 35.0% |
| TGCTTTGCTGCTAATTGAGT+GGG | - | chr3_2:70219557-70219576 | None:intergenic | 40.0% | |
| TTGCTTTGCTGCTAATTGAG+TGG | - | chr3_2:70219558-70219577 | None:intergenic | 40.0% | |
| TTAGCAGCAAAGCAACTTCT+AGG | + | chr3_2:70219563-70219582 | Msa0421330:five_prime_UTR | 40.0% | |
| ACACGTTTCTTCGCCATTAT+TGG | - | chr3_2:70219723-70219742 | None:intergenic | 40.0% | |
| AGGTACCTCAGCTAACAATT+GGG | - | chr3_2:70219973-70219992 | None:intergenic | 40.0% | |
| ! | AAGGTACCTCAGCTAACAAT+TGG | - | chr3_2:70219974-70219993 | None:intergenic | 40.0% |
| TTGAGAAGAATCGCATCTCA+AGG | + | chr3_2:70220112-70220131 | Msa0421330:CDS | 40.0% | |
| CAGATAGTAGAACGTAAACC+AGG | - | chr3_2:70220151-70220170 | None:intergenic | 40.0% | |
| CTGGTTTACGTTCTACTATC+TGG | + | chr3_2:70220149-70220168 | Msa0421330:CDS | 40.0% | |
| TTCCATAAGCTCGTTTCCAT+AGG | + | chr3_2:70220382-70220401 | Msa0421330:intron | 40.0% | |
| !!! | GTCTTTTTTTGGTGTTACCC+CGG | + | chr3_2:70220417-70220436 | Msa0421330:intron | 40.0% |
| CCTCTTCTTTGCTAATTCAG+AGG | - | chr3_2:70220615-70220634 | None:intergenic | 40.0% | |
| CCTCTGAATTAGCAAAGAAG+AGG | + | chr3_2:70220612-70220631 | Msa0421330:CDS | 40.0% | |
| !! | CTCCCATCTGAATGTTTTTG+TGG | + | chr3_2:70220741-70220760 | Msa0421330:intron | 40.0% |
| CTAGTTAGTCAGAAATCACG+AGG | + | chr3_2:70220764-70220783 | Msa0421330:intron | 40.0% | |
| ACGATGTCAAATGTGAGACA+AGG | + | chr3_2:70220818-70220837 | Msa0421330:CDS | 40.0% | |
| CGATGTCAAATGTGAGACAA+GGG | + | chr3_2:70220819-70220838 | Msa0421330:CDS | 40.0% | |
| GATGTCAAATGTGAGACAAG+GGG | + | chr3_2:70220820-70220839 | Msa0421330:CDS | 40.0% | |
| CTAGATCACAAATCACTCAC+GGG | + | chr3_2:70220851-70220870 | Msa0421330:CDS | 40.0% | |
| TAGATCACAAATCACTCACG+GGG | + | chr3_2:70220852-70220871 | Msa0421330:CDS | 40.0% | |
| AGTCTGCATAGACTATTACC+TGG | - | chr3_2:70220924-70220943 | None:intergenic | 40.0% | |
| !! | AATGAAGTACCGAACAGGTA+TGG | - | chr3_2:70221125-70221144 | None:intergenic | 40.0% |
| CACATTAACAGTAGGTCTTG+AGG | + | chr3_2:70221410-70221429 | Msa0421330:intron | 40.0% | |
| GCTGATGATCTAGCTGTTAT+TGG | + | chr3_2:70221466-70221485 | Msa0421330:intron | 40.0% | |
| GATGTGTACGCTTTACATCA+CGG | - | chr3_2:70221657-70221676 | None:intergenic | 40.0% | |
| ! | ATCTAATCAGGTTGTTCCCT+TGG | + | chr3_2:70221717-70221736 | Msa0421330:intron | 40.0% |
| CATGAGTTTCAAAGGAACCA+AGG | - | chr3_2:70221737-70221756 | None:intergenic | 40.0% | |
| !!! | CTTTTTTTGGGGGCATTTTC+AGG | + | chr3_2:70221797-70221816 | Msa0421330:intron | 40.0% |
| CCTTGAACGTATCTAATACC+TGG | - | chr3_2:70221864-70221883 | None:intergenic | 40.0% | |
| CCAGGTATTAGATACGTTCA+AGG | + | chr3_2:70221861-70221880 | Msa0421330:CDS | 40.0% | |
| CAAAAAGTCCGTCAACATTC+CGG | - | chr3_2:70222120-70222139 | None:intergenic | 40.0% | |
| AGTTCATCGTCAACTTTCTC+AGG | - | chr3_2:70222503-70222522 | None:intergenic | 40.0% | |
| GACGATGAACTCAATTTGGT+TGG | + | chr3_2:70222512-70222531 | Msa0421330:intron | 40.0% | |
| AGACGGGGTAGAAATGAATA+GGG | + | chr3_2:70222747-70222766 | Msa0421330:intron | 40.0% | |
| AATAGGGAGGAGAAGTTTGT+TGG | + | chr3_2:70222763-70222782 | Msa0421330:intron | 40.0% | |
| GAGATGAAGATTGCAGAGAA+CGG | - | chr3_2:70222847-70222866 | None:intergenic | 40.0% | |
| AATCGAATTCCTGAGTCAAG+AGG | - | chr3_2:70223086-70223105 | None:intergenic | 40.0% | |
| AATTTGTACCTGTGGACCAT+CGG | - | chr3_2:70223151-70223170 | None:intergenic | 40.0% | |
| ! | TGGACTTGGCTCTTATAAAG+TGG | + | chr3_2:70223347-70223366 | Msa0421330:intron | 40.0% |
| ! | GGACTTGGCTCTTATAAAGT+GGG | + | chr3_2:70223348-70223367 | Msa0421330:intron | 40.0% |
| ! | GACTTGGCTCTTATAAAGTG+GGG | + | chr3_2:70223349-70223368 | Msa0421330:intron | 40.0% |
| ! | ACTTGGCTCTTATAAAGTGG+GGG | + | chr3_2:70223350-70223369 | Msa0421330:intron | 40.0% |
| ! | TTTTTCCTCTTCGCTCTATG+AGG | + | chr3_2:70223617-70223636 | Msa0421330:intron | 40.0% |
| TTAATCCTCATAGAGCGAAG+AGG | - | chr3_2:70223625-70223644 | None:intergenic | 40.0% | |
| !! | AAAGCATTGACGATCAACGA+GGG | + | chr3_2:70223654-70223673 | Msa0421330:intron | 40.0% |
| TTGCTAGGAGCTATGAAACA+CGG | - | chr3_2:70223946-70223965 | None:intergenic | 40.0% | |
| !!! | TTGTTGCGGACTTTTTTTGG+AGG | - | chr3_2:70223972-70223991 | None:intergenic | 40.0% |
| CTGTCTCTTGTAAATAGGAC+CGG | - | chr3_2:70224066-70224085 | None:intergenic | 40.0% | |
| TGTTGCCCTTAATTGTGCAA+GGG | + | chr3_2:70224431-70224450 | Msa0421330:intron | 40.0% | |
| TTGTGTATTGAGAAGGAGCA+TGG | + | chr3_2:70224534-70224553 | Msa0421330:intron | 40.0% | |
| ! | TGTGTATTGAGAAGGAGCAT+GGG | + | chr3_2:70224535-70224554 | Msa0421330:intron | 40.0% |
| CAATGCTAATTCTCGTTCGT+AGG | + | chr3_2:70224658-70224677 | Msa0421330:CDS | 40.0% | |
| CATCAAGATCATAGTGACCA+AGG | - | chr3_2:70224963-70224982 | None:intergenic | 40.0% | |
| TGTTGTGGTTGCATTTGCAC+AGG | + | chr3_2:70219516-70219535 | Msa0421330:five_prime_UTR | 45.0% | |
| ATAGGACTGTTGAGCCAATC+GGG | - | chr3_2:70219747-70219766 | None:intergenic | 45.0% | |
| CATAGGACTGTTGAGCCAAT+CGG | - | chr3_2:70219748-70219767 | None:intergenic | 45.0% | |
| ! | ATTGGCTCAACAGTCCTATG+TGG | + | chr3_2:70219748-70219767 | Msa0421330:CDS | 45.0% |
| ATGGCATTGTGATTTGAGGG+AGG | - | chr3_2:70219861-70219880 | None:intergenic | 45.0% | |
| TAACAATTGGGACTGGGACT+GGG | - | chr3_2:70219961-70219980 | None:intergenic | 45.0% | |
| CTCAGCTAACAATTGGGACT+GGG | - | chr3_2:70219967-70219986 | None:intergenic | 45.0% | |
| CAAGGAATACCTGATTCTCC+TGG | + | chr3_2:70220130-70220149 | Msa0421330:CDS | 45.0% | |
| GAACGTAAACCAGGAGAATC+AGG | - | chr3_2:70220142-70220161 | None:intergenic | 45.0% | |
| AGCCTATGGAAACGAGCTTA+TGG | - | chr3_2:70220387-70220406 | None:intergenic | 45.0% | |
| ! | CTGGCACTTATTTGGAACTC+CGG | - | chr3_2:70220470-70220489 | None:intergenic | 45.0% |
| CTGTGAGACTGGCACTTATT+TGG | - | chr3_2:70220478-70220497 | None:intergenic | 45.0% | |
| TGCTAATTCAGAGGACCAGA+GGG | - | chr3_2:70220606-70220625 | None:intergenic | 45.0% | |
| TTGCTAATTCAGAGGACCAG+AGG | - | chr3_2:70220607-70220626 | None:intergenic | 45.0% | |
| GTTAGTCAGAAATCACGAGG+AGG | + | chr3_2:70220767-70220786 | Msa0421330:intron | 45.0% | |
| TGTGCTCTTCATGTCATGAC+TGG | + | chr3_2:70221091-70221110 | Msa0421330:intron | 45.0% | |
| TGACCTAGTAGTTACGGGTA+CGG | - | chr3_2:70221374-70221393 | None:intergenic | 45.0% | |
| ! | CCACAGAAGAAGTGCATATC+TGG | - | chr3_2:70221679-70221698 | None:intergenic | 45.0% |
| CCAGATATGCACTTCTTCTG+TGG | + | chr3_2:70221676-70221695 | Msa0421330:CDS | 45.0% | |
| !!! | TTTTTGGGGGCATTTTCAGG+AGG | + | chr3_2:70221800-70221819 | Msa0421330:intron | 45.0% |
| GTTCAAAAATGATCCCGACG+AGG | + | chr3_2:70221917-70221936 | Msa0421330:CDS | 45.0% | |
| ! | ACTCACTGCATTTTCCTCGT+CGG | - | chr3_2:70221934-70221953 | None:intergenic | 45.0% |
| TATGTCCACCGGAATGTTGA+CGG | + | chr3_2:70222109-70222128 | Msa0421330:intron | 45.0% | |
| !! | GAATGTGTCGGCTTCAGAAA+AGG | - | chr3_2:70222250-70222269 | None:intergenic | 45.0% |
| AAAACATAGGGCAGCTTCAC+AGG | - | chr3_2:70222561-70222580 | None:intergenic | 45.0% | |
| AATTGTCTAGTGCAGCCTAC+TGG | - | chr3_2:70222720-70222739 | None:intergenic | 45.0% | |
| GAGACGGGGTAGAAATGAAT+AGG | + | chr3_2:70222746-70222765 | Msa0421330:intron | 45.0% | |
| GATTACTCTCCTCTTGACTC+AGG | + | chr3_2:70223074-70223093 | Msa0421330:CDS | 45.0% | |
| TTGCTGACAGCCTTCGTATT+TGG | + | chr3_2:70223106-70223125 | Msa0421330:CDS | 45.0% | |
| TGCTGACAGCCTTCGTATTT+GGG | + | chr3_2:70223107-70223126 | Msa0421330:CDS | 45.0% | |
| ACCATCGGGATCACTTACAA+GGG | - | chr3_2:70223136-70223155 | None:intergenic | 45.0% | |
| ATTTGTACCTGTGGACCATC+GGG | - | chr3_2:70223150-70223169 | None:intergenic | 45.0% | |
| CCATTCTTCATGACCTAGGA+GGG | - | chr3_2:70223500-70223519 | None:intergenic | 45.0% | |
| TCCATTCTTCATGACCTAGG+AGG | - | chr3_2:70223501-70223520 | None:intergenic | 45.0% | |
| GTGTCCATTCTTCATGACCT+AGG | - | chr3_2:70223504-70223523 | None:intergenic | 45.0% | |
| CATGAAGAATGGACACCTGT+AGG | + | chr3_2:70223508-70223527 | Msa0421330:intron | 45.0% | |
| GAATGGACACCTGTAGGATT+AGG | + | chr3_2:70223514-70223533 | Msa0421330:intron | 45.0% | |
| !! | CAAAGCATTGACGATCAACG+AGG | + | chr3_2:70223653-70223672 | Msa0421330:intron | 45.0% |
| !! | AAGCATTGACGATCAACGAG+GGG | + | chr3_2:70223655-70223674 | Msa0421330:intron | 45.0% |
| CAGTGTTAACGTGTCTGTGT+CGG | + | chr3_2:70223904-70223923 | Msa0421330:intron | 45.0% | |
| TGAAACACGGACACAGACAT+GGG | - | chr3_2:70223933-70223952 | None:intergenic | 45.0% | |
| ATGAAACACGGACACAGACA+TGG | - | chr3_2:70223934-70223953 | None:intergenic | 45.0% | |
| !! | GAGGGAGTATTCTTTGCTGA+AGG | - | chr3_2:70224044-70224063 | None:intergenic | 45.0% |
| TCAGCAAAGAATACTCCCTC+CGG | + | chr3_2:70224044-70224063 | Msa0421330:intron | 45.0% | |
| CTCTTGTAAATAGGACCGGA+GGG | - | chr3_2:70224179-70224198 | None:intergenic | 45.0% | |
| TCTCTTGTAAATAGGACCGG+AGG | - | chr3_2:70224178-70224197 | None:intergenic | 45.0% | |
| TCTCTTGTAAATAGGACCGG+AGG | + | chr3_2:70224178-70224197 | Msa0421330:intron | 45.0% | |
| CTCTTGTAAATAGGACCGGA+GGG | + | chr3_2:70224179-70224198 | Msa0421330:intron | 45.0% | |
| ! | TTGCTTCACACGGCTTTTAC+CGG | + | chr3_2:70224214-70224233 | Msa0421330:intron | 45.0% |
| GTGTTGCCCTTAATTGTGCA+AGG | + | chr3_2:70224430-70224449 | Msa0421330:intron | 45.0% | |
| TTGTGTAGGAGACACTTCTC+CGG | + | chr3_2:70224625-70224644 | Msa0421330:intron | 45.0% | |
| TTAGCATTGCACAGCATACC+CGG | - | chr3_2:70224647-70224666 | None:intergenic | 45.0% | |
| TAGAAGTGAAATCACCAGCC+AGG | - | chr3_2:70224689-70224708 | None:intergenic | 45.0% | |
| !! | CATAATAAATAAATATATAT+TGG | + | chr3_2:70223859-70223878 | Msa0421330:intron | 5.0% |
| CGAAGAAACGTGTTCCCGAT+TGG | + | chr3_2:70219730-70219749 | Msa0421330:CDS | 50.0% | |
| !!! | GAGAAGCGGTTTTGTTCGGT+GGG | - | chr3_2:70219780-70219799 | None:intergenic | 50.0% |
| TCTTCAACGACGGTGACAGA+CGG | - | chr3_2:70219837-70219856 | None:intergenic | 50.0% | |
| TGAGGGAGGATCTTCAACGA+CGG | - | chr3_2:70219847-70219866 | None:intergenic | 50.0% | |
| AGAGGGGGGTGAAGTAGTAA+TGG | - | chr3_2:70219880-70219899 | None:intergenic | 50.0% | |
| ACCGGAGATGGACGTATCAT+CGG | - | chr3_2:70219934-70219953 | None:intergenic | 50.0% | |
| CTAACAATTGGGACTGGGAC+TGG | - | chr3_2:70219962-70219981 | None:intergenic | 50.0% | |
| CCTCAGCTAACAATTGGGAC+TGG | - | chr3_2:70219968-70219987 | None:intergenic | 50.0% | |
| CCAGTCCCAATTGTTAGCTG+AGG | + | chr3_2:70219965-70219984 | Msa0421330:CDS | 50.0% | |
| AGACTGTTTGGGAGAGCCTA+TGG | - | chr3_2:70220401-70220420 | None:intergenic | 50.0% | |
| !! | TTTGGTGTTACCCCGGTTAC+CGG | + | chr3_2:70220424-70220443 | Msa0421330:intron | 50.0% |
| GGAATGGGGCCCTAATAATC+CGG | + | chr3_2:70220448-70220467 | Msa0421330:intron | 50.0% | |
| GGGGAACATCCTTTGAGTCT+TGG | + | chr3_2:70220871-70220890 | Msa0421330:CDS | 50.0% | |
| !! | CTGGTCTTGCCAAGACTCAA+AGG | - | chr3_2:70220883-70220902 | None:intergenic | 50.0% |
| GTCTTGGCAAGACCAGCATA+TGG | + | chr3_2:70220887-70220906 | Msa0421330:CDS | 50.0% | |
| !! | AAAGTGCCGCATTTCGTACC+CGG | + | chr3_2:70221340-70221359 | Msa0421330:intron | 50.0% |
| GTACCGTACCCGTAACTACT+AGG | + | chr3_2:70221368-70221387 | Msa0421330:intron | 50.0% | |
| GGAGTGAAGAGCTATCGTGA+TGG | + | chr3_2:70221579-70221598 | Msa0421330:intron | 50.0% | |
| ! | CTCACTGCATTTTCCTCGTC+GGG | - | chr3_2:70221933-70221952 | None:intergenic | 50.0% |
| AAAGTCCGTCAACATTCCGG+TGG | - | chr3_2:70222117-70222136 | None:intergenic | 50.0% | |
| AGAGCTATGGCGTCATCTTG+AGG | + | chr3_2:70222392-70222411 | Msa0421330:CDS | 50.0% | |
| CGGGGTAGAAATGAATAGGG+AGG | + | chr3_2:70222750-70222769 | Msa0421330:intron | 50.0% | |
| !! | CAAGGGTGTCCCAAATACGA+AGG | - | chr3_2:70223119-70223138 | None:intergenic | 50.0% |
| ACCCTTGTAAGTGATCCCGA+TGG | + | chr3_2:70223132-70223151 | Msa0421330:CDS | 50.0% | |
| GACCATCGGGATCACTTACA+AGG | - | chr3_2:70223137-70223156 | None:intergenic | 50.0% | |
| CCCTCCTAGGTCATGAAGAA+TGG | + | chr3_2:70223497-70223516 | Msa0421330:intron | 50.0% | |
| ! | AGAGGCACACCTAATCCTAC+AGG | - | chr3_2:70223526-70223545 | None:intergenic | 50.0% |
| ! | TGTCGAGTGTTGCACACTGA+CGG | - | chr3_2:70223558-70223577 | None:intergenic | 50.0% |
| TGTGTAGGAGACACTTCTCC+GGG | + | chr3_2:70224626-70224645 | Msa0421330:intron | 50.0% | |
| AAGTGAAATCACCAGCCAGG+AGG | - | chr3_2:70224686-70224705 | None:intergenic | 50.0% | |
| GATACTAGGAGCCGTGTAAG+TGG | - | chr3_2:70225007-70225026 | None:intergenic | 50.0% | |
| CGGCTCCTAGTATCCTCAAA+AGG | + | chr3_2:70225013-70225032 | Msa0421330:three_prime_UTR | 50.0% | |
| TGCACAGGCCATGTGTACAG+TGG | + | chr3_2:70219531-70219550 | Msa0421330:five_prime_UTR | 55.0% | |
| TGAGTGGGCCACTGTACACA+TGG | - | chr3_2:70219542-70219561 | None:intergenic | 55.0% | |
| !!! | GGAGAAGCGGTTTTGTTCGG+TGG | - | chr3_2:70219781-70219800 | None:intergenic | 55.0% |
| !!! | GGCGGAGAAGCGGTTTTGTT+CGG | - | chr3_2:70219784-70219803 | None:intergenic | 55.0% |
| TTCCGATGGGTAAGGAGTGG+CGG | - | chr3_2:70219802-70219821 | None:intergenic | 55.0% | |
| AGGTTCCGATGGGTAAGGAG+TGG | - | chr3_2:70219805-70219824 | None:intergenic | 55.0% | |
| GAAGGAGGTTCCGATGGGTA+AGG | - | chr3_2:70219810-70219829 | None:intergenic | 55.0% | |
| GTGGAGAAGGAGGTTCCGAT+GGG | - | chr3_2:70219815-70219834 | None:intergenic | 55.0% | |
| GAGGAGGAAGAAGAAGAGGG+GGG | - | chr3_2:70219894-70219913 | None:intergenic | 55.0% | |
| GGAGGAGGAAGAAGAAGAGG+GGG | - | chr3_2:70219895-70219914 | None:intergenic | 55.0% | |
| CGGAGGAGGAAGAAGAAGAG+GGG | - | chr3_2:70219896-70219915 | None:intergenic | 55.0% | |
| GCGGAGGAGGAAGAAGAAGA+GGG | - | chr3_2:70219897-70219916 | None:intergenic | 55.0% | |
| AGCGGAGGAGGAAGAAGAAG+AGG | - | chr3_2:70219898-70219917 | None:intergenic | 55.0% | |
| ATCGGCGGAGGAAGTAGAAG+CGG | - | chr3_2:70219916-70219935 | None:intergenic | 55.0% | |
| GGAGATGGACGTATCATCGG+CGG | - | chr3_2:70219931-70219950 | None:intergenic | 55.0% | |
| GCCGATGATACGTCCATCTC+CGG | + | chr3_2:70219930-70219949 | Msa0421330:CDS | 55.0% | |
| TGATACGTCCATCTCCGGTC+TGG | + | chr3_2:70219935-70219954 | Msa0421330:CDS | 55.0% | |
| !! | TTGGTGTTACCCCGGTTACC+GGG | + | chr3_2:70220425-70220444 | Msa0421330:intron | 55.0% |
| TTATTAGGGCCCCATTCCCC+CGG | - | chr3_2:70220446-70220465 | None:intergenic | 55.0% | |
| GTACGCGTGCCATACCTGTT+CGG | + | chr3_2:70221113-70221132 | Msa0421330:intron | 55.0% | |
| AAGTGATCCCGATGGTCCAC+AGG | + | chr3_2:70223140-70223159 | Msa0421330:CDS | 55.0% | |
| ! | GTTGCACACTGACGGGTGTT+GGG | - | chr3_2:70223550-70223569 | None:intergenic | 55.0% |
| ! | TGTTGCACACTGACGGGTGT+TGG | - | chr3_2:70223551-70223570 | None:intergenic | 55.0% |
| ! | GTCGAGTGTTGCACACTGAC+GGG | - | chr3_2:70223557-70223576 | None:intergenic | 55.0% |
| TCGGTGGGAGAGGACCACAT+AGG | - | chr3_2:70219765-70219784 | None:intergenic | 60.0% | |
| !!! | GCGGTTTTGTTCGGTGGGAG+AGG | - | chr3_2:70219775-70219794 | None:intergenic | 60.0% |
| ! | GGTAAGGAGTGGCGGAGAAG+CGG | - | chr3_2:70219794-70219813 | None:intergenic | 60.0% |
| CTCCGCCACTCCTTACCCAT+CGG | + | chr3_2:70219797-70219816 | Msa0421330:CDS | 60.0% | |
| GGTGGAGAAGGAGGTTCCGA+TGG | - | chr3_2:70219816-70219835 | None:intergenic | 60.0% | |
| GTGACAGACGGTGGAGAAGG+AGG | - | chr3_2:70219825-70219844 | None:intergenic | 60.0% | |
| ACGGTGACAGACGGTGGAGA+AGG | - | chr3_2:70219828-70219847 | None:intergenic | 60.0% | |
| TCAACGACGGTGACAGACGG+TGG | - | chr3_2:70219834-70219853 | None:intergenic | 60.0% | |
| GGAGGAAGTAGAAGCGGAGG+AGG | - | chr3_2:70219910-70219929 | None:intergenic | 60.0% | |
| GATGGACGTATCATCGGCGG+AGG | - | chr3_2:70219928-70219947 | None:intergenic | 60.0% | |
| !! | TGGTGTTACCCCGGTTACCG+GGG | + | chr3_2:70220426-70220445 | Msa0421330:intron | 60.0% |
| ! | AGAGGACCAGAGGGCACGAT+CGG | - | chr3_2:70220597-70220616 | None:intergenic | 60.0% |
| CCGCTACCGGGTACGAAATG+CGG | - | chr3_2:70221349-70221368 | None:intergenic | 60.0% | |
| CCGCATTTCGTACCCGGTAG+CGG | + | chr3_2:70221346-70221365 | Msa0421330:intron | 60.0% | |
| TACGGGTACGGTACCGCTAC+CGG | - | chr3_2:70221362-70221381 | None:intergenic | 60.0% | |
| AGGGTGAGGGAGAGCTTGCA+AGG | - | chr3_2:70221963-70221982 | None:intergenic | 60.0% | |
| GACCTAGGAGGGCTCTACGA+GGG | - | chr3_2:70223489-70223508 | None:intergenic | 60.0% | |
| TGACCTAGGAGGGCTCTACG+AGG | - | chr3_2:70223490-70223509 | None:intergenic | 60.0% | |
| GGCGGAGGAAGTAGAAGCGG+AGG | - | chr3_2:70219913-70219932 | None:intergenic | 65.0% | |
| ! | GGTGTTACCCCGGTTACCGG+GGG | + | chr3_2:70220427-70220446 | Msa0421330:intron | 65.0% |
| TACCCCGGTTACCGGGGGAA+TGG | + | chr3_2:70220432-70220451 | Msa0421330:intron | 65.0% | |
| ACCCCGGTTACCGGGGGAAT+GGG | + | chr3_2:70220433-70220452 | Msa0421330:intron | 65.0% | |
| TTCCACCCGATCGTGCCCTC+TGG | + | chr3_2:70220588-70220607 | Msa0421330:CDS | 65.0% | |
| ! | GAGGACCAGAGGGCACGATC+GGG | - | chr3_2:70220596-70220615 | None:intergenic | 65.0% |
| ACGGGTACGGTACCGCTACC+GGG | - | chr3_2:70221361-70221380 | None:intergenic | 65.0% | |
| CTAGGAGGGCTCTACGAGGG+TGG | - | chr3_2:70223486-70223505 | None:intergenic | 65.0% | |
| CACCCTCGTAGAGCCCTCCT+AGG | + | chr3_2:70223484-70223503 | Msa0421330:intron | 65.0% | |
| !! | CACTGACGGGTGTTGGGCAG+AGG | - | chr3_2:70223544-70223563 | None:intergenic | 65.0% |
| TCTCGTTCGTAGGCGCCTCC+TGG | + | chr3_2:70224668-70224687 | Msa0421330:CDS | 65.0% | |
| GGACTGGGCCAGACCGGAGA+TGG | - | chr3_2:70219946-70219965 | None:intergenic | 70.0% | |
| GGACTGGGACTGGGCCAGAC+CGG | - | chr3_2:70219952-70219971 | None:intergenic | 70.0% | |
| CCCCATTCCCCCGGTAACCG+GGG | - | chr3_2:70220437-70220456 | None:intergenic | 70.0% | |
| CCCCGGTTACCGGGGGAATG+GGG | + | chr3_2:70220434-70220453 | Msa0421330:intron | 70.0% | |
| GCCCCATTCCCCCGGTAACC+GGG | - | chr3_2:70220438-70220457 | None:intergenic | 70.0% | |
| GGCCCCATTCCCCCGGTAAC+CGG | - | chr3_2:70220439-70220458 | None:intergenic | 70.0% | |
| ! | GACCAGAGGGCACGATCGGG+TGG | - | chr3_2:70220593-70220612 | None:intergenic | 70.0% |
| GTTCGTAGGCGCCTCCTGGC+TGG | + | chr3_2:70224672-70224691 | Msa0421330:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 70219384 | 70225114 | 70219384 | ID=Msa0421330;Name=Msa0421330 |
| chr3_2 | mRNA | 70219384 | 70225114 | 70219384 | ID=Msa0421330-mRNA-1;Parent=Msa0421330;Name=Msa0421330-mRNA-1;_AED=0.09;_eAED=0.09;_QI=342|1|1|1|1|1|9|329|429 |
| chr3_2 | exon | 70219384 | 70219986 | 70219384 | ID=Msa0421330-mRNA-1:exon:16827;Parent=Msa0421330-mRNA-1 |
| chr3_2 | exon | 70220082 | 70220174 | 70220082 | ID=Msa0421330-mRNA-1:exon:16828;Parent=Msa0421330-mRNA-1 |
| chr3_2 | exon | 70220572 | 70220676 | 70220572 | ID=Msa0421330-mRNA-1:exon:16829;Parent=Msa0421330-mRNA-1 |
| chr3_2 | exon | 70220772 | 70220924 | 70220772 | ID=Msa0421330-mRNA-1:exon:16830;Parent=Msa0421330-mRNA-1 |
| chr3_2 | exon | 70221628 | 70221726 | 70221628 | ID=Msa0421330-mRNA-1:exon:16831;Parent=Msa0421330-mRNA-1 |
| chr3_2 | exon | 70221819 | 70221947 | 70221819 | ID=Msa0421330-mRNA-1:exon:16832;Parent=Msa0421330-mRNA-1 |
| chr3_2 | exon | 70222246 | 70222425 | 70222246 | ID=Msa0421330-mRNA-1:exon:16833;Parent=Msa0421330-mRNA-1 |
| chr3_2 | exon | 70223045 | 70223161 | 70223045 | ID=Msa0421330-mRNA-1:exon:16834;Parent=Msa0421330-mRNA-1 |
| chr3_2 | exon | 70224633 | 70225114 | 70224633 | ID=Msa0421330-mRNA-1:exon:16835;Parent=Msa0421330-mRNA-1 |
| chr3_2 | five_prime_UTR | 70219384 | 70219725 | 70219384 | ID=Msa0421330-mRNA-1:five_prime_utr;Parent=Msa0421330-mRNA-1 |
| chr3_2 | CDS | 70219726 | 70219986 | 70219726 | ID=Msa0421330-mRNA-1:cds;Parent=Msa0421330-mRNA-1 |
| chr3_2 | CDS | 70220082 | 70220174 | 70220082 | ID=Msa0421330-mRNA-1:cds;Parent=Msa0421330-mRNA-1 |
| chr3_2 | CDS | 70220572 | 70220676 | 70220572 | ID=Msa0421330-mRNA-1:cds;Parent=Msa0421330-mRNA-1 |
| chr3_2 | CDS | 70220772 | 70220924 | 70220772 | ID=Msa0421330-mRNA-1:cds;Parent=Msa0421330-mRNA-1 |
| chr3_2 | CDS | 70221628 | 70221726 | 70221628 | ID=Msa0421330-mRNA-1:cds;Parent=Msa0421330-mRNA-1 |
| chr3_2 | CDS | 70221819 | 70221947 | 70221819 | ID=Msa0421330-mRNA-1:cds;Parent=Msa0421330-mRNA-1 |
| chr3_2 | CDS | 70222246 | 70222425 | 70222246 | ID=Msa0421330-mRNA-1:cds;Parent=Msa0421330-mRNA-1 |
| chr3_2 | CDS | 70223045 | 70223161 | 70223045 | ID=Msa0421330-mRNA-1:cds;Parent=Msa0421330-mRNA-1 |
| chr3_2 | CDS | 70224633 | 70224785 | 70224633 | ID=Msa0421330-mRNA-1:cds;Parent=Msa0421330-mRNA-1 |
| chr3_2 | three_prime_UTR | 70224786 | 70225114 | 70224786 | ID=Msa0421330-mRNA-1:three_prime_utr;Parent=Msa0421330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
