AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1089720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1089720 MtrunA17_Chr4g0009141 52.174 483 185 9 1 456 5 468 1.17e-142 447
Msa1089720 MtrunA17_Chr4g0009141 38.641 471 236 14 10 456 524 965 8.96e-81 273
Msa1089720 MtrunA17_Chr4g0009301 52.361 487 178 15 3 456 18 483 6.41e-136 429
Msa1089720 MtrunA17_Chr4g0009301 38.046 481 241 15 2 456 536 985 3.26e-82 277
Msa1089720 MtrunA17_Chr4g0009101 52.905 482 181 10 1 456 20 481 7.71e-136 429
Msa1089720 MtrunA17_Chr4g0009101 38.750 480 239 15 2 456 534 983 2.47e-82 278
Msa1089720 MtrunA17_Chr4g0009241 52.165 462 193 9 16 465 49 494 6.09e-131 415
Msa1089720 MtrunA17_Chr4g0009241 37.083 480 250 14 1 456 536 987 3.82e-78 265
Msa1089720 MtrunA17_Chr4g0009041 51.245 482 153 16 4 454 19 449 1.87e-125 400
Msa1089720 MtrunA17_Chr4g0009041 38.046 481 243 15 2 457 504 954 5.31e-83 280
Msa1089720 MtrunA17_Chr4g0009341 54.039 359 142 5 104 458 15 354 2.03e-119 357
Msa1089720 MtrunA17_Chr4g0009401 46.085 447 204 11 17 456 26 442 4.00e-102 334
Msa1089720 MtrunA17_Chr4g0009401 38.285 478 241 16 2 456 495 941 1.33e-78 267
Msa1089720 MtrunA17_Chr6g0454951 42.366 465 227 18 9 456 94 534 8.11e-94 307
Msa1089720 MtrunA17_Chr6g0454851 41.915 470 221 17 9 456 101 540 7.58e-93 304
Msa1089720 MtrunA17_Chr6g0455211 41.595 464 233 15 9 456 51 492 2.52e-91 299
Msa1089720 MtrunA17_Chr4g0005891 39.549 488 234 16 8 456 23 488 5.14e-91 299
Msa1089720 MtrunA17_Chr4g0005851 41.139 474 221 15 10 456 35 477 4.50e-90 296
Msa1089720 MtrunA17_Chr6g0454821 41.595 464 227 16 9 456 53 488 4.06e-89 294
Msa1089720 MtrunA17_Chr6g0454931 38.526 475 244 14 9 456 62 515 5.90e-88 286
Msa1089720 MtrunA17_Chr4g0005871 40.421 475 223 17 10 456 131 573 1.65e-87 290
Msa1089720 MtrunA17_Chr6g0455131 40.741 459 236 15 9 456 99 532 4.11e-87 289
Msa1089720 MtrunA17_Chr6g0454831 39.783 460 233 17 9 456 21 448 1.34e-86 286
Msa1089720 MtrunA17_Chr6g0455221 40.211 475 234 14 3 453 2 450 7.38e-86 285
Msa1089720 MtrunA17_Chr4g0005591 41.346 416 207 13 49 456 130 516 1.66e-82 276
Msa1089720 MtrunA17_Chr4g0009171 40.000 475 229 16 7 456 2 445 2.91e-82 277
Msa1089720 MtrunA17_Chr4g0009171 37.844 473 240 16 10 457 730 1173 8.58e-77 261
Msa1089720 MtrunA17_Chr4g0009261 55.466 247 79 1 210 456 1 216 3.93e-82 254
Msa1089720 MtrunA17_Chr7g0255681 40.044 452 232 15 14 456 1035 1456 1.78e-81 275
Msa1089720 MtrunA17_Chr7g0255681 40.576 451 221 14 14 455 39 451 4.60e-81 274
Msa1089720 MtrunA17_Chr7g0255681 39.427 454 230 17 14 455 533 953 8.05e-77 262
Msa1089720 MtrunA17_Chr6g0454971 39.690 451 234 14 14 456 68 488 3.62e-81 271
Msa1089720 MtrunA17_Chr6g0455191 39.738 458 236 16 9 456 329 756 7.65e-81 273
Msa1089720 MtrunA17_Chr6g0454961 39.872 469 224 14 10 456 42 474 2.39e-80 270
Msa1089720 MtrunA17_Chr4g0010711 37.684 475 246 15 10 461 517 964 1.82e-79 269
Msa1089720 MtrunA17_Chr4g0010711 32.314 458 268 13 8 456 33 457 7.58e-66 230
Msa1089720 MtrunA17_Chr6g0455551 39.419 482 215 14 22 456 73 524 4.39e-78 263
Msa1089720 MtrunA17_Chr7g0234891 38.987 395 206 12 71 456 1 369 3.73e-75 241
Msa1089720 MtrunA17_Chr4g0009351 39.793 387 195 11 73 453 3 357 1.49e-74 239
Msa1089720 MtrunA17_Chr6g0455031 38.667 450 238 14 14 456 49 467 1.87e-72 247
Msa1089720 MtrunA17_Chr6g0454901 46.494 271 122 6 191 454 3 257 1.67e-68 225
Msa1089720 MtrunA17_Chr6g0455251 39.783 460 230 17 9 456 38 462 4.77e-68 236
Msa1089720 MtrunA17_Chr8g0338981 35.622 466 251 20 9 464 28 454 3.71e-65 227
Msa1089720 MtrunA17_Chr8g0339011 35.518 473 240 22 9 464 26 450 1.31e-63 223
Msa1089720 MtrunA17_Chr3g0085541 34.649 456 253 16 14 456 38 461 7.75e-63 216
Msa1089720 MtrunA17_Chr8g0343801 35.177 452 243 19 17 453 34 450 6.81e-62 211
Msa1089720 MtrunA17_Chr8g0338881 34.328 469 251 17 12 453 36 474 8.21e-62 218
Msa1089720 MtrunA17_Chr6g0480271 35.320 453 247 16 13 453 36 454 1.55e-61 214
Msa1089720 MtrunA17_Chr8g0339031 33.187 455 267 15 9 453 28 455 4.29e-61 215
Msa1089720 MtrunA17_Chr6g0481001 34.396 439 256 14 21 453 45 457 1.88e-60 213
Msa1089720 MtrunA17_Chr6g0482511 35.698 451 247 18 13 453 51 468 2.73e-60 213
Msa1089720 MtrunA17_Chr6g0479631 36.384 448 247 16 13 453 36 452 3.80e-60 213
Msa1089720 MtrunA17_Chr6g0480911 33.958 480 257 19 2 453 8 455 6.77e-60 212
Msa1089720 MtrunA17_Chr6g0480451 33.778 450 258 15 13 453 100 518 1.69e-59 211
Msa1089720 MtrunA17_Chr8g0354701 37.360 447 246 17 14 453 28 447 2.81e-59 211
Msa1089720 MtrunA17_Chr3g0081531 35.118 467 253 12 11 455 6 444 4.55e-59 210
Msa1089720 MtrunA17_Chr3g0114401 42.756 283 145 6 185 464 69 337 6.50e-59 202
Msa1089720 MtrunA17_Chr3g0085731 32.900 462 259 16 9 453 32 459 7.26e-59 209
Msa1089720 MtrunA17_Chr4g0006771 35.268 448 262 12 13 455 37 461 9.40e-59 208
Msa1089720 MtrunA17_Chr4g0041611 32.889 450 270 14 6 451 30 451 1.11e-58 208
Msa1089720 MtrunA17_Chr2g0299791 35.033 451 247 18 13 451 32 448 1.16e-58 209
Msa1089720 MtrunA17_Chr8g0338901 36.629 445 244 15 14 453 55 466 2.52e-58 207
Msa1089720 MtrunA17_Chr6g0478841 34.341 463 258 17 2 453 16 443 3.12e-58 207
Msa1089720 MtrunA17_Chr2g0299881 34.177 474 259 19 1 458 27 463 1.15e-57 206
Msa1089720 MtrunA17_Chr6g0479821 35.268 448 255 16 13 453 37 456 3.22e-57 204
Msa1089720 MtrunA17_Chr6g0479641 32.456 456 256 16 13 453 36 454 3.85e-57 204
Msa1089720 MtrunA17_Chr2g0300251 36.404 456 235 19 13 451 36 453 8.90e-57 203
Msa1089720 MtrunA17_Chr6g0481011 33.871 434 261 13 23 453 50 460 9.11e-57 203
Msa1089720 MtrunA17_Chr6g0479621 33.850 452 252 19 14 453 39 455 2.35e-56 202
Msa1089720 MtrunA17_Chr6g0478741 33.038 451 260 15 13 453 25 443 4.90e-56 199
Msa1089720 MtrunA17_Chr7g0256881 35.242 454 260 13 7 456 23 446 5.91e-56 201
Msa1089720 MtrunA17_Chr5g0430531 33.787 441 242 17 14 438 26 432 6.22e-56 192
Msa1089720 MtrunA17_Chr6g0481141 32.527 455 256 16 13 453 87 504 6.31e-56 201
Msa1089720 MtrunA17_Chr6g0478771 33.113 453 257 16 13 453 25 443 6.34e-56 199
Msa1089720 MtrunA17_Chr6g0479051 33.259 448 242 16 13 453 25 422 1.19e-55 199
Msa1089720 MtrunA17_Chr8g0352221 33.478 460 256 22 9 459 26 444 1.34e-55 199
Msa1089720 MtrunA17_Chr8g0352211 33.488 430 244 15 40 456 60 460 2.42e-55 199
Msa1089720 MtrunA17_Chr6g0479731 33.628 452 253 17 13 453 36 451 2.45e-55 196
Msa1089720 MtrunA17_Chr6g0480181 35.320 453 245 19 13 453 29 445 2.58e-55 197
Msa1089720 MtrunA17_Chr2g0299851 34.848 462 253 18 1 451 23 447 4.51e-55 198
Msa1089720 MtrunA17_Chr6g0481221 32.018 456 257 17 13 453 36 453 6.34e-55 192
Msa1089720 MtrunA17_Chr7g0248511 33.698 457 261 14 6 454 36 458 7.46e-55 197
Msa1089720 MtrunA17_Chr2g0299841 34.467 441 248 17 21 451 80 489 8.17e-55 197
Msa1089720 MtrunA17_Chr6g0479671 33.778 450 255 17 13 451 34 451 9.26e-55 197
Msa1089720 MtrunA17_Chr4g0025831 34.286 455 246 16 14 453 37 453 1.15e-54 196
Msa1089720 MtrunA17_Chr6g0478451 35.111 450 248 17 13 451 38 454 1.52e-54 196
Msa1089720 MtrunA17_Chr5g0420331 33.196 485 259 19 1 456 1 449 1.88e-54 196
Msa1089720 MtrunA17_Chr7g0248121 34.624 465 246 15 6 454 30 452 2.20e-54 196
Msa1089720 MtrunA17_Chr8g0368251 32.301 452 259 16 14 453 37 453 3.50e-54 195
Msa1089720 MtrunA17_Chr8g0354711 34.261 467 251 16 11 453 8 442 4.73e-54 195
Msa1089720 MtrunA17_Chr2g0299921 34.848 462 251 18 1 451 24 446 5.14e-54 195
Msa1089720 MtrunA17_Chr8g0354721 33.925 451 257 16 13 453 27 446 6.38e-54 195
Msa1089720 MtrunA17_Chr6g0479651 35.189 449 252 17 14 453 39 457 6.55e-54 194
Msa1089720 MtrunA17_Chr6g0480521 33.556 450 255 15 13 451 36 452 7.87e-54 194
Msa1089720 MtrunA17_Chr6g0479001 32.553 470 269 17 13 467 25 461 8.55e-54 194
Msa1089720 MtrunA17_Chr6g0480041 33.996 453 252 19 13 453 36 453 1.12e-53 194
Msa1089720 MtrunA17_Chr4g0041441 31.681 464 278 17 6 462 15 446 1.31e-53 194
Msa1089720 MtrunA17_Chr5g0420341 32.083 480 271 15 1 456 1 449 1.45e-53 193
Msa1089720 MtrunA17_Chr4g0025741 33.185 449 259 14 14 453 37 453 2.87e-53 192
Msa1089720 MtrunA17_Chr6g0484161 31.942 479 251 17 13 453 36 477 5.21e-53 192
Msa1089720 MtrunA17_Chr6g0480311 33.042 457 252 17 13 453 23 441 7.58e-53 192
Msa1089720 MtrunA17_Chr7g0248521 33.983 462 256 15 6 456 30 453 1.14e-52 191
Msa1089720 MtrunA17_Chr6g0479701 33.781 447 259 17 13 451 40 457 1.26e-52 191
Msa1089720 MtrunA17_Chr4g0025751 33.114 456 254 17 14 455 37 455 1.65e-52 190
Msa1089720 MtrunA17_Chr4g0025811 32.965 452 256 15 14 453 37 453 2.13e-52 190
Msa1089720 MtrunA17_Chr8g0370511 32.886 447 251 16 23 456 38 448 2.44e-52 190
Msa1089720 MtrunA17_Chr6g0480091 33.566 429 238 18 13 429 36 429 5.53e-52 181
Msa1089720 MtrunA17_Chr6g0482111 33.970 471 265 17 9 461 27 469 8.34e-52 189
Msa1089720 MtrunA17_Chr3g0084731 33.787 441 252 14 20 451 41 450 1.27e-51 188
Msa1089720 MtrunA17_Chr3g0084151 31.847 471 266 17 1 451 6 441 1.28e-51 188
Msa1089720 MtrunA17_Chr4g0025701 31.991 447 267 13 14 453 37 453 1.95e-51 184
Msa1089720 MtrunA17_Chr6g0486521 31.513 476 270 14 1 451 9 453 3.11e-51 187
Msa1089720 MtrunA17_Chr6g0480381 34.690 467 251 18 13 464 41 468 3.12e-51 180
Msa1089720 MtrunA17_Chr8g0353371 32.308 455 260 18 20 453 35 462 3.58e-51 187
Msa1089720 MtrunA17_Chr6g0479591 31.656 477 269 17 13 459 36 485 6.82e-51 186
Msa1089720 MtrunA17_Chr4g0041231 33.775 453 262 17 6 451 32 453 7.42e-51 186
Msa1089720 MtrunA17_Chr2g0319851 30.736 462 284 17 6 462 65 495 1.69e-50 185
Msa1089720 MtrunA17_Chr4g0010651 32.265 437 263 12 23 453 37 446 2.44e-50 184
Msa1089720 MtrunA17_Chr8g0348541 32.965 452 272 12 6 454 34 457 3.44e-50 184
Msa1089720 MtrunA17_Chr6g0480151 32.735 446 252 16 21 453 43 453 4.30e-50 182
Msa1089720 MtrunA17_Chr4g0014831 41.767 249 127 5 210 456 1 233 5.97e-50 180
Msa1089720 MtrunA17_Chr8g0339021 33.187 455 268 17 9 456 17 442 7.35e-50 182
Msa1089720 MtrunA17_Chr8g0338851 34.726 383 201 15 82 453 4 348 8.22e-50 176
Msa1089720 MtrunA17_Chr6g0486271 32.051 468 270 12 4 450 12 452 8.41e-50 180
Msa1089720 MtrunA17_Chr6g0486221 31.042 480 275 14 1 451 1 453 1.00e-49 182
Msa1089720 MtrunA17_Chr4g0041241 32.751 458 270 17 6 456 32 458 1.64e-49 182
Msa1089720 MtrunA17_Chr4g0041931 31.072 457 271 15 6 451 33 456 7.89e-49 180
Msa1089720 MtrunA17_Chr4g0005291 30.252 476 273 18 1 453 61 500 8.47e-49 179
Msa1089720 MtrunA17_Chr6g0482441 30.213 470 266 15 12 453 10 445 2.04e-48 179
Msa1089720 MtrunA17_Chr3g0084721 32.584 445 266 13 13 451 36 452 2.10e-48 178
Msa1089720 MtrunA17_Chr3g0102121 32.766 470 263 17 9 456 16 454 3.71e-48 178
Msa1089720 MtrunA17_Chr7g0223531 32.538 461 262 21 14 456 29 458 5.41e-48 177
Msa1089720 MtrunA17_Chr4g0005391 30.415 434 265 15 24 453 90 490 5.70e-48 177
Msa1089720 MtrunA17_Chr4g0042011 28.602 472 285 14 4 453 16 457 6.19e-48 177
Msa1089720 MtrunA17_Chr3g0084841 32.366 448 264 14 13 451 36 453 9.25e-48 176
Msa1089720 MtrunA17_Chr8g0371711 31.818 462 248 15 13 453 38 453 1.43e-47 176
Msa1089720 MtrunA17_Chr3g0119001 31.929 451 265 19 9 451 35 451 1.62e-47 176
Msa1089720 MtrunA17_Chr1g0146421 30.769 455 262 16 14 453 37 453 2.96e-47 175
Msa1089720 MtrunA17_Chr6g0486481 30.851 470 275 13 4 451 12 453 7.28e-47 174
Msa1089720 MtrunA17_Chr5g0442761 31.838 468 265 14 11 453 14 452 9.73e-47 174
Msa1089720 MtrunA17_Chr6g0486731 30.579 484 283 14 1 461 9 462 1.01e-46 173
Msa1089720 MtrunA17_Chr8g0372681 31.049 467 267 21 10 453 14 448 2.21e-46 172
Msa1089720 MtrunA17_Chr3g0102171 31.410 468 272 16 9 456 16 454 2.93e-46 172
Msa1089720 MtrunA17_Chr6g0485991 32.059 471 268 15 4 451 12 453 3.24e-46 172
Msa1089720 MtrunA17_Chr3g0102271 31.624 468 270 18 10 456 17 455 3.81e-46 172
Msa1089720 MtrunA17_Chr6g0486301 32.272 471 265 14 5 451 13 453 4.04e-46 172
Msa1089720 MtrunA17_Chr6g0486311 29.622 476 279 15 1 451 9 453 5.42e-46 171
Msa1089720 MtrunA17_Chr4g0041951 32.558 473 265 17 4 453 70 511 5.54e-46 171
Msa1089720 MtrunA17_Chr2g0299811 40.161 249 133 5 204 451 62 295 7.92e-46 170
Msa1089720 MtrunA17_Chr4g0010521 32.420 438 260 14 23 453 36 444 8.29e-46 171
Msa1089720 MtrunA17_Chr6g0480461 29.268 492 259 14 21 453 43 504 9.00e-46 171
Msa1089720 MtrunA17_Chr3g0084851 32.366 448 263 15 13 451 36 452 9.55e-46 171
Msa1089720 MtrunA17_Chr7g0242811 28.211 475 282 17 5 461 52 485 1.21e-45 170
Msa1089720 MtrunA17_Chr6g0451551 31.347 453 265 18 13 453 178 596 1.27e-45 170
Msa1089720 MtrunA17_Chr6g0486361 29.512 471 286 10 1 451 9 453 1.53e-45 170
Msa1089720 MtrunA17_Chr3g0102281 31.197 468 273 16 9 456 16 454 3.76e-45 169
Msa1089720 MtrunA17_Chr7g0242751 29.039 458 272 15 23 465 73 492 5.90e-45 167
Msa1089720 MtrunA17_Chr2g0299561 30.063 479 267 16 4 451 12 453 9.28e-45 168
Msa1089720 MtrunA17_Chr1g0172541 31.013 474 258 16 12 453 10 446 9.53e-45 168
Msa1089720 MtrunA17_Chr6g0482321 31.683 505 262 16 1 453 1 474 1.21e-44 167
Msa1089720 MtrunA17_Chr5g0417081 37.450 251 140 6 204 453 1 235 3.11e-44 160
Msa1089720 MtrunA17_Chr6g0481331 33.409 443 254 14 23 453 85 498 4.00e-44 166
Msa1089720 MtrunA17_Chr6g0482471 31.102 508 265 13 1 453 1 478 6.10e-44 165
Msa1089720 MtrunA17_Chr2g0298531 30.123 488 268 20 2 459 12 456 9.41e-44 165
Msa1089720 MtrunA17_Chr3g0119601 34.298 449 259 16 14 456 31 449 1.42e-43 164
Msa1089720 MtrunA17_Chr3g0077971 30.862 499 262 13 7 453 5 472 1.58e-43 164
Msa1089720 MtrunA17_Chr6g0474801 32.438 447 251 15 23 453 44 455 1.97e-43 163
Msa1089720 MtrunA17_Chr8g0363851 37.132 272 157 6 185 454 10 269 2.05e-43 164
Msa1089720 MtrunA17_Chr6g0482161 31.839 446 258 15 20 453 37 448 2.29e-43 161
Msa1089720 MtrunA17_Chr3g0084771 31.477 413 249 12 13 418 33 418 2.92e-43 157
Msa1089720 MtrunA17_Chr8g0343671 29.705 441 278 14 16 453 77 488 3.74e-43 163
Msa1089720 MtrunA17_Chr2g0319821 28.788 462 286 16 6 453 54 486 9.89e-43 162
Msa1089720 MtrunA17_Chr8g0342911 29.774 487 272 19 10 464 25 473 1.12e-42 162
Msa1089720 MtrunA17_Chr4g0005331 30.372 484 265 16 2 458 81 519 3.05e-42 160
Msa1089720 MtrunA17_Chr8g0343581 29.424 469 273 17 6 458 74 500 7.75e-42 159
Msa1089720 MtrunA17_Chr2g0298291 29.253 482 259 21 2 451 12 443 9.74e-42 159
Msa1089720 MtrunA17_Chr8g0351551 28.687 495 278 18 2 464 9 460 2.15e-41 158
Msa1089720 MtrunA17_Chr6g0474761 33.110 447 248 16 23 453 44 455 3.38e-41 155
Msa1089720 MtrunA17_Chr6g0480421 34.268 321 181 9 142 453 12 311 3.57e-41 157
Msa1089720 MtrunA17_Chr3g0118981 30.870 460 263 18 6 451 33 451 3.57e-41 157
Msa1089720 MtrunA17_Chr6g0482141 30.677 502 263 19 7 453 13 484 6.62e-41 156
Msa1089720 MtrunA17_Chr6g0481251 35.315 286 157 7 177 453 44 310 8.76e-41 156
Msa1089720 MtrunA17_Chr2g0296461 36.546 249 136 6 210 453 1 232 1.10e-40 145
Msa1089720 MtrunA17_Chr4g0018431 29.688 448 277 16 9 450 33 448 2.40e-40 155
Msa1089720 MtrunA17_Chr8g0350801 31.515 495 262 16 7 453 5 470 3.42e-40 154
Msa1089720 MtrunA17_Chr6g0479761 35.786 299 167 8 161 453 30 309 3.82e-40 153
Msa1089720 MtrunA17_Chr8g0343631 29.911 448 260 17 20 453 58 465 5.26e-40 154
Msa1089720 MtrunA17_Chr6g0482351 30.178 507 271 15 1 453 1 478 9.49e-40 153
Msa1089720 MtrunA17_Chr8g0342741 29.930 431 269 15 35 461 46 447 1.15e-39 150
Msa1089720 MtrunA17_Chr6g0480321 36.396 283 158 7 177 453 45 311 1.48e-39 152
Msa1089720 MtrunA17_Chr8g0353001 28.049 492 286 19 1 461 3 457 1.66e-39 152
Msa1089720 MtrunA17_Chr8g0342781 29.512 471 284 17 10 461 6 447 6.96e-39 148
Msa1089720 MtrunA17_Chr1g0172811 30.901 466 249 16 14 456 37 452 1.41e-38 149
Msa1089720 MtrunA17_Chr8g0342641 29.598 473 271 20 10 461 6 437 1.63e-38 149
Msa1089720 MtrunA17_Chr8g0354681 30.128 468 289 17 13 467 27 469 1.74e-38 149
Msa1089720 MtrunA17_Chr8g0342201 27.310 487 294 19 9 468 48 501 3.03e-38 147
Msa1089720 MtrunA17_Chr4g0041431 35.200 250 147 5 204 453 37 271 5.27e-38 147
Msa1089720 MtrunA17_Chr7g0242801 27.646 463 285 17 6 453 98 525 7.96e-38 147
Msa1089720 MtrunA17_Chr5g0414761 40.816 245 130 4 210 453 1 231 4.70e-37 145
Msa1089720 MtrunA17_Chr8g0342691 28.571 476 282 15 10 461 6 447 6.05e-37 145
Msa1089720 MtrunA17_Chr2g0319921 26.087 460 262 15 6 454 66 458 1.89e-36 143
Msa1089720 MtrunA17_Chr4g0020591 31.767 447 253 15 33 468 53 458 3.51e-36 142
Msa1089720 MtrunA17_Chr6g0482491 31.098 492 255 17 8 453 6 459 1.13e-35 141
Msa1089720 MtrunA17_Chr1g0172831 30.388 464 242 18 14 456 37 440 3.16e-35 139
Msa1089720 MtrunA17_Chr8g0350071 36.032 247 137 7 210 453 1 229 3.81e-35 134
Msa1089720 MtrunA17_Chr3g0102131 31.209 455 263 17 14 456 38 454 1.46e-34 137
Msa1089720 MtrunA17_Chr3g0102261 31.195 452 267 16 14 456 38 454 1.62e-34 137
Msa1089720 MtrunA17_Chr4g0005101 30.021 483 278 16 5 463 48 494 2.07e-34 137
Msa1089720 MtrunA17_Chr4g0041941 26.860 484 304 12 8 468 5 461 2.92e-34 136
Msa1089720 MtrunA17_Chr7g0243021 27.198 364 227 13 6 360 23 357 6.37e-34 130
Msa1089720 MtrunA17_Chr4g0005401 30.243 453 259 15 20 458 51 460 8.34e-34 135
Msa1089720 MtrunA17_Chr6g0480051 35.178 253 142 6 204 453 1 234 8.58e-34 135
Msa1089720 MtrunA17_Chr5g0394051 27.366 391 250 10 5 390 34 395 2.80e-33 129
Msa1089720 MtrunA17_Chr7g0242781 31.102 254 156 6 210 461 1 237 4.12e-33 129
Msa1089720 MtrunA17_Chr8g0342131 26.860 484 284 20 10 461 16 461 8.98e-33 132
Msa1089720 MtrunA17_Chr1g0153511 30.568 458 243 17 14 463 29 419 1.85e-32 131
Msa1089720 MtrunA17_Chr5g0439951 28.392 479 283 19 3 461 8 446 3.91e-32 130
Msa1089720 MtrunA17_Chr8g0353351 27.069 447 263 14 21 448 40 442 3.93e-31 125
Msa1089720 MtrunA17_Chr8g0342791 27.253 466 285 12 10 461 6 431 4.94e-31 127
Msa1089720 MtrunA17_Chr8g0342671 28.511 470 273 18 7 451 4 435 1.04e-30 126
Msa1089720 MtrunA17_Chr5g0417071 33.068 251 110 5 204 453 1 194 2.59e-30 124
Msa1089720 MtrunA17_Chr8g0343611 32.296 257 159 5 198 453 38 280 3.12e-30 123
Msa1089720 MtrunA17_Chr8g0342161 29.243 383 207 17 9 361 14 362 6.31e-30 120
Msa1089720 MtrunA17_Chr8g0343681 29.377 337 206 12 26 357 76 385 8.56e-30 121
Msa1089720 MtrunA17_Chr6g0480981 44.025 159 76 4 204 362 79 224 9.82e-30 122
Msa1089720 MtrunA17_Chr4g0005261 28.795 448 275 13 24 463 39 450 6.14e-29 120
Msa1089720 MtrunA17_Chr4g0005731 27.386 482 283 16 4 458 2 443 9.79e-29 119
Msa1089720 MtrunA17_Chr8g0392051 34.146 246 139 5 210 453 1 225 1.28e-28 117
Msa1089720 MtrunA17_Chr8g0353401 26.906 446 266 16 20 448 36 438 1.37e-28 118
Msa1089720 MtrunA17_Chr2g0330121 33.333 240 142 7 215 453 44 266 2.22e-28 119
Msa1089720 MtrunA17_Chr8g0353361 25.959 443 273 15 21 448 40 442 2.55e-28 117
Msa1089720 MtrunA17_Chr8g0342621 27.468 466 289 13 6 451 2 438 1.54e-27 116
Msa1089720 MtrunA17_Chr4g0005371 32.258 248 148 7 210 454 1 231 2.74e-26 107
Msa1089720 MtrunA17_Chr6g0482191 31.985 272 123 7 185 453 65 277 6.01e-26 111
Msa1089720 MtrunA17_Chr8g0350091 28.090 445 260 19 10 429 11 420 1.09e-25 108
Msa1089720 MtrunA17_Chr8g0350121 28.922 408 247 16 32 430 50 423 1.81e-25 108
Msa1089720 MtrunA17_Chr8g0353431 26.150 413 257 13 48 448 52 428 3.91e-25 108
Msa1089720 MtrunA17_Chr8g0338831 29.377 337 190 15 9 321 26 338 2.83e-24 103
Msa1089720 MtrunA17_Chr8g0343661 39.241 158 93 2 298 454 3 158 3.59e-24 106
Msa1089720 MtrunA17_Chr6g0481191 38.255 149 83 3 308 453 1 143 1.14e-23 102
Msa1089720 MtrunA17_Chr3g0104861 30.526 475 247 19 12 453 17 441 4.67e-23 102
Msa1089720 MtrunA17_Chr4g0009031 81.132 53 10 0 184 236 2 54 7.07e-23 92.0
Msa1089720 MtrunA17_Chr2g0302011 28.250 400 236 17 32 419 73 433 1.03e-22 100
Msa1089720 MtrunA17_Chr4g0009021 42.623 122 66 3 336 456 3 121 1.43e-22 94.0
Msa1089720 MtrunA17_Chr8g0379341 38.406 138 73 2 215 352 31 156 2.26e-21 90.5
Msa1089720 MtrunA17_Chr3g0102251 30.258 271 154 11 10 260 17 272 6.69e-20 89.4
Msa1089720 MtrunA17_Chr1g0181061 43.750 112 56 3 285 393 39 146 1.51e-19 86.3
Msa1089720 MtrunA17_Chr6g0480971 29.730 222 142 7 23 239 35 247 1.97e-19 87.8
Msa1089720 MtrunA17_Chr4g0041271 36.765 136 74 3 210 345 1 124 2.51e-18 80.9
Msa1089720 MtrunA17_Chr7g0257531 43.636 110 58 3 348 456 1 107 8.62e-18 86.3
Msa1089720 MtrunA17_Chr4g0005351 29.141 326 181 11 24 337 119 406 9.64e-16 79.0
Msa1089720 MtrunA17_Chr5g0415821 40.870 115 53 4 215 328 54 154 1.05e-15 74.3
Msa1089720 MtrunA17_Chr6g0455161 43.299 97 44 1 209 305 144 229 4.92e-15 74.3
Msa1089720 MtrunA17_Chr5g0417031 39.655 116 58 3 204 319 1 104 1.89e-14 69.3
Msa1089720 MtrunA17_Chr6g0480991 35.433 127 78 3 305 430 1 124 2.94e-14 70.1
Msa1089720 MtrunA17_Chr6g0486451 29.091 275 160 10 4 257 12 272 4.76e-13 69.7
Msa1089720 MtrunA17_Chr5g0444051 32.584 178 86 7 12 170 188 350 1.38e-12 68.9
Msa1089720 MtrunA17_Chr6g0455121 41.573 89 46 3 36 121 20 105 1.70e-12 65.1
Msa1089720 MtrunA17_Chr5g0417041 40.187 107 59 3 348 453 10 112 1.90e-12 67.8
Msa1089720 MtrunA17_Chr6g0480061 35.135 148 79 8 13 156 38 172 1.93e-12 65.9
Msa1089720 MtrunA17_Chr8g0362611 36.496 137 74 8 14 150 38 161 2.80e-12 67.4
Msa1089720 MtrunA17_Chr3g0089781 27.308 260 153 9 204 450 197 433 3.38e-12 68.9
Msa1089720 MtrunA17_Chr2g0298301 31.405 121 63 4 2 106 12 128 7.22e-12 63.2
Msa1089720 MtrunA17_Chr8g0362601 35.036 137 76 7 14 150 38 161 8.53e-12 66.2
Msa1089720 MtrunA17_Chr7g0248531 27.547 265 145 12 204 450 185 420 8.93e-12 67.8
Msa1089720 MtrunA17_Chr5g0443771 32.386 176 99 8 14 186 244 402 1.88e-11 65.9
Msa1089720 MtrunA17_Chr3g0090141 26.190 252 154 9 204 444 197 427 2.40e-11 66.2
Msa1089720 MtrunA17_Chr3g0089541 26.415 265 149 10 204 450 201 437 2.47e-11 66.2
Msa1089720 MtrunA17_Chr3g0090651 27.308 260 153 10 204 450 197 433 4.16e-11 65.5
Msa1089720 MtrunA17_Chr3g0089651 26.923 260 154 9 204 450 201 437 7.29e-11 64.7
Msa1089720 MtrunA17_Chr3g0090431 25.794 252 155 9 204 444 69 299 7.35e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1089720 AT5G17680.1 33.107 441 239 15 23 451 45 441 2.70e-52 191
Msa1089720 AT5G17680.2 33.107 441 240 16 23 451 45 442 1.18e-51 189
Msa1089720 AT1G27170.2 30.787 432 266 13 28 454 46 449 3.57e-48 178
Msa1089720 AT5G36930.4 32.653 441 253 10 22 454 40 444 4.17e-47 175
Msa1089720 AT5G36930.1 32.653 441 253 10 22 454 40 444 4.17e-47 175
Msa1089720 AT5G36930.2 32.653 441 253 10 22 454 43 447 4.18e-47 175
Msa1089720 AT5G36930.3 32.653 441 253 10 22 454 40 444 4.61e-47 175
Msa1089720 AT1G27170.1 31.057 454 275 16 9 454 26 449 6.68e-47 174
Msa1089720 AT4G16860.1 30.047 426 249 14 40 454 55 442 1.49e-46 174
Msa1089720 AT1G63880.2 30.505 436 263 14 23 451 41 443 2.12e-46 172
Msa1089720 AT1G27180.1 30.110 455 277 13 14 454 195 622 3.51e-46 172
Msa1089720 AT1G27180.5 30.110 455 277 13 14 454 31 458 5.25e-46 172
Msa1089720 AT1G27180.8 30.110 455 277 13 14 454 31 458 5.25e-46 172
Msa1089720 AT1G63880.1 30.505 436 263 14 23 451 41 443 5.82e-46 172
Msa1089720 AT4G16950.2 29.645 479 277 16 1 454 1 444 8.34e-46 171
Msa1089720 AT4G16950.5 29.645 479 277 16 1 454 1 444 8.45e-46 171
Msa1089720 AT4G16950.3 29.645 479 277 16 1 454 1 444 9.34e-46 171
Msa1089720 AT4G16950.4 29.645 479 277 16 1 454 1 444 9.62e-46 171
Msa1089720 AT4G16950.6 29.645 479 277 16 1 454 1 444 1.08e-45 171
Msa1089720 AT4G16950.1 29.645 479 277 16 1 454 1 444 1.14e-45 171
Msa1089720 AT4G16920.4 30.023 433 240 14 40 454 51 438 1.52e-45 171
Msa1089720 AT4G16920.7 30.023 433 240 14 40 454 51 438 1.52e-45 171
Msa1089720 AT4G16920.9 30.211 427 247 13 40 454 51 438 1.61e-45 171
Msa1089720 AT4G16920.1 30.211 427 247 13 40 454 51 438 1.70e-45 171
Msa1089720 AT4G16920.3 30.023 433 240 14 40 454 51 438 1.94e-45 170
Msa1089720 AT4G16920.5 30.023 433 240 14 40 454 51 438 1.94e-45 170
Msa1089720 AT4G16920.6 30.023 433 240 14 40 454 51 438 2.04e-45 170
Msa1089720 AT4G16920.2 30.023 433 240 14 40 454 51 438 2.22e-45 170
Msa1089720 AT4G16920.8 30.023 433 240 14 40 454 51 438 2.22e-45 170
Msa1089720 AT5G48770.1 29.979 467 264 16 6 453 24 446 2.87e-45 170
Msa1089720 AT5G41750.1 32.533 458 253 21 9 451 25 441 4.11e-45 169
Msa1089720 AT5G41750.2 32.533 458 253 21 9 451 25 441 4.11e-45 169
Msa1089720 AT5G18370.1 31.910 445 263 17 23 453 88 506 5.23e-45 169
Msa1089720 AT1G17600.1 30.629 493 275 17 1 463 1 456 7.34e-45 168
Msa1089720 AT5G41550.1 31.891 439 255 13 23 451 40 444 1.55e-44 167
Msa1089720 AT3G44670.1 32.366 448 241 18 23 451 121 525 2.49e-44 167
Msa1089720 AT3G44670.2 32.366 448 241 18 23 451 121 525 2.49e-44 167
Msa1089720 AT5G11250.3 30.310 452 250 16 23 453 7 414 1.12e-43 165
Msa1089720 AT5G11250.1 30.310 452 250 16 23 453 7 414 1.12e-43 165
Msa1089720 AT5G11250.2 30.222 450 253 16 23 453 89 496 1.13e-43 165
Msa1089720 AT3G04220.2 30.493 446 253 15 23 451 90 495 1.54e-43 163
Msa1089720 AT3G04220.1 30.493 446 253 15 23 451 90 495 2.94e-43 163
Msa1089720 AT3G04220.3 30.493 446 253 15 23 451 90 495 3.60e-43 163
Msa1089720 AT3G44480.2 31.778 450 245 18 23 453 125 531 5.35e-43 163
Msa1089720 AT3G44480.4 31.778 450 245 18 23 453 125 531 5.45e-43 163
Msa1089720 AT3G44480.1 31.778 450 245 18 23 453 125 531 5.45e-43 163
Msa1089720 AT3G44630.2 31.900 442 255 17 23 453 121 527 6.21e-43 163
Msa1089720 AT3G44630.1 31.900 442 255 17 23 453 121 527 6.21e-43 163
Msa1089720 AT3G44630.4 31.900 442 255 17 23 453 121 527 6.21e-43 163
Msa1089720 AT3G44630.3 31.900 442 255 17 23 453 121 527 6.57e-43 163
Msa1089720 AT3G44480.3 31.778 450 245 18 23 453 125 531 7.49e-43 162
Msa1089720 AT3G44480.5 31.778 450 245 18 23 453 125 531 7.49e-43 162
Msa1089720 AT4G16890.2 30.126 478 270 18 1 454 12 449 1.04e-42 162
Msa1089720 AT4G16890.3 30.126 478 270 18 1 454 3 440 1.65e-42 162
Msa1089720 AT4G16890.5 30.126 478 270 18 1 454 3 440 1.77e-42 162
Msa1089720 AT4G16890.1 30.126 478 270 18 1 454 12 449 1.93e-42 161
Msa1089720 AT1G64070.1 29.358 436 268 14 23 451 41 443 2.09e-42 161
Msa1089720 AT1G63870.1 29.630 432 269 16 23 451 44 443 4.54e-42 160
Msa1089720 AT5G51630.1 30.490 469 274 17 3 451 2 438 5.80e-42 160
Msa1089720 AT4G16960.1 29.698 431 244 16 40 453 55 443 1.09e-41 159
Msa1089720 AT4G16940.6 29.698 431 244 16 40 453 11 399 1.55e-41 159
Msa1089720 AT4G16940.1 29.698 431 244 16 40 453 11 399 1.56e-41 159
Msa1089720 AT4G16940.2 29.698 431 244 16 40 453 11 399 1.56e-41 159
Msa1089720 AT4G16940.3 29.698 431 244 16 40 453 11 399 1.56e-41 159
Msa1089720 AT4G16940.5 29.698 431 244 16 40 453 11 399 1.56e-41 159
Msa1089720 AT4G16940.4 29.698 431 244 16 40 453 11 399 1.56e-41 159
Msa1089720 AT5G51630.5 33.168 404 234 16 53 451 2 374 1.11e-40 156
Msa1089720 AT5G41540.1 31.293 441 256 16 23 451 38 443 1.51e-40 155
Msa1089720 AT5G51630.2 32.506 403 238 14 53 451 2 374 1.95e-40 155
Msa1089720 AT5G51630.4 32.506 403 238 14 53 451 2 374 2.21e-40 155
Msa1089720 AT5G51630.6 32.506 403 238 14 53 451 2 374 2.21e-40 155
Msa1089720 AT5G40910.1 30.556 432 262 13 23 451 39 435 3.46e-40 155
Msa1089720 AT5G40910.9 30.556 432 262 13 23 451 39 435 3.46e-40 155
Msa1089720 AT4G11170.1 29.079 478 276 18 2 453 3 443 5.15e-40 154
Msa1089720 AT5G44510.4 29.932 441 260 17 23 451 67 470 5.31e-40 154
Msa1089720 AT5G44510.1 29.932 441 260 17 23 451 67 470 5.47e-40 154
Msa1089720 AT5G44510.3 29.932 441 260 17 23 451 67 470 5.72e-40 154
Msa1089720 AT5G44510.2 29.932 441 260 17 23 451 67 470 7.25e-40 154
Msa1089720 AT5G17970.1 29.083 447 265 16 23 453 43 453 7.91e-40 153
Msa1089720 AT5G18360.1 30.112 445 255 17 23 453 43 445 8.26e-40 153
Msa1089720 AT5G49140.1 30.159 441 263 16 23 453 42 447 8.90e-40 153
Msa1089720 AT3G44400.2 30.892 437 253 14 23 451 75 470 1.85e-39 152
Msa1089720 AT3G44400.1 30.892 437 253 14 23 451 75 470 1.85e-39 152
Msa1089720 AT3G44400.4 30.892 437 253 14 23 451 75 470 1.85e-39 152
Msa1089720 AT3G44400.5 30.892 437 253 14 23 451 75 470 1.85e-39 152
Msa1089720 AT3G44400.3 30.892 437 253 14 23 451 75 470 1.85e-39 152
Msa1089720 AT5G46260.1 28.659 492 268 17 1 454 1 447 3.30e-39 152
Msa1089720 AT5G58120.1 29.306 447 261 17 20 451 39 445 4.30e-39 151
Msa1089720 AT1G27180.3 29.252 441 267 12 29 454 50 460 9.10e-39 150
Msa1089720 AT1G27180.2 29.252 441 267 12 29 454 50 460 9.16e-39 150
Msa1089720 AT5G46270.3 27.593 482 287 14 1 454 1 448 2.97e-38 149
Msa1089720 AT5G46270.2 27.593 482 287 14 1 454 1 448 3.76e-38 149
Msa1089720 AT5G46490.8 27.926 487 280 16 1 454 1 449 5.03e-38 146
Msa1089720 AT2G16870.1 28.414 454 278 16 23 463 39 458 9.88e-38 147
Msa1089720 AT4G14370.2 30.958 449 245 17 23 451 41 444 1.23e-37 147
Msa1089720 AT4G14370.3 30.958 449 245 17 23 451 41 444 1.23e-37 147
Msa1089720 AT5G41740.1 30.549 455 254 20 9 451 28 432 1.39e-37 147
Msa1089720 AT5G41740.2 30.549 455 254 20 9 451 28 432 1.44e-37 147
Msa1089720 AT1G56510.1 28.571 434 272 15 23 451 40 440 1.53e-37 147
Msa1089720 AT5G46270.4 28.668 443 270 13 24 454 51 459 1.57e-37 147
Msa1089720 AT5G46270.1 28.668 443 270 13 24 454 51 459 1.59e-37 147
Msa1089720 AT5G46270.5 28.668 443 270 13 24 454 51 459 1.59e-37 147
Msa1089720 AT5G46490.7 29.018 448 263 15 24 454 80 489 2.35e-37 144
Msa1089720 AT5G46490.5 29.018 448 263 15 24 454 80 489 2.35e-37 144
Msa1089720 AT5G46490.3 29.018 448 263 15 24 454 97 506 2.62e-37 144
Msa1089720 AT5G46490.2 27.926 487 280 16 1 454 1 449 3.45e-37 145
Msa1089720 AT4G08450.2 30.524 439 261 18 24 451 39 444 3.56e-37 145
Msa1089720 AT4G08450.1 30.524 439 261 18 24 451 39 444 4.00e-37 145
Msa1089720 AT1G72840.1 30.000 460 255 18 14 453 34 446 4.23e-37 145
Msa1089720 AT1G72840.2 30.000 460 255 18 14 453 34 446 4.69e-37 145
Msa1089720 AT1G72840.3 30.000 460 255 18 14 453 34 446 4.69e-37 145
Msa1089720 AT5G18350.1 29.193 483 281 17 3 453 11 464 4.84e-37 145
Msa1089720 AT5G46490.6 29.018 448 263 15 24 454 80 489 5.25e-37 144
Msa1089720 AT5G46490.4 29.018 448 263 15 24 454 97 506 5.43e-37 144
Msa1089720 AT4G12010.1 31.193 436 262 16 23 451 38 442 1.73e-36 144
Msa1089720 AT4G14370.1 30.337 445 246 16 27 451 1 401 2.09e-36 143
Msa1089720 AT1G65850.2 28.829 444 265 17 23 451 75 482 3.54e-36 143
Msa1089720 AT1G65850.1 28.829 444 265 17 23 451 60 467 3.71e-36 142
Msa1089720 AT1G56540.1 28.009 432 278 12 23 451 42 443 6.21e-36 142
Msa1089720 AT4G16900.3 29.187 418 253 13 40 453 54 432 8.65e-36 140
Msa1089720 AT5G40100.1 33.261 460 251 18 14 457 31 450 1.04e-35 141
Msa1089720 AT4G16900.1 29.187 418 253 12 40 453 54 432 1.38e-35 141
Msa1089720 AT1G56520.5 28.770 431 276 14 23 451 40 441 1.90e-35 139
Msa1089720 AT4G16900.2 29.187 418 253 12 40 453 54 432 2.19e-35 140
Msa1089720 AT1G56520.4 28.770 431 276 14 23 451 40 441 3.01e-35 140
Msa1089720 AT1G56520.1 28.770 431 276 14 23 451 40 441 4.13e-35 139
Msa1089720 AT1G56520.2 28.770 431 276 14 23 451 40 441 4.20e-35 139
Msa1089720 AT4G19520.1 29.825 456 258 13 6 453 16 417 5.73e-35 139
Msa1089720 AT4G19520.5 29.825 456 258 13 6 453 16 417 5.75e-35 139
Msa1089720 AT4G19520.3 29.825 456 258 13 6 453 16 417 6.18e-35 139
Msa1089720 AT4G09430.1 30.000 480 267 19 2 453 5 443 6.63e-35 137
Msa1089720 AT5G38850.1 28.798 441 259 16 23 451 36 433 7.03e-35 139
Msa1089720 AT4G19520.2 29.825 456 258 13 6 453 16 417 7.54e-35 139
Msa1089720 AT4G19520.4 29.825 456 258 13 6 453 16 417 7.54e-35 139
Msa1089720 AT1G31540.3 27.140 479 295 14 1 454 1 450 2.33e-34 137
Msa1089720 AT1G31540.1 27.140 479 295 14 1 454 1 450 2.33e-34 137
Msa1089720 AT1G63860.1 29.345 443 252 17 23 460 41 427 2.57e-34 137
Msa1089720 AT1G63860.6 29.345 443 252 17 23 460 41 427 2.62e-34 137
Msa1089720 AT1G63860.2 29.345 443 252 17 23 460 41 427 3.66e-34 137
Msa1089720 AT4G16990.1 30.534 393 236 13 24 412 37 396 3.80e-34 136
Msa1089720 AT5G38340.3 28.217 443 268 17 23 451 84 490 3.84e-34 137
Msa1089720 AT5G38340.1 28.217 443 268 17 23 451 84 490 3.84e-34 137
Msa1089720 AT4G16860.2 31.295 278 154 6 186 453 29 279 3.90e-34 137
Msa1089720 AT4G16990.6 30.534 393 236 13 24 412 37 396 4.04e-34 136
Msa1089720 AT4G16990.11 30.534 393 236 13 24 412 37 396 4.04e-34 136
Msa1089720 AT4G16990.8 30.534 393 236 13 24 412 104 463 4.28e-34 136
Msa1089720 AT2G14080.1 29.638 442 262 14 23 451 83 488 4.50e-34 136
Msa1089720 AT5G45050.2 27.553 421 238 12 36 453 40 396 4.52e-34 137
Msa1089720 AT1G63860.4 29.345 443 252 17 23 460 41 427 4.61e-34 136
Msa1089720 AT1G63860.5 29.345 443 252 17 23 460 41 427 4.61e-34 136
Msa1089720 AT1G63860.3 29.345 443 252 17 23 460 41 427 4.61e-34 136
Msa1089720 AT1G31540.2 27.140 479 295 14 1 454 1 450 4.66e-34 136
Msa1089720 AT5G45050.1 27.553 421 238 12 36 453 40 396 5.28e-34 136
Msa1089720 AT1G63740.2 28.365 416 261 13 9 416 54 440 5.95e-34 136
Msa1089720 AT5G45050.3 27.553 421 238 12 36 453 40 396 6.39e-34 136
Msa1089720 AT4G16990.12 30.534 393 236 13 24 412 37 396 6.48e-34 135
Msa1089720 AT4G16990.7 30.534 393 236 13 24 412 37 396 6.48e-34 135
Msa1089720 AT4G16990.9 30.534 393 236 13 24 412 37 396 7.05e-34 135
Msa1089720 AT4G16990.13 30.534 393 236 13 24 412 37 396 7.32e-34 135
Msa1089720 AT4G16990.2 30.534 393 236 13 24 412 37 396 7.32e-34 135
Msa1089720 AT4G16990.17 30.534 393 236 13 24 412 37 396 7.51e-34 135
Msa1089720 AT4G16990.10 30.534 393 236 13 24 412 37 396 7.51e-34 135
Msa1089720 AT3G04210.2 27.685 419 259 14 23 429 93 479 7.65e-34 134
Msa1089720 AT3G04210.1 27.685 419 259 14 23 429 93 479 7.65e-34 134
Msa1089720 AT1G63730.1 29.323 399 249 12 23 416 40 410 1.33e-33 135
Msa1089720 AT1G63750.3 29.330 433 272 12 23 451 45 447 1.41e-33 135
Msa1089720 AT5G22690.1 29.295 454 255 20 24 453 38 449 2.25e-33 134
Msa1089720 AT1G72860.3 27.883 477 289 16 1 453 1 446 2.50e-33 134
Msa1089720 AT5G22690.2 29.295 454 255 20 24 453 38 449 2.54e-33 134
Msa1089720 AT1G72860.1 27.883 477 289 16 1 453 1 446 2.76e-33 134
Msa1089720 AT1G72860.2 27.883 477 289 16 1 453 1 446 2.87e-33 134
Msa1089720 AT5G22690.4 29.295 454 255 20 24 453 38 449 3.03e-33 134
Msa1089720 AT1G63740.1 28.643 398 247 13 27 416 1 369 3.44e-33 134
Msa1089720 AT5G22690.3 29.295 454 255 20 24 453 38 449 3.54e-33 134
Msa1089720 AT1G27180.7 32.601 273 166 5 185 454 27 284 7.42e-33 133
Msa1089720 AT1G27180.6 32.601 273 166 5 185 454 27 284 7.42e-33 133
Msa1089720 AT1G27180.4 32.601 273 166 5 185 454 27 284 7.42e-33 133
Msa1089720 AT5G40910.6 34.109 258 148 6 195 451 15 251 8.50e-33 132
Msa1089720 AT5G40910.4 34.109 258 148 6 195 451 15 251 8.50e-33 132
Msa1089720 AT5G45050.4 32.721 272 160 6 185 453 6 257 8.64e-33 132
Msa1089720 AT5G40910.2 34.109 258 148 6 195 451 15 251 8.65e-33 132
Msa1089720 AT5G40910.3 34.109 258 148 6 195 451 15 251 8.65e-33 132
Msa1089720 AT5G40910.5 34.109 258 148 6 195 451 15 251 8.65e-33 132
Msa1089720 AT5G40910.7 34.109 258 148 6 195 451 15 251 8.65e-33 132
Msa1089720 AT5G40910.8 34.109 258 148 6 195 451 15 251 8.65e-33 132
Msa1089720 AT1G69550.1 29.978 447 253 21 23 451 107 511 2.18e-32 131
Msa1089720 AT4G16890.4 32.734 278 157 7 181 454 43 294 2.69e-32 131
Msa1089720 AT4G19510.3 31.435 439 252 18 23 451 84 483 1.23e-31 129
Msa1089720 AT5G45260.1 33.333 258 150 4 197 453 167 403 1.51e-31 129
Msa1089720 AT4G19510.10 31.207 439 253 18 23 451 44 443 1.55e-31 129
Msa1089720 AT5G45260.2 33.333 258 150 4 197 453 167 403 1.64e-31 129
Msa1089720 AT5G45260.3 33.333 258 150 4 197 453 167 403 1.64e-31 129
Msa1089720 AT4G19510.2 31.207 439 253 18 23 451 44 443 1.86e-31 129
Msa1089720 AT4G19510.8 31.435 439 252 18 23 451 84 483 2.22e-31 128
Msa1089720 AT4G19510.1 31.435 439 252 18 23 451 84 483 2.22e-31 128
Msa1089720 AT4G19510.5 31.435 439 252 18 23 451 84 483 2.23e-31 128
Msa1089720 AT4G19510.4 31.435 439 252 18 23 451 84 483 2.23e-31 128
Msa1089720 AT4G19510.7 31.435 439 252 18 23 451 84 483 2.23e-31 128
Msa1089720 AT3G25510.2 34.510 255 140 6 204 451 21 255 6.02e-31 127
Msa1089720 AT3G25510.1 34.510 255 140 6 204 451 21 255 6.02e-31 127
Msa1089720 AT4G19500.1 31.429 420 224 17 40 443 53 424 7.24e-31 127
Msa1089720 AT4G19500.1 28.309 272 160 6 192 456 748 991 7.70e-24 105
Msa1089720 AT5G17880.1 28.261 460 268 18 23 450 44 473 1.39e-30 126
Msa1089720 AT5G41740.3 33.333 255 142 7 204 451 47 280 1.41e-30 126
Msa1089720 AT5G17880.2 27.948 458 272 17 23 450 44 473 1.67e-30 126
Msa1089720 AT5G38350.1 32.685 257 144 7 204 451 48 284 2.22e-30 125
Msa1089720 AT4G36140.1 28.706 425 233 14 42 453 470 837 2.99e-30 125
Msa1089720 AT4G36140.1 27.401 354 193 11 40 348 92 426 3.03e-21 98.2
Msa1089720 AT5G46450.3 26.722 479 273 19 11 453 12 448 3.43e-30 125
Msa1089720 AT5G46450.1 26.722 479 273 19 11 453 12 448 3.58e-30 125
Msa1089720 AT4G36140.2 28.706 425 233 14 42 453 285 652 4.05e-30 125
Msa1089720 AT4G36140.2 40.000 145 78 3 204 348 106 241 2.82e-17 85.5
Msa1089720 AT2G14080.2 33.074 257 142 7 204 451 120 355 7.82e-30 124
Msa1089720 AT1G72950.1 27.642 369 213 10 1 351 1 333 8.05e-30 120
Msa1089720 AT1G72840.4 35.918 245 128 8 215 453 59 280 9.88e-30 123
Msa1089720 AT1G72900.1 25.867 375 212 10 1 351 1 333 1.49e-29 119
Msa1089720 AT3G51570.1 28.009 432 248 11 48 450 68 465 1.54e-29 123
Msa1089720 AT3G51570.2 28.009 432 248 11 48 450 68 465 1.63e-29 123
Msa1089720 AT5G46520.1 26.947 475 294 15 1 451 1 446 2.48e-29 122
Msa1089720 AT3G51560.1 33.209 268 124 9 205 453 183 414 4.85e-29 121
Msa1089720 AT4G36150.1 27.133 457 272 14 23 451 46 469 7.15e-29 121
Msa1089720 AT5G40060.1 33.457 269 148 9 195 451 5 254 7.99e-29 120
Msa1089720 AT5G17890.1 26.606 436 264 13 23 455 44 426 1.01e-28 120
Msa1089720 AT5G40060.2 33.457 269 148 9 195 451 5 254 1.19e-28 120
Msa1089720 AT5G46520.2 27.952 415 260 13 47 451 99 484 3.01e-28 119
Msa1089720 AT5G46510.1 26.887 424 274 13 38 451 48 445 8.67e-28 117
Msa1089720 AT5G46510.2 26.887 424 274 13 38 451 48 445 1.02e-27 117
Msa1089720 AT1G17610.1 26.649 379 233 10 40 415 55 391 1.29e-27 114
Msa1089720 AT1G17610.2 26.649 379 233 10 40 415 55 391 1.29e-27 114
Msa1089720 AT5G44870.1 32.794 247 150 5 205 451 279 509 1.93e-27 116
Msa1089720 AT4G09420.1 26.503 449 255 13 12 416 12 429 2.04e-27 114
Msa1089720 AT5G44870.2 32.794 247 150 5 205 451 15 245 2.32e-27 116
Msa1089720 AT1G72890.1 30.172 348 199 14 14 351 58 371 3.52e-27 113
Msa1089720 AT1G66090.1 27.750 400 229 15 23 403 53 411 3.64e-27 113
Msa1089720 AT5G46470.1 26.773 437 285 17 24 453 42 450 6.28e-27 115
Msa1089720 AT5G45250.1 28.770 431 255 15 44 450 61 463 6.79e-27 115
Msa1089720 AT4G09360.1 33.471 242 126 8 215 453 33 242 1.36e-26 114
Msa1089720 AT1G65850.3 32.171 258 145 8 204 451 120 357 1.97e-26 113
Msa1089720 AT5G38340.2 30.739 257 149 7 204 451 48 284 2.14e-26 113
Msa1089720 AT1G72890.2 29.781 366 203 15 14 351 58 397 2.56e-26 111
Msa1089720 AT5G45210.3 26.829 410 255 11 49 453 82 451 2.80e-26 112
Msa1089720 AT5G46490.1 27.968 379 209 14 1 349 1 345 2.88e-26 109
Msa1089720 AT5G45210.2 26.764 411 254 11 49 453 82 451 5.92e-26 111
Msa1089720 AT5G45210.1 26.829 410 255 11 49 453 54 423 6.24e-26 111
Msa1089720 AT5G45210.4 26.764 411 254 11 49 453 82 451 6.82e-26 111
Msa1089720 AT1G56540.2 31.048 248 156 5 204 451 47 279 7.21e-26 112
Msa1089720 AT5G45210.5 26.829 410 255 11 49 453 73 442 7.79e-26 111
Msa1089720 AT5G45230.1 28.233 464 264 17 23 451 38 467 1.17e-25 111
Msa1089720 AT5G45200.3 25.918 463 272 16 24 451 47 473 1.21e-25 111
Msa1089720 AT5G45200.1 25.918 463 272 16 24 451 47 473 1.42e-25 111
Msa1089720 AT1G56520.3 31.325 249 154 6 204 451 47 279 5.51e-25 108
Msa1089720 AT4G12020.5 27.737 411 243 18 45 451 639 999 1.90e-24 107
Msa1089720 AT4G12020.7 27.737 411 243 18 45 451 706 1066 1.95e-24 107
Msa1089720 AT4G12020.1 27.737 411 243 18 45 451 706 1066 2.12e-24 107
Msa1089720 AT4G12020.9 27.737 411 243 18 45 451 706 1066 2.12e-24 107
Msa1089720 AT5G45060.2 27.880 434 267 15 43 450 58 471 2.19e-24 107
Msa1089720 AT5G45060.1 27.880 434 267 15 43 450 58 471 2.19e-24 107
Msa1089720 AT4G12020.4 27.737 411 243 18 45 451 706 1066 2.28e-24 107
Msa1089720 AT1G63750.1 31.474 251 153 5 203 451 47 280 2.36e-24 107
Msa1089720 AT1G63750.2 31.474 251 153 5 203 451 47 280 2.36e-24 107
Msa1089720 AT4G12020.6 27.737 411 243 18 45 451 706 1066 2.60e-24 107
Msa1089720 AT4G12020.8 27.737 411 243 18 45 451 706 1066 2.60e-24 107
Msa1089720 AT4G12020.10 27.737 411 243 18 45 451 706 1066 2.63e-24 107
Msa1089720 AT4G12020.2 27.737 411 243 18 45 451 706 1066 2.69e-24 107
Msa1089720 AT4G12020.3 27.737 411 243 18 45 451 706 1066 3.16e-24 107
Msa1089720 AT5G40090.1 30.769 221 132 3 196 416 197 396 3.90e-24 105
Msa1089720 AT4G12020.11 27.737 411 243 18 45 451 706 1066 4.15e-24 106
Msa1089720 AT1G72850.1 28.972 428 249 15 1 416 1 385 5.02e-24 104
Msa1089720 AT1G72910.1 25.199 377 209 13 1 351 1 330 6.24e-24 103
Msa1089720 AT5G51630.3 40.000 165 95 3 288 451 229 390 8.88e-24 105
Msa1089720 AT5G46450.2 26.160 474 259 20 11 453 12 425 1.05e-23 105
Msa1089720 AT4G19500.2 26.686 341 194 9 127 456 173 468 1.10e-23 105
Msa1089720 AT1G17615.1 26.627 338 209 10 21 351 40 345 1.33e-23 102
Msa1089720 AT2G17050.1 30.709 254 139 6 205 453 49 270 1.53e-23 105
Msa1089720 AT2G17050.2 30.709 254 139 6 205 453 49 270 1.80e-23 104
Msa1089720 AT2G17050.3 30.709 254 139 6 205 453 49 270 2.06e-23 104
Msa1089720 AT1G72940.1 27.177 379 198 14 1 351 1 329 2.12e-23 101
Msa1089720 AT4G16990.16 31.897 232 135 5 185 412 26 238 2.53e-23 103
Msa1089720 AT4G16990.18 31.897 232 135 5 185 412 26 238 2.53e-23 103
Msa1089720 AT4G16990.4 31.897 232 135 5 185 412 26 238 3.56e-23 103
Msa1089720 AT4G16990.14 31.897 232 135 5 185 412 26 238 3.56e-23 103
Msa1089720 AT4G16990.15 31.897 232 135 5 185 412 26 238 3.56e-23 103
Msa1089720 AT4G16990.19 31.897 232 135 5 185 412 26 238 3.56e-23 103
Msa1089720 AT4G16990.3 31.897 232 135 5 185 412 26 238 4.42e-23 102
Msa1089720 AT4G16990.5 31.897 232 135 5 185 412 26 238 4.58e-23 102
Msa1089720 AT4G19510.6 29.385 439 234 18 23 451 84 456 4.54e-22 100
Msa1089720 AT4G19510.9 29.157 439 235 18 23 451 84 456 5.56e-22 100
Msa1089720 AT2G16870.3 30.556 180 116 4 289 463 9 184 1.64e-19 92.4
Msa1089720 AT2G16870.2 30.556 180 116 4 289 463 9 184 1.64e-19 92.4
Msa1089720 AT5G45200.2 28.807 243 158 5 210 451 1 229 2.54e-19 92.0
Msa1089720 AT1G72870.1 31.308 214 121 5 205 416 277 466 3.50e-19 90.5
Msa1089720 AT2G17060.2 25.431 464 277 16 23 451 45 474 1.32e-18 89.7
Msa1089720 AT2G17060.1 24.138 464 283 16 23 451 45 474 1.46e-18 89.7
Msa1089720 AT4G19530.1 27.848 474 246 22 24 450 43 467 5.11e-17 84.7
Msa1089720 AT4G19530.2 27.848 474 246 22 24 450 43 467 5.33e-17 84.7
Msa1089720 AT5G48780.1 29.518 166 99 3 196 360 458 606 1.89e-15 79.3
Msa1089720 AT5G48780.2 29.518 166 99 3 196 360 428 576 1.96e-15 79.3
Msa1089720 AT3G25505.1 34.868 152 92 4 302 451 118 264 7.84e-14 74.3

Find 101 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGCAATTAGTTACTAATTC+TGG 0.113762 7_3:-3329296 Msa1089720:CDS
ACTTGACCATGTTGATAAAT+TGG 0.177194 7_3:-3329531 Msa1089720:CDS
TCAAAATCTCCTCTCCTAAT+AGG 0.190429 7_3:-3329960 Msa1089720:CDS
GTTCCCAATTTGTTCATAAA+TGG 0.191884 7_3:+3329893 None:intergenic
AAAGCCATTTATGAACAAAT+TGG 0.208534 7_3:-3329897 Msa1089720:CDS
ACAAATACTCAAAGAGATTT+TGG 0.213462 7_3:-3329329 Msa1089720:CDS
AAAATCTAATGCAGCATATT+TGG 0.219822 7_3:+3330287 None:intergenic
CTCCTCTCCTAATAGGGATA+TGG 0.227115 7_3:-3329953 Msa1089720:CDS
GTTCTTTCACGCTGTATATA+TGG 0.260405 7_3:+3329405 None:intergenic
GATATAGCATGTTTCTTTGT+TGG 0.280717 7_3:-3329098 Msa1089720:CDS
ACTCTTCCTGCTTCAGTTGT+AGG 0.282627 7_3:+3329596 None:intergenic
ATCTAATTTCATTACTCATT+TGG 0.309914 7_3:+3330252 None:intergenic
CCTCTTGCTCTGAAAGAACT+TGG 0.312696 7_3:-3329266 Msa1089720:CDS
GAGTGCTACCGTACCGAAAA+TGG 0.330137 7_3:-3330477 Msa1089720:CDS
GAGAATGTATGCTCTCTATA+TGG 0.336917 7_3:+3330015 None:intergenic
CAAAATCTCCTCTCCTAATA+GGG 0.348838 7_3:-3329959 Msa1089720:CDS
ATATAGCATGTTTCTTTGTT+GGG 0.351360 7_3:-3329097 Msa1089720:CDS
ATATTCCGGCGACATTTCTT+CGG 0.351819 7_3:+3330425 None:intergenic
GAGTGGTGTATTGTGTTGTT+TGG 0.353451 7_3:+3329055 None:intergenic
AAAGGATTTGTGTGGAAATC+AGG 0.357306 7_3:-3329501 Msa1089720:CDS
GGCAATTAGTTACTAATTCT+GGG 0.358131 7_3:-3329295 Msa1089720:CDS
GTAGCTCTTTCTCTTTGTAT+TGG 0.369944 7_3:+3330745 None:intergenic
TCAATGACATCAGCCGGGTT+TGG 0.378004 7_3:-3329848 Msa1089720:CDS
TATTCCGGCGACATTTCTTC+GGG 0.378655 7_3:+3330426 None:intergenic
TCCTCTCCTAATAGGGATAT+GGG 0.380343 7_3:-3329952 Msa1089720:CDS
CATGAACTTGTCTTCATCTT+CGG 0.387947 7_3:+3330341 None:intergenic
CTCCATTTCGTTTCCAAACC+CGG 0.389205 7_3:+3329835 None:intergenic
AACTCATAATTTAATTCAGT+TGG 0.399145 7_3:+3329768 None:intergenic
TAGATGGTATCTTCAAGAAT+TGG 0.401057 7_3:-3330511 Msa1089720:CDS
TTACAAGGCTCTTGTCTTCA+AGG 0.402442 7_3:+3329019 None:intergenic
TTGTTTGGAGTACATCCTTT+TGG 0.405072 7_3:+3329070 None:intergenic
ACTCACAAACACAATATATA+GGG 0.405760 7_3:+3328873 None:intergenic
AATTTGTTCATAAATGGCTT+TGG 0.407708 7_3:+3329899 None:intergenic
TAGAACACAGGTAAAACAAT+AGG 0.409411 7_3:+3330453 None:intergenic
CACTCACAAACACAATATAT+AGG 0.410982 7_3:+3328872 None:intergenic
AAGCCATTTATGAACAAATT+GGG 0.412236 7_3:-3329896 Msa1089720:CDS
TTAATAGTTGAATCACATCT+TGG 0.423548 7_3:+3329988 None:intergenic
AAAGAGCTACGACGTGTACT+TGG 0.429449 7_3:-3330732 Msa1089720:CDS
GCCTCTCCATACATATATTC+CGG 0.440922 7_3:+3330411 None:intergenic
CTTGTCTTCATCTTCGGAAG+AGG 0.447063 7_3:+3330347 None:intergenic
TGTGGAAATCAGGACTGGTT+TGG 0.452231 7_3:-3329491 Msa1089720:CDS
TAATAGTTGAATCACATCTT+GGG 0.453849 7_3:+3329989 None:intergenic
AAATCTCTTTGAGTATTTGT+TGG 0.455981 7_3:+3329332 None:intergenic
CTTAATTATACCTCTTGCCA+TGG 0.458023 7_3:+3328951 None:intergenic
AGCCGGGTTTGGAAACGAAA+TGG 0.469143 7_3:-3329837 Msa1089720:CDS
TAGAAGAAAGAAGTTGCTCT+TGG 0.471854 7_3:+3329799 None:intergenic
TTCTGGGACGGTGAGAGGAT+TGG 0.472250 7_3:-3330633 Msa1089720:CDS
GCTTCTTGTAGTCGTGGAGC+TGG 0.479776 7_3:+3329173 None:intergenic
AGAAACACTTCGACATAAAA+CGG 0.482345 7_3:-3329564 Msa1089720:CDS
ATATGTATTCTAGTCCTAGA+TGG 0.485036 7_3:-3330527 Msa1089720:CDS
TGATAAATTGGAGCAGCTAA+AGG 0.485787 7_3:-3329519 Msa1089720:CDS
TGAAGACAAGTTCATGAGTT+GGG 0.488521 7_3:-3330334 Msa1089720:CDS
GTTTCCTCAATGACATCAGC+CGG 0.493379 7_3:-3329854 Msa1089720:CDS
TTCATAAATGGCTTTGGCGA+TGG 0.497124 7_3:+3329905 None:intergenic
CTCTTGCTCTGAAAGAACTT+GGG 0.503265 7_3:-3329265 Msa1089720:CDS
GTAGGTATCGTTTCGAGTTG+AGG 0.504620 7_3:+3329614 None:intergenic
CAAAGAAACATGCTATATCA+AGG 0.507356 7_3:+3329102 None:intergenic
TTGTAGTCGTGGAGCTGGAA+TGG 0.507613 7_3:+3329178 None:intergenic
AATCAGGACTGGTTTGGTCC+AGG 0.507726 7_3:-3329485 Msa1089720:CDS
TAATCATCATGACAACAGAT+AGG 0.509972 7_3:-3329454 Msa1089720:CDS
AATTCTTGAAGATACCATCT+AGG 0.510139 7_3:+3330513 None:intergenic
CTCTTTGAGTATTTGTTGGT+AGG 0.510714 7_3:+3329336 None:intergenic
ATGTATGGAGAGGCTTTACA+TGG 0.524444 7_3:-3330402 Msa1089720:CDS
ATGTCGCCGGAATATATGTA+TGG 0.525307 7_3:-3330417 Msa1089720:CDS
ATCAAGTCAAAAGACCGATC+AGG 0.535765 7_3:-3328923 Msa1089720:three_prime_UTR
CCAAGTTCTTTCAGAGCAAG+AGG 0.536577 7_3:+3329266 None:intergenic
TCTAGAGCTTCTTGTAGTCG+TGG 0.543969 7_3:+3329167 None:intergenic
TCTGGATAGAATCTCAATGA+AGG 0.545144 7_3:-3330376 Msa1089720:CDS
ATGAAGACAAGTTCATGAGT+TGG 0.547434 7_3:-3330335 Msa1089720:CDS
ACGATACCTACAACTGAAGC+AGG 0.547826 7_3:-3329602 Msa1089720:CDS
GCATGTTATGCTACAAGCCA+TGG 0.549423 7_3:-3328968 Msa1089720:three_prime_UTR
ACAGCTCTTACTTCAGAAGC+TGG 0.551106 7_3:-3330666 Msa1089720:intron
TCTTTGTTGGGATGACCAAA+AGG 0.556432 7_3:-3329085 Msa1089720:CDS
ATTTGTGTGGAAATCAGGAC+TGG 0.557093 7_3:-3329496 Msa1089720:CDS
AACAGATAGGCATCTTCTCA+AGG 0.562577 7_3:-3329441 Msa1089720:CDS
AAGGAGACTTATTTGAAGAG+TGG 0.566553 7_3:+3329038 None:intergenic
CCTCTCCTAATAGGGATATG+GGG 0.570767 7_3:-3329951 Msa1089720:CDS
AAGAGCTACGACGTGTACTT+GGG 0.581129 7_3:-3330731 Msa1089720:intron
CTCTCCTAATAGGGATATGG+GGG 0.586967 7_3:-3329950 Msa1089720:CDS
GCTGCTCCAATTTATCAACA+TGG 0.589496 7_3:+3329525 None:intergenic
GACGGTGAGAGGATTGGACG+TGG 0.591785 7_3:-3330627 Msa1089720:CDS
AGGCATCTTCTCAAGGAGCA+TGG 0.593792 7_3:-3329434 Msa1089720:CDS
TTTCCTCAATGACATCAGCC+GGG 0.605245 7_3:-3329853 Msa1089720:CDS
ATGGAAAGGAAGCACTTCAG+TGG 0.606116 7_3:-3329232 Msa1089720:CDS
CATAATACCACTCACCTGAT+CGG 0.608784 7_3:+3328909 None:intergenic
CCCCATATCCCTATTAGGAG+AGG 0.617616 7_3:+3329951 None:intergenic
TTCCGGCGACATTTCTTCGG+GGG 0.618778 7_3:+3330428 None:intergenic
TGTATTGGTAGTAGAAGACA+TGG 0.619431 7_3:+3330760 None:intergenic
TTCTCTATTATACAGGAACA+GGG 0.620828 7_3:-3330102 Msa1089720:intron
ATTCCGGCGACATTTCTTCG+GGG 0.628699 7_3:+3330427 None:intergenic
ATGCTACAAGCCATGGCAAG+AGG 0.631870 7_3:-3328961 Msa1089720:three_prime_UTR
GAGCAGCTAAAGGATTTGTG+TGG 0.632930 7_3:-3329509 Msa1089720:CDS
AAACCCGGCTGATGTCATTG+AGG 0.635186 7_3:+3329850 None:intergenic
CAAAAGACCGATCAGGTGAG+TGG 0.645811 7_3:-3328916 Msa1089720:three_prime_UTR
ATGTATTGTAGGAATTGGAG+AGG 0.653064 7_3:-3329638 Msa1089720:intron
CAGGGTTATACTGATAACAA+AGG 0.659244 7_3:-3330084 Msa1089720:CDS
GCCGGAATATATGTATGGAG+AGG 0.661081 7_3:-3330412 Msa1089720:CDS
CGGGTTTGGAAACGAAATGG+AGG 0.663316 7_3:-3329834 Msa1089720:CDS
AGATCAAGAAATATCAACCT+CGG 0.688236 7_3:-3330604 Msa1089720:CDS
TTCAATCACATTCAGCACCG+AGG 0.692135 7_3:+3330587 None:intergenic
TATGCTCTCTATATGGAACG+AGG 0.718179 7_3:+3330022 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAGATTACTAAATCTTTA+TGG - chr7_3:3329361-3329380 Msa1089720:CDS 15.0%
!! ATTTATTGTATAAAATTGAG+TGG + chr7_3:3329860-3329879 None:intergenic 15.0%
!!! ACTCAATTTTATACAATAAA+TGG - chr7_3:3329859-3329878 Msa1089720:CDS 15.0%
!! ATTAGATTACTAAATCTTTA+TGG - chr7_3:3329361-3329380 Msa1089720:CDS 15.0%
!! ATTTATTGTATAAAATTGAG+TGG + chr7_3:3329860-3329879 None:intergenic 15.0%
!!! ACTCAATTTTATACAATAAA+TGG - chr7_3:3329859-3329878 Msa1089720:CDS 15.0%
!! ATCTAATTTCATTACTCATT+TGG + chr7_3:3329348-3329367 None:intergenic 20.0%
!! AACTCATAATTTAATTCAGT+TGG + chr7_3:3329832-3329851 None:intergenic 20.0%
!! AATATCCATTATTATAGTCT+TGG - chr7_3:3329883-3329902 Msa1089720:CDS 20.0%
!!! TATTTTTATCAATGGTTACA+AGG + chr7_3:3330596-3330615 None:intergenic 20.0%
!!! AAGCTTGTTATTTTTATCAA+TGG + chr7_3:3330604-3330623 None:intergenic 20.0%
!! ATCTAATTTCATTACTCATT+TGG + chr7_3:3329348-3329367 None:intergenic 20.0%
!! AACTCATAATTTAATTCAGT+TGG + chr7_3:3329832-3329851 None:intergenic 20.0%
!! AATATCCATTATTATAGTCT+TGG - chr7_3:3329883-3329902 Msa1089720:CDS 20.0%
!!! TATTTTTATCAATGGTTACA+AGG + chr7_3:3330596-3330615 None:intergenic 20.0%
!!! AAGCTTGTTATTTTTATCAA+TGG + chr7_3:3330604-3330623 None:intergenic 20.0%
! AATATGCGTATTATTTGCTT+TGG - chr7_3:3328900-3328919 Msa1089720:three_prime_UTR 25.0%
!! TAAAACAATAGGACCATTTT+CGG + chr7_3:3329136-3329155 None:intergenic 25.0%
! AAAATCTAATGCAGCATATT+TGG + chr7_3:3329313-3329332 None:intergenic 25.0%
!!! GCATTAGATTTTTTACGATA+TGG - chr7_3:3329321-3329340 Msa1089720:CDS 25.0%
!! ATTTTCACTTATGTACATGT+TGG - chr7_3:3329442-3329461 Msa1089720:CDS 25.0%
! TAATAGTTGAATCACATCTT+GGG + chr7_3:3329611-3329630 None:intergenic 25.0%
! TTAATAGTTGAATCACATCT+TGG + chr7_3:3329612-3329631 None:intergenic 25.0%
!! AATTTGTTCATAAATGGCTT+TGG + chr7_3:3329701-3329720 None:intergenic 25.0%
! AAAGCCATTTATGAACAAAT+TGG - chr7_3:3329700-3329719 Msa1089720:intron 25.0%
! AAGCCATTTATGAACAAATT+GGG - chr7_3:3329701-3329720 Msa1089720:intron 25.0%
! ATACACCAAGACTATAATAA+TGG + chr7_3:3329891-3329910 None:intergenic 25.0%
! GCATTTATATCATGTATTGT+AGG - chr7_3:3329948-3329967 Msa1089720:CDS 25.0%
! ATATCATGTATTGTAGGAAT+TGG - chr7_3:3329954-3329973 Msa1089720:CDS 25.0%
! AAATCTCTTTGAGTATTTGT+TGG + chr7_3:3330268-3330287 None:intergenic 25.0%
!! ACAAATACTCAAAGAGATTT+TGG - chr7_3:3330268-3330287 Msa1089720:CDS 25.0%
! ATATAGCATGTTTCTTTGTT+GGG - chr7_3:3330500-3330519 Msa1089720:CDS 25.0%
! ACTCACAAACACAATATATA+GGG + chr7_3:3330727-3330746 None:intergenic 25.0%
! AATATGCGTATTATTTGCTT+TGG - chr7_3:3328900-3328919 Msa1089720:three_prime_UTR 25.0%
!! TAAAACAATAGGACCATTTT+CGG + chr7_3:3329136-3329155 None:intergenic 25.0%
! AAAATCTAATGCAGCATATT+TGG + chr7_3:3329313-3329332 None:intergenic 25.0%
!!! GCATTAGATTTTTTACGATA+TGG - chr7_3:3329321-3329340 Msa1089720:CDS 25.0%
!! ATTTTCACTTATGTACATGT+TGG - chr7_3:3329442-3329461 Msa1089720:CDS 25.0%
! TAATAGTTGAATCACATCTT+GGG + chr7_3:3329611-3329630 None:intergenic 25.0%
! TTAATAGTTGAATCACATCT+TGG + chr7_3:3329612-3329631 None:intergenic 25.0%
!! AATTTGTTCATAAATGGCTT+TGG + chr7_3:3329701-3329720 None:intergenic 25.0%
! AAAGCCATTTATGAACAAAT+TGG - chr7_3:3329700-3329719 Msa1089720:intron 25.0%
! AAGCCATTTATGAACAAATT+GGG - chr7_3:3329701-3329720 Msa1089720:intron 25.0%
! ATACACCAAGACTATAATAA+TGG + chr7_3:3329891-3329910 None:intergenic 25.0%
! GCATTTATATCATGTATTGT+AGG - chr7_3:3329948-3329967 Msa1089720:CDS 25.0%
! ATATCATGTATTGTAGGAAT+TGG - chr7_3:3329954-3329973 Msa1089720:CDS 25.0%
! AAATCTCTTTGAGTATTTGT+TGG + chr7_3:3330268-3330287 None:intergenic 25.0%
!! ACAAATACTCAAAGAGATTT+TGG - chr7_3:3330268-3330287 Msa1089720:CDS 25.0%
! ATATAGCATGTTTCTTTGTT+GGG - chr7_3:3330500-3330519 Msa1089720:CDS 25.0%
! ACTCACAAACACAATATATA+GGG + chr7_3:3330727-3330746 None:intergenic 25.0%
AGATCAAGAAATATCAACCT+CGG - chr7_3:3328993-3329012 Msa1089720:three_prime_UTR 30.0%
ATATGTATTCTAGTCCTAGA+TGG - chr7_3:3329070-3329089 Msa1089720:CDS 30.0%
AATTCTTGAAGATACCATCT+AGG + chr7_3:3329087-3329106 None:intergenic 30.0%
TAGATGGTATCTTCAAGAAT+TGG - chr7_3:3329086-3329105 Msa1089720:CDS 30.0%
TAGAACACAGGTAAAACAAT+AGG + chr7_3:3329147-3329166 None:intergenic 30.0%
! CTCTTGTTTCTCTATTATAC+AGG - chr7_3:3329488-3329507 Msa1089720:CDS 30.0%
TTTCTCTATTATACAGGAAC+AGG - chr7_3:3329494-3329513 Msa1089720:CDS 30.0%
TTCTCTATTATACAGGAACA+GGG - chr7_3:3329495-3329514 Msa1089720:CDS 30.0%
! GTTCCCAATTTGTTCATAAA+TGG + chr7_3:3329707-3329726 None:intergenic 30.0%
!!! TTGGGAACTTTTTTGAGTAT+AGG - chr7_3:3329719-3329738 Msa1089720:intron 30.0%
AGAAACACTTCGACATAAAA+CGG - chr7_3:3330033-3330052 Msa1089720:CDS 30.0%
! ACTTGACCATGTTGATAAAT+TGG - chr7_3:3330066-3330085 Msa1089720:CDS 30.0%
TAATCATCATGACAACAGAT+AGG - chr7_3:3330143-3330162 Msa1089720:intron 30.0%
! AATCTCTTGCACTTTTGAAT+TGG - chr7_3:3330227-3330246 Msa1089720:intron 30.0%
! ATCTCTTGCACTTTTGAATT+GGG - chr7_3:3330228-3330247 Msa1089720:intron 30.0%
AGGCAATTAGTTACTAATTC+TGG - chr7_3:3330301-3330320 Msa1089720:CDS 30.0%
GGCAATTAGTTACTAATTCT+GGG - chr7_3:3330302-3330321 Msa1089720:CDS 30.0%
!!! GAACTTGGGTTATTTTTGAA+TGG - chr7_3:3330346-3330365 Msa1089720:CDS 30.0%
!!! TGGGTTATTTTTGAATGGAA+AGG - chr7_3:3330351-3330370 Msa1089720:CDS 30.0%
CAAAGAAACATGCTATATCA+AGG + chr7_3:3330498-3330517 None:intergenic 30.0%
GATATAGCATGTTTCTTTGT+TGG - chr7_3:3330499-3330518 Msa1089720:CDS 30.0%
CACTCACAAACACAATATAT+AGG + chr7_3:3330728-3330747 None:intergenic 30.0%
AGATCAAGAAATATCAACCT+CGG - chr7_3:3328993-3329012 Msa1089720:three_prime_UTR 30.0%
ATATGTATTCTAGTCCTAGA+TGG - chr7_3:3329070-3329089 Msa1089720:CDS 30.0%
AATTCTTGAAGATACCATCT+AGG + chr7_3:3329087-3329106 None:intergenic 30.0%
TAGATGGTATCTTCAAGAAT+TGG - chr7_3:3329086-3329105 Msa1089720:CDS 30.0%
TAGAACACAGGTAAAACAAT+AGG + chr7_3:3329147-3329166 None:intergenic 30.0%
! CTCTTGTTTCTCTATTATAC+AGG - chr7_3:3329488-3329507 Msa1089720:CDS 30.0%
TTTCTCTATTATACAGGAAC+AGG - chr7_3:3329494-3329513 Msa1089720:CDS 30.0%
TTCTCTATTATACAGGAACA+GGG - chr7_3:3329495-3329514 Msa1089720:CDS 30.0%
! GTTCCCAATTTGTTCATAAA+TGG + chr7_3:3329707-3329726 None:intergenic 30.0%
!!! TTGGGAACTTTTTTGAGTAT+AGG - chr7_3:3329719-3329738 Msa1089720:intron 30.0%
AGAAACACTTCGACATAAAA+CGG - chr7_3:3330033-3330052 Msa1089720:CDS 30.0%
! ACTTGACCATGTTGATAAAT+TGG - chr7_3:3330066-3330085 Msa1089720:CDS 30.0%
TAATCATCATGACAACAGAT+AGG - chr7_3:3330143-3330162 Msa1089720:intron 30.0%
! AATCTCTTGCACTTTTGAAT+TGG - chr7_3:3330227-3330246 Msa1089720:intron 30.0%
! ATCTCTTGCACTTTTGAATT+GGG - chr7_3:3330228-3330247 Msa1089720:intron 30.0%
AGGCAATTAGTTACTAATTC+TGG - chr7_3:3330301-3330320 Msa1089720:CDS 30.0%
GGCAATTAGTTACTAATTCT+GGG - chr7_3:3330302-3330321 Msa1089720:CDS 30.0%
!!! GAACTTGGGTTATTTTTGAA+TGG - chr7_3:3330346-3330365 Msa1089720:CDS 30.0%
!!! TGGGTTATTTTTGAATGGAA+AGG - chr7_3:3330351-3330370 Msa1089720:CDS 30.0%
CAAAGAAACATGCTATATCA+AGG + chr7_3:3330498-3330517 None:intergenic 30.0%
GATATAGCATGTTTCTTTGT+TGG - chr7_3:3330499-3330518 Msa1089720:CDS 30.0%
CACTCACAAACACAATATAT+AGG + chr7_3:3330728-3330747 None:intergenic 30.0%
GTAGCTCTTTCTCTTTGTAT+TGG + chr7_3:3328855-3328874 None:intergenic 35.0%
TCTGGATAGAATCTCAATGA+AGG - chr7_3:3329221-3329240 Msa1089720:CDS 35.0%
CATGAACTTGTCTTCATCTT+CGG + chr7_3:3329259-3329278 None:intergenic 35.0%
ATGAAGACAAGTTCATGAGT+TGG - chr7_3:3329262-3329281 Msa1089720:CDS 35.0%
TGAAGACAAGTTCATGAGTT+GGG - chr7_3:3329263-3329282 Msa1089720:CDS 35.0%
CAGGGTTATACTGATAACAA+AGG - chr7_3:3329513-3329532 Msa1089720:CDS 35.0%
GAGAATGTATGCTCTCTATA+TGG + chr7_3:3329585-3329604 None:intergenic 35.0%
TCAAAATCTCCTCTCCTAAT+AGG - chr7_3:3329637-3329656 Msa1089720:intron 35.0%
CAAAATCTCCTCTCCTAATA+GGG - chr7_3:3329638-3329657 Msa1089720:intron 35.0%
TAGAAGAAAGAAGTTGCTCT+TGG + chr7_3:3329801-3329820 None:intergenic 35.0%
ATGTATTGTAGGAATTGGAG+AGG - chr7_3:3329959-3329978 Msa1089720:CDS 35.0%
TGATAAATTGGAGCAGCTAA+AGG - chr7_3:3330078-3330097 Msa1089720:CDS 35.0%
AAAGGATTTGTGTGGAAATC+AGG - chr7_3:3330096-3330115 Msa1089720:intron 35.0%
!! ATGATGATTATTTTGCTGCC+TGG + chr7_3:3330133-3330152 None:intergenic 35.0%
GTTCTTTCACGCTGTATATA+TGG + chr7_3:3330195-3330214 None:intergenic 35.0%
! TCTCTTGCACTTTTGAATTG+GGG - chr7_3:3330229-3330248 Msa1089720:intron 35.0%
! CTCTTTGAGTATTTGTTGGT+AGG + chr7_3:3330264-3330283 None:intergenic 35.0%
!! GAGATTTTGGTGAACTTTCT+AGG - chr7_3:3330281-3330300 Msa1089720:CDS 35.0%
!! TTGTTTGGAGTACATCCTTT+TGG + chr7_3:3330530-3330549 None:intergenic 35.0%
AAGGAGACTTATTTGAAGAG+TGG + chr7_3:3330562-3330581 None:intergenic 35.0%
CTTAATTATACCTCTTGCCA+TGG + chr7_3:3330649-3330668 None:intergenic 35.0%
! TGTGTTTGTGAGTGATTTTG+AGG - chr7_3:3330734-3330753 Msa1089720:CDS 35.0%
! GTATTGGTAGTAGAAGACAT+TGG + chr7_3:3328839-3328858 None:intergenic 35.0%
GTAGCTCTTTCTCTTTGTAT+TGG + chr7_3:3328855-3328874 None:intergenic 35.0%
TCTGGATAGAATCTCAATGA+AGG - chr7_3:3329221-3329240 Msa1089720:CDS 35.0%
CATGAACTTGTCTTCATCTT+CGG + chr7_3:3329259-3329278 None:intergenic 35.0%
ATGAAGACAAGTTCATGAGT+TGG - chr7_3:3329262-3329281 Msa1089720:CDS 35.0%
TGAAGACAAGTTCATGAGTT+GGG - chr7_3:3329263-3329282 Msa1089720:CDS 35.0%
CAGGGTTATACTGATAACAA+AGG - chr7_3:3329513-3329532 Msa1089720:CDS 35.0%
GAGAATGTATGCTCTCTATA+TGG + chr7_3:3329585-3329604 None:intergenic 35.0%
TCAAAATCTCCTCTCCTAAT+AGG - chr7_3:3329637-3329656 Msa1089720:intron 35.0%
CAAAATCTCCTCTCCTAATA+GGG - chr7_3:3329638-3329657 Msa1089720:intron 35.0%
TAGAAGAAAGAAGTTGCTCT+TGG + chr7_3:3329801-3329820 None:intergenic 35.0%
ATGTATTGTAGGAATTGGAG+AGG - chr7_3:3329959-3329978 Msa1089720:CDS 35.0%
TGATAAATTGGAGCAGCTAA+AGG - chr7_3:3330078-3330097 Msa1089720:CDS 35.0%
AAAGGATTTGTGTGGAAATC+AGG - chr7_3:3330096-3330115 Msa1089720:intron 35.0%
!! ATGATGATTATTTTGCTGCC+TGG + chr7_3:3330133-3330152 None:intergenic 35.0%
GTTCTTTCACGCTGTATATA+TGG + chr7_3:3330195-3330214 None:intergenic 35.0%
! TCTCTTGCACTTTTGAATTG+GGG - chr7_3:3330229-3330248 Msa1089720:intron 35.0%
! CTCTTTGAGTATTTGTTGGT+AGG + chr7_3:3330264-3330283 None:intergenic 35.0%
!! GAGATTTTGGTGAACTTTCT+AGG - chr7_3:3330281-3330300 Msa1089720:CDS 35.0%
!! TTGTTTGGAGTACATCCTTT+TGG + chr7_3:3330530-3330549 None:intergenic 35.0%
AAGGAGACTTATTTGAAGAG+TGG + chr7_3:3330562-3330581 None:intergenic 35.0%
CTTAATTATACCTCTTGCCA+TGG + chr7_3:3330649-3330668 None:intergenic 35.0%
! TGTGTTTGTGAGTGATTTTG+AGG - chr7_3:3330734-3330753 Msa1089720:CDS 35.0%
! AAGCTGGAATCACTGTTTTC+TGG - chr7_3:3328947-3328966 Msa1089720:three_prime_UTR 40.0%
! AGCTGGAATCACTGTTTTCT+GGG - chr7_3:3328948-3328967 Msa1089720:three_prime_UTR 40.0%
! CAATAGGACCATTTTCGGTA+CGG + chr7_3:3329131-3329150 None:intergenic 40.0%
ATATTCCGGCGACATTTCTT+CGG + chr7_3:3329175-3329194 None:intergenic 40.0%
ATGTCGCCGGAATATATGTA+TGG - chr7_3:3329180-3329199 Msa1089720:CDS 40.0%
GCCTCTCCATACATATATTC+CGG + chr7_3:3329189-3329208 None:intergenic 40.0%
ATGTATGGAGAGGCTTTACA+TGG - chr7_3:3329195-3329214 Msa1089720:CDS 40.0%
! AGAGGCTTTACATGGTTTTC+TGG - chr7_3:3329203-3329222 Msa1089720:CDS 40.0%
TATGCTCTCTATATGGAACG+AGG + chr7_3:3329578-3329597 None:intergenic 40.0%
TCCTCTCCTAATAGGGATAT+GGG - chr7_3:3329645-3329664 Msa1089720:intron 40.0%
!! TTCATAAATGGCTTTGGCGA+TGG + chr7_3:3329695-3329714 None:intergenic 40.0%
GCTGCTCCAATTTATCAACA+TGG + chr7_3:3330075-3330094 None:intergenic 40.0%
ATTTGTGTGGAAATCAGGAC+TGG - chr7_3:3330101-3330120 Msa1089720:intron 40.0%
AACAGATAGGCATCTTCTCA+AGG - chr7_3:3330156-3330175 Msa1089720:intron 40.0%
!! CTCTTGCTCTGAAAGAACTT+GGG - chr7_3:3330332-3330351 Msa1089720:CDS 40.0%
TCTTTGTTGGGATGACCAAA+AGG - chr7_3:3330512-3330531 Msa1089720:CDS 40.0%
! GAGTGGTGTATTGTGTTGTT+TGG + chr7_3:3330545-3330564 None:intergenic 40.0%
TTACAAGGCTCTTGTCTTCA+AGG + chr7_3:3330581-3330600 None:intergenic 40.0%
ATCAAGTCAAAAGACCGATC+AGG - chr7_3:3330674-3330693 Msa1089720:intron 40.0%
CATAATACCACTCACCTGAT+CGG + chr7_3:3330691-3330710 None:intergenic 40.0%
! AAGCTGGAATCACTGTTTTC+TGG - chr7_3:3328947-3328966 Msa1089720:three_prime_UTR 40.0%
! AGCTGGAATCACTGTTTTCT+GGG - chr7_3:3328948-3328967 Msa1089720:three_prime_UTR 40.0%
! CAATAGGACCATTTTCGGTA+CGG + chr7_3:3329131-3329150 None:intergenic 40.0%
ATATTCCGGCGACATTTCTT+CGG + chr7_3:3329175-3329194 None:intergenic 40.0%
ATGTCGCCGGAATATATGTA+TGG - chr7_3:3329180-3329199 Msa1089720:CDS 40.0%
GCCTCTCCATACATATATTC+CGG + chr7_3:3329189-3329208 None:intergenic 40.0%
ATGTATGGAGAGGCTTTACA+TGG - chr7_3:3329195-3329214 Msa1089720:CDS 40.0%
! AGAGGCTTTACATGGTTTTC+TGG - chr7_3:3329203-3329222 Msa1089720:CDS 40.0%
TATGCTCTCTATATGGAACG+AGG + chr7_3:3329578-3329597 None:intergenic 40.0%
TCCTCTCCTAATAGGGATAT+GGG - chr7_3:3329645-3329664 Msa1089720:intron 40.0%
!! TTCATAAATGGCTTTGGCGA+TGG + chr7_3:3329695-3329714 None:intergenic 40.0%
GCTGCTCCAATTTATCAACA+TGG + chr7_3:3330075-3330094 None:intergenic 40.0%
ATTTGTGTGGAAATCAGGAC+TGG - chr7_3:3330101-3330120 Msa1089720:intron 40.0%
AACAGATAGGCATCTTCTCA+AGG - chr7_3:3330156-3330175 Msa1089720:intron 40.0%
!! CTCTTGCTCTGAAAGAACTT+GGG - chr7_3:3330332-3330351 Msa1089720:CDS 40.0%
TCTTTGTTGGGATGACCAAA+AGG - chr7_3:3330512-3330531 Msa1089720:CDS 40.0%
! GAGTGGTGTATTGTGTTGTT+TGG + chr7_3:3330545-3330564 None:intergenic 40.0%
TTACAAGGCTCTTGTCTTCA+AGG + chr7_3:3330581-3330600 None:intergenic 40.0%
ATCAAGTCAAAAGACCGATC+AGG - chr7_3:3330674-3330693 Msa1089720:intron 40.0%
CATAATACCACTCACCTGAT+CGG + chr7_3:3330691-3330710 None:intergenic 40.0%
AAAGAGCTACGACGTGTACT+TGG - chr7_3:3328865-3328884 Msa1089720:three_prime_UTR 45.0%
AAGAGCTACGACGTGTACTT+GGG - chr7_3:3328866-3328885 Msa1089720:three_prime_UTR 45.0%
ACAGCTCTTACTTCAGAAGC+TGG - chr7_3:3328931-3328950 Msa1089720:three_prime_UTR 45.0%
!! GGAATCACTGTTTTCTGGGA+CGG - chr7_3:3328952-3328971 Msa1089720:three_prime_UTR 45.0%
TTCAATCACATTCAGCACCG+AGG + chr7_3:3329013-3329032 None:intergenic 45.0%
TATTCCGGCGACATTTCTTC+GGG + chr7_3:3329174-3329193 None:intergenic 45.0%
GCCGGAATATATGTATGGAG+AGG - chr7_3:3329185-3329204 Msa1089720:CDS 45.0%
CTTGTCTTCATCTTCGGAAG+AGG + chr7_3:3329253-3329272 None:intergenic 45.0%
CTCCTCTCCTAATAGGGATA+TGG - chr7_3:3329644-3329663 Msa1089720:intron 45.0%
CCTCTCCTAATAGGGATATG+GGG - chr7_3:3329646-3329665 Msa1089720:intron 45.0%
CTCTCCTAATAGGGATATGG+GGG - chr7_3:3329647-3329666 Msa1089720:intron 45.0%
TCATCCCCCATATCCCTATT+AGG + chr7_3:3329654-3329673 None:intergenic 45.0%
GTTTCCTCAATGACATCAGC+CGG - chr7_3:3329743-3329762 Msa1089720:intron 45.0%
TTTCCTCAATGACATCAGCC+GGG - chr7_3:3329744-3329763 Msa1089720:intron 45.0%
CTCCATTTCGTTTCCAAACC+CGG + chr7_3:3329765-3329784 None:intergenic 45.0%
!! GTAGGTATCGTTTCGAGTTG+AGG + chr7_3:3329986-3330005 None:intergenic 45.0%
ACGATACCTACAACTGAAGC+AGG - chr7_3:3329995-3330014 Msa1089720:CDS 45.0%
ACTCTTCCTGCTTCAGTTGT+AGG + chr7_3:3330004-3330023 None:intergenic 45.0%
GAGCAGCTAAAGGATTTGTG+TGG - chr7_3:3330088-3330107 Msa1089720:CDS 45.0%
!! TGTGGAAATCAGGACTGGTT+TGG - chr7_3:3330106-3330125 Msa1089720:intron 45.0%
! CTTGCACTTTTGAATTGGGG+TGG - chr7_3:3330232-3330251 Msa1089720:intron 45.0%
CCAAGTTCTTTCAGAGCAAG+AGG + chr7_3:3330334-3330353 None:intergenic 45.0%
!! CCTCTTGCTCTGAAAGAACT+TGG - chr7_3:3330331-3330350 Msa1089720:CDS 45.0%
!! ATGGAAAGGAAGCACTTCAG+TGG - chr7_3:3330365-3330384 Msa1089720:CDS 45.0%
! TCTAGAGCTTCTTGTAGTCG+TGG + chr7_3:3330433-3330452 None:intergenic 45.0%
GCATGTTATGCTACAAGCCA+TGG - chr7_3:3330629-3330648 Msa1089720:CDS 45.0%
AAAGAGCTACGACGTGTACT+TGG - chr7_3:3328865-3328884 Msa1089720:three_prime_UTR 45.0%
AAGAGCTACGACGTGTACTT+GGG - chr7_3:3328866-3328885 Msa1089720:three_prime_UTR 45.0%
ACAGCTCTTACTTCAGAAGC+TGG - chr7_3:3328931-3328950 Msa1089720:three_prime_UTR 45.0%
!! GGAATCACTGTTTTCTGGGA+CGG - chr7_3:3328952-3328971 Msa1089720:three_prime_UTR 45.0%
TTCAATCACATTCAGCACCG+AGG + chr7_3:3329013-3329032 None:intergenic 45.0%
TATTCCGGCGACATTTCTTC+GGG + chr7_3:3329174-3329193 None:intergenic 45.0%
GCCGGAATATATGTATGGAG+AGG - chr7_3:3329185-3329204 Msa1089720:CDS 45.0%
CTTGTCTTCATCTTCGGAAG+AGG + chr7_3:3329253-3329272 None:intergenic 45.0%
CTCCTCTCCTAATAGGGATA+TGG - chr7_3:3329644-3329663 Msa1089720:intron 45.0%
CCTCTCCTAATAGGGATATG+GGG - chr7_3:3329646-3329665 Msa1089720:intron 45.0%
CTCTCCTAATAGGGATATGG+GGG - chr7_3:3329647-3329666 Msa1089720:intron 45.0%
TCATCCCCCATATCCCTATT+AGG + chr7_3:3329654-3329673 None:intergenic 45.0%
GTTTCCTCAATGACATCAGC+CGG - chr7_3:3329743-3329762 Msa1089720:intron 45.0%
TTTCCTCAATGACATCAGCC+GGG - chr7_3:3329744-3329763 Msa1089720:intron 45.0%
CTCCATTTCGTTTCCAAACC+CGG + chr7_3:3329765-3329784 None:intergenic 45.0%
!! GTAGGTATCGTTTCGAGTTG+AGG + chr7_3:3329986-3330005 None:intergenic 45.0%
ACGATACCTACAACTGAAGC+AGG - chr7_3:3329995-3330014 Msa1089720:CDS 45.0%
ACTCTTCCTGCTTCAGTTGT+AGG + chr7_3:3330004-3330023 None:intergenic 45.0%
GAGCAGCTAAAGGATTTGTG+TGG - chr7_3:3330088-3330107 Msa1089720:CDS 45.0%
!! TGTGGAAATCAGGACTGGTT+TGG - chr7_3:3330106-3330125 Msa1089720:intron 45.0%
! CTTGCACTTTTGAATTGGGG+TGG - chr7_3:3330232-3330251 Msa1089720:intron 45.0%
CCAAGTTCTTTCAGAGCAAG+AGG + chr7_3:3330334-3330353 None:intergenic 45.0%
!! CCTCTTGCTCTGAAAGAACT+TGG - chr7_3:3330331-3330350 Msa1089720:CDS 45.0%
!! ATGGAAAGGAAGCACTTCAG+TGG - chr7_3:3330365-3330384 Msa1089720:CDS 45.0%
! TCTAGAGCTTCTTGTAGTCG+TGG + chr7_3:3330433-3330452 None:intergenic 45.0%
GCATGTTATGCTACAAGCCA+TGG - chr7_3:3330629-3330648 Msa1089720:CDS 45.0%
GAGTGCTACCGTACCGAAAA+TGG - chr7_3:3329120-3329139 Msa1089720:CDS 50.0%
TCTTCGGGGGAATAGAACAC+AGG + chr7_3:3329159-3329178 None:intergenic 50.0%
ATTCCGGCGACATTTCTTCG+GGG + chr7_3:3329173-3329192 None:intergenic 50.0%
CCCCATATCCCTATTAGGAG+AGG + chr7_3:3329649-3329668 None:intergenic 50.0%
ATAGGGATATGGGGGATGAC+AGG - chr7_3:3329655-3329674 Msa1089720:intron 50.0%
TAGGGATATGGGGGATGACA+GGG - chr7_3:3329656-3329675 Msa1089720:intron 50.0%
ATATGGGGGATGACAGGGAT+TGG - chr7_3:3329661-3329680 Msa1089720:intron 50.0%
AAACCCGGCTGATGTCATTG+AGG + chr7_3:3329750-3329769 None:intergenic 50.0%
TCAATGACATCAGCCGGGTT+TGG - chr7_3:3329749-3329768 Msa1089720:intron 50.0%
AGCCGGGTTTGGAAACGAAA+TGG - chr7_3:3329760-3329779 Msa1089720:intron 50.0%
CGGGTTTGGAAACGAAATGG+AGG - chr7_3:3329763-3329782 Msa1089720:intron 50.0%
!! AATCAGGACTGGTTTGGTCC+AGG - chr7_3:3330112-3330131 Msa1089720:intron 50.0%
AGGCATCTTCTCAAGGAGCA+TGG - chr7_3:3330163-3330182 Msa1089720:intron 50.0%
TTGTAGTCGTGGAGCTGGAA+TGG + chr7_3:3330422-3330441 None:intergenic 50.0%
ATGCTACAAGCCATGGCAAG+AGG - chr7_3:3330636-3330655 Msa1089720:CDS 50.0%
CAAAAGACCGATCAGGTGAG+TGG - chr7_3:3330681-3330700 Msa1089720:intron 50.0%
GAGTGCTACCGTACCGAAAA+TGG - chr7_3:3329120-3329139 Msa1089720:CDS 50.0%
TCTTCGGGGGAATAGAACAC+AGG + chr7_3:3329159-3329178 None:intergenic 50.0%
ATTCCGGCGACATTTCTTCG+GGG + chr7_3:3329173-3329192 None:intergenic 50.0%
CCCCATATCCCTATTAGGAG+AGG + chr7_3:3329649-3329668 None:intergenic 50.0%
ATAGGGATATGGGGGATGAC+AGG - chr7_3:3329655-3329674 Msa1089720:intron 50.0%
TAGGGATATGGGGGATGACA+GGG - chr7_3:3329656-3329675 Msa1089720:intron 50.0%
ATATGGGGGATGACAGGGAT+TGG - chr7_3:3329661-3329680 Msa1089720:intron 50.0%
AAACCCGGCTGATGTCATTG+AGG + chr7_3:3329750-3329769 None:intergenic 50.0%
TCAATGACATCAGCCGGGTT+TGG - chr7_3:3329749-3329768 Msa1089720:intron 50.0%
AGCCGGGTTTGGAAACGAAA+TGG - chr7_3:3329760-3329779 Msa1089720:intron 50.0%
CGGGTTTGGAAACGAAATGG+AGG - chr7_3:3329763-3329782 Msa1089720:intron 50.0%
!! AATCAGGACTGGTTTGGTCC+AGG - chr7_3:3330112-3330131 Msa1089720:intron 50.0%
AGGCATCTTCTCAAGGAGCA+TGG - chr7_3:3330163-3330182 Msa1089720:intron 50.0%
TTGTAGTCGTGGAGCTGGAA+TGG + chr7_3:3330422-3330441 None:intergenic 50.0%
ATGCTACAAGCCATGGCAAG+AGG - chr7_3:3330636-3330655 Msa1089720:CDS 50.0%
CAAAAGACCGATCAGGTGAG+TGG - chr7_3:3330681-3330700 Msa1089720:intron 50.0%
!!! CTGTTTTCTGGGACGGTGAG+AGG - chr7_3:3328959-3328978 Msa1089720:three_prime_UTR 55.0%
!! TTCTGGGACGGTGAGAGGAT+TGG - chr7_3:3328964-3328983 Msa1089720:three_prime_UTR 55.0%
TTCCCCCGAAGAAATGTCGC+CGG - chr7_3:3329167-3329186 Msa1089720:CDS 55.0%
TTCCGGCGACATTTCTTCGG+GGG + chr7_3:3329172-3329191 None:intergenic 55.0%
GCTTCTTGTAGTCGTGGAGC+TGG + chr7_3:3330427-3330446 None:intergenic 55.0%
!!! CTGTTTTCTGGGACGGTGAG+AGG - chr7_3:3328959-3328978 Msa1089720:three_prime_UTR 55.0%
!! TTCTGGGACGGTGAGAGGAT+TGG - chr7_3:3328964-3328983 Msa1089720:three_prime_UTR 55.0%
TTCCCCCGAAGAAATGTCGC+CGG - chr7_3:3329167-3329186 Msa1089720:CDS 55.0%
TTCCGGCGACATTTCTTCGG+GGG + chr7_3:3329172-3329191 None:intergenic 55.0%
GCTTCTTGTAGTCGTGGAGC+TGG + chr7_3:3330427-3330446 None:intergenic 55.0%
GACGGTGAGAGGATTGGACG+TGG - chr7_3:3328970-3328989 Msa1089720:three_prime_UTR 60.0%
GACGGTGAGAGGATTGGACG+TGG - chr7_3:3328970-3328989 Msa1089720:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 3328839 3330780 3328839 ID=Msa1089720;Name=Msa1089720
chr7_3 mRNA 3328839 3330780 3328839 ID=Msa1089720-mRNA-1;Parent=Msa1089720;Name=Msa1089720-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.66|0.5|1|1|1|4|207|469
chr7_3 exon 3328839 3329649 3328839 ID=Msa1089720-mRNA-1:exon:1275;Parent=Msa1089720-mRNA-1
chr7_3 exon 3329771 3330109 3329771 ID=Msa1089720-mRNA-1:exon:1274;Parent=Msa1089720-mRNA-1
chr7_3 exon 3330267 3330684 3330267 ID=Msa1089720-mRNA-1:exon:1273;Parent=Msa1089720-mRNA-1
chr7_3 exon 3330732 3330780 3330732 ID=Msa1089720-mRNA-1:exon:1272;Parent=Msa1089720-mRNA-1
chr7_3 CDS 3330732 3330780 3330732 ID=Msa1089720-mRNA-1:cds;Parent=Msa1089720-mRNA-1
chr7_3 CDS 3330267 3330684 3330267 ID=Msa1089720-mRNA-1:cds;Parent=Msa1089720-mRNA-1
chr7_3 CDS 3329771 3330109 3329771 ID=Msa1089720-mRNA-1:cds;Parent=Msa1089720-mRNA-1
chr7_3 CDS 3329046 3329649 3329046 ID=Msa1089720-mRNA-1:cds;Parent=Msa1089720-mRNA-1
chr7_3 three_prime_UTR 3328839 3329045 3328839 ID=Msa1089720-mRNA-1:three_prime_utr;Parent=Msa1089720-mRNA-1
Gene Sequence

>Msa1089720

ATGTCTTCTACTACCAATACAAAGAGAAAGAGCTACGACGTGTACTTGGCTCTTACTTCAGAAGCTGGAATCACTGTTTTCTGGGACGGTGAGAGGATTGGACGTGGAGATCAAGAAATATCAACCTCGGTGCTGAATGTGATTGAAGATTGCAAAGTTGTTGTAGTCATATTATCAAAGAATTATATGTATTCTAGTCCTAGATGGTATCTTCAAGAATTGGAGAAAATAACTGAGTGCTACCGTACCGAAAATGGTCCTATTGTTTTACCTGTGTTCTATTCCCCCGAAGAAATGTCGCCGGAATATATGTATGGAGAGGCTTTACATGGTTTTCTGGATAGAATCTCAATGAAGGAGAAAACCTCTTCCGAAGATGAAGACAAGTTCATGAGTTGGGTAGCAGAAATCAGCAATGAAGCTTCCAAATATGCTGCATTAGATTTTTTACGATATGGACCAAATGAGAACAGGGTTATACTGATAACAAAGGTAGTTGAATGTGCTACTCTTATGATAAGCAAGAAAAGAGCCTCGTTCCATATAGAGAGCATACATTCTCGTGCCCAAGATGTGATTCAACTATTAAAACAATCAAAATCTCCTCTCCTAATAGGGATATGGGGGATGACAGGGATTGGTAAAACAACCATCGCCAAAGCCATTTATGAACAAATTGGGAACTTTTTTGAGTATAGGTGTTTCCTCAATGACATCAGCCGGGTTTGGAAACGAAATGGAGGTCAAGTTTATGTCCAAGAGCAACTTCTTTCTTCTATTGACAGACCAACTGAATTAAATTATGAGAATTGGAGAGGACCTCAACTCGAAACGATACCTACAACTGAAGCAGGAAGAGTTATTTTAAAAGAAACACTTCGACATAAAACGGTACTTCTTCTACTTGACCATGTTGATAAATTGGAGCAGCTAAAGGATTTGTGTGGAAATCAGGACTGGTTTGGTCCAGGCAGCAAAATAATCATCATGACAACAGATAGGCATCTTCTCAAGGAGCATGGAGTTCACCATATATACAGCGTGAAAGAACTGAACGAAAGTGAATCTCTTGCACTTTTGAATTGGGGTGGAAACAGCCTACCAACAAATACTCAAAGAGATTTTGGTGAACTTTCTAGGCAATTAGTTACTAATTCTGGGAGATTGCCTCTTGCTCTGAAAGAACTTGGGTTATTTTTGAATGGAAAGGAAGCACTTCAGTGGAAGAATGTGTTGAAGAGTCTCGAAAGACTTTCCATTCCAGCTCCACGACTACAAGAAGCTCTAGAAAAGAGTTTTAGTTATTTGAGTGATGAAGAGAAAAGAATATTCCTTGATATAGCATGTTTCTTTGTTGGGATGACCAAAAGGATGTACTCCAAACAACACAATACACCACTCTTCAAATAA
Protein sequence

>Msa1089720

MSSTTNTKRKSYDVYLALTSEAGITVFWDGERIGRGDQEISTSVLNVIEDCKVVVVILSKNYMYSSPRWYLQELEKITECYRTENGPIVLPVFYSPEEMSPEYMYGEALHGFLDRISMKEKTSSEDEDKFMSWVAEISNEASKYAALDFLRYGPNENRVILITKVVECATLMISKKRASFHIESIHSRAQDVIQLLKQSKSPLLIGIWGMTGIGKTTIAKAIYEQIGNFFEYRCFLNDISRVWKRNGGQVYVQEQLLSSIDRPTELNYENWRGPQLETIPTTEAGRVILKETLRHKTVLLLLDHVDKLEQLKDLCGNQDWFGPGSKIIIMTTDRHLLKEHGVHHIYSVKELNESESLALLNWGGNSLPTNTQRDFGELSRQLVTNSGRLPLALKELGLFLNGKEALQWKNVLKSLERLSIPAPRLQEALEKSFSYLSDEEKRIFLDIACFFVGMTKRMYSKQHNTPLFK*