AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0669950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0669950 MtrunA17_Chr4g0009141 44.277 332 129 7 1 294 5 318 2.28e-76 253
Msa0669950 MtrunA17_Chr4g0009141 34.727 311 160 13 10 294 524 817 1.20e-31 124
Msa0669950 MtrunA17_Chr4g0009241 43.881 335 122 9 7 290 14 333 2.16e-68 230
Msa0669950 MtrunA17_Chr4g0009241 33.022 321 171 14 1 294 536 839 1.33e-32 127
Msa0669950 MtrunA17_Chr4g0009101 43.333 330 134 7 1 294 20 332 3.75e-64 218
Msa0669950 MtrunA17_Chr4g0009101 35.294 323 158 12 2 294 534 835 2.73e-35 135
Msa0669950 MtrunA17_Chr4g0009301 42.216 334 133 12 3 294 18 333 2.17e-63 216
Msa0669950 MtrunA17_Chr4g0009301 33.746 323 163 11 2 294 536 837 2.02e-34 132
Msa0669950 MtrunA17_Chr4g0009041 39.394 330 141 12 4 283 19 339 1.01e-50 179
Msa0669950 MtrunA17_Chr4g0009041 33.437 323 164 12 2 294 504 805 2.76e-33 129
Msa0669950 MtrunA17_Chr4g0009401 38.782 312 143 9 11 294 4 295 5.42e-47 169
Msa0669950 MtrunA17_Chr4g0009401 35.849 318 160 13 2 293 495 794 6.42e-36 137
Msa0669950 MtrunA17_Chr7g0255681 37.417 302 153 9 12 294 20 304 2.09e-45 164
Msa0669950 MtrunA17_Chr7g0255681 36.025 322 155 11 3 294 1007 1307 1.76e-42 155
Msa0669950 MtrunA17_Chr7g0255681 36.452 310 152 12 12 294 514 805 3.98e-41 152
Msa0669950 MtrunA17_Chr4g0009341 47.594 187 82 4 112 294 28 202 6.05e-44 155
Msa0669950 MtrunA17_Chr6g0454951 36.615 325 144 12 12 294 82 386 1.59e-43 159
Msa0669950 MtrunA17_Chr6g0455131 37.107 318 151 12 10 295 85 385 3.12e-43 158
Msa0669950 MtrunA17_Chr6g0455221 37.346 324 151 12 3 294 2 305 1.10e-42 156
Msa0669950 MtrunA17_Chr6g0454971 36.452 310 156 10 12 296 49 342 5.80e-42 154
Msa0669950 MtrunA17_Chr6g0454851 36.223 323 151 11 10 294 87 392 1.05e-40 150
Msa0669950 MtrunA17_Chr6g0454831 34.906 318 148 13 10 293 7 299 1.83e-40 150
Msa0669950 MtrunA17_Chr4g0005891 33.634 333 160 8 8 294 23 340 2.68e-40 149
Msa0669950 MtrunA17_Chr4g0005851 35.806 310 159 8 10 294 35 329 4.57e-40 149
Msa0669950 MtrunA17_Chr6g0455211 35.474 327 146 12 12 294 39 344 8.68e-40 148
Msa0669950 MtrunA17_Chr6g0455191 35.987 314 152 12 12 296 317 610 1.15e-39 147
Msa0669950 MtrunA17_Chr4g0005871 35.669 314 154 12 10 294 131 425 5.28e-39 145
Msa0669950 MtrunA17_Chr6g0454931 35.016 317 142 9 26 293 65 366 1.41e-38 144
Msa0669950 MtrunA17_Chr6g0454821 35.826 321 145 13 12 293 41 339 1.83e-38 144
Msa0669950 MtrunA17_Chr6g0455031 36.893 309 151 12 12 294 30 320 3.75e-36 137
Msa0669950 MtrunA17_Chr4g0009171 35.535 318 153 13 7 294 2 297 5.45e-36 137
Msa0669950 MtrunA17_Chr4g0009171 34.084 311 162 12 10 294 730 1023 4.83e-32 125
Msa0669950 MtrunA17_Chr4g0010711 31.847 314 165 11 10 294 517 810 6.43e-35 134
Msa0669950 MtrunA17_Chr4g0010711 30.421 309 171 12 12 294 20 310 3.15e-30 120
Msa0669950 MtrunA17_Chr4g0005591 37.209 258 116 10 65 294 130 369 1.03e-34 133
Msa0669950 MtrunA17_Chr6g0454961 38.206 301 154 10 10 294 42 326 2.24e-33 129
Msa0669950 MtrunA17_Chr8g0338981 30.233 301 175 10 11 293 15 298 2.39e-32 126
Msa0669950 MtrunA17_Chr8g0339011 32.509 283 159 11 26 293 29 294 1.31e-31 124
Msa0669950 MtrunA17_Chr6g0455551 35.276 326 133 9 30 293 66 375 4.17e-30 120
Msa0669950 MtrunA17_Chr8g0338901 30.820 305 174 9 12 296 36 323 1.59e-29 118
Msa0669950 MtrunA17_Chr6g0455251 34.727 311 155 11 12 294 26 316 6.53e-27 110
Msa0669950 MtrunA17_Chr7g0234891 35.043 234 112 9 87 294 1 220 9.33e-27 108
Msa0669950 MtrunA17_Chr4g0041611 30.479 292 163 12 26 294 35 309 5.93e-25 105
Msa0669950 MtrunA17_Chr6g0454901 48.333 120 47 2 179 294 3 111 1.05e-24 103
Msa0669950 MtrunA17_Chr6g0480271 32.107 299 156 12 24 294 31 310 2.49e-24 102
Msa0669950 MtrunA17_Chr6g0480911 31.595 326 168 16 2 294 8 311 4.09e-24 102
Msa0669950 MtrunA17_Chr2g0300251 31.250 304 153 14 24 294 31 311 3.51e-23 99.8
Msa0669950 MtrunA17_Chr4g0009031 81.132 53 10 0 172 224 2 54 3.52e-23 90.9
Msa0669950 MtrunA17_Chr4g0009351 35.874 223 113 9 89 294 3 212 4.27e-23 98.2
Msa0669950 MtrunA17_Chr3g0084151 29.245 318 181 14 1 294 6 303 4.96e-23 99.4
Msa0669950 MtrunA17_Chr6g0482511 30.915 317 164 16 11 295 32 325 1.50e-22 97.8
Msa0669950 MtrunA17_Chr8g0339031 28.571 301 166 10 26 296 31 312 1.94e-22 97.4
Msa0669950 MtrunA17_Chr6g0480041 33.223 301 145 16 26 294 33 309 1.97e-22 97.4
Msa0669950 MtrunA17_Chr6g0479641 29.236 301 164 11 24 295 31 311 2.12e-22 97.4
Msa0669950 MtrunA17_Chr2g0319821 27.852 298 164 12 26 294 59 334 3.31e-22 97.1
Msa0669950 MtrunA17_Chr8g0338881 29.022 317 166 14 12 293 36 328 4.71e-22 96.3
Msa0669950 MtrunA17_Chr6g0479631 33.000 300 147 15 26 294 33 309 1.21e-21 95.1
Msa0669950 MtrunA17_Chr6g0479701 29.430 316 170 14 11 294 21 315 2.97e-21 94.0
Msa0669950 MtrunA17_Chr4g0025831 31.229 301 153 12 26 295 33 310 3.69e-21 93.6
Msa0669950 MtrunA17_Chr8g0368251 28.477 302 160 11 26 295 33 310 3.92e-21 93.6
Msa0669950 MtrunA17_Chr6g0480091 30.363 303 155 14 24 294 31 309 4.41e-21 92.8
Msa0669950 MtrunA17_Chr3g0085541 28.378 296 161 10 29 293 37 312 6.66e-21 92.8
Msa0669950 MtrunA17_Chr6g0478451 30.476 315 165 14 12 294 20 312 7.49e-21 92.8
Msa0669950 MtrunA17_Chr6g0480451 29.966 297 161 12 26 294 97 374 9.85e-21 92.4
Msa0669950 MtrunA17_Chr6g0479821 30.033 303 158 12 24 294 32 312 1.00e-20 92.4
Msa0669950 MtrunA17_Chr8g0354701 31.250 320 160 15 11 294 8 303 1.21e-20 92.4
Msa0669950 MtrunA17_Chr4g0025741 30.201 298 160 11 26 295 33 310 1.63e-20 91.7
Msa0669950 MtrunA17_Chr6g0480461 28.704 324 183 12 1 295 7 311 2.54e-20 91.3
Msa0669950 MtrunA17_Chr5g0420331 29.818 275 152 11 1 245 1 264 3.02e-20 90.9
Msa0669950 MtrunA17_Chr6g0479671 28.525 305 160 12 24 294 29 309 4.17e-20 90.5
Msa0669950 MtrunA17_Chr6g0481141 29.276 304 155 13 26 295 84 361 4.22e-20 90.5
Msa0669950 MtrunA17_Chr6g0479001 29.630 297 162 12 26 294 22 299 4.99e-20 90.5
Msa0669950 MtrunA17_Chr4g0010651 28.205 312 178 9 11 295 10 302 5.04e-20 90.5
Msa0669950 MtrunA17_Chr2g0319851 27.027 296 169 13 26 295 70 344 6.81e-20 90.1
Msa0669950 MtrunA17_Chr4g0025811 29.530 298 162 11 26 295 33 310 7.94e-20 89.7
Msa0669950 MtrunA17_Chr3g0119001 29.032 310 154 16 10 281 21 302 9.41e-20 89.7
Msa0669950 MtrunA17_Chr2g0299881 29.195 298 162 13 26 294 33 310 1.13e-19 89.4
Msa0669950 MtrunA17_Chr2g0299791 28.859 298 163 13 26 294 29 306 1.32e-19 89.4
Msa0669950 MtrunA17_Chr4g0025751 29.866 298 161 11 26 295 33 310 1.40e-19 89.0
Msa0669950 MtrunA17_Chr6g0482321 28.704 324 178 11 1 294 1 301 1.57e-19 89.0
Msa0669950 MtrunA17_Chr4g0005331 31.418 261 158 9 2 248 81 334 2.28e-19 88.6
Msa0669950 MtrunA17_Chr2g0298531 28.704 324 172 16 2 293 12 308 2.84e-19 88.2
Msa0669950 MtrunA17_Chr7g0243021 25.503 298 171 10 26 294 28 303 2.98e-19 86.7
Msa0669950 MtrunA17_Chr6g0478841 29.236 301 158 13 26 294 22 299 3.64e-19 87.8
Msa0669950 MtrunA17_Chr3g0102121 30.476 315 167 16 9 294 16 307 5.66e-19 87.4
Msa0669950 MtrunA17_Chr6g0478741 27.946 297 167 11 26 294 22 299 5.94e-19 87.0
Msa0669950 MtrunA17_Chr7g0256881 28.763 299 156 12 26 293 27 299 7.55e-19 87.0
Msa0669950 MtrunA17_Chr3g0118981 29.389 262 139 11 1 227 7 257 1.11e-18 86.7
Msa0669950 MtrunA17_Chr2g0299841 30.189 318 164 17 11 294 54 347 1.18e-18 86.3
Msa0669950 MtrunA17_Chr3g0085731 26.603 312 181 9 12 293 20 313 1.24e-18 86.3
Msa0669950 MtrunA17_Chr6g0479731 28.333 300 163 11 24 294 31 307 1.80e-18 85.5
Msa0669950 MtrunA17_Chr8g0354721 30.159 315 169 14 11 294 8 302 2.39e-18 85.5
Msa0669950 MtrunA17_Chr6g0479051 28.622 283 162 10 26 294 22 278 2.88e-18 85.1
Msa0669950 MtrunA17_Chr4g0041441 26.603 312 178 12 12 294 5 294 3.00e-18 85.1
Msa0669950 MtrunA17_Chr5g0420341 29.811 265 150 11 1 238 1 256 3.44e-18 85.1
Msa0669950 MtrunA17_Chr6g0480311 29.180 305 159 13 24 295 18 298 4.42e-18 84.7
Msa0669950 MtrunA17_Chr2g0298291 27.329 322 174 14 2 293 12 303 5.17e-18 84.3
Msa0669950 MtrunA17_Chr4g0041931 24.922 321 182 9 8 294 19 314 6.80e-18 84.0
Msa0669950 MtrunA17_Chr3g0081531 30.968 310 171 10 11 294 6 298 6.82e-18 84.3
Msa0669950 MtrunA17_Chr8g0343801 28.115 313 173 14 12 293 13 304 8.84e-18 83.6
Msa0669950 MtrunA17_Chr4g0010521 29.154 319 165 14 11 295 9 300 1.06e-17 83.6
Msa0669950 MtrunA17_Chr4g0041231 27.985 268 151 11 8 245 18 273 1.14e-17 83.6
Msa0669950 MtrunA17_Chr5g0394051 26.644 289 176 11 26 294 40 312 1.18e-17 82.4
Msa0669950 MtrunA17_Chr5g0430531 28.571 301 156 12 29 293 25 302 1.81e-17 82.0
Msa0669950 MtrunA17_Chr4g0005391 30.000 230 134 9 40 248 90 313 2.00e-17 82.8
Msa0669950 MtrunA17_Chr4g0041951 28.996 269 155 11 4 245 70 329 3.90e-17 82.0
Msa0669950 MtrunA17_Chr8g0354711 30.159 315 165 14 11 294 8 298 5.08e-17 81.6
Msa0669950 MtrunA17_Chr7g0242751 26.032 315 177 13 12 294 46 336 6.60e-17 80.9
Msa0669950 MtrunA17_Chr4g0005291 27.599 279 161 12 40 296 100 359 6.82e-17 81.3
Msa0669950 MtrunA17_Chr3g0102171 29.524 315 170 15 9 294 16 307 1.37e-16 80.1
Msa0669950 MtrunA17_Chr4g0018431 28.175 252 140 10 26 248 36 275 1.81e-16 79.7
Msa0669950 MtrunA17_Chr3g0102271 29.206 315 170 15 10 294 17 308 1.85e-16 79.7
Msa0669950 MtrunA17_Chr6g0486521 29.268 328 172 14 1 294 9 310 2.37e-16 79.7
Msa0669950 MtrunA17_Chr1g0172541 27.099 262 156 10 12 248 10 261 3.07e-16 79.3
Msa0669950 MtrunA17_Chr8g0352211 28.839 267 146 11 56 293 60 311 3.61e-16 79.0
Msa0669950 MtrunA17_Chr6g0486221 28.313 332 178 12 1 294 1 310 3.84e-16 79.0
Msa0669950 MtrunA17_Chr4g0009331 48.750 80 40 1 2 80 12 91 6.65e-16 72.0
Msa0669950 MtrunA17_Chr8g0370511 29.719 249 141 9 12 234 11 251 7.74e-16 77.8
Msa0669950 MtrunA17_Chr4g0041241 26.866 268 154 11 8 245 18 273 7.91e-16 77.8
Msa0669950 MtrunA17_Chr6g0486731 28.438 320 185 10 1 294 9 310 1.42e-15 77.0
Msa0669950 MtrunA17_Chr3g0114401 38.211 123 63 3 173 293 69 180 1.54e-15 76.6
Msa0669950 MtrunA17_Chr6g0455161 43.299 97 44 1 197 293 144 229 1.56e-15 74.3
Msa0669950 MtrunA17_Chr7g0242801 26.838 272 159 13 5 245 81 343 1.59e-15 77.0
Msa0669950 MtrunA17_Chr6g0480151 28.239 301 166 13 24 295 31 310 4.56e-15 75.5
Msa0669950 MtrunA17_Chr6g0486301 29.841 315 179 12 5 294 13 310 6.06e-15 75.5
Msa0669950 MtrunA17_Chr3g0084771 28.481 316 172 12 11 294 14 307 7.36e-15 74.3
Msa0669950 MtrunA17_Chr4g0009261 58.929 56 23 0 198 253 1 56 8.66e-15 72.4
Msa0669950 MtrunA17_Chr6g0486271 29.747 316 180 11 4 294 12 310 1.14e-14 74.3
Msa0669950 MtrunA17_Chr6g0480381 29.755 326 174 15 2 294 13 316 2.53e-14 73.2
Msa0669950 MtrunA17_Chr8g0343681 25.806 279 162 11 42 295 76 334 3.08e-14 72.8
Msa0669950 MtrunA17_Chr2g0319921 25.795 283 145 12 26 294 71 302 4.00e-14 72.8
Msa0669950 MtrunA17_Chr2g0299851 30.100 299 157 14 26 294 29 305 6.60e-14 72.4
Msa0669950 MtrunA17_Chr6g0474801 29.856 278 155 13 2 248 7 275 1.22e-13 71.2
Msa0669950 MtrunA17_Chr5g0442761 27.619 315 175 11 11 295 14 305 1.89e-13 70.9
Msa0669950 MtrunA17_Chr6g0451551 27.152 302 163 14 26 294 175 452 3.13e-13 70.1
Msa0669950 MtrunA17_Chr8g0338851 44.186 86 46 2 173 256 105 190 5.53e-13 68.9
Msa0669950 MtrunA17_Chr3g0084721 27.619 315 176 11 11 294 17 310 6.10e-13 69.3
Msa0669950 MtrunA17_Chr6g0482471 27.586 290 169 8 1 260 1 279 7.13e-13 68.9
Msa0669950 MtrunA17_Chr8g0372681 25.373 268 159 10 48 291 51 301 7.87e-13 68.9
Msa0669950 MtrunA17_Chr4g0014831 41.837 98 45 1 198 295 1 86 1.00e-12 68.6
Msa0669950 MtrunA17_Chr2g0299561 26.462 325 177 14 5 294 13 310 1.03e-12 68.6
Msa0669950 MtrunA17_Chr8g0363851 32.258 124 74 3 173 295 10 124 1.32e-12 68.2
Msa0669950 MtrunA17_Chr6g0485991 28.438 320 179 11 4 294 12 310 1.62e-12 68.2
Msa0669950 MtrunA17_Chr3g0084731 28.763 299 161 12 26 294 32 308 1.87e-12 67.8
Msa0669950 MtrunA17_Chr5g0414681 36.111 108 63 5 1 107 1 103 2.07e-12 64.7
Msa0669950 MtrunA17_Chr6g0486361 26.708 322 188 12 1 294 9 310 2.13e-12 67.8
Msa0669950 MtrunA17_Chr8g0348541 29.392 296 166 10 26 297 39 315 2.78e-12 67.4
Msa0669950 MtrunA17_Chr7g0248521 29.221 308 174 10 11 294 19 306 2.85e-12 67.4
Msa0669950 MtrunA17_Chr6g0484161 32.000 150 82 4 148 295 203 334 3.35e-12 67.0
Msa0669950 MtrunA17_Chr7g0248121 29.831 295 159 11 26 294 35 307 3.97e-12 67.0
Msa0669950 MtrunA17_Chr6g0482141 27.445 317 181 12 7 294 13 309 5.06e-12 66.6
Msa0669950 MtrunA17_Chr2g0299921 29.333 300 156 13 26 294 30 304 6.67e-12 66.2
Msa0669950 MtrunA17_Chr8g0362611 42.056 107 55 6 2 107 9 109 7.44e-12 64.7
Msa0669950 MtrunA17_Chr8g0353401 25.087 287 166 12 36 295 36 300 8.01e-12 65.5
Msa0669950 MtrunA17_Chr8g0338831 36.607 112 58 3 183 293 223 322 8.80e-12 65.1
Msa0669950 MtrunA17_Chr8g0342161 25.000 320 181 14 9 295 14 307 1.01e-11 65.1
Msa0669950 MtrunA17_Chr7g0248511 28.205 312 181 10 7 294 21 313 1.22e-11 65.5
Msa0669950 MtrunA17_Chr8g0362601 42.056 107 55 6 2 107 9 109 1.37e-11 64.3
Msa0669950 MtrunA17_Chr3g0077971 27.341 267 159 8 7 248 5 261 2.69e-11 64.3
Msa0669950 MtrunA17_Chr6g0480421 30.994 171 99 6 130 295 12 168 3.87e-11 63.9
Msa0669950 MtrunA17_Chr6g0481331 27.437 277 165 10 2 248 48 318 4.02e-11 63.9
Msa0669950 MtrunA17_Chr8g0350801 28.025 314 175 14 1 284 1 293 5.39e-11 63.5
Msa0669950 MtrunA17_Chr5g0444051 43.299 97 49 5 12 107 188 279 5.45e-11 62.8
Msa0669950 MtrunA17_Chr8g0353371 38.462 104 56 3 192 295 223 318 5.71e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0669950 AT1G17600.1 30.124 322 173 12 1 294 1 298 2.09e-21 94.7
Msa0669950 AT1G27170.2 25.962 312 186 9 9 295 13 304 1.88e-19 89.4
Msa0669950 AT5G17680.1 29.433 282 145 12 39 294 45 298 2.75e-19 88.6
Msa0669950 AT5G17680.2 28.929 280 150 11 39 294 45 299 6.75e-19 87.4
Msa0669950 AT5G48770.1 28.428 299 151 11 29 294 32 300 1.13e-18 87.0
Msa0669950 AT4G16860.1 27.839 273 135 10 56 295 55 298 1.94e-18 86.3
Msa0669950 AT4G16950.6 28.182 330 172 15 1 295 1 300 4.24e-18 85.1
Msa0669950 AT4G16950.2 28.182 330 172 15 1 295 1 300 4.43e-18 85.1
Msa0669950 AT4G16950.1 28.182 330 172 15 1 295 1 300 4.58e-18 85.1
Msa0669950 AT4G16950.5 28.182 330 172 15 1 295 1 300 4.97e-18 85.1
Msa0669950 AT4G16950.3 28.182 330 172 15 1 295 1 300 5.02e-18 85.1
Msa0669950 AT4G16950.4 28.182 330 172 15 1 295 1 300 5.52e-18 84.7
Msa0669950 AT1G27180.1 25.228 329 197 10 1 295 165 478 3.49e-17 82.4
Msa0669950 AT1G27180.5 25.228 329 197 10 1 295 1 314 4.25e-17 82.4
Msa0669950 AT1G27180.8 25.228 329 197 10 1 295 1 314 4.25e-17 82.4
Msa0669950 AT1G65850.1 25.524 286 162 11 39 294 60 324 7.58e-17 81.3
Msa0669950 AT5G41540.1 26.667 330 177 11 1 295 1 300 7.58e-17 81.3
Msa0669950 AT1G65850.2 25.524 286 162 11 39 294 75 339 7.61e-17 81.3
Msa0669950 AT5G36930.3 27.526 287 151 11 8 257 10 276 8.72e-17 81.3
Msa0669950 AT5G41750.1 29.431 299 156 14 26 295 28 300 9.20e-17 81.3
Msa0669950 AT5G41750.2 29.431 299 156 14 26 295 28 300 9.20e-17 81.3
Msa0669950 AT5G41740.2 29.391 279 157 13 33 295 37 291 2.44e-16 79.7
Msa0669950 AT5G41740.1 30.249 281 152 14 33 295 37 291 2.49e-16 79.7
Msa0669950 AT5G58120.1 26.804 291 151 13 39 295 42 304 2.54e-16 79.7
Msa0669950 AT4G16960.1 26.642 274 139 10 56 295 55 300 4.59e-16 79.0
Msa0669950 AT4G16940.1 26.642 274 139 10 56 295 11 256 4.79e-16 79.0
Msa0669950 AT4G16940.4 26.642 274 139 10 56 295 11 256 4.80e-16 79.0
Msa0669950 AT4G16940.6 26.642 274 139 10 56 295 11 256 4.86e-16 79.0
Msa0669950 AT4G16940.2 26.642 274 139 10 56 295 11 256 4.87e-16 79.0
Msa0669950 AT4G16940.3 26.642 274 139 10 56 295 11 256 4.87e-16 79.0
Msa0669950 AT4G16940.5 26.642 274 139 10 56 295 11 256 4.87e-16 79.0
Msa0669950 AT4G16920.3 27.206 272 138 9 56 295 51 294 7.66e-16 78.6
Msa0669950 AT4G16920.5 27.206 272 138 9 56 295 51 294 7.66e-16 78.6
Msa0669950 AT4G16920.4 27.473 273 136 10 56 295 51 294 8.20e-16 78.6
Msa0669950 AT4G16920.7 27.473 273 136 10 56 295 51 294 8.20e-16 78.6
Msa0669950 AT4G16920.2 27.206 272 138 9 56 295 51 294 8.25e-16 78.6
Msa0669950 AT4G16920.8 27.206 272 138 9 56 295 51 294 8.25e-16 78.6
Msa0669950 AT4G16920.1 27.473 273 136 10 56 295 51 294 8.64e-16 78.2
Msa0669950 AT4G16920.6 27.473 273 136 10 56 295 51 294 8.82e-16 78.2
Msa0669950 AT4G16920.9 27.473 273 136 10 56 295 51 294 9.40e-16 78.2
Msa0669950 AT1G72950.1 26.953 256 153 11 1 230 1 248 6.36e-15 74.7
Msa0669950 AT5G46270.3 25.000 332 183 12 1 295 1 303 1.30e-14 74.7
Msa0669950 AT5G46270.2 25.000 332 183 12 1 295 1 303 1.37e-14 74.7
Msa0669950 AT1G63730.1 27.402 281 162 10 39 295 40 302 3.78e-14 73.2
Msa0669950 AT5G45050.1 25.965 285 164 10 14 293 8 250 4.67e-14 73.2
Msa0669950 AT5G45050.2 25.965 285 164 10 14 293 8 250 4.88e-14 73.2
Msa0669950 AT4G16990.6 27.240 279 157 11 40 295 37 292 6.87e-14 72.4
Msa0669950 AT4G16990.11 27.240 279 157 11 40 295 37 292 6.87e-14 72.4
Msa0669950 AT5G45050.3 25.965 285 164 10 14 293 8 250 6.91e-14 72.4
Msa0669950 AT4G16990.1 27.240 279 157 11 40 295 37 292 7.00e-14 72.4
Msa0669950 AT4G16990.8 27.240 279 157 11 40 295 104 359 7.47e-14 72.4
Msa0669950 AT4G16990.17 25.890 309 183 11 10 295 7 292 7.67e-14 72.4
Msa0669950 AT4G16990.10 25.890 309 183 11 10 295 7 292 7.67e-14 72.4
Msa0669950 AT4G16990.13 25.890 309 183 11 10 295 7 292 7.96e-14 72.4
Msa0669950 AT4G16990.2 25.890 309 183 11 10 295 7 292 7.96e-14 72.4
Msa0669950 AT4G16990.9 27.240 279 157 11 40 295 37 292 8.12e-14 72.4
Msa0669950 AT1G63870.1 27.208 283 155 14 39 295 44 301 8.25e-14 72.4
Msa0669950 AT4G16990.12 25.890 309 183 11 10 295 7 292 8.43e-14 72.0
Msa0669950 AT4G16990.7 25.890 309 183 11 10 295 7 292 8.43e-14 72.0
Msa0669950 AT4G19520.2 25.086 291 163 9 20 293 20 272 1.13e-13 72.0
Msa0669950 AT4G19520.4 25.086 291 163 9 20 293 20 272 1.13e-13 72.0
Msa0669950 AT4G19520.3 25.086 291 163 9 20 293 20 272 1.17e-13 72.0
Msa0669950 AT1G63860.2 26.829 287 151 12 39 295 41 298 1.22e-13 71.6
Msa0669950 AT4G19520.1 25.086 291 163 9 20 293 20 272 1.23e-13 72.0
Msa0669950 AT1G63860.6 26.829 287 151 12 39 295 41 298 1.33e-13 71.6
Msa0669950 AT4G19520.5 25.086 291 163 9 20 293 20 272 1.53e-13 71.6
Msa0669950 AT1G63860.1 26.829 287 151 12 39 295 41 298 1.70e-13 71.2
Msa0669950 AT1G63860.4 26.829 287 151 12 39 295 41 298 1.84e-13 71.2
Msa0669950 AT1G63860.5 26.829 287 151 12 39 295 41 298 1.84e-13 71.2
Msa0669950 AT1G63860.3 26.829 287 151 12 39 295 41 298 1.84e-13 71.2
Msa0669950 AT5G46270.1 25.234 321 174 12 12 295 23 314 2.50e-13 70.9
Msa0669950 AT5G46270.5 25.234 321 174 12 12 295 23 314 2.50e-13 70.9
Msa0669950 AT5G46270.4 25.234 321 174 12 12 295 23 314 2.57e-13 70.9
Msa0669950 AT4G16890.2 25.461 271 148 8 54 295 60 305 2.72e-13 70.9
Msa0669950 AT4G16890.3 25.461 271 148 8 54 295 51 296 3.37e-13 70.5
Msa0669950 AT4G16890.1 25.461 271 148 8 54 295 60 305 3.56e-13 70.5
Msa0669950 AT4G16890.5 25.461 271 148 8 54 295 51 296 3.72e-13 70.5
Msa0669950 AT5G51630.1 27.925 265 145 11 56 295 53 296 1.05e-12 68.9
Msa0669950 AT4G12010.1 27.915 283 169 11 39 293 38 313 1.15e-12 68.9
Msa0669950 AT1G63740.2 27.700 213 120 9 41 227 70 274 1.92e-12 68.2
Msa0669950 AT1G72890.1 25.705 319 174 14 10 294 37 326 5.28e-12 66.2
Msa0669950 AT5G46520.1 25.397 252 148 8 1 225 1 239 6.73e-12 66.6
Msa0669950 AT1G63740.1 27.488 211 119 9 43 227 1 203 7.45e-12 66.2
Msa0669950 AT1G56510.1 24.042 287 167 11 39 297 40 303 8.58e-12 66.2
Msa0669950 AT4G08450.2 27.083 288 154 11 40 295 39 302 1.64e-11 65.5
Msa0669950 AT4G08450.1 27.083 288 154 11 40 295 39 302 1.82e-11 65.1
Msa0669950 AT1G72900.1 24.085 328 175 11 1 294 1 288 2.11e-11 64.3
Msa0669950 AT5G38340.3 24.306 288 163 11 39 294 84 348 2.48e-11 64.7
Msa0669950 AT5G38340.1 24.306 288 163 11 39 294 84 348 2.48e-11 64.7
Msa0669950 AT5G51630.5 28.175 252 135 11 69 295 2 232 3.15e-11 64.3
Msa0669950 AT3G51560.1 34.234 111 40 3 193 293 183 270 3.52e-11 64.3
Msa0669950 AT5G51630.4 28.175 252 135 11 69 295 2 232 3.54e-11 64.3
Msa0669950 AT5G51630.6 28.175 252 135 11 69 295 2 232 3.54e-11 64.3
Msa0669950 AT5G18360.1 26.042 288 152 13 39 294 43 301 3.56e-11 64.3
Msa0669950 AT5G51630.2 28.175 252 135 11 69 295 2 232 3.81e-11 64.3
Msa0669950 AT5G38850.1 25.965 285 156 12 39 295 36 293 4.14e-11 63.9
Msa0669950 AT4G36140.1 27.404 208 135 5 58 252 470 674 6.73e-11 63.5
Msa0669950 AT4G36140.2 27.404 208 135 5 58 252 285 489 7.25e-11 63.5
Msa0669950 AT4G16860.2 27.742 155 84 3 148 295 3 136 7.41e-11 63.2
Msa0669950 AT5G22690.1 25.868 317 171 16 12 290 10 300 8.85e-11 63.2
Msa0669950 AT5G22690.2 27.148 291 144 16 40 290 38 300 8.85e-11 63.2
Msa0669950 AT5G22690.4 28.571 259 132 15 40 258 38 283 9.35e-11 63.2

Find 93 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGCAATTAGTTACTAATTC+TGG 0.113762 4_4:-11957060 Msa0669950:three_prime_UTR
TACTTGACCATGTTGATAAT+TGG 0.174989 4_4:-11957295 Msa0669950:CDS
TCAAAATCTCCTCTCCTAAT+AGG 0.190429 4_4:-11957723 Msa0669950:CDS
GTTCCCAATTTGTTCATAAA+TGG 0.191884 4_4:+11957656 Msa0669940:intron
AAAGCCATTTATGAACAAAT+TGG 0.208534 4_4:-11957660 Msa0669950:CDS
ACAAATACTCAAAGAGATTT+TGG 0.213462 4_4:-11957093 Msa0669950:three_prime_UTR
AAAAGCTAATGCAGCATATT+TGG 0.223885 4_4:+11958050 Msa0669940:intron
CTCCTCTCCTAATAGGGATA+TGG 0.227115 4_4:-11957716 Msa0669950:CDS
GAGAATGTATGCTCTCTATT+TGG 0.250054 4_4:+11957778 Msa0669940:intron
GTTCTTTCACGCTGTATATA+TGG 0.260405 4_4:+11957169 Msa0669940:intron
GATATAGCATGTTTCTTTGT+TGG 0.280717 4_4:-11956862 Msa0669950:three_prime_UTR
ACTCTTCCTGCTTCAGTTGT+AGG 0.282627 4_4:+11957359 Msa0669940:intron
ATCTAATTTCATTACTCATT+TGG 0.309914 4_4:+11958015 Msa0669940:intron
CCTCTTGCTCTGAAAGAACT+TGG 0.312696 4_4:-11957030 Msa0669950:three_prime_UTR
GAGTGCTACCGTACCGAAAA+TGG 0.330137 4_4:-11958242 Msa0669950:CDS
CAAAATCTCCTCTCCTAATA+GGG 0.348838 4_4:-11957722 Msa0669950:CDS
ATATAGCATGTTTCTTTGTT+GGG 0.351360 4_4:-11956861 Msa0669950:three_prime_UTR
GAGTGGTGTATTGTGTTGTT+TGG 0.353451 4_4:+11956818 Msa0669940:intron
AAAGGATTTGTGTGGAAATC+AGG 0.357306 4_4:-11957265 Msa0669950:three_prime_UTR
GGCAATTAGTTACTAATTCT+GGG 0.358131 4_4:-11957059 Msa0669950:three_prime_UTR
GTAGCTCTTTCTCTTTGTAT+TGG 0.369944 4_4:+11958511 Msa0669940:intron
TCAATAGTTGAATCACATCT+TGG 0.371653 4_4:+11957751 Msa0669940:intron
TCAATGACATCAGCCGGGTT+TGG 0.378004 4_4:-11957611 Msa0669950:CDS
TCCTCTCCTAATAGGGATAT+GGG 0.380343 4_4:-11957715 Msa0669950:CDS
TTGTTTGGAGTACATCCTTT+TGG 0.387078 4_4:+11956833 Msa0669940:intron
CATGAACTTGTCTTCATCTT+CGG 0.387947 4_4:+11958104 Msa0669940:intron
CTCCATTTCGTTTCCAAACC+CGG 0.389205 4_4:+11957598 Msa0669940:intron
AACTCATAATTTAATTCAGT+TGG 0.399145 4_4:+11957531 Msa0669940:intron
TAGATGGTATCTTCAAGAAT+TGG 0.401057 4_4:-11958276 Msa0669950:CDS
TTACAAGGCTCTTGTCTTCA+AGG 0.402442 4_4:+11956782 Msa0669940:intron
ACTCACAAACACAATATATA+GGG 0.405760 4_4:+11956636 Msa0669940:intron
AATTTGTTCATAAATGGCTT+TGG 0.407708 4_4:+11957662 Msa0669940:intron
TAGAACACAGGTAAAACAAT+AGG 0.409411 4_4:+11958218 Msa0669940:intron
CACTCACAAACACAATATAT+AGG 0.410982 4_4:+11956635 Msa0669940:intron
AAGCCATTTATGAACAAATT+GGG 0.412236 4_4:-11957659 Msa0669950:CDS
AAAGAGCTACGACGTGTACT+TGG 0.429449 4_4:-11958498 Msa0669950:CDS
CTTGTCTTCATCTTCGGAAG+AGG 0.447063 4_4:+11958110 Msa0669940:intron
CAATAGTTGAATCACATCTT+GGG 0.447602 4_4:+11957752 Msa0669940:intron
TGTGGAAATCAGGACTGGTT+TGG 0.452231 4_4:-11957255 Msa0669950:three_prime_UTR
AAATCTCTTTGAGTATTTGT+TGG 0.455981 4_4:+11957096 Msa0669940:intron
CTTAATTATACCTCTTGCCA+TGG 0.458023 4_4:+11956714 Msa0669940:intron
AGCCGGGTTTGGAAACGAAA+TGG 0.469143 4_4:-11957600 Msa0669950:CDS
TAGAAGAAAGAAGTTGCTCT+TGG 0.471854 4_4:+11957562 Msa0669940:intron
TTCTGGGACGGTGAGAGGAT+TGG 0.472250 4_4:-11958398 Msa0669950:CDS
CTTTGTTGGGATGAACCAAA+AGG 0.474023 4_4:-11956848 Msa0669950:three_prime_UTR
TTGATAATTGGAGCAGCTAA+AGG 0.478833 4_4:-11957283 Msa0669950:exon
GCTTCTTGTAGTCGTGGAGC+TGG 0.479776 4_4:+11956937 Msa0669940:intron
AGAAACACTTCGACATAAAA+CGG 0.482345 4_4:-11957327 Msa0669950:CDS
ATATGTATTCTAGTCCTAGA+TGG 0.485036 4_4:-11958292 Msa0669950:CDS
TGAAGACAAGTTCATGAGTT+GGG 0.488521 4_4:-11958097 Msa0669950:CDS
GTTTCCTCAATGACATCAGC+CGG 0.493379 4_4:-11957617 Msa0669950:CDS
TTCATAAATGGCTTTGGCGA+TGG 0.497124 4_4:+11957668 Msa0669940:intron
CTCTTGCTCTGAAAGAACTT+GGG 0.503265 4_4:-11957029 Msa0669950:three_prime_UTR
GTAGGTATCGTTTCGAGTTG+AGG 0.504620 4_4:+11957377 Msa0669940:intron
CAAAGAAACATGCTATATCA+AGG 0.507356 4_4:+11956866 Msa0669940:intron
TTGTAGTCGTGGAGCTGGAA+TGG 0.507613 4_4:+11956942 Msa0669940:intron
AATCAGGACTGGTTTGGTCC+AGG 0.507726 4_4:-11957249 Msa0669950:three_prime_UTR
TAATCATCATGACAACAGAT+AGG 0.509972 4_4:-11957218 Msa0669950:three_prime_UTR
AATTCTTGAAGATACCATCT+AGG 0.510139 4_4:+11958278 Msa0669940:intron
CTCTTTGAGTATTTGTTGGT+AGG 0.510714 4_4:+11957100 Msa0669940:intron
ATCAAGTCAAAAGACCGATC+AGG 0.535765 4_4:-11956686 Msa0669950:three_prime_UTR
CCAAGTTCTTTCAGAGCAAG+AGG 0.536577 4_4:+11957030 Msa0669940:intron
TCTAGAGCTTCTTGTAGTCG+TGG 0.543969 4_4:+11956931 Msa0669940:intron
ATGAAGACAAGTTCATGAGT+TGG 0.547434 4_4:-11958098 Msa0669950:CDS
ACGATACCTACAACTGAAGC+AGG 0.547826 4_4:-11957365 Msa0669950:CDS
GCATGTTATGCTACAAGCCA+TGG 0.549423 4_4:-11956731 Msa0669950:three_prime_UTR
ACAGCTCTTACTTCAGAAGC+TGG 0.551106 4_4:-11958431 Msa0669950:CDS
ATTTGTGTGGAAATCAGGAC+TGG 0.557093 4_4:-11957260 Msa0669950:three_prime_UTR
AACAGATAGGCATCTTCTCA+AGG 0.562577 4_4:-11957205 Msa0669950:three_prime_UTR
AAGGAGACTTATTTGAAGAG+TGG 0.566553 4_4:+11956801 Msa0669940:intron
CCTCTCCTAATAGGGATATG+GGG 0.570767 4_4:-11957714 Msa0669950:CDS
AAGAGCTACGACGTGTACTT+GGG 0.581129 4_4:-11958497 Msa0669950:CDS
CTCTCCTAATAGGGATATGG+GGG 0.586967 4_4:-11957713 Msa0669950:CDS
GACGGTGAGAGGATTGGACG+TGG 0.591785 4_4:-11958392 Msa0669950:CDS
AGGCATCTTCTCAAGGAGCA+TGG 0.593792 4_4:-11957198 Msa0669950:three_prime_UTR
TTTCCTCAATGACATCAGCC+GGG 0.605245 4_4:-11957616 Msa0669950:CDS
ATGGAAAGGAAGCACTTCAG+TGG 0.606116 4_4:-11956996 Msa0669950:three_prime_UTR
AGCTGCTCCAATTATCAACA+TGG 0.606784 4_4:+11957288 Msa0669940:intron
CATAATACCACTCACCTGAT+CGG 0.608784 4_4:+11956672 Msa0669940:intron
CCCCATATCCCTATTAGGAG+AGG 0.617616 4_4:+11957714 Msa0669940:intron
TGTATTGGTAGTAGAAGACA+TGG 0.619431 4_4:+11958526 Msa0669940:intron
ATGCTACAAGCCATGGCAAG+AGG 0.631870 4_4:-11956724 Msa0669950:three_prime_UTR
GAGCAGCTAAAGGATTTGTG+TGG 0.632930 4_4:-11957273 Msa0669950:exon
AAACCCGGCTGATGTCATTG+AGG 0.635186 4_4:+11957613 Msa0669940:intron
TTATCTATTATACAGGAACA+GGG 0.639739 4_4:-11957865 Msa0669950:intron
CAAAAGACCGATCAGGTGAG+TGG 0.645811 4_4:-11956679 Msa0669950:three_prime_UTR
ATGTATTGTAGGAATTGGAG+AGG 0.653064 4_4:-11957401 Msa0669950:intron
CGGGTTTGGAAACGAAATGG+AGG 0.663316 4_4:-11957597 Msa0669950:CDS
GGGTAAACAGATAACAAATG+TGG 0.673460 4_4:-11957844 Msa0669950:CDS
AGATCAAGAAATATCAACCT+CGG 0.688236 4_4:-11958369 Msa0669950:CDS
TTCAATCACATTCAGCACCG+AGG 0.692135 4_4:+11958352 Msa0669940:intron
TATCTATTATACAGGAACAG+GGG 0.705240 4_4:-11957864 Msa0669950:intron
TATGCTCTCTATTTGGAACG+AGG 0.718180 4_4:+11957785 Msa0669940:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAGATTACTAAATCTTTA+TGG - chr4_4:11957127-11957146 Msa0669950:three_prime_UTR 15.0%
!! ATTTATTGTATAAAATTGAG+TGG + chr4_4:11957626-11957645 Msa0669940:intron 15.0%
!!! ACTCAATTTTATACAATAAA+TGG - chr4_4:11957625-11957644 Msa0669950:CDS 15.0%
!! ATTAGATTACTAAATCTTTA+TGG - chr4_4:11957127-11957146 Msa0669950:three_prime_UTR 15.0%
!! ATTTATTGTATAAAATTGAG+TGG + chr4_4:11957626-11957645 Msa0669940:intron 15.0%
!!! ACTCAATTTTATACAATAAA+TGG - chr4_4:11957625-11957644 Msa0669950:CDS 15.0%
!! ATCTAATTTCATTACTCATT+TGG + chr4_4:11957114-11957133 Msa0669940:intron 20.0%
!! AACTCATAATTTAATTCAGT+TGG + chr4_4:11957598-11957617 Msa0669940:intron 20.0%
!! AATATCCATTATTATAGTCT+TGG - chr4_4:11957649-11957668 Msa0669950:CDS 20.0%
!!! TATTTTTATCAATGGTTACA+AGG + chr4_4:11958362-11958381 Msa0669940:intron 20.0%
!!! AAGCTTGTTATTTTTATCAA+TGG + chr4_4:11958370-11958389 Msa0669940:intron 20.0%
!! ATCTAATTTCATTACTCATT+TGG + chr4_4:11957114-11957133 Msa0669940:intron 20.0%
!! AACTCATAATTTAATTCAGT+TGG + chr4_4:11957598-11957617 Msa0669940:intron 20.0%
!! AATATCCATTATTATAGTCT+TGG - chr4_4:11957649-11957668 Msa0669950:CDS 20.0%
!!! TATTTTTATCAATGGTTACA+AGG + chr4_4:11958362-11958381 Msa0669940:intron 20.0%
!!! AAGCTTGTTATTTTTATCAA+TGG + chr4_4:11958370-11958389 Msa0669940:intron 20.0%
!!! ATATGCGTATTATTTTGCTT+TGG - chr4_4:11956664-11956683 Msa0669950:three_prime_UTR 25.0%
!! TAAAACAATAGGACCATTTT+CGG + chr4_4:11956900-11956919 Msa0669940:intron 25.0%
!! CTCTTGTTTATCTATTATAC+AGG - chr4_4:11957254-11957273 Msa0669950:three_prime_UTR 25.0%
! TTTATCTATTATACAGGAAC+AGG - chr4_4:11957260-11957279 Msa0669950:three_prime_UTR 25.0%
! TTATCTATTATACAGGAACA+GGG - chr4_4:11957261-11957280 Msa0669950:three_prime_UTR 25.0%
!! AATTTGTTCATAAATGGCTT+TGG + chr4_4:11957467-11957486 Msa0669940:intron 25.0%
! AAAGCCATTTATGAACAAAT+TGG - chr4_4:11957466-11957485 Msa0669950:intron 25.0%
! AAGCCATTTATGAACAAATT+GGG - chr4_4:11957467-11957486 Msa0669950:intron 25.0%
! ATACACCAAGACTATAATAA+TGG + chr4_4:11957657-11957676 Msa0669940:intron 25.0%
! GCATTTATATCATGTATTGT+AGG - chr4_4:11957714-11957733 Msa0669950:CDS 25.0%
! ATATCATGTATTGTAGGAAT+TGG - chr4_4:11957720-11957739 Msa0669950:CDS 25.0%
! AAATCTCTTTGAGTATTTGT+TGG + chr4_4:11958033-11958052 Msa0669940:intron 25.0%
!! ACAAATACTCAAAGAGATTT+TGG - chr4_4:11958033-11958052 Msa0669950:CDS 25.0%
! ATATAGCATGTTTCTTTGTT+GGG - chr4_4:11958265-11958284 Msa0669950:CDS 25.0%
! ACTCACAAACACAATATATA+GGG + chr4_4:11958493-11958512 Msa0669940:intron 25.0%
!!! ATATGCGTATTATTTTGCTT+TGG - chr4_4:11956664-11956683 Msa0669950:three_prime_UTR 25.0%
!! TAAAACAATAGGACCATTTT+CGG + chr4_4:11956900-11956919 Msa0669940:intron 25.0%
!! CTCTTGTTTATCTATTATAC+AGG - chr4_4:11957254-11957273 Msa0669950:three_prime_UTR 25.0%
! TTTATCTATTATACAGGAAC+AGG - chr4_4:11957260-11957279 Msa0669950:three_prime_UTR 25.0%
! TTATCTATTATACAGGAACA+GGG - chr4_4:11957261-11957280 Msa0669950:three_prime_UTR 25.0%
!! AATTTGTTCATAAATGGCTT+TGG + chr4_4:11957467-11957486 Msa0669940:intron 25.0%
! AAAGCCATTTATGAACAAAT+TGG - chr4_4:11957466-11957485 Msa0669950:intron 25.0%
! AAGCCATTTATGAACAAATT+GGG - chr4_4:11957467-11957486 Msa0669950:intron 25.0%
! ATACACCAAGACTATAATAA+TGG + chr4_4:11957657-11957676 Msa0669940:intron 25.0%
! GCATTTATATCATGTATTGT+AGG - chr4_4:11957714-11957733 Msa0669950:CDS 25.0%
! ATATCATGTATTGTAGGAAT+TGG - chr4_4:11957720-11957739 Msa0669950:CDS 25.0%
! AAATCTCTTTGAGTATTTGT+TGG + chr4_4:11958033-11958052 Msa0669940:intron 25.0%
!! ACAAATACTCAAAGAGATTT+TGG - chr4_4:11958033-11958052 Msa0669950:CDS 25.0%
! ATATAGCATGTTTCTTTGTT+GGG - chr4_4:11958265-11958284 Msa0669950:CDS 25.0%
! ACTCACAAACACAATATATA+GGG + chr4_4:11958493-11958512 Msa0669940:intron 25.0%
AGATCAAGAAATATCAACCT+CGG - chr4_4:11956757-11956776 Msa0669950:three_prime_UTR 30.0%
ATATGTATTCTAGTCCTAGA+TGG - chr4_4:11956834-11956853 Msa0669950:three_prime_UTR 30.0%
AATTCTTGAAGATACCATCT+AGG + chr4_4:11956851-11956870 Msa0669940:intron 30.0%
TAGATGGTATCTTCAAGAAT+TGG - chr4_4:11956850-11956869 Msa0669950:three_prime_UTR 30.0%
TAGAACACAGGTAAAACAAT+AGG + chr4_4:11956911-11956930 Msa0669940:intron 30.0%
!!! TATGGAAAGGCTTTTTTTCA+TGG - chr4_4:11956961-11956980 Msa0669950:three_prime_UTR 30.0%
AAAAGCTAATGCAGCATATT+TGG + chr4_4:11957079-11957098 Msa0669940:intron 30.0%
!!! GCATTAGCTTTTTTACGATA+TGG - chr4_4:11957087-11957106 Msa0669950:three_prime_UTR 30.0%
! CTTTTCACTTATGCACATTT+TGG - chr4_4:11957208-11957227 Msa0669950:three_prime_UTR 30.0%
TATCTATTATACAGGAACAG+GGG - chr4_4:11957262-11957281 Msa0669950:three_prime_UTR 30.0%
CAATAGTTGAATCACATCTT+GGG + chr4_4:11957377-11957396 Msa0669940:intron 30.0%
TCAATAGTTGAATCACATCT+TGG + chr4_4:11957378-11957397 Msa0669940:intron 30.0%
! GTTCCCAATTTGTTCATAAA+TGG + chr4_4:11957473-11957492 Msa0669940:intron 30.0%
!!! TTGGGAACTTTTTTGAGTAT+AGG - chr4_4:11957485-11957504 Msa0669950:intron 30.0%
AGAAACACTTCGACATAAAA+CGG - chr4_4:11957799-11957818 Msa0669950:CDS 30.0%
!! TACTTGACCATGTTGATAAT+TGG - chr4_4:11957831-11957850 Msa0669950:CDS 30.0%
TAATCATCATGACAACAGAT+AGG - chr4_4:11957908-11957927 Msa0669950:intron 30.0%
! AATCTCTTGCACTTTTGAAT+TGG - chr4_4:11957992-11958011 Msa0669950:intron 30.0%
! ATCTCTTGCACTTTTGAATT+GGG - chr4_4:11957993-11958012 Msa0669950:intron 30.0%
AGGCAATTAGTTACTAATTC+TGG - chr4_4:11958066-11958085 Msa0669950:CDS 30.0%
GGCAATTAGTTACTAATTCT+GGG - chr4_4:11958067-11958086 Msa0669950:CDS 30.0%
!!! GAACTTGGGTTATTTTTGAA+TGG - chr4_4:11958111-11958130 Msa0669950:CDS 30.0%
!!! TGGGTTATTTTTGAATGGAA+AGG - chr4_4:11958116-11958135 Msa0669950:CDS 30.0%
CAAAGAAACATGCTATATCA+AGG + chr4_4:11958263-11958282 Msa0669940:intron 30.0%
GATATAGCATGTTTCTTTGT+TGG - chr4_4:11958264-11958283 Msa0669950:CDS 30.0%
CACTCACAAACACAATATAT+AGG + chr4_4:11958494-11958513 Msa0669940:intron 30.0%
AGATCAAGAAATATCAACCT+CGG - chr4_4:11956757-11956776 Msa0669950:three_prime_UTR 30.0%
ATATGTATTCTAGTCCTAGA+TGG - chr4_4:11956834-11956853 Msa0669950:three_prime_UTR 30.0%
AATTCTTGAAGATACCATCT+AGG + chr4_4:11956851-11956870 Msa0669940:intron 30.0%
TAGATGGTATCTTCAAGAAT+TGG - chr4_4:11956850-11956869 Msa0669950:three_prime_UTR 30.0%
TAGAACACAGGTAAAACAAT+AGG + chr4_4:11956911-11956930 Msa0669940:intron 30.0%
!!! TATGGAAAGGCTTTTTTTCA+TGG - chr4_4:11956961-11956980 Msa0669950:three_prime_UTR 30.0%
AAAAGCTAATGCAGCATATT+TGG + chr4_4:11957079-11957098 Msa0669940:intron 30.0%
!!! GCATTAGCTTTTTTACGATA+TGG - chr4_4:11957087-11957106 Msa0669950:three_prime_UTR 30.0%
! CTTTTCACTTATGCACATTT+TGG - chr4_4:11957208-11957227 Msa0669950:three_prime_UTR 30.0%
TATCTATTATACAGGAACAG+GGG - chr4_4:11957262-11957281 Msa0669950:three_prime_UTR 30.0%
CAATAGTTGAATCACATCTT+GGG + chr4_4:11957377-11957396 Msa0669940:intron 30.0%
TCAATAGTTGAATCACATCT+TGG + chr4_4:11957378-11957397 Msa0669940:intron 30.0%
! GTTCCCAATTTGTTCATAAA+TGG + chr4_4:11957473-11957492 Msa0669940:intron 30.0%
!!! TTGGGAACTTTTTTGAGTAT+AGG - chr4_4:11957485-11957504 Msa0669950:intron 30.0%
AGAAACACTTCGACATAAAA+CGG - chr4_4:11957799-11957818 Msa0669950:CDS 30.0%
!! TACTTGACCATGTTGATAAT+TGG - chr4_4:11957831-11957850 Msa0669950:CDS 30.0%
TAATCATCATGACAACAGAT+AGG - chr4_4:11957908-11957927 Msa0669950:intron 30.0%
! AATCTCTTGCACTTTTGAAT+TGG - chr4_4:11957992-11958011 Msa0669950:intron 30.0%
! ATCTCTTGCACTTTTGAATT+GGG - chr4_4:11957993-11958012 Msa0669950:intron 30.0%
AGGCAATTAGTTACTAATTC+TGG - chr4_4:11958066-11958085 Msa0669950:CDS 30.0%
GGCAATTAGTTACTAATTCT+GGG - chr4_4:11958067-11958086 Msa0669950:CDS 30.0%
!!! GAACTTGGGTTATTTTTGAA+TGG - chr4_4:11958111-11958130 Msa0669950:CDS 30.0%
!!! TGGGTTATTTTTGAATGGAA+AGG - chr4_4:11958116-11958135 Msa0669950:CDS 30.0%
CAAAGAAACATGCTATATCA+AGG + chr4_4:11958263-11958282 Msa0669940:intron 30.0%
GATATAGCATGTTTCTTTGT+TGG - chr4_4:11958264-11958283 Msa0669950:CDS 30.0%
CACTCACAAACACAATATAT+AGG + chr4_4:11958494-11958513 Msa0669940:intron 30.0%
GTAGCTCTTTCTCTTTGTAT+TGG + chr4_4:11956618-11956637 Msa0669940:intron 35.0%
GCCTTTCCATACATATATTC+CGG + chr4_4:11956952-11956971 Msa0669940:intron 35.0%
!!! GGCTTTTTTTCATGGTTTTC+TGG - chr4_4:11956969-11956988 Msa0669950:three_prime_UTR 35.0%
TCTGGATAGAATCTCAATGA+AGG - chr4_4:11956987-11957006 Msa0669950:three_prime_UTR 35.0%
CATGAACTTGTCTTCATCTT+CGG + chr4_4:11957025-11957044 Msa0669940:intron 35.0%
ATGAAGACAAGTTCATGAGT+TGG - chr4_4:11957028-11957047 Msa0669950:three_prime_UTR 35.0%
TGAAGACAAGTTCATGAGTT+GGG - chr4_4:11957029-11957048 Msa0669950:three_prime_UTR 35.0%
GGGTAAACAGATAACAAATG+TGG - chr4_4:11957282-11957301 Msa0669950:exon 35.0%
GAGAATGTATGCTCTCTATT+TGG + chr4_4:11957351-11957370 Msa0669940:intron 35.0%
TCAAAATCTCCTCTCCTAAT+AGG - chr4_4:11957403-11957422 Msa0669950:intron 35.0%
CAAAATCTCCTCTCCTAATA+GGG - chr4_4:11957404-11957423 Msa0669950:intron 35.0%
TAGAAGAAAGAAGTTGCTCT+TGG + chr4_4:11957567-11957586 Msa0669940:intron 35.0%
ATGTATTGTAGGAATTGGAG+AGG - chr4_4:11957725-11957744 Msa0669950:CDS 35.0%
! TTGATAATTGGAGCAGCTAA+AGG - chr4_4:11957843-11957862 Msa0669950:CDS 35.0%
AAAGGATTTGTGTGGAAATC+AGG - chr4_4:11957861-11957880 Msa0669950:intron 35.0%
!! ATGATGATTATTTTGCTGCC+TGG + chr4_4:11957898-11957917 Msa0669940:intron 35.0%
GTTCTTTCACGCTGTATATA+TGG + chr4_4:11957960-11957979 Msa0669940:intron 35.0%
! TCTCTTGCACTTTTGAATTG+GGG - chr4_4:11957994-11958013 Msa0669950:intron 35.0%
! CTCTTTGAGTATTTGTTGGT+AGG + chr4_4:11958029-11958048 Msa0669940:intron 35.0%
!! GAGATTTTGGTGAACTTTCT+AGG - chr4_4:11958046-11958065 Msa0669950:CDS 35.0%
!! TTGTTTGGAGTACATCCTTT+TGG + chr4_4:11958296-11958315 Msa0669940:intron 35.0%
AAGGAGACTTATTTGAAGAG+TGG + chr4_4:11958328-11958347 Msa0669940:intron 35.0%
CTTAATTATACCTCTTGCCA+TGG + chr4_4:11958415-11958434 Msa0669940:intron 35.0%
! TGTGTTTGTGAGTGATTTTG+AGG - chr4_4:11958500-11958519 Msa0669950:CDS 35.0%
! GTATTGGTAGTAGAAGACAT+TGG + chr4_4:11956602-11956621 Msa0669940:intron 35.0%
GTAGCTCTTTCTCTTTGTAT+TGG + chr4_4:11956618-11956637 Msa0669940:intron 35.0%
GCCTTTCCATACATATATTC+CGG + chr4_4:11956952-11956971 Msa0669940:intron 35.0%
!!! GGCTTTTTTTCATGGTTTTC+TGG - chr4_4:11956969-11956988 Msa0669950:three_prime_UTR 35.0%
TCTGGATAGAATCTCAATGA+AGG - chr4_4:11956987-11957006 Msa0669950:three_prime_UTR 35.0%
CATGAACTTGTCTTCATCTT+CGG + chr4_4:11957025-11957044 Msa0669940:intron 35.0%
ATGAAGACAAGTTCATGAGT+TGG - chr4_4:11957028-11957047 Msa0669950:three_prime_UTR 35.0%
TGAAGACAAGTTCATGAGTT+GGG - chr4_4:11957029-11957048 Msa0669950:three_prime_UTR 35.0%
GGGTAAACAGATAACAAATG+TGG - chr4_4:11957282-11957301 Msa0669950:exon 35.0%
GAGAATGTATGCTCTCTATT+TGG + chr4_4:11957351-11957370 Msa0669940:intron 35.0%
TCAAAATCTCCTCTCCTAAT+AGG - chr4_4:11957403-11957422 Msa0669950:intron 35.0%
CAAAATCTCCTCTCCTAATA+GGG - chr4_4:11957404-11957423 Msa0669950:intron 35.0%
TAGAAGAAAGAAGTTGCTCT+TGG + chr4_4:11957567-11957586 Msa0669940:intron 35.0%
ATGTATTGTAGGAATTGGAG+AGG - chr4_4:11957725-11957744 Msa0669950:CDS 35.0%
! TTGATAATTGGAGCAGCTAA+AGG - chr4_4:11957843-11957862 Msa0669950:CDS 35.0%
AAAGGATTTGTGTGGAAATC+AGG - chr4_4:11957861-11957880 Msa0669950:intron 35.0%
!! ATGATGATTATTTTGCTGCC+TGG + chr4_4:11957898-11957917 Msa0669940:intron 35.0%
GTTCTTTCACGCTGTATATA+TGG + chr4_4:11957960-11957979 Msa0669940:intron 35.0%
! TCTCTTGCACTTTTGAATTG+GGG - chr4_4:11957994-11958013 Msa0669950:intron 35.0%
! CTCTTTGAGTATTTGTTGGT+AGG + chr4_4:11958029-11958048 Msa0669940:intron 35.0%
!! GAGATTTTGGTGAACTTTCT+AGG - chr4_4:11958046-11958065 Msa0669950:CDS 35.0%
!! TTGTTTGGAGTACATCCTTT+TGG + chr4_4:11958296-11958315 Msa0669940:intron 35.0%
AAGGAGACTTATTTGAAGAG+TGG + chr4_4:11958328-11958347 Msa0669940:intron 35.0%
CTTAATTATACCTCTTGCCA+TGG + chr4_4:11958415-11958434 Msa0669940:intron 35.0%
! TGTGTTTGTGAGTGATTTTG+AGG - chr4_4:11958500-11958519 Msa0669950:CDS 35.0%
! AAGCTGGAATCACTGTTTTC+TGG - chr4_4:11956711-11956730 Msa0669950:three_prime_UTR 40.0%
! AGCTGGAATCACTGTTTTCT+GGG - chr4_4:11956712-11956731 Msa0669950:three_prime_UTR 40.0%
! CAATAGGACCATTTTCGGTA+CGG + chr4_4:11956895-11956914 Msa0669940:intron 40.0%
ATATTCCGGCGACATTTCTT+CGG + chr4_4:11956938-11956957 Msa0669940:intron 40.0%
ATGTCGCCGGAATATATGTA+TGG - chr4_4:11956943-11956962 Msa0669950:three_prime_UTR 40.0%
GCCGGAATATATGTATGGAA+AGG - chr4_4:11956948-11956967 Msa0669950:three_prime_UTR 40.0%
! TATGCTCTCTATTTGGAACG+AGG + chr4_4:11957344-11957363 Msa0669940:intron 40.0%
TCCTCTCCTAATAGGGATAT+GGG - chr4_4:11957411-11957430 Msa0669950:intron 40.0%
!! TTCATAAATGGCTTTGGCGA+TGG + chr4_4:11957461-11957480 Msa0669940:intron 40.0%
AGCTGCTCCAATTATCAACA+TGG + chr4_4:11957841-11957860 Msa0669940:intron 40.0%
ATTTGTGTGGAAATCAGGAC+TGG - chr4_4:11957866-11957885 Msa0669950:intron 40.0%
AACAGATAGGCATCTTCTCA+AGG - chr4_4:11957921-11957940 Msa0669950:intron 40.0%
!! CTCTTGCTCTGAAAGAACTT+GGG - chr4_4:11958097-11958116 Msa0669950:CDS 40.0%
CTTTGTTGGGATGAACCAAA+AGG - chr4_4:11958278-11958297 Msa0669950:CDS 40.0%
! GAGTGGTGTATTGTGTTGTT+TGG + chr4_4:11958311-11958330 Msa0669940:intron 40.0%
TTACAAGGCTCTTGTCTTCA+AGG + chr4_4:11958347-11958366 Msa0669940:intron 40.0%
ATCAAGTCAAAAGACCGATC+AGG - chr4_4:11958440-11958459 Msa0669950:CDS 40.0%
CATAATACCACTCACCTGAT+CGG + chr4_4:11958457-11958476 Msa0669940:intron 40.0%
! AAGCTGGAATCACTGTTTTC+TGG - chr4_4:11956711-11956730 Msa0669950:three_prime_UTR 40.0%
! AGCTGGAATCACTGTTTTCT+GGG - chr4_4:11956712-11956731 Msa0669950:three_prime_UTR 40.0%
! CAATAGGACCATTTTCGGTA+CGG + chr4_4:11956895-11956914 Msa0669940:intron 40.0%
ATATTCCGGCGACATTTCTT+CGG + chr4_4:11956938-11956957 Msa0669940:intron 40.0%
ATGTCGCCGGAATATATGTA+TGG - chr4_4:11956943-11956962 Msa0669950:three_prime_UTR 40.0%
GCCGGAATATATGTATGGAA+AGG - chr4_4:11956948-11956967 Msa0669950:three_prime_UTR 40.0%
! TATGCTCTCTATTTGGAACG+AGG + chr4_4:11957344-11957363 Msa0669940:intron 40.0%
TCCTCTCCTAATAGGGATAT+GGG - chr4_4:11957411-11957430 Msa0669950:intron 40.0%
!! TTCATAAATGGCTTTGGCGA+TGG + chr4_4:11957461-11957480 Msa0669940:intron 40.0%
AGCTGCTCCAATTATCAACA+TGG + chr4_4:11957841-11957860 Msa0669940:intron 40.0%
ATTTGTGTGGAAATCAGGAC+TGG - chr4_4:11957866-11957885 Msa0669950:intron 40.0%
AACAGATAGGCATCTTCTCA+AGG - chr4_4:11957921-11957940 Msa0669950:intron 40.0%
!! CTCTTGCTCTGAAAGAACTT+GGG - chr4_4:11958097-11958116 Msa0669950:CDS 40.0%
CTTTGTTGGGATGAACCAAA+AGG - chr4_4:11958278-11958297 Msa0669950:CDS 40.0%
! GAGTGGTGTATTGTGTTGTT+TGG + chr4_4:11958311-11958330 Msa0669940:intron 40.0%
TTACAAGGCTCTTGTCTTCA+AGG + chr4_4:11958347-11958366 Msa0669940:intron 40.0%
ATCAAGTCAAAAGACCGATC+AGG - chr4_4:11958440-11958459 Msa0669950:CDS 40.0%
CATAATACCACTCACCTGAT+CGG + chr4_4:11958457-11958476 Msa0669940:intron 40.0%
AAAGAGCTACGACGTGTACT+TGG - chr4_4:11956628-11956647 Msa0669950:three_prime_UTR 45.0%
AAGAGCTACGACGTGTACTT+GGG - chr4_4:11956629-11956648 Msa0669950:three_prime_UTR 45.0%
ACAGCTCTTACTTCAGAAGC+TGG - chr4_4:11956695-11956714 Msa0669950:three_prime_UTR 45.0%
!! GGAATCACTGTTTTCTGGGA+CGG - chr4_4:11956716-11956735 Msa0669950:three_prime_UTR 45.0%
TTCAATCACATTCAGCACCG+AGG + chr4_4:11956777-11956796 Msa0669940:intron 45.0%
TTCTTCGGGGAATAGAACAC+AGG + chr4_4:11956923-11956942 Msa0669940:intron 45.0%
TATTCCGGCGACATTTCTTC+GGG + chr4_4:11956937-11956956 Msa0669940:intron 45.0%
CTTGTCTTCATCTTCGGAAG+AGG + chr4_4:11957019-11957038 Msa0669940:intron 45.0%
CTCCTCTCCTAATAGGGATA+TGG - chr4_4:11957410-11957429 Msa0669950:intron 45.0%
CCTCTCCTAATAGGGATATG+GGG - chr4_4:11957412-11957431 Msa0669950:intron 45.0%
CTCTCCTAATAGGGATATGG+GGG - chr4_4:11957413-11957432 Msa0669950:intron 45.0%
TCATCCCCCATATCCCTATT+AGG + chr4_4:11957420-11957439 Msa0669940:intron 45.0%
GTTTCCTCAATGACATCAGC+CGG - chr4_4:11957509-11957528 Msa0669950:intron 45.0%
TTTCCTCAATGACATCAGCC+GGG - chr4_4:11957510-11957529 Msa0669950:intron 45.0%
CTCCATTTCGTTTCCAAACC+CGG + chr4_4:11957531-11957550 Msa0669940:intron 45.0%
!! GTAGGTATCGTTTCGAGTTG+AGG + chr4_4:11957752-11957771 Msa0669940:intron 45.0%
ACGATACCTACAACTGAAGC+AGG - chr4_4:11957761-11957780 Msa0669950:CDS 45.0%
ACTCTTCCTGCTTCAGTTGT+AGG + chr4_4:11957770-11957789 Msa0669940:intron 45.0%
GAGCAGCTAAAGGATTTGTG+TGG - chr4_4:11957853-11957872 Msa0669950:CDS 45.0%
!! TGTGGAAATCAGGACTGGTT+TGG - chr4_4:11957871-11957890 Msa0669950:intron 45.0%
! CTTGCACTTTTGAATTGGGG+TGG - chr4_4:11957997-11958016 Msa0669950:intron 45.0%
CCAAGTTCTTTCAGAGCAAG+AGG + chr4_4:11958099-11958118 Msa0669940:intron 45.0%
!! CCTCTTGCTCTGAAAGAACT+TGG - chr4_4:11958096-11958115 Msa0669950:CDS 45.0%
!! ATGGAAAGGAAGCACTTCAG+TGG - chr4_4:11958130-11958149 Msa0669950:intron 45.0%
! TCTAGAGCTTCTTGTAGTCG+TGG + chr4_4:11958198-11958217 Msa0669940:intron 45.0%
GCATGTTATGCTACAAGCCA+TGG - chr4_4:11958395-11958414 Msa0669950:CDS 45.0%
AAAGAGCTACGACGTGTACT+TGG - chr4_4:11956628-11956647 Msa0669950:three_prime_UTR 45.0%
AAGAGCTACGACGTGTACTT+GGG - chr4_4:11956629-11956648 Msa0669950:three_prime_UTR 45.0%
ACAGCTCTTACTTCAGAAGC+TGG - chr4_4:11956695-11956714 Msa0669950:three_prime_UTR 45.0%
!! GGAATCACTGTTTTCTGGGA+CGG - chr4_4:11956716-11956735 Msa0669950:three_prime_UTR 45.0%
TTCAATCACATTCAGCACCG+AGG + chr4_4:11956777-11956796 Msa0669940:intron 45.0%
TTCTTCGGGGAATAGAACAC+AGG + chr4_4:11956923-11956942 Msa0669940:intron 45.0%
TATTCCGGCGACATTTCTTC+GGG + chr4_4:11956937-11956956 Msa0669940:intron 45.0%
CTTGTCTTCATCTTCGGAAG+AGG + chr4_4:11957019-11957038 Msa0669940:intron 45.0%
CTCCTCTCCTAATAGGGATA+TGG - chr4_4:11957410-11957429 Msa0669950:intron 45.0%
CCTCTCCTAATAGGGATATG+GGG - chr4_4:11957412-11957431 Msa0669950:intron 45.0%
CTCTCCTAATAGGGATATGG+GGG - chr4_4:11957413-11957432 Msa0669950:intron 45.0%
TCATCCCCCATATCCCTATT+AGG + chr4_4:11957420-11957439 Msa0669940:intron 45.0%
GTTTCCTCAATGACATCAGC+CGG - chr4_4:11957509-11957528 Msa0669950:intron 45.0%
TTTCCTCAATGACATCAGCC+GGG - chr4_4:11957510-11957529 Msa0669950:intron 45.0%
CTCCATTTCGTTTCCAAACC+CGG + chr4_4:11957531-11957550 Msa0669940:intron 45.0%
!! GTAGGTATCGTTTCGAGTTG+AGG + chr4_4:11957752-11957771 Msa0669940:intron 45.0%
ACGATACCTACAACTGAAGC+AGG - chr4_4:11957761-11957780 Msa0669950:CDS 45.0%
ACTCTTCCTGCTTCAGTTGT+AGG + chr4_4:11957770-11957789 Msa0669940:intron 45.0%
GAGCAGCTAAAGGATTTGTG+TGG - chr4_4:11957853-11957872 Msa0669950:CDS 45.0%
!! TGTGGAAATCAGGACTGGTT+TGG - chr4_4:11957871-11957890 Msa0669950:intron 45.0%
! CTTGCACTTTTGAATTGGGG+TGG - chr4_4:11957997-11958016 Msa0669950:intron 45.0%
CCAAGTTCTTTCAGAGCAAG+AGG + chr4_4:11958099-11958118 Msa0669940:intron 45.0%
!! CCTCTTGCTCTGAAAGAACT+TGG - chr4_4:11958096-11958115 Msa0669950:CDS 45.0%
!! ATGGAAAGGAAGCACTTCAG+TGG - chr4_4:11958130-11958149 Msa0669950:intron 45.0%
! TCTAGAGCTTCTTGTAGTCG+TGG + chr4_4:11958198-11958217 Msa0669940:intron 45.0%
GCATGTTATGCTACAAGCCA+TGG - chr4_4:11958395-11958414 Msa0669950:CDS 45.0%
GAGTGCTACCGTACCGAAAA+TGG - chr4_4:11956884-11956903 Msa0669950:three_prime_UTR 50.0%
ATTCCCCGAAGAAATGTCGC+CGG - chr4_4:11956930-11956949 Msa0669950:three_prime_UTR 50.0%
ATTCCGGCGACATTTCTTCG+GGG + chr4_4:11956936-11956955 Msa0669940:intron 50.0%
CCCCATATCCCTATTAGGAG+AGG + chr4_4:11957415-11957434 Msa0669940:intron 50.0%
ATAGGGATATGGGGGATGAC+AGG - chr4_4:11957421-11957440 Msa0669950:intron 50.0%
TAGGGATATGGGGGATGACA+GGG - chr4_4:11957422-11957441 Msa0669950:intron 50.0%
ATATGGGGGATGACAGGGAT+TGG - chr4_4:11957427-11957446 Msa0669950:intron 50.0%
AAACCCGGCTGATGTCATTG+AGG + chr4_4:11957516-11957535 Msa0669940:intron 50.0%
TCAATGACATCAGCCGGGTT+TGG - chr4_4:11957515-11957534 Msa0669950:intron 50.0%
AGCCGGGTTTGGAAACGAAA+TGG - chr4_4:11957526-11957545 Msa0669950:intron 50.0%
CGGGTTTGGAAACGAAATGG+AGG - chr4_4:11957529-11957548 Msa0669950:intron 50.0%
!! AATCAGGACTGGTTTGGTCC+AGG - chr4_4:11957877-11957896 Msa0669950:intron 50.0%
AGGCATCTTCTCAAGGAGCA+TGG - chr4_4:11957928-11957947 Msa0669950:intron 50.0%
TTGTAGTCGTGGAGCTGGAA+TGG + chr4_4:11958187-11958206 Msa0669940:intron 50.0%
ATGCTACAAGCCATGGCAAG+AGG - chr4_4:11958402-11958421 Msa0669950:CDS 50.0%
CAAAAGACCGATCAGGTGAG+TGG - chr4_4:11958447-11958466 Msa0669950:CDS 50.0%
GAGTGCTACCGTACCGAAAA+TGG - chr4_4:11956884-11956903 Msa0669950:three_prime_UTR 50.0%
ATTCCCCGAAGAAATGTCGC+CGG - chr4_4:11956930-11956949 Msa0669950:three_prime_UTR 50.0%
ATTCCGGCGACATTTCTTCG+GGG + chr4_4:11956936-11956955 Msa0669940:intron 50.0%
CCCCATATCCCTATTAGGAG+AGG + chr4_4:11957415-11957434 Msa0669940:intron 50.0%
ATAGGGATATGGGGGATGAC+AGG - chr4_4:11957421-11957440 Msa0669950:intron 50.0%
TAGGGATATGGGGGATGACA+GGG - chr4_4:11957422-11957441 Msa0669950:intron 50.0%
ATATGGGGGATGACAGGGAT+TGG - chr4_4:11957427-11957446 Msa0669950:intron 50.0%
AAACCCGGCTGATGTCATTG+AGG + chr4_4:11957516-11957535 Msa0669940:intron 50.0%
TCAATGACATCAGCCGGGTT+TGG - chr4_4:11957515-11957534 Msa0669950:intron 50.0%
AGCCGGGTTTGGAAACGAAA+TGG - chr4_4:11957526-11957545 Msa0669950:intron 50.0%
CGGGTTTGGAAACGAAATGG+AGG - chr4_4:11957529-11957548 Msa0669950:intron 50.0%
!! AATCAGGACTGGTTTGGTCC+AGG - chr4_4:11957877-11957896 Msa0669950:intron 50.0%
AGGCATCTTCTCAAGGAGCA+TGG - chr4_4:11957928-11957947 Msa0669950:intron 50.0%
TTGTAGTCGTGGAGCTGGAA+TGG + chr4_4:11958187-11958206 Msa0669940:intron 50.0%
ATGCTACAAGCCATGGCAAG+AGG - chr4_4:11958402-11958421 Msa0669950:CDS 50.0%
CAAAAGACCGATCAGGTGAG+TGG - chr4_4:11958447-11958466 Msa0669950:CDS 50.0%
!!! CTGTTTTCTGGGACGGTGAG+AGG - chr4_4:11956723-11956742 Msa0669950:three_prime_UTR 55.0%
!! TTCTGGGACGGTGAGAGGAT+TGG - chr4_4:11956728-11956747 Msa0669950:three_prime_UTR 55.0%
GCTTCTTGTAGTCGTGGAGC+TGG + chr4_4:11958192-11958211 Msa0669940:intron 55.0%
!!! CTGTTTTCTGGGACGGTGAG+AGG - chr4_4:11956723-11956742 Msa0669950:three_prime_UTR 55.0%
!! TTCTGGGACGGTGAGAGGAT+TGG - chr4_4:11956728-11956747 Msa0669950:three_prime_UTR 55.0%
GCTTCTTGTAGTCGTGGAGC+TGG + chr4_4:11958192-11958211 Msa0669940:intron 55.0%
GACGGTGAGAGGATTGGACG+TGG - chr4_4:11956734-11956753 Msa0669950:three_prime_UTR 60.0%
GACGGTGAGAGGATTGGACG+TGG - chr4_4:11956734-11956753 Msa0669950:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 11956602 11958546 11956602 ID=Msa0669950;Name=Msa0669950
chr4_4 mRNA 11956602 11958546 11956602 ID=Msa0669950-mRNA-1;Parent=Msa0669950;Name=Msa0669950-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0.66|0.5|1|1|1|4|684|298
chr4_4 exon 11956602 11957412 11956602 ID=Msa0669950-mRNA-1:exon:3588;Parent=Msa0669950-mRNA-1
chr4_4 exon 11957534 11957872 11957534 ID=Msa0669950-mRNA-1:exon:3587;Parent=Msa0669950-mRNA-1
chr4_4 exon 11958030 11958139 11958030 ID=Msa0669950-mRNA-1:exon:3586;Parent=Msa0669950-mRNA-1
chr4_4 exon 11958226 11958546 11958226 ID=Msa0669950-mRNA-1:exon:3585;Parent=Msa0669950-mRNA-1
chr4_4 CDS 11958226 11958546 11958226 ID=Msa0669950-mRNA-1:cds;Parent=Msa0669950-mRNA-1
chr4_4 CDS 11958030 11958139 11958030 ID=Msa0669950-mRNA-1:cds;Parent=Msa0669950-mRNA-1
chr4_4 CDS 11957534 11957872 11957534 ID=Msa0669950-mRNA-1:cds;Parent=Msa0669950-mRNA-1
chr4_4 CDS 11957286 11957412 11957286 ID=Msa0669950-mRNA-1:cds;Parent=Msa0669950-mRNA-1
chr4_4 three_prime_UTR 11956602 11957285 11956602 ID=Msa0669950-mRNA-1:three_prime_utr;Parent=Msa0669950-mRNA-1
Gene Sequence

>Msa0669950

ATGTCTTCTACTACCAATACAAAGAGAAAGAGCTACGACGTGTACTTGGGTCTCTGTCATAAATATGCGTATTATTTTGCTTTGGAACTCTATACAGCTCTTACTTCAGAAGCTGGAATCACTGTTTTCTGGGACGGTGAGAGGATTGGACGTGGAGATCAAGAAATATCAACCTCGGTGCTGAATGTGATTGAAGATTGCAAAGTTGTTGTAGTCATATTATCAAAGAATTATATGTATTCTAGTCCTAGATGGTATCTTCAAGAATTGGAGAAAATAACTGAGTGCTACCGTACCGAAAATGGTCCTATTGTTTTACCTGAGAAAACCTCTTCCGAAGATGAAGACAAGTTCATGAGTTGGGTAGCAGAAATCAGCAATGAAGCTTCCAAATATGCTGCATTAGCTTTTTTACGATATGGACCAAATGAGAACAGGGGTAAACAGATAACAAATGTGGTTAAATGTGCTACTCTTATGATAAGCAAGAAAAGAGCCTCGTTCCAAATAGAGAGCATACATTCTCGTGCCCAAGATGTGATTCAACTATTGAAACAATCAAAATCTCCTCTCCTAATAGGGATATGGGGGATGACAGGGATTGGTAAAACAACCATCGCCAAAGCCATTTATGAACAAATTGGGAACTTTTTTGAGTATAGGTGTTTCCTCAATGACATCAGCCGGGTTTGGAAACGAAATGGAGGTCAAGTTTATGTCCAAGAGCAACTTCTTTCTTCTATTGACAGACCAACTGAATTAAATTATGAGAATTGGAGAGGACCTCAACTCGAAACGATACCTACAACTGAAGCAGGAAGAGTTATTTTAAAAGAAACACTTCGACATAAAACGGTACTTCTTCTACTTGACCATGTTGATAATTGGAGCAGCTAA
Protein sequence

>Msa0669950

MSSTTNTKRKSYDVYLGLCHKYAYYFALELYTALTSEAGITVFWDGERIGRGDQEISTSVLNVIEDCKVVVVILSKNYMYSSPRWYLQELEKITECYRTENGPIVLPEKTSSEDEDKFMSWVAEISNEASKYAALAFLRYGPNENRGKQITNVVKCATLMISKKRASFQIESIHSRAQDVIQLLKQSKSPLLIGIWGMTGIGKTTIAKAIYEQIGNFFEYRCFLNDISRVWKRNGGQVYVQEQLLSSIDRPTELNYENWRGPQLETIPTTEAGRVILKETLRHKTVLLLLDHVDNWSS*