Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1096750 | XP_003621817.2 | 94.805 | 539 | 28 | 0 | 24 | 562 | 2 | 540 | 0.0 | 1033 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1096750 | G7KVR8 | 94.805 | 539 | 28 | 0 | 24 | 562 | 2 | 540 | 0.0 | 1033 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1053040 | Msa1096750 | 0.853827 | 1.846633e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1096750 | MtrunA17_Chr7g0222931 | 94.805 | 539 | 28 | 0 | 24 | 562 | 2 | 540 | 0.0 | 1033 |
| Msa1096750 | MtrunA17_Chr1g0182221 | 37.230 | 556 | 302 | 11 | 24 | 557 | 2 | 532 | 6.97e-108 | 333 |
| Msa1096750 | MtrunA17_Chr4g0030901 | 38.545 | 550 | 223 | 15 | 24 | 559 | 2 | 450 | 1.36e-105 | 325 |
| Msa1096750 | MtrunA17_Chr1g0182481 | 48.485 | 132 | 68 | 0 | 412 | 543 | 240 | 371 | 1.15e-34 | 139 |
| Msa1096750 | MtrunA17_Chr2g0320451 | 41.593 | 113 | 61 | 1 | 422 | 529 | 222 | 334 | 2.71e-19 | 92.4 |
| Msa1096750 | MtrunA17_Chr2g0320431 | 38.938 | 113 | 64 | 1 | 422 | 529 | 19 | 131 | 2.11e-18 | 85.9 |
| Msa1096750 | MtrunA17_Chr7g0265211 | 31.081 | 148 | 97 | 4 | 408 | 550 | 228 | 375 | 8.20e-16 | 81.3 |
| Msa1096750 | MtrunA17_Chr1g0179841 | 31.746 | 126 | 81 | 2 | 430 | 550 | 99 | 224 | 7.79e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1096750 | AT5G13660.1 | 36.299 | 562 | 273 | 14 | 42 | 560 | 13 | 532 | 8.43e-98 | 307 |
| Msa1096750 | AT5G13660.2 | 36.234 | 563 | 273 | 15 | 42 | 560 | 13 | 533 | 5.22e-96 | 303 |
| Msa1096750 | AT5G59830.3 | 54.450 | 191 | 73 | 3 | 369 | 559 | 246 | 422 | 2.19e-65 | 219 |
| Msa1096750 | AT5G59830.3 | 31.875 | 160 | 107 | 2 | 24 | 182 | 2 | 160 | 4.60e-15 | 78.2 |
| Msa1096750 | AT5G59830.1 | 54.450 | 191 | 73 | 3 | 369 | 559 | 246 | 422 | 2.19e-65 | 219 |
| Msa1096750 | AT5G59830.1 | 31.875 | 160 | 107 | 2 | 24 | 182 | 2 | 160 | 4.60e-15 | 78.2 |
| Msa1096750 | AT5G59830.2 | 54.450 | 191 | 73 | 3 | 369 | 559 | 246 | 422 | 2.19e-65 | 219 |
| Msa1096750 | AT5G59830.2 | 31.875 | 160 | 107 | 2 | 24 | 182 | 2 | 160 | 4.60e-15 | 78.2 |
| Msa1096750 | AT5G13660.6 | 31.197 | 468 | 261 | 14 | 42 | 478 | 13 | 450 | 9.96e-48 | 173 |
| Msa1096750 | AT5G13660.7 | 31.197 | 468 | 261 | 14 | 42 | 478 | 13 | 450 | 9.96e-48 | 173 |
| Msa1096750 | AT5G13660.4 | 31.343 | 469 | 260 | 15 | 42 | 478 | 13 | 451 | 4.02e-46 | 168 |
| Msa1096750 | AT3G53680.2 | 51.538 | 130 | 63 | 0 | 416 | 545 | 172 | 301 | 3.51e-37 | 147 |
| Msa1096750 | AT3G53680.1 | 51.538 | 130 | 63 | 0 | 416 | 545 | 172 | 301 | 3.59e-37 | 147 |
| Msa1096750 | AT2G37520.1 | 45.513 | 156 | 75 | 2 | 398 | 545 | 138 | 291 | 3.15e-36 | 144 |
| Msa1096750 | AT5G13660.5 | 29.438 | 445 | 253 | 14 | 42 | 455 | 13 | 427 | 9.98e-36 | 139 |
| Msa1096750 | AT5G13660.3 | 29.438 | 445 | 253 | 14 | 42 | 455 | 13 | 427 | 9.98e-36 | 139 |
| Msa1096750 | AT2G27980.1 | 30.702 | 114 | 74 | 1 | 426 | 534 | 377 | 490 | 6.61e-13 | 72.4 |
| Msa1096750 | AT2G36720.1 | 31.897 | 116 | 77 | 1 | 424 | 537 | 258 | 373 | 6.48e-11 | 65.9 |
| Msa1096750 | AT2G36720.2 | 31.897 | 116 | 77 | 1 | 424 | 537 | 258 | 373 | 6.48e-11 | 65.9 |
Find 136 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCAACATCTCTAAATTT+TGG | 0.158676 | 7_3:+21566538 | Msa1096750:CDS |
| CACAGCAGTTCCATTTCTTT+TGG | 0.171039 | 7_3:+21567081 | Msa1096750:CDS |
| AACATGGGAAGGAATGATTT+TGG | 0.179977 | 7_3:+21566457 | Msa1096750:CDS |
| TTCTTTCTCTTGTAATTTGC+TGG | 0.222369 | 7_3:+21568242 | Msa1096750:three_prime_UTR |
| TAATAGTTCTGATCCGTTAA+TGG | 0.239862 | 7_3:+21567149 | Msa1096750:CDS |
| GTGCTATTTACAGGTGGATT+AGG | 0.277455 | 7_3:-21567228 | None:intergenic |
| GAAGGCTTCTTCGCCGTCTT+TGG | 0.290403 | 7_3:-21567297 | None:intergenic |
| AACCACTGATGACTTCTCTT+TGG | 0.320372 | 7_3:-21566214 | None:intergenic |
| AATCTTCAAGGAGTCATAAA+AGG | 0.320515 | 7_3:+21567507 | Msa1096750:CDS |
| CTTGAGCTTCAGCGCATCTA+TGG | 0.322542 | 7_3:+21568020 | Msa1096750:CDS |
| CAACACCTTGAGCTGAGTTC+TGG | 0.325535 | 7_3:-21567176 | None:intergenic |
| ATGGGTCACATCTTCAATAA+AGG | 0.329133 | 7_3:+21566721 | Msa1096750:CDS |
| TGCTATTTACAGGTGGATTA+GGG | 0.335921 | 7_3:-21567227 | None:intergenic |
| TTGATTCACTCAGATCCTTC+TGG | 0.339933 | 7_3:-21567203 | None:intergenic |
| ACCAAAGGAACTTTCGTACT+TGG | 0.339999 | 7_3:+21567860 | Msa1096750:CDS |
| AATAGTTCTGATCCGTTAAT+GGG | 0.344955 | 7_3:+21567150 | Msa1096750:CDS |
| CATTTCAGAATAAAGGCTTC+TGG | 0.345828 | 7_3:+21566125 | Msa1096750:CDS |
| CAAGGAGTCATAAAAGGAAC+TGG | 0.362115 | 7_3:+21567513 | Msa1096750:CDS |
| GTCAAAAGTTTGTTGTCAAC+TGG | 0.363595 | 7_3:+21567342 | Msa1096750:CDS |
| TTGTAGATATGTAACTTCTT+TGG | 0.365565 | 7_3:+21568099 | Msa1096750:three_prime_UTR |
| AACAATGAATGTTTCTCAAT+GGG | 0.370603 | 7_3:+21566312 | Msa1096750:CDS |
| AAATTCTCCGGCGTTAGTTC+CGG | 0.370990 | 7_3:+21564645 | Msa1096750:CDS |
| TCAAAGAATATGTGACTGTT+AGG | 0.374223 | 7_3:-21567739 | None:intergenic |
| TCTCAATGGGAAACCAGTTC+GGG | 0.378276 | 7_3:+21566325 | Msa1096750:CDS |
| GAAGGGAAGCTGTTAGTAGA+AGG | 0.385334 | 7_3:-21567315 | None:intergenic |
| TTCTCAATGGGAAACCAGTT+CGG | 0.391371 | 7_3:+21566324 | Msa1096750:CDS |
| CAACAATGAATGTTTCTCAA+TGG | 0.391558 | 7_3:+21566311 | Msa1096750:CDS |
| CACTTCCATTGTTATACGTT+GGG | 0.393576 | 7_3:-21566684 | None:intergenic |
| AGGAGAAACTTTCACAACTA+TGG | 0.396844 | 7_3:+21566954 | Msa1096750:CDS |
| CAATGGGTCGGTCCTTTGAC+AGG | 0.400048 | 7_3:+21566803 | Msa1096750:CDS |
| ATGAAAACCTCCAAAAGAAA+TGG | 0.400464 | 7_3:-21567091 | None:intergenic |
| GTTTGATTCCACCTTATCAT+AGG | 0.400493 | 7_3:-21566983 | None:intergenic |
| TGGGTCACATCTTCAATAAA+GGG | 0.400593 | 7_3:+21566722 | Msa1096750:CDS |
| TCCAAGTACGAAAGTTCCTT+TGG | 0.410052 | 7_3:-21567861 | None:intergenic |
| CAGCTATGCAACCAACTTCT+CGG | 0.415402 | 7_3:-21566153 | None:intergenic |
| TTCTTGTTGCTGAACATTTG+AGG | 0.417010 | 7_3:-21566253 | None:intergenic |
| GAGTTCTGGTTGCCCATTAA+CGG | 0.417278 | 7_3:-21567162 | None:intergenic |
| AGTCACATATTCTTTGAGAA+TGG | 0.417958 | 7_3:+21567745 | Msa1096750:CDS |
| TCAGACAATTGGCCAGTGAC+TGG | 0.422372 | 7_3:-21566355 | None:intergenic |
| ATAACAATGGGTCAGTCATA+TGG | 0.422911 | 7_3:+21566841 | Msa1096750:CDS |
| GCATGAGAGCGTTACATCAA+TGG | 0.428896 | 7_3:+21566912 | Msa1096750:CDS |
| GGTCCAACCTATGGTAAATC+AGG | 0.436238 | 7_3:+21566934 | Msa1096750:CDS |
| AGCTATGCAACCAACTTCTC+GGG | 0.441566 | 7_3:-21566152 | None:intergenic |
| AAAGTTCCTTTGGTTGATAG+TGG | 0.444705 | 7_3:-21567851 | None:intergenic |
| TTGTTGATGGGTCACAATCA+TGG | 0.445474 | 7_3:+21566757 | Msa1096750:CDS |
| TGATATCTGCAAGGGGCAAA+AGG | 0.456965 | 7_3:+21567551 | Msa1096750:CDS |
| ATATTTCCACTTCCAATTGA+CGG | 0.459621 | 7_3:-21566433 | None:intergenic |
| GATGCTATTCAAACTGTGAC+AGG | 0.460759 | 7_3:+21567826 | Msa1096750:CDS |
| CAGTGGAGTCATTCAGTTGA+GGG | 0.465470 | 7_3:-21567119 | None:intergenic |
| CTCATGCCCCATGGAATATG+AGG | 0.468596 | 7_3:-21566896 | None:intergenic |
| CGGTCCTTTGACAGGGGCGA+TGG | 0.475949 | 7_3:+21566811 | Msa1096750:CDS |
| TCTCCTGATTTACCATAGGT+TGG | 0.477084 | 7_3:-21566937 | None:intergenic |
| TATGGCTCCTTCCTATGATA+AGG | 0.482881 | 7_3:+21566972 | Msa1096750:CDS |
| TCGGGATTTCACCCAGTCAC+TGG | 0.483723 | 7_3:+21566343 | Msa1096750:CDS |
| TAAAATATTGTACATGGTCA+AGG | 0.484112 | 7_3:+21567385 | Msa1096750:CDS |
| ATGAATTTGAGCGTCACGCT+GGG | 0.489424 | 7_3:+21567701 | Msa1096750:CDS |
| CCAAAATTTAGAGATGTTGA+AGG | 0.491770 | 7_3:-21566538 | None:intergenic |
| CATGAGAGCGTTACATCAAT+GGG | 0.492001 | 7_3:+21566913 | Msa1096750:CDS |
| AACAAGAAACAAGCAGTTGA+AGG | 0.495670 | 7_3:+21566268 | Msa1096750:CDS |
| AACATTCCGTCAATTGGAAG+TGG | 0.497012 | 7_3:+21566427 | Msa1096750:CDS |
| GATGGAAATTTCATAACAAT+GGG | 0.497410 | 7_3:+21566829 | Msa1096750:CDS |
| GAACATAACCGAACTTATCA+TGG | 0.498568 | 7_3:-21568059 | None:intergenic |
| AATATATTGTTATCAGCTGC+TGG | 0.498749 | 7_3:-21566613 | None:intergenic |
| AGCTGCTACCATGATAAGTT+CGG | 0.507571 | 7_3:+21568051 | Msa1096750:exon |
| TATGGTAATGATTCGTCTAT+CGG | 0.508871 | 7_3:+21566487 | Msa1096750:CDS |
| TCACTTCCATTGTTATACGT+TGG | 0.511609 | 7_3:-21566685 | None:intergenic |
| GACTGGGTGAAATCCCGAAC+TGG | 0.512048 | 7_3:-21566338 | None:intergenic |
| GCCACCGTCGGGAAATTCTC+CGG | 0.514291 | 7_3:+21564633 | Msa1096750:CDS |
| TTCTGGAGTCCCCGAGAAGT+TGG | 0.514546 | 7_3:+21566142 | Msa1096750:CDS |
| ACATCAATGGGTCCAACCTA+TGG | 0.518084 | 7_3:+21566925 | Msa1096750:CDS |
| TCTAGGAACCTCATATTCCA+TGG | 0.519808 | 7_3:+21566888 | Msa1096750:CDS |
| CGATGGAAATTTCATAACAA+TGG | 0.521756 | 7_3:+21566828 | Msa1096750:CDS |
| TTCTTCAGTGTCACTATCAA+CGG | 0.529026 | 7_3:+21564604 | Msa1096750:intron |
| CTCTTGAACAACAGCATAGA+CGG | 0.530061 | 7_3:-21567773 | None:intergenic |
| AAGTGACAACACCATTGCTA+TGG | 0.530676 | 7_3:+21566702 | Msa1096750:CDS |
| GAGTTGCCGCTGTCAAAAGA+TGG | 0.533466 | 7_3:-21567021 | None:intergenic |
| AGTTTCTCCTGATTTACCAT+AGG | 0.534049 | 7_3:-21566941 | None:intergenic |
| CTAGGAACCTCATATTCCAT+GGG | 0.535133 | 7_3:+21566889 | Msa1096750:CDS |
| TATGAATTTGAGCGTCACGC+TGG | 0.536356 | 7_3:+21567700 | Msa1096750:CDS |
| CAGTTGAAGGTGTTAGTGAC+AGG | 0.538066 | 7_3:+21566281 | Msa1096750:CDS |
| GATTCCACCTTATCATAGGA+AGG | 0.538712 | 7_3:-21566979 | None:intergenic |
| GAGAAGTCATCAGTGGTTTG+TGG | 0.544150 | 7_3:+21566219 | Msa1096750:CDS |
| CACATCTTCAATAAAGGGGA+AGG | 0.546475 | 7_3:+21566727 | Msa1096750:CDS |
| CAGACAATTGGCCAGTGACT+GGG | 0.547013 | 7_3:-21566354 | None:intergenic |
| ATTTCCATCGCCCCTGTCAA+AGG | 0.551415 | 7_3:-21566815 | None:intergenic |
| ATCGAACTATGACACGTGTA+CGG | 0.555366 | 7_3:+21564483 | None:intergenic |
| GATGACAATTTGATATCTCT+AGG | 0.565214 | 7_3:+21566871 | Msa1096750:CDS |
| AGTGACAACACCATTGCTAT+GGG | 0.569952 | 7_3:+21566703 | Msa1096750:CDS |
| CTGTCAATGTCTCATTCCAC+AGG | 0.570056 | 7_3:+21566511 | Msa1096750:CDS |
| TGCATAGCTGAAGAAAATGT+TGG | 0.572386 | 7_3:+21566166 | Msa1096750:CDS |
| TATCAGCTGCTGGCGTGCCA+TGG | 0.576021 | 7_3:-21566603 | None:intergenic |
| CCTCAACTGAATGACTCCAC+TGG | 0.578212 | 7_3:+21567120 | Msa1096750:CDS |
| AAAATATTGTACATGGTCAA+GGG | 0.581599 | 7_3:+21567386 | Msa1096750:CDS |
| AATGGGTCGGTCCTTTGACA+GGG | 0.582450 | 7_3:+21566804 | Msa1096750:CDS |
| GGAAGTGGAAATATAAACAT+GGG | 0.583747 | 7_3:+21566442 | Msa1096750:CDS |
| TAACTTCTTTGGTGTATCAG+TGG | 0.587893 | 7_3:+21568110 | Msa1096750:three_prime_UTR |
| TTCCGGTAAAATATTGTACA+TGG | 0.591553 | 7_3:+21567379 | Msa1096750:CDS |
| GGCTCCTTCCTATGATAAGG+TGG | 0.593466 | 7_3:+21566975 | Msa1096750:CDS |
| AAGGAAGGTGGTGGTTTGTG+AGG | 0.593482 | 7_3:-21568287 | None:intergenic |
| AATGGGTCAGTCATATGGAA+AGG | 0.594796 | 7_3:+21566846 | Msa1096750:CDS |
| AACTGCTGTGACAATTACTC+AGG | 0.595100 | 7_3:-21567068 | None:intergenic |
| GTGGAAATATAAACATGGGA+AGG | 0.596002 | 7_3:+21566446 | Msa1096750:CDS |
| TTTGGAGTGCTATTTACAGG+TGG | 0.603301 | 7_3:-21567234 | None:intergenic |
| CAAAATTTAGAGATGTTGAA+GGG | 0.603626 | 7_3:-21566537 | None:intergenic |
| TGGAAGTGGAAATATAAACA+TGG | 0.609494 | 7_3:+21566441 | Msa1096750:CDS |
| GAAGCTCAAGAGTAGCAGCT+TGG | 0.610166 | 7_3:-21568007 | None:intergenic |
| GGCAACCAGAACTCAGCTCA+AGG | 0.613118 | 7_3:+21567171 | Msa1096750:CDS |
| CACCAAACCGGAACTAACGC+CGG | 0.616872 | 7_3:-21564652 | None:intergenic |
| TGTTCATGTGATATCTGCAA+GGG | 0.617361 | 7_3:+21567543 | Msa1096750:CDS |
| AGATGTTGAAGGGCCTCCTG+TGG | 0.619182 | 7_3:-21566527 | None:intergenic |
| AGAACTATTAATCATTCCAG+TGG | 0.619671 | 7_3:-21567136 | None:intergenic |
| GGGTCACATCTTCAATAAAG+GGG | 0.624180 | 7_3:+21566723 | Msa1096750:CDS |
| CCAGTGGAGTCATTCAGTTG+AGG | 0.624460 | 7_3:-21567120 | None:intergenic |
| CAAGTCAGAGATTCTGACCA+TGG | 0.628932 | 7_3:+21566586 | Msa1096750:CDS |
| GTGTTCATGTGATATCTGCA+AGG | 0.629189 | 7_3:+21567542 | Msa1096750:CDS |
| TCAGACCCAACGTATAACAA+TGG | 0.630204 | 7_3:+21566679 | Msa1096750:CDS |
| TGTAACGCTCTCATGCCCCA+TGG | 0.634145 | 7_3:-21566905 | None:intergenic |
| ACATCTTCAATAAAGGGGAA+GGG | 0.634399 | 7_3:+21566728 | Msa1096750:CDS |
| GCTTCAGCGCATCTATGGAA+AGG | 0.634908 | 7_3:+21568025 | Msa1096750:CDS |
| GCCGGAGAATTTCCCGACGG+TGG | 0.636874 | 7_3:-21564634 | None:intergenic |
| TCAAGGTGTTGACAGCCAGA+AGG | 0.640542 | 7_3:+21567188 | Msa1096750:CDS |
| GATGGGTCACAATCATGGCA+AGG | 0.642988 | 7_3:+21566762 | Msa1096750:CDS |
| ATGGGTCGGTCCTTTGACAG+GGG | 0.647731 | 7_3:+21566805 | Msa1096750:CDS |
| AAGGAGTCATAAAAGGAACT+GGG | 0.654430 | 7_3:+21567514 | Msa1096750:CDS |
| TGCAGATATCACATGAACAC+AGG | 0.662846 | 7_3:-21567539 | None:intergenic |
| TTCAGTGTCACTATCAACGG+CGG | 0.664989 | 7_3:+21564607 | Msa1096750:intron |
| GCTATGCAACCAACTTCTCG+GGG | 0.670612 | 7_3:-21566151 | None:intergenic |
| TGAATTTGAGCGTCACGCTG+GGG | 0.673881 | 7_3:+21567702 | Msa1096750:CDS |
| TCAATGTCTCATTCCACAGG+AGG | 0.675589 | 7_3:+21566514 | Msa1096750:CDS |
| CAGGAGCCACTATCAACCAA+AGG | 0.676859 | 7_3:+21567845 | Msa1096750:CDS |
| AACCAAAGAGAAGTCATCAG+TGG | 0.682911 | 7_3:+21566212 | Msa1096750:CDS |
| ATATTGTACATGGTCAAGGG+AGG | 0.698377 | 7_3:+21567389 | Msa1096750:CDS |
| GAAGATGTGACCCATAGCAA+TGG | 0.703236 | 7_3:-21566713 | None:intergenic |
| TAGGAACCTCATATTCCATG+GGG | 0.726058 | 7_3:+21566890 | Msa1096750:CDS |
| AACGCCGGAGAATTTCCCGA+CGG | 0.732784 | 7_3:-21564637 | None:intergenic |
| GTTCATGTGATATCTGCAAG+GGG | 0.764444 | 7_3:+21567544 | Msa1096750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTAATACTTTTTTTTTTTT+TGG | + | chr7_3:21564771-21564790 | Msa1096750:intron | 10.0% |
| !!! | AAGTAAAAAAAATCATTTTA+AGG | - | chr7_3:21565319-21565338 | None:intergenic | 10.0% |
| !!! | TTTTTTACTTATAATAGTAT+AGG | + | chr7_3:21565329-21565348 | Msa1096750:intron | 10.0% |
| !!! | TGTTTTTAATTTACAAAATT+TGG | + | chr7_3:21565779-21565798 | Msa1096750:intron | 10.0% |
| !! | ATTTATTTAATTGAACAAGT+TGG | - | chr7_3:21564681-21564700 | None:intergenic | 15.0% |
| !!! | AAAAGTATTAACAAATAGAA+GGG | - | chr7_3:21564763-21564782 | None:intergenic | 15.0% |
| !!! | AAAAAGTATTAACAAATAGA+AGG | - | chr7_3:21564764-21564783 | None:intergenic | 15.0% |
| !! | CATTCACAATAAAAATTTAT+TGG | - | chr7_3:21565624-21565643 | None:intergenic | 15.0% |
| !! | TTCTATGTAGTTATTTAAAT+CGG | + | chr7_3:21565740-21565759 | Msa1096750:intron | 15.0% |
| !! | AGTAAGAAATTAAAAGAAAA+AGG | - | chr7_3:21565920-21565939 | None:intergenic | 15.0% |
| !!! | GTTATTTTTTAACTAGTTTA+TGG | + | chr7_3:21565975-21565994 | Msa1096750:intron | 15.0% |
| !!! | AAAAGTTTTAAAATGTTAGT+AGG | - | chr7_3:21567467-21567486 | None:intergenic | 15.0% |
| !! | ATTAAAATTAGAAGTTGAAA+AGG | - | chr7_3:21567961-21567980 | None:intergenic | 15.0% |
| !!! | TTTTTGTGATTTTTGCAAAT+GGG | - | chr7_3:21564576-21564595 | None:intergenic | 20.0% |
| !! | TTTACTTATAATAGTATAGG+AGG | + | chr7_3:21565332-21565351 | Msa1096750:intron | 20.0% |
| !! | TTACTTATAATAGTATAGGA+GGG | + | chr7_3:21565333-21565352 | Msa1096750:intron | 20.0% |
| !! | AGAAATTAAAAGAAAAAGGA+AGG | - | chr7_3:21565916-21565935 | None:intergenic | 20.0% |
| !!! | TCTTTTAATTTCTTACTTGA+TGG | + | chr7_3:21565923-21565942 | Msa1096750:intron | 20.0% |
| !!! | CTTTTAATTTCTTACTTGAT+GGG | + | chr7_3:21565924-21565943 | Msa1096750:intron | 20.0% |
| !!! | TTTTAATTTCTTACTTGATG+GGG | + | chr7_3:21565925-21565944 | Msa1096750:intron | 20.0% |
| !!! | TTTTAGTCATTTCAGAATAA+AGG | + | chr7_3:21566118-21566137 | Msa1096750:intron | 20.0% |
| !!! | GATAACAATATATTTTCGAT+AGG | + | chr7_3:21566622-21566641 | Msa1096750:CDS | 20.0% |
| !!! | AGATCAACATATTTTATCAA+TGG | + | chr7_3:21566786-21566805 | Msa1096750:CDS | 20.0% |
| !!! | GATCAACATATTTTATCAAT+GGG | + | chr7_3:21566787-21566806 | Msa1096750:CDS | 20.0% |
| !!! | TCATTTTTAGCATTAGATTT+TGG | - | chr7_3:21567255-21567274 | None:intergenic | 20.0% |
| !!! | CAACTTGAATGTTTTATTTA+TGG | + | chr7_3:21568186-21568205 | Msa1096750:three_prime_UTR | 20.0% |
| !! | GTTTTTGTGATTTTTGCAAA+TGG | - | chr7_3:21564577-21564596 | None:intergenic | 25.0% |
| !! | TATTTAATTGAACAAGTTGG+AGG | - | chr7_3:21564678-21564697 | None:intergenic | 25.0% |
| !!! | TAATGCAGATTTTGATTTGA+TGG | + | chr7_3:21564827-21564846 | Msa1096750:intron | 25.0% |
| !!! | TGTTTGTCTTTGTTTTTTCA+TGG | + | chr7_3:21564973-21564992 | Msa1096750:intron | 25.0% |
| ! | CATAGTAAGTATACTTACTT+TGG | + | chr7_3:21565013-21565032 | Msa1096750:intron | 25.0% |
| ! | TTCTTGAATAACGATATATC+TGG | + | chr7_3:21565255-21565274 | Msa1096750:intron | 25.0% |
| !!! | ATCTGGTCTATATTTTAAAC+CGG | + | chr7_3:21565272-21565291 | Msa1096750:intron | 25.0% |
| !!! | TATTTTAAACCGGATACATT+AGG | + | chr7_3:21565282-21565301 | Msa1096750:intron | 25.0% |
| ! | TCAAAGCATGCTTAAAAAAA+GGG | - | chr7_3:21565392-21565411 | None:intergenic | 25.0% |
| ! | TTCAAAGCATGCTTAAAAAA+AGG | - | chr7_3:21565393-21565412 | None:intergenic | 25.0% |
| !! | AGTTGATCTTAATGATTTGT+TGG | + | chr7_3:21565431-21565450 | Msa1096750:intron | 25.0% |
| ! | TTTATTTACTGAATTGTGAG+TGG | + | chr7_3:21565454-21565473 | Msa1096750:intron | 25.0% |
| ! | AGTTTATAAATGCATAACTC+TGG | + | chr7_3:21565556-21565575 | Msa1096750:intron | 25.0% |
| ! | ATGTAGTTATTTAAATCGGA+AGG | + | chr7_3:21565744-21565763 | Msa1096750:intron | 25.0% |
| ! | TAAATTCATATCCGATTGAA+GGG | + | chr7_3:21565852-21565871 | Msa1096750:intron | 25.0% |
| !! | TTTAATTTCTTACTTGATGG+GGG | + | chr7_3:21565926-21565945 | Msa1096750:intron | 25.0% |
| ! | CAATAATATGTCTTCATACA+CGG | + | chr7_3:21566006-21566025 | Msa1096750:intron | 25.0% |
| !! | TGTCTTCTTTAAAAATGCAT+TGG | + | chr7_3:21566036-21566055 | Msa1096750:intron | 25.0% |
| ! | AACAATGAATGTTTCTCAAT+GGG | + | chr7_3:21566312-21566331 | Msa1096750:CDS | 25.0% |
| ! | CAAAATTTAGAGATGTTGAA+GGG | - | chr7_3:21566540-21566559 | None:intergenic | 25.0% |
| !! | AACATATTTTATCAATGGGT+CGG | + | chr7_3:21566791-21566810 | Msa1096750:CDS | 25.0% |
| ! | GATGGAAATTTCATAACAAT+GGG | + | chr7_3:21566829-21566848 | Msa1096750:CDS | 25.0% |
| ! | TAAAAACAAAGAACCAAAGA+CGG | + | chr7_3:21567284-21567303 | Msa1096750:CDS | 25.0% |
| !! | ACAAACTTTTGACATTTGAA+GGG | - | chr7_3:21567335-21567354 | None:intergenic | 25.0% |
| !! | AACAAACTTTTGACATTTGA+AGG | - | chr7_3:21567336-21567355 | None:intergenic | 25.0% |
| ! | TAAAATATTGTACATGGTCA+AGG | + | chr7_3:21567385-21567404 | Msa1096750:CDS | 25.0% |
| ! | AAAATATTGTACATGGTCAA+GGG | + | chr7_3:21567386-21567405 | Msa1096750:CDS | 25.0% |
| !! | AAAACTTTTGATGTTCTCAT+TGG | + | chr7_3:21567478-21567497 | Msa1096750:intron | 25.0% |
| ! | TTGTAGATATGTAACTTCTT+TGG | + | chr7_3:21568099-21568118 | Msa1096750:three_prime_UTR | 25.0% |
| !! | TTTTTGCAAATGGGTTTTTG+TGG | - | chr7_3:21564567-21564586 | None:intergenic | 30.0% |
| ! | GATTCCATTTTCTCATTTCT+AGG | + | chr7_3:21564722-21564741 | Msa1096750:intron | 30.0% |
| GAAACCTAGAAATGAGAAAA+TGG | - | chr7_3:21564729-21564748 | None:intergenic | 30.0% | |
| ! | ATGTTTCTACGTTTAGAGAA+TGG | + | chr7_3:21564930-21564949 | Msa1096750:intron | 30.0% |
| TATTAGATGTGTCAACGTAT+CGG | + | chr7_3:21565147-21565166 | Msa1096750:intron | 30.0% | |
| GATTTATAAATAGCGCTCTA+TGG | + | chr7_3:21565485-21565504 | Msa1096750:intron | 30.0% | |
| CTAAATTCATATCCGATTGA+AGG | + | chr7_3:21565851-21565870 | Msa1096750:intron | 30.0% | |
| !! | CTTTGTGAATTGTGTTGATT+CGG | + | chr7_3:21565949-21565968 | Msa1096750:intron | 30.0% |
| AAGATAAGCATTCTAAGCTA+TGG | + | chr7_3:21566091-21566110 | Msa1096750:intron | 30.0% | |
| CAACAATGAATGTTTCTCAA+TGG | + | chr7_3:21566311-21566330 | Msa1096750:CDS | 30.0% | |
| GATAAAAACATTCCGTCAAT+TGG | + | chr7_3:21566421-21566440 | Msa1096750:CDS | 30.0% | |
| ATATTTCCACTTCCAATTGA+CGG | - | chr7_3:21566436-21566455 | None:intergenic | 30.0% | |
| TGGAAGTGGAAATATAAACA+TGG | + | chr7_3:21566441-21566460 | Msa1096750:CDS | 30.0% | |
| GGAAGTGGAAATATAAACAT+GGG | + | chr7_3:21566442-21566461 | Msa1096750:CDS | 30.0% | |
| !! | AATGATTTTGGGAATCAGTA+TGG | + | chr7_3:21566469-21566488 | Msa1096750:CDS | 30.0% |
| ! | TATGGTAATGATTCGTCTAT+CGG | + | chr7_3:21566487-21566506 | Msa1096750:CDS | 30.0% |
| CCAAAATTTAGAGATGTTGA+AGG | - | chr7_3:21566541-21566560 | None:intergenic | 30.0% | |
| ! | CCTTCAACATCTCTAAATTT+TGG | + | chr7_3:21566538-21566557 | Msa1096750:CDS | 30.0% |
| ! | TCAACATCTCTAAATTTTGG+TGG | + | chr7_3:21566541-21566560 | Msa1096750:CDS | 30.0% |
| !! | CTCTAAATTTTGGTGGTATA+AGG | + | chr7_3:21566548-21566567 | Msa1096750:CDS | 30.0% |
| AATATATTGTTATCAGCTGC+TGG | - | chr7_3:21566616-21566635 | None:intergenic | 30.0% | |
| CGATGGAAATTTCATAACAA+TGG | + | chr7_3:21566828-21566847 | Msa1096750:CDS | 30.0% | |
| GATGACAATTTGATATCTCT+AGG | + | chr7_3:21566871-21566890 | Msa1096750:CDS | 30.0% | |
| ATGAAAACCTCCAAAAGAAA+TGG | - | chr7_3:21567094-21567113 | None:intergenic | 30.0% | |
| AGAACTATTAATCATTCCAG+TGG | - | chr7_3:21567139-21567158 | None:intergenic | 30.0% | |
| !! | TAATAGTTCTGATCCGTTAA+TGG | + | chr7_3:21567149-21567168 | Msa1096750:CDS | 30.0% |
| !! | AATAGTTCTGATCCGTTAAT+GGG | + | chr7_3:21567150-21567169 | Msa1096750:CDS | 30.0% |
| !! | TTGTCAACTGGTATTTTTGA+TGG | + | chr7_3:21567354-21567373 | Msa1096750:CDS | 30.0% |
| TTCCGGTAAAATATTGTACA+TGG | + | chr7_3:21567379-21567398 | Msa1096750:CDS | 30.0% | |
| ! | GACCATGTACAATATTTTAC+CGG | - | chr7_3:21567384-21567403 | None:intergenic | 30.0% |
| AATCTTCAAGGAGTCATAAA+AGG | + | chr7_3:21567507-21567526 | Msa1096750:CDS | 30.0% | |
| ! | AATTTTTGCAGATCATTGCT+AGG | - | chr7_3:21567657-21567676 | None:intergenic | 30.0% |
| TCAAAGAATATGTGACTGTT+AGG | - | chr7_3:21567742-21567761 | None:intergenic | 30.0% | |
| ! | AGTCACATATTCTTTGAGAA+TGG | + | chr7_3:21567745-21567764 | Msa1096750:CDS | 30.0% |
| GACTTTAATATCTGATGCAA+GGG | - | chr7_3:21567922-21567941 | None:intergenic | 30.0% | |
| TGACTTTAATATCTGATGCA+AGG | - | chr7_3:21567923-21567942 | None:intergenic | 30.0% | |
| ! | TTCTTTCTCTTGTAATTTGC+TGG | + | chr7_3:21568242-21568261 | Msa1096750:three_prime_UTR | 30.0% |
| GATGGATCAAAGATATAGTG+CGG | - | chr7_3:21564545-21564564 | None:intergenic | 35.0% | |
| ! | TTCTTCAGTGTCACTATCAA+CGG | + | chr7_3:21564604-21564623 | Msa1096750:intron | 35.0% |
| !! | GTGTAGTTGATCGATTTTGA+AGG | + | chr7_3:21564849-21564868 | Msa1096750:intron | 35.0% |
| TACATTCAAAGAGAGAGAGA+TGG | + | chr7_3:21564906-21564925 | Msa1096750:intron | 35.0% | |
| AAGTAGTGTCTGTGATTCAT+AGG | - | chr7_3:21565040-21565059 | None:intergenic | 35.0% | |
| TATGAATCACAGACACTACT+TGG | + | chr7_3:21565039-21565058 | Msa1096750:intron | 35.0% | |
| ATGAATCACAGACACTACTT+GGG | + | chr7_3:21565040-21565059 | Msa1096750:intron | 35.0% | |
| ATTCAGTGAAGTATGTGTGT+CGG | - | chr7_3:21565109-21565128 | None:intergenic | 35.0% | |
| CATTGCATACCTAATGTATC+CGG | - | chr7_3:21565294-21565313 | None:intergenic | 35.0% | |
| !! | TTGTTTTGCGAGGTTAAACT+TGG | + | chr7_3:21565581-21565600 | Msa1096750:intron | 35.0% |
| ! | TGTTTTGCGAGGTTAAACTT+GGG | + | chr7_3:21565582-21565601 | Msa1096750:intron | 35.0% |
| AATGTGTGATGTTAACACAG+AGG | + | chr7_3:21565640-21565659 | Msa1096750:intron | 35.0% | |
| CATTTCAGAATAAAGGCTTC+TGG | + | chr7_3:21566125-21566144 | Msa1096750:CDS | 35.0% | |
| TGCATAGCTGAAGAAAATGT+TGG | + | chr7_3:21566166-21566185 | Msa1096750:CDS | 35.0% | |
| TTCTTGTTGCTGAACATTTG+AGG | - | chr7_3:21566256-21566275 | None:intergenic | 35.0% | |
| AACAAGAAACAAGCAGTTGA+AGG | + | chr7_3:21566268-21566287 | Msa1096750:CDS | 35.0% | |
| !!! | TTTTTGGATCTGGTCTTGTA+CGG | + | chr7_3:21566383-21566402 | Msa1096750:CDS | 35.0% |
| GTGGAAATATAAACATGGGA+AGG | + | chr7_3:21566446-21566465 | Msa1096750:CDS | 35.0% | |
| ! | AACATGGGAAGGAATGATTT+TGG | + | chr7_3:21566457-21566476 | Msa1096750:CDS | 35.0% |
| ! | ACATGGGAAGGAATGATTTT+GGG | + | chr7_3:21566458-21566477 | Msa1096750:CDS | 35.0% |
| CACTTCCATTGTTATACGTT+GGG | - | chr7_3:21566687-21566706 | None:intergenic | 35.0% | |
| TCACTTCCATTGTTATACGT+TGG | - | chr7_3:21566688-21566707 | None:intergenic | 35.0% | |
| ATGGGTCACATCTTCAATAA+AGG | + | chr7_3:21566721-21566740 | Msa1096750:CDS | 35.0% | |
| TGGGTCACATCTTCAATAAA+GGG | + | chr7_3:21566722-21566741 | Msa1096750:CDS | 35.0% | |
| ACATCTTCAATAAAGGGGAA+GGG | + | chr7_3:21566728-21566747 | Msa1096750:CDS | 35.0% | |
| !!! | GAAGGGAGTTTTTTGTTGAT+GGG | + | chr7_3:21566745-21566764 | Msa1096750:CDS | 35.0% |
| ATAACAATGGGTCAGTCATA+TGG | + | chr7_3:21566841-21566860 | Msa1096750:CDS | 35.0% | |
| AGTTTCTCCTGATTTACCAT+AGG | - | chr7_3:21566944-21566963 | None:intergenic | 35.0% | |
| AGGAGAAACTTTCACAACTA+TGG | + | chr7_3:21566954-21566973 | Msa1096750:CDS | 35.0% | |
| GTTTGATTCCACCTTATCAT+AGG | - | chr7_3:21566986-21567005 | None:intergenic | 35.0% | |
| ! | ACAATTCCATCTTTTGACAG+CGG | + | chr7_3:21567015-21567034 | Msa1096750:CDS | 35.0% |
| !! | TGCTATTTACAGGTGGATTA+GGG | - | chr7_3:21567230-21567249 | None:intergenic | 35.0% |
| !!! | GATTTTGGAGTGCTATTTAC+AGG | - | chr7_3:21567240-21567259 | None:intergenic | 35.0% |
| !! | GTCAAAAGTTTGTTGTCAAC+TGG | + | chr7_3:21567342-21567361 | Msa1096750:CDS | 35.0% |
| !! | TGGTATTTTTGATGGCATTC+CGG | + | chr7_3:21567362-21567381 | Msa1096750:CDS | 35.0% |
| CATTGGCAGAAAAATCTTCA+AGG | + | chr7_3:21567495-21567514 | Msa1096750:intron | 35.0% | |
| AAGGAGTCATAAAAGGAACT+GGG | + | chr7_3:21567514-21567533 | Msa1096750:CDS | 35.0% | |
| TGTTCATGTGATATCTGCAA+GGG | + | chr7_3:21567543-21567562 | Msa1096750:CDS | 35.0% | |
| CTGCAAAAATTCTGTCATGA+AGG | + | chr7_3:21567666-21567685 | Msa1096750:intron | 35.0% | |
| !!! | ACTGTTAGGATGTTTTGACT+TGG | - | chr7_3:21567728-21567747 | None:intergenic | 35.0% |
| !! | AAAGTTCCTTTGGTTGATAG+TGG | - | chr7_3:21567854-21567873 | None:intergenic | 35.0% |
| CTTTCGTACTTGGAAATGTA+AGG | + | chr7_3:21567870-21567889 | Msa1096750:intron | 35.0% | |
| GAACATAACCGAACTTATCA+TGG | - | chr7_3:21568062-21568081 | None:intergenic | 35.0% | |
| ! | TAACTTCTTTGGTGTATCAG+TGG | + | chr7_3:21568110-21568129 | Msa1096750:three_prime_UTR | 35.0% |
| !! | TGCAAATGGGTTTTTGTGGA+TGG | - | chr7_3:21564563-21564582 | None:intergenic | 40.0% |
| !! | AACTCTGGTATTGTTTTGCG+AGG | + | chr7_3:21565571-21565590 | Msa1096750:intron | 40.0% |
| ACTTGTGTGCATGCTTGAAA+TGG | + | chr7_3:21565676-21565695 | Msa1096750:intron | 40.0% | |
| ! | TGCATGCTTGAAATGGATTC+TGG | + | chr7_3:21565683-21565702 | Msa1096750:intron | 40.0% |
| AACCAAAGAGAAGTCATCAG+TGG | + | chr7_3:21566212-21566231 | Msa1096750:CDS | 40.0% | |
| AACCACTGATGACTTCTCTT+TGG | - | chr7_3:21566217-21566236 | None:intergenic | 40.0% | |
| TTCTCAATGGGAAACCAGTT+CGG | + | chr7_3:21566324-21566343 | Msa1096750:CDS | 40.0% | |
| CAAAAAGACGGTCAGACAAT+TGG | - | chr7_3:21566369-21566388 | None:intergenic | 40.0% | |
| ! | CAATTGTCTGACCGTCTTTT+TGG | + | chr7_3:21566367-21566386 | Msa1096750:CDS | 40.0% |
| CAAGACCAGATCCAAAAAGA+CGG | - | chr7_3:21566381-21566400 | None:intergenic | 40.0% | |
| AACATTCCGTCAATTGGAAG+TGG | + | chr7_3:21566427-21566446 | Msa1096750:CDS | 40.0% | |
| TCAGACCCAACGTATAACAA+TGG | + | chr7_3:21566679-21566698 | Msa1096750:CDS | 40.0% | |
| AAGTGACAACACCATTGCTA+TGG | + | chr7_3:21566702-21566721 | Msa1096750:CDS | 40.0% | |
| AGTGACAACACCATTGCTAT+GGG | + | chr7_3:21566703-21566722 | Msa1096750:CDS | 40.0% | |
| GGGTCACATCTTCAATAAAG+GGG | + | chr7_3:21566723-21566742 | Msa1096750:CDS | 40.0% | |
| CACATCTTCAATAAAGGGGA+AGG | + | chr7_3:21566727-21566746 | Msa1096750:CDS | 40.0% | |
| !!! | GGAAGGGAGTTTTTTGTTGA+TGG | + | chr7_3:21566744-21566763 | Msa1096750:CDS | 40.0% |
| ! | TTGTTGATGGGTCACAATCA+TGG | + | chr7_3:21566757-21566776 | Msa1096750:CDS | 40.0% |
| AATGGGTCAGTCATATGGAA+AGG | + | chr7_3:21566846-21566865 | Msa1096750:CDS | 40.0% | |
| TCTAGGAACCTCATATTCCA+TGG | + | chr7_3:21566888-21566907 | Msa1096750:CDS | 40.0% | |
| CTAGGAACCTCATATTCCAT+GGG | + | chr7_3:21566889-21566908 | Msa1096750:CDS | 40.0% | |
| TAGGAACCTCATATTCCATG+GGG | + | chr7_3:21566890-21566909 | Msa1096750:CDS | 40.0% | |
| !! | CATGAGAGCGTTACATCAAT+GGG | + | chr7_3:21566913-21566932 | Msa1096750:CDS | 40.0% |
| TCTCCTGATTTACCATAGGT+TGG | - | chr7_3:21566940-21566959 | None:intergenic | 40.0% | |
| TATGGCTCCTTCCTATGATA+AGG | + | chr7_3:21566972-21566991 | Msa1096750:CDS | 40.0% | |
| GATTCCACCTTATCATAGGA+AGG | - | chr7_3:21566982-21567001 | None:intergenic | 40.0% | |
| !!! | TTACTCAGGTTTTGACTCAC+AGG | - | chr7_3:21567057-21567076 | None:intergenic | 40.0% |
| AACTGCTGTGACAATTACTC+AGG | - | chr7_3:21567071-21567090 | None:intergenic | 40.0% | |
| ! | CACAGCAGTTCCATTTCTTT+TGG | + | chr7_3:21567081-21567100 | Msa1096750:CDS | 40.0% |
| ! | AGCAGTTCCATTTCTTTTGG+AGG | + | chr7_3:21567084-21567103 | Msa1096750:CDS | 40.0% |
| TTGATTCACTCAGATCCTTC+TGG | - | chr7_3:21567206-21567225 | None:intergenic | 40.0% | |
| !! | GTGCTATTTACAGGTGGATT+AGG | - | chr7_3:21567231-21567250 | None:intergenic | 40.0% |
| !! | TTTGGAGTGCTATTTACAGG+TGG | - | chr7_3:21567237-21567256 | None:intergenic | 40.0% |
| ATATTGTACATGGTCAAGGG+AGG | + | chr7_3:21567389-21567408 | Msa1096750:CDS | 40.0% | |
| CAAGGAGTCATAAAAGGAAC+TGG | + | chr7_3:21567513-21567532 | Msa1096750:CDS | 40.0% | |
| TGCAGATATCACATGAACAC+AGG | - | chr7_3:21567542-21567561 | None:intergenic | 40.0% | |
| GTGTTCATGTGATATCTGCA+AGG | + | chr7_3:21567542-21567561 | Msa1096750:CDS | 40.0% | |
| GTTCATGTGATATCTGCAAG+GGG | + | chr7_3:21567544-21567563 | Msa1096750:CDS | 40.0% | |
| TATGCATGAGCACTATTGCT+AGG | - | chr7_3:21567619-21567638 | None:intergenic | 40.0% | |
| CTCTTGAACAACAGCATAGA+CGG | - | chr7_3:21567776-21567795 | None:intergenic | 40.0% | |
| ! | GCATCAAAAAGCATATCCTG+AGG | - | chr7_3:21567811-21567830 | None:intergenic | 40.0% |
| GATGCTATTCAAACTGTGAC+AGG | + | chr7_3:21567826-21567845 | Msa1096750:CDS | 40.0% | |
| ACCAAAGGAACTTTCGTACT+TGG | + | chr7_3:21567860-21567879 | Msa1096750:CDS | 40.0% | |
| TCCAAGTACGAAAGTTCCTT+TGG | - | chr7_3:21567864-21567883 | None:intergenic | 40.0% | |
| TTGGTATGATGCTGAAAAGG+AGG | - | chr7_3:21567991-21568010 | None:intergenic | 40.0% | |
| AGCTTGGTATGATGCTGAAA+AGG | - | chr7_3:21567994-21568013 | None:intergenic | 40.0% | |
| AGCTGCTACCATGATAAGTT+CGG | + | chr7_3:21568051-21568070 | Msa1096750:exon | 40.0% | |
| GACACGTGTACGGTTAGATA+AGG | + | chr7_3:21564493-21564512 | Msa1096750:intron | 45.0% | |
| ! | TTCAGTGTCACTATCAACGG+CGG | + | chr7_3:21564607-21564626 | Msa1096750:intron | 45.0% |
| AAATTCTCCGGCGTTAGTTC+CGG | + | chr7_3:21564645-21564664 | Msa1096750:CDS | 45.0% | |
| TCACAGACACTACTTGGGTT+AGG | + | chr7_3:21565045-21565064 | Msa1096750:intron | 45.0% | |
| TAAGACGAGAGCCCTTCAAT+CGG | - | chr7_3:21565866-21565885 | None:intergenic | 45.0% | |
| AAGGGCTCTCGTCTTAAGAA+AGG | + | chr7_3:21565870-21565889 | Msa1096750:intron | 45.0% | |
| AGCTATGCAACCAACTTCTC+GGG | - | chr7_3:21566155-21566174 | None:intergenic | 45.0% | |
| CAGCTATGCAACCAACTTCT+CGG | - | chr7_3:21566156-21566175 | None:intergenic | 45.0% | |
| GAGAAGTCATCAGTGGTTTG+TGG | + | chr7_3:21566219-21566238 | Msa1096750:CDS | 45.0% | |
| !! | CAGTTGAAGGTGTTAGTGAC+AGG | + | chr7_3:21566281-21566300 | Msa1096750:CDS | 45.0% |
| TCTCAATGGGAAACCAGTTC+GGG | + | chr7_3:21566325-21566344 | Msa1096750:CDS | 45.0% | |
| ! | TCTGACCGTCTTTTTGGATC+TGG | + | chr7_3:21566373-21566392 | Msa1096750:CDS | 45.0% |
| CTGTCAATGTCTCATTCCAC+AGG | + | chr7_3:21566511-21566530 | Msa1096750:CDS | 45.0% | |
| TCAATGTCTCATTCCACAGG+AGG | + | chr7_3:21566514-21566533 | Msa1096750:CDS | 45.0% | |
| CAAGTCAGAGATTCTGACCA+TGG | + | chr7_3:21566586-21566605 | Msa1096750:CDS | 45.0% | |
| GAAGATGTGACCCATAGCAA+TGG | - | chr7_3:21566716-21566735 | None:intergenic | 45.0% | |
| !! | GCATGAGAGCGTTACATCAA+TGG | + | chr7_3:21566912-21566931 | Msa1096750:CDS | 45.0% |
| ACATCAATGGGTCCAACCTA+TGG | + | chr7_3:21566925-21566944 | Msa1096750:CDS | 45.0% | |
| GGTCCAACCTATGGTAAATC+AGG | + | chr7_3:21566934-21566953 | Msa1096750:CDS | 45.0% | |
| CAGTGGAGTCATTCAGTTGA+GGG | - | chr7_3:21567122-21567141 | None:intergenic | 45.0% | |
| ! | GAGTTCTGGTTGCCCATTAA+CGG | - | chr7_3:21567165-21567184 | None:intergenic | 45.0% |
| GAAGGGAAGCTGTTAGTAGA+AGG | - | chr7_3:21567318-21567337 | None:intergenic | 45.0% | |
| TGATATCTGCAAGGGGCAAA+AGG | + | chr7_3:21567551-21567570 | Msa1096750:CDS | 45.0% | |
| TATGAATTTGAGCGTCACGC+TGG | + | chr7_3:21567700-21567719 | Msa1096750:CDS | 45.0% | |
| ATGAATTTGAGCGTCACGCT+GGG | + | chr7_3:21567701-21567720 | Msa1096750:CDS | 45.0% | |
| AGAGCTGAAAAACAGTCCTC+AGG | + | chr7_3:21567792-21567811 | Msa1096750:CDS | 45.0% | |
| !! | TAAAAAAATTAAATAAAGAA+TGG | - | chr7_3:21565367-21565386 | None:intergenic | 5.0% |
| !! | ACAAGTTGGAGGCACCAAAC+CGG | - | chr7_3:21564667-21564686 | None:intergenic | 50.0% |
| CACGGACATTGGAAACGACA+CGG | - | chr7_3:21565176-21565195 | None:intergenic | 50.0% | |
| ATGAAGCACAGCTACGGACA+CGG | - | chr7_3:21565194-21565213 | None:intergenic | 50.0% | |
| TGTCCGTAGCTGTGCTTCAT+AGG | + | chr7_3:21565194-21565213 | Msa1096750:intron | 50.0% | |
| CCACCTATGAAGCACAGCTA+CGG | - | chr7_3:21565200-21565219 | None:intergenic | 50.0% | |
| AGGAAGGCTCAGAAGACAGA+TGG | - | chr7_3:21565900-21565919 | None:intergenic | 50.0% | |
| GCTATGCAACCAACTTCTCG+GGG | - | chr7_3:21566154-21566173 | None:intergenic | 50.0% | |
| CAGACAATTGGCCAGTGACT+GGG | - | chr7_3:21566357-21566376 | None:intergenic | 50.0% | |
| TCAGACAATTGGCCAGTGAC+TGG | - | chr7_3:21566358-21566377 | None:intergenic | 50.0% | |
| GATGGGTCACAATCATGGCA+AGG | + | chr7_3:21566762-21566781 | Msa1096750:CDS | 50.0% | |
| AATGGGTCGGTCCTTTGACA+GGG | + | chr7_3:21566804-21566823 | Msa1096750:CDS | 50.0% | |
| ATTTCCATCGCCCCTGTCAA+AGG | - | chr7_3:21566818-21566837 | None:intergenic | 50.0% | |
| CTCATGCCCCATGGAATATG+AGG | - | chr7_3:21566899-21566918 | None:intergenic | 50.0% | |
| GGCTCCTTCCTATGATAAGG+TGG | + | chr7_3:21566975-21566994 | Msa1096750:CDS | 50.0% | |
| GAGTTGCCGCTGTCAAAAGA+TGG | - | chr7_3:21567024-21567043 | None:intergenic | 50.0% | |
| CCAGTGGAGTCATTCAGTTG+AGG | - | chr7_3:21567123-21567142 | None:intergenic | 50.0% | |
| CCTCAACTGAATGACTCCAC+TGG | + | chr7_3:21567120-21567139 | Msa1096750:CDS | 50.0% | |
| CAACACCTTGAGCTGAGTTC+TGG | - | chr7_3:21567179-21567198 | None:intergenic | 50.0% | |
| !! | TCAAGGTGTTGACAGCCAGA+AGG | + | chr7_3:21567188-21567207 | Msa1096750:CDS | 50.0% |
| TGAATTTGAGCGTCACGCTG+GGG | + | chr7_3:21567702-21567721 | Msa1096750:CDS | 50.0% | |
| CAGGAGCCACTATCAACCAA+AGG | + | chr7_3:21567845-21567864 | Msa1096750:CDS | 50.0% | |
| ! | TCTGATGCAAGGGTGTGCTT+GGG | - | chr7_3:21567912-21567931 | None:intergenic | 50.0% |
| ! | ATCTGATGCAAGGGTGTGCT+TGG | - | chr7_3:21567913-21567932 | None:intergenic | 50.0% |
| GAAGCTCAAGAGTAGCAGCT+TGG | - | chr7_3:21568010-21568029 | None:intergenic | 50.0% | |
| CTTGAGCTTCAGCGCATCTA+TGG | + | chr7_3:21568020-21568039 | Msa1096750:CDS | 50.0% | |
| GCTTCAGCGCATCTATGGAA+AGG | + | chr7_3:21568025-21568044 | Msa1096750:CDS | 50.0% | |
| AACGCCGGAGAATTTCCCGA+CGG | - | chr7_3:21564640-21564659 | None:intergenic | 55.0% | |
| CACCAAACCGGAACTAACGC+CGG | - | chr7_3:21564655-21564674 | None:intergenic | 55.0% | |
| ACAGCTACGGACACGGACAT+TGG | - | chr7_3:21565187-21565206 | None:intergenic | 55.0% | |
| CCGTAGCTGTGCTTCATAGG+TGG | + | chr7_3:21565197-21565216 | Msa1096750:intron | 55.0% | |
| !! | TTCTGGAGTCCCCGAGAAGT+TGG | + | chr7_3:21566142-21566161 | Msa1096750:CDS | 55.0% |
| GACTGGGTGAAATCCCGAAC+TGG | - | chr7_3:21566341-21566360 | None:intergenic | 55.0% | |
| TCGGGATTTCACCCAGTCAC+TGG | + | chr7_3:21566343-21566362 | Msa1096750:CDS | 55.0% | |
| AGATGTTGAAGGGCCTCCTG+TGG | - | chr7_3:21566530-21566549 | None:intergenic | 55.0% | |
| CAATGGGTCGGTCCTTTGAC+AGG | + | chr7_3:21566803-21566822 | Msa1096750:CDS | 55.0% | |
| ATGGGTCGGTCCTTTGACAG+GGG | + | chr7_3:21566805-21566824 | Msa1096750:CDS | 55.0% | |
| TGTAACGCTCTCATGCCCCA+TGG | - | chr7_3:21566908-21566927 | None:intergenic | 55.0% | |
| GGCAACCAGAACTCAGCTCA+AGG | + | chr7_3:21567171-21567190 | Msa1096750:CDS | 55.0% | |
| GAAGGCTTCTTCGCCGTCTT+TGG | - | chr7_3:21567300-21567319 | None:intergenic | 55.0% | |
| GCCACCGTCGGGAAATTCTC+CGG | + | chr7_3:21564633-21564652 | Msa1096750:CDS | 60.0% | |
| CTCCGGCGTTAGTTCCGGTT+TGG | + | chr7_3:21564650-21564669 | Msa1096750:intron | 60.0% | |
| TATCAGCTGCTGGCGTGCCA+TGG | - | chr7_3:21566606-21566625 | None:intergenic | 60.0% | |
| GCCGGAGAATTTCCCGACGG+TGG | - | chr7_3:21564637-21564656 | None:intergenic | 65.0% | |
| CGGTCCTTTGACAGGGGCGA+TGG | + | chr7_3:21566811-21566830 | Msa1096750:CDS | 65.0% | |
| CAACGGCGGAACGCCACCGT+CGG | + | chr7_3:21564621-21564640 | Msa1096750:CDS | 70.0% | |
| AACGGCGGAACGCCACCGTC+GGG | + | chr7_3:21564622-21564641 | Msa1096750:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 21564491 | 21568297 | 21564491 | ID=Msa1096750;Name=Msa1096750 |
| chr7_3 | mRNA | 21564491 | 21568297 | 21564491 | ID=Msa1096750-mRNA-1;Parent=Msa1096750;Name=Msa1096750-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.6|0.66|0.83|0.6|0.66|6|233|562 |
| chr7_3 | exon | 21564491 | 21564504 | 21564491 | ID=Msa1096750-mRNA-1:exon:4689;Parent=Msa1096750-mRNA-1 |
| chr7_3 | exon | 21564612 | 21564666 | 21564612 | ID=Msa1096750-mRNA-1:exon:4690;Parent=Msa1096750-mRNA-1 |
| chr7_3 | exon | 21566124 | 21567410 | 21566124 | ID=Msa1096750-mRNA-1:exon:4691;Parent=Msa1096750-mRNA-1 |
| chr7_3 | exon | 21567504 | 21567572 | 21567504 | ID=Msa1096750-mRNA-1:exon:4692;Parent=Msa1096750-mRNA-1 |
| chr7_3 | exon | 21567688 | 21567886 | 21567688 | ID=Msa1096750-mRNA-1:exon:4693;Parent=Msa1096750-mRNA-1 |
| chr7_3 | exon | 21568000 | 21568297 | 21568000 | ID=Msa1096750-mRNA-1:exon:4694;Parent=Msa1096750-mRNA-1 |
| chr7_3 | CDS | 21564491 | 21564504 | 21564491 | ID=Msa1096750-mRNA-1:cds;Parent=Msa1096750-mRNA-1 |
| chr7_3 | CDS | 21564612 | 21564666 | 21564612 | ID=Msa1096750-mRNA-1:cds;Parent=Msa1096750-mRNA-1 |
| chr7_3 | CDS | 21566124 | 21567410 | 21566124 | ID=Msa1096750-mRNA-1:cds;Parent=Msa1096750-mRNA-1 |
| chr7_3 | CDS | 21567504 | 21567572 | 21567504 | ID=Msa1096750-mRNA-1:cds;Parent=Msa1096750-mRNA-1 |
| chr7_3 | CDS | 21567688 | 21567886 | 21567688 | ID=Msa1096750-mRNA-1:cds;Parent=Msa1096750-mRNA-1 |
| chr7_3 | CDS | 21568000 | 21568064 | 21568000 | ID=Msa1096750-mRNA-1:cds;Parent=Msa1096750-mRNA-1 |
| chr7_3 | three_prime_UTR | 21568065 | 21568297 | 21568065 | ID=Msa1096750-mRNA-1:three_prime_utr;Parent=Msa1096750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
