Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101080 | AES80779.2 | 99.676 | 309 | 1 | 0 | 1 | 309 | 1 | 309 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101080 | sp|Q8GUL2|MOS14_ARATH | 29.393 | 313 | 189 | 9 | 1 | 299 | 1 | 295 | 2.66e-22 | 101 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101080 | G7KYC8 | 99.676 | 309 | 1 | 0 | 1 | 309 | 1 | 309 | 0.0 | 635 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1101080 | Msa1445950 | 0.800701 | 1.273817e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101080 | MtrunA17_Chr7g0252711 | 99.676 | 309 | 1 | 0 | 1 | 309 | 1 | 309 | 0.0 | 634 |
| Msa1101080 | MtrunA17_Chr4g0059761 | 27.950 | 322 | 199 | 9 | 1 | 309 | 1 | 302 | 3.14e-19 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101080 | AT1G12930.1 | 59.941 | 337 | 118 | 5 | 1 | 334 | 1 | 323 | 5.02e-102 | 322 |
| Msa1101080 | AT5G62600.1 | 29.393 | 313 | 189 | 9 | 1 | 299 | 1 | 295 | 2.71e-23 | 101 |
Find 101 sgRNAs with CRISPR-Local
Find 546 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGCTTGTTATCAGAAAT+TGG | 0.123526 | 7_3:+31619400 | Msa1101080:CDS |
| TAAATAAATAAAATAATAAT+TGG | 0.147593 | 7_3:-31615833 | None:intergenic |
| GTACTCTGCATAACAAAATT+TGG | 0.169643 | 7_3:-31619309 | None:intergenic |
| TTAATATAAATTCATACTTA+TGG | 0.203297 | 7_3:+31619702 | Msa1101080:three_prime_UTR |
| GAAGAATTCGAGTTCGAAAT+TGG | 0.258169 | 7_3:-31616048 | None:intergenic |
| TAAGTATGAATTTATATTAA+AGG | 0.273677 | 7_3:-31619699 | None:intergenic |
| TACTCTGCATAACAAAATTT+GGG | 0.287271 | 7_3:-31619308 | None:intergenic |
| TAATATAAATTCATACTTAT+GGG | 0.294961 | 7_3:+31619703 | Msa1101080:three_prime_UTR |
| CCATAGCCGTCCGATGAATT+AGG | 0.296757 | 7_3:+31615717 | Msa1101080:five_prime_UTR |
| TAACAGAATCCTTCCTTTCC+AGG | 0.302673 | 7_3:+31615756 | Msa1101080:five_prime_UTR |
| TCTCTTCACTCTGCAGATTC+CGG | 0.317112 | 7_3:-31617967 | None:intergenic |
| AAATAAATAAAATAATAATT+GGG | 0.320851 | 7_3:-31615832 | None:intergenic |
| ATTCGCCGCGACGCGGTTGC+AGG | 0.327549 | 7_3:-31615943 | None:intergenic |
| AGGGGAGACATGAAAGTAAT+TGG | 0.330539 | 7_3:+31619370 | Msa1101080:CDS |
| TAATCATACAACAAACAAAA+AGG | 0.346032 | 7_3:-31619488 | None:intergenic |
| TTGTATGATTAATTAATGTA+AGG | 0.364227 | 7_3:+31619500 | Msa1101080:exon |
| GGGTGAGCTGCCAATGTTCC+TGG | 0.373977 | 7_3:-31618642 | None:intergenic |
| TCAAAACCTCTTGGGTATAG+TGG | 0.375369 | 7_3:-31618087 | None:intergenic |
| TGCTTCTCTGAAATTTCTCC+AGG | 0.385040 | 7_3:+31618624 | Msa1101080:CDS |
| CATGCTTGTTATCAGAAATT+GGG | 0.386883 | 7_3:+31619401 | Msa1101080:CDS |
| CTAATTCATCGGACGGCTAT+GGG | 0.394554 | 7_3:-31615716 | None:intergenic |
| TAACAAGTGGGCACTTGTTA+AGG | 0.395045 | 7_3:-31619670 | None:intergenic |
| TGACACAGCGAGTGAGGGTT+TGG | 0.398973 | 7_3:-31615665 | None:intergenic |
| TCTTGTGTTTAGGTTAGAGC+TGG | 0.422154 | 7_3:+31618600 | Msa1101080:intron |
| GGGAAGAGAGTGATGAATGA+TGG | 0.430905 | 7_3:-31615797 | None:intergenic |
| CCTAATTCATCGGACGGCTA+TGG | 0.431969 | 7_3:-31615717 | None:intergenic |
| TAAATGTAGAAATTTAATCT+TGG | 0.433513 | 7_3:+31619563 | Msa1101080:three_prime_UTR |
| TTCAACAAACTCATGCCGCC+TGG | 0.440539 | 7_3:+31615982 | Msa1101080:CDS |
| GCATTTAACAAAGCGTCCTT+AGG | 0.442313 | 7_3:-31617683 | None:intergenic |
| CAAAAGTTTCAAAACCTCTT+GGG | 0.447354 | 7_3:-31618095 | None:intergenic |
| GGAGATGCTCACTGTGCTGC+CGG | 0.449680 | 7_3:+31618009 | Msa1101080:CDS |
| AAAAGGACTTTCAAAGTCCT+AGG | 0.450187 | 7_3:-31619457 | None:intergenic |
| GGTTTCCATGTGCAACAACT+TGG | 0.457164 | 7_3:-31617919 | None:intergenic |
| AGTGTATATTTGTGTTCCCT+AGG | 0.465045 | 7_3:+31619440 | Msa1101080:CDS |
| TGAAATTTCTCCAGGAACAT+TGG | 0.470187 | 7_3:+31618632 | Msa1101080:CDS |
| GAATGGCAATATTGCTGTCC+TGG | 0.470752 | 7_3:+31617988 | Msa1101080:CDS |
| ACCGCGTCGCGGCGAATCAA+TGG | 0.474420 | 7_3:+31615949 | Msa1101080:CDS |
| AATGCTAACAAGAGCACTTA+GGG | 0.478210 | 7_3:+31619525 | Msa1101080:three_prime_UTR |
| TTATTTCAGATTGCCGCAGC+AGG | 0.485770 | 7_3:-31618233 | None:intergenic |
| TAAATACAAAATTAAGAAGT+GGG | 0.487697 | 7_3:-31618662 | None:intergenic |
| AATAAATAAAATAATAATTG+GGG | 0.493494 | 7_3:-31615831 | None:intergenic |
| TTAAATACAAAATTAAGAAG+TGG | 0.495365 | 7_3:-31618663 | None:intergenic |
| GCAGCACAGTGAGCATCTCC+AGG | 0.499122 | 7_3:-31618006 | None:intergenic |
| AGAAATGGAATTGGCAATGA+AGG | 0.499778 | 7_3:+31615881 | Msa1101080:exon |
| AGAGTGATGAATGATGGAAT+TGG | 0.502385 | 7_3:-31615791 | None:intergenic |
| TGTATGATTAATTAATGTAA+GGG | 0.503527 | 7_3:+31619501 | Msa1101080:exon |
| AAATGCTAACAAGAGCACTT+AGG | 0.512270 | 7_3:+31619524 | Msa1101080:three_prime_UTR |
| ATGTCTCCCCTATTAAGAGC+TGG | 0.513020 | 7_3:-31619358 | None:intergenic |
| GCTTCTCTCTCACACACCTA+TGG | 0.513846 | 7_3:+31618200 | Msa1101080:intron |
| AAGTTCAACAAGAACTTCAA+TGG | 0.518992 | 7_3:-31618806 | None:intergenic |
| GATGTTGGTGGCGACATCCC+AGG | 0.519872 | 7_3:-31616000 | None:intergenic |
| ATTGGAGGCGTGGCGGCGAT+CGG | 0.521283 | 7_3:-31616030 | None:intergenic |
| TGGTTGTCAACAACTTCCTC+CGG | 0.523623 | 7_3:-31618028 | None:intergenic |
| TTTGCGCTGCTTATTGAGCT+GGG | 0.527225 | 7_3:+31618299 | Msa1101080:CDS |
| GAAGGTTATCTACTGCAATC+AGG | 0.529827 | 7_3:+31617659 | Msa1101080:CDS |
| ATTTAGTAGTGGTCCTCCAC+AGG | 0.531004 | 7_3:+31617727 | Msa1101080:CDS |
| AATATAAATTCATACTTATG+GGG | 0.536550 | 7_3:+31619704 | Msa1101080:three_prime_UTR |
| TTAAAGGTCATGCTAACAAG+TGG | 0.539809 | 7_3:-31619683 | None:intergenic |
| TTTGTTCCTAATTCATCGGA+CGG | 0.544676 | 7_3:-31615723 | None:intergenic |
| GCGATCGGAGGTGAGGATGT+TGG | 0.548948 | 7_3:-31616015 | None:intergenic |
| TCAACAAACTCATGCCGCCT+GGG | 0.555454 | 7_3:+31615983 | Msa1101080:CDS |
| AATTGGAAGAAGGTGACGCC+TGG | 0.559468 | 7_3:-31615774 | None:intergenic |
| AACAAGTGACACAGCGAGTG+AGG | 0.563669 | 7_3:-31615671 | None:intergenic |
| CGCTCAGATTCTCAAACGCA+AGG | 0.570678 | 7_3:+31616073 | Msa1101080:CDS |
| GAAGAAGGTGACGCCTGGAA+AGG | 0.573037 | 7_3:-31615769 | None:intergenic |
| AAGGTGACGCCTGGAAAGGA+AGG | 0.574729 | 7_3:-31615765 | None:intergenic |
| GTGCAGTACAACATAATGAA+AGG | 0.577103 | 7_3:+31618265 | Msa1101080:CDS |
| TCTACTGCAATCAGGACCTA+AGG | 0.581546 | 7_3:+31617667 | Msa1101080:CDS |
| GCCATTGATTCGCCGCGACG+CGG | 0.583957 | 7_3:-31615950 | None:intergenic |
| GAATTCGAGTTCGAAATTGG+AGG | 0.586377 | 7_3:-31616045 | None:intergenic |
| ATGGAATTGGCAATGAAGGT+AGG | 0.588524 | 7_3:+31615885 | Msa1101080:CDS |
| CGAGTTCGAAATTGGAGGCG+TGG | 0.592052 | 7_3:-31616040 | None:intergenic |
| GGAGACATGAAAGTAATTGG+TGG | 0.599112 | 7_3:+31619373 | Msa1101080:CDS |
| AGCAGGAACTCGAGAACCAT+AGG | 0.600256 | 7_3:-31618216 | None:intergenic |
| AAAGGACTTTCAAAGTCCTA+GGG | 0.600418 | 7_3:-31619456 | None:intergenic |
| GGAGGCGTGGCGGCGATCGG+AGG | 0.602618 | 7_3:-31616027 | None:intergenic |
| ATGCAGAGTACATTATCTGA+AGG | 0.610685 | 7_3:+31619321 | Msa1101080:CDS |
| CGTGGCGGCGATCGGAGGTG+AGG | 0.611006 | 7_3:-31616022 | None:intergenic |
| GTACTCCAAGTTGTTGCACA+TGG | 0.616576 | 7_3:+31617914 | Msa1101080:CDS |
| ATAAATAAAATAATAATTGG+GGG | 0.617205 | 7_3:-31615830 | None:intergenic |
| TTTCTGATAACAAGCATGCA+AGG | 0.618758 | 7_3:-31619396 | None:intergenic |
| TGAATGATGGAATTGGAAGA+AGG | 0.622094 | 7_3:-31615784 | None:intergenic |
| ATCGGAGGTGAGGATGTTGG+TGG | 0.624840 | 7_3:-31616012 | None:intergenic |
| TAAAGGTCATGCTAACAAGT+GGG | 0.630166 | 7_3:-31619682 | None:intergenic |
| CAGAGTACATTATCTGAAGG+AGG | 0.633964 | 7_3:+31619324 | Msa1101080:CDS |
| TAAATAAAATAATAATTGGG+GGG | 0.634200 | 7_3:-31615829 | None:intergenic |
| ACAAGTGACACAGCGAGTGA+GGG | 0.642400 | 7_3:-31615670 | None:intergenic |
| ACTCTGCATAACAAAATTTG+GGG | 0.642463 | 7_3:-31619307 | None:intergenic |
| TAATTCATCGGACGGCTATG+GGG | 0.644964 | 7_3:-31615715 | None:intergenic |
| GATGCTCACTGTGCTGCCGG+AGG | 0.647391 | 7_3:+31618012 | Msa1101080:CDS |
| GCCGTCAAAAGATTTAGTAG+TGG | 0.647735 | 7_3:+31617716 | Msa1101080:CDS |
| ACAATCCTGCAACCGCGTCG+CGG | 0.656285 | 7_3:+31615938 | Msa1101080:CDS |
| GTTCGAAATTGGAGGCGTGG+CGG | 0.674695 | 7_3:-31616037 | None:intergenic |
| CATAAGCCACTATACCCAAG+AGG | 0.676208 | 7_3:+31618081 | Msa1101080:CDS |
| AATCTGCAGAGTGAAGAGAA+TGG | 0.677343 | 7_3:+31617971 | Msa1101080:CDS |
| GGTTGCAGGATTGTGTATCG+TGG | 0.686789 | 7_3:-31615929 | None:intergenic |
| GTTGGTGGCGACATCCCAGG+CGG | 0.703977 | 7_3:-31615997 | None:intergenic |
| GAATTACAGATACAAAACGA+AGG | 0.708504 | 7_3:+31617641 | Msa1101080:intron |
| TGGTTCTCGAGTTCCTGCTG+CGG | 0.713905 | 7_3:+31618220 | Msa1101080:CDS |
| TGAACTTGTGACTAAACACG+AGG | 0.721732 | 7_3:+31618822 | Msa1101080:CDS |
| CTTGCGTTTGAGAATCTGAG+CGG | 0.739843 | 7_3:-31616072 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATAAAATAATAATT+GGG | - | chr7_3:31615835-31615854 | None:intergenic | 0.0% |
| !! | TAAATAAATAAAATAATAAT+TGG | - | chr7_3:31615836-31615855 | None:intergenic | 0.0% |
| !! | AAATAAATAAAATAATAATT+GGG | - | chr7_3:31615835-31615854 | None:intergenic | 0.0% |
| !! | TAAATAAATAAAATAATAAT+TGG | - | chr7_3:31615836-31615855 | None:intergenic | 0.0% |
| !! | ATAAATAAAATAATAATTGG+GGG | - | chr7_3:31615833-31615852 | None:intergenic | 10.0% |
| !! | TAAGTATGAATTTATATTAA+AGG | - | chr7_3:31619702-31619721 | None:intergenic | 10.0% |
| !! | TTAATATAAATTCATACTTA+TGG | + | chr7_3:31619702-31619721 | Msa1101080:three_prime_UTR | 10.0% |
| !! | TAATATAAATTCATACTTAT+GGG | + | chr7_3:31619703-31619722 | Msa1101080:three_prime_UTR | 10.0% |
| !! | ATAAATAAAATAATAATTGG+GGG | - | chr7_3:31615833-31615852 | None:intergenic | 10.0% |
| !! | TAAGTATGAATTTATATTAA+AGG | - | chr7_3:31619702-31619721 | None:intergenic | 10.0% |
| !! | TTAATATAAATTCATACTTA+TGG | + | chr7_3:31619702-31619721 | Msa1101080:three_prime_UTR | 10.0% |
| !! | TAATATAAATTCATACTTAT+GGG | + | chr7_3:31619703-31619722 | Msa1101080:three_prime_UTR | 10.0% |
| !! | TAAATAAAATAATAATTGGG+GGG | - | chr7_3:31615832-31615851 | None:intergenic | 15.0% |
| !!! | TTCTGATTTTTTTTTTTTGT+CGG | - | chr7_3:31615865-31615884 | None:intergenic | 15.0% |
| !! | CAAAAAAAAAAAATCAGAAA+TGG | + | chr7_3:31615866-31615885 | Msa1101080:exon | 15.0% |
| !! | AAAAATCAGTTAGTTAAAAA+CGG | - | chr7_3:31616183-31616202 | None:intergenic | 15.0% |
| !! | TTTGTATACAAATATCTATA+TGG | + | chr7_3:31616315-31616334 | Msa1101080:intron | 15.0% |
| !! | TAAATACAAAATTAAGAAGT+GGG | - | chr7_3:31618665-31618684 | None:intergenic | 15.0% |
| !! | TTAAATACAAAATTAAGAAG+TGG | - | chr7_3:31618666-31618685 | None:intergenic | 15.0% |
| !!! | TGTCTAATATTTTATTTTCT+AGG | + | chr7_3:31619147-31619166 | Msa1101080:intron | 15.0% |
| !!! | TTTTATTTTCTAGGTAAATA+CGG | + | chr7_3:31619156-31619175 | Msa1101080:intron | 15.0% |
| !!! | TTATGTATTGATTTTGATTT+GGG | + | chr7_3:31619268-31619287 | Msa1101080:intron | 15.0% |
| !! | TTGTATGATTAATTAATGTA+AGG | + | chr7_3:31619500-31619519 | Msa1101080:exon | 15.0% |
| !! | TGTATGATTAATTAATGTAA+GGG | + | chr7_3:31619501-31619520 | Msa1101080:exon | 15.0% |
| !! | TAAATGTAGAAATTTAATCT+TGG | + | chr7_3:31619563-31619582 | Msa1101080:three_prime_UTR | 15.0% |
| !!! | GATCAATTTTTAAAATTTCA+AGG | - | chr7_3:31619606-31619625 | None:intergenic | 15.0% |
| !!! | AATAAAAGAACAATTTTACA+AGG | - | chr7_3:31619633-31619652 | None:intergenic | 15.0% |
| !! | AATATAAATTCATACTTATG+GGG | + | chr7_3:31619704-31619723 | Msa1101080:three_prime_UTR | 15.0% |
| !! | TAAATAAAATAATAATTGGG+GGG | - | chr7_3:31615832-31615851 | None:intergenic | 15.0% |
| !!! | TTCTGATTTTTTTTTTTTGT+CGG | - | chr7_3:31615865-31615884 | None:intergenic | 15.0% |
| !! | CAAAAAAAAAAAATCAGAAA+TGG | + | chr7_3:31615866-31615885 | Msa1101080:exon | 15.0% |
| !! | AAAAATCAGTTAGTTAAAAA+CGG | - | chr7_3:31616183-31616202 | None:intergenic | 15.0% |
| !! | TTTGTATACAAATATCTATA+TGG | + | chr7_3:31616315-31616334 | Msa1101080:intron | 15.0% |
| !! | TAAATACAAAATTAAGAAGT+GGG | - | chr7_3:31618665-31618684 | None:intergenic | 15.0% |
| !! | TTAAATACAAAATTAAGAAG+TGG | - | chr7_3:31618666-31618685 | None:intergenic | 15.0% |
| !!! | TGTCTAATATTTTATTTTCT+AGG | + | chr7_3:31619147-31619166 | Msa1101080:intron | 15.0% |
| !!! | TTTTATTTTCTAGGTAAATA+CGG | + | chr7_3:31619156-31619175 | Msa1101080:intron | 15.0% |
| !!! | TTATGTATTGATTTTGATTT+GGG | + | chr7_3:31619268-31619287 | Msa1101080:intron | 15.0% |
| !! | TTGTATGATTAATTAATGTA+AGG | + | chr7_3:31619500-31619519 | Msa1101080:exon | 15.0% |
| !! | TGTATGATTAATTAATGTAA+GGG | + | chr7_3:31619501-31619520 | Msa1101080:exon | 15.0% |
| !! | TAAATGTAGAAATTTAATCT+TGG | + | chr7_3:31619563-31619582 | Msa1101080:three_prime_UTR | 15.0% |
| !!! | GATCAATTTTTAAAATTTCA+AGG | - | chr7_3:31619606-31619625 | None:intergenic | 15.0% |
| !!! | AATAAAAGAACAATTTTACA+AGG | - | chr7_3:31619633-31619652 | None:intergenic | 15.0% |
| !! | AATATAAATTCATACTTATG+GGG | + | chr7_3:31619704-31619723 | Msa1101080:three_prime_UTR | 15.0% |
| !! | AAAAAAATCAGAAATGGAAT+TGG | + | chr7_3:31615872-31615891 | Msa1101080:exon | 20.0% |
| !!! | ATTGTATTCTCGTTTTTATA+GGG | - | chr7_3:31616920-31616939 | None:intergenic | 20.0% |
| !! | GTTAGAATAATGGTTAATTA+GGG | - | chr7_3:31617293-31617312 | None:intergenic | 20.0% |
| !! | AGTTAGAATAATGGTTAATT+AGG | - | chr7_3:31617294-31617313 | None:intergenic | 20.0% |
| !!! | TTAAACCAGGTTTTAAATTT+TGG | - | chr7_3:31617594-31617613 | None:intergenic | 20.0% |
| !!! | ATTTTTAGTTGTCTTAAAGA+TGG | + | chr7_3:31617803-31617822 | Msa1101080:intron | 20.0% |
| !!! | GATTTATGTCTAAAACAATT+TGG | + | chr7_3:31617825-31617844 | Msa1101080:intron | 20.0% |
| !!! | TAATTTTAGAATCAATACGT+TGG | - | chr7_3:31618051-31618070 | None:intergenic | 20.0% |
| !!! | CAATCTGAAATAAATTTTGA+TGG | + | chr7_3:31618243-31618262 | Msa1101080:CDS | 20.0% |
| !!! | TTTTTTATCTTATTCTTGCA+TGG | + | chr7_3:31618574-31618593 | Msa1101080:intron | 20.0% |
| !!! | ATATACTTGTTTCTTAAAGA+TGG | + | chr7_3:31618710-31618729 | Msa1101080:intron | 20.0% |
| !!! | TATTCATTTATTTTCTGTGT+AGG | + | chr7_3:31618762-31618781 | Msa1101080:intron | 20.0% |
| !! | AAAACGAACTATATAAGAAA+TGG | + | chr7_3:31619071-31619090 | Msa1101080:intron | 20.0% |
| !!! | TTTATTTTCTAGGTAAATAC+GGG | + | chr7_3:31619157-31619176 | Msa1101080:intron | 20.0% |
| !!! | GTTATGTATTGATTTTGATT+TGG | + | chr7_3:31619267-31619286 | Msa1101080:intron | 20.0% |
| !! | TAATCATACAACAAACAAAA+AGG | - | chr7_3:31619491-31619510 | None:intergenic | 20.0% |
| !! | AAAAAAATCAGAAATGGAAT+TGG | + | chr7_3:31615872-31615891 | Msa1101080:exon | 20.0% |
| !!! | ATTGTATTCTCGTTTTTATA+GGG | - | chr7_3:31616920-31616939 | None:intergenic | 20.0% |
| !! | GTTAGAATAATGGTTAATTA+GGG | - | chr7_3:31617293-31617312 | None:intergenic | 20.0% |
| !! | AGTTAGAATAATGGTTAATT+AGG | - | chr7_3:31617294-31617313 | None:intergenic | 20.0% |
| !!! | TTAAACCAGGTTTTAAATTT+TGG | - | chr7_3:31617594-31617613 | None:intergenic | 20.0% |
| !!! | ATTTTTAGTTGTCTTAAAGA+TGG | + | chr7_3:31617803-31617822 | Msa1101080:intron | 20.0% |
| !!! | GATTTATGTCTAAAACAATT+TGG | + | chr7_3:31617825-31617844 | Msa1101080:intron | 20.0% |
| !!! | TAATTTTAGAATCAATACGT+TGG | - | chr7_3:31618051-31618070 | None:intergenic | 20.0% |
| !!! | CAATCTGAAATAAATTTTGA+TGG | + | chr7_3:31618243-31618262 | Msa1101080:CDS | 20.0% |
| !!! | TTTTTTATCTTATTCTTGCA+TGG | + | chr7_3:31618574-31618593 | Msa1101080:intron | 20.0% |
| !!! | ATATACTTGTTTCTTAAAGA+TGG | + | chr7_3:31618710-31618729 | Msa1101080:intron | 20.0% |
| !!! | TATTCATTTATTTTCTGTGT+AGG | + | chr7_3:31618762-31618781 | Msa1101080:intron | 20.0% |
| !! | AAAACGAACTATATAAGAAA+TGG | + | chr7_3:31619071-31619090 | Msa1101080:intron | 20.0% |
| !!! | TTTATTTTCTAGGTAAATAC+GGG | + | chr7_3:31619157-31619176 | Msa1101080:intron | 20.0% |
| !!! | GTTATGTATTGATTTTGATT+TGG | + | chr7_3:31619267-31619286 | Msa1101080:intron | 20.0% |
| !! | TAATCATACAACAAACAAAA+AGG | - | chr7_3:31619491-31619510 | None:intergenic | 20.0% |
| !!! | GTTTTTTGTTCCTAATTCAT+CGG | - | chr7_3:31615730-31615749 | None:intergenic | 25.0% |
| ! | TAGTTAAAAACGGAAACTAT+TGG | - | chr7_3:31616173-31616192 | None:intergenic | 25.0% |
| !!! | ACTAACTGATTTTTTTACTG+TGG | + | chr7_3:31616189-31616208 | Msa1101080:intron | 25.0% |
| ! | CTATATGGTGATATATTGTT+AGG | + | chr7_3:31616330-31616349 | Msa1101080:intron | 25.0% |
| ! | AGAAGTAGCTTATTTATAAG+AGG | - | chr7_3:31616515-31616534 | None:intergenic | 25.0% |
| !!! | CATTGTATTCTCGTTTTTAT+AGG | - | chr7_3:31616921-31616940 | None:intergenic | 25.0% |
| ! | GGATGAAAATTTAGTCAAAA+TGG | + | chr7_3:31617091-31617110 | Msa1101080:intron | 25.0% |
| ! | ATAGAAGTTAGTTAGTTAGT+TGG | - | chr7_3:31617246-31617265 | None:intergenic | 25.0% |
| ! | TGTAACTGATGATAATTGTA+TGG | + | chr7_3:31617478-31617497 | Msa1101080:intron | 25.0% |
| !! | GTTGATTATGAATGTTTTCA+CGG | - | chr7_3:31617528-31617547 | None:intergenic | 25.0% |
| !!! | TTCATTATTTTATGCCTCTT+CGG | + | chr7_3:31617768-31617787 | Msa1101080:intron | 25.0% |
| ! | ATTCATGTTATGTACAAAAC+AGG | - | chr7_3:31618516-31618535 | None:intergenic | 25.0% |
| !! | TTTTGTATTTAACTCATTGC+AGG | + | chr7_3:31618674-31618693 | Msa1101080:CDS | 25.0% |
| ! | ATCAAGACACAAGATTTAAA+TGG | - | chr7_3:31618874-31618893 | None:intergenic | 25.0% |
| !! | TACACTAGGTTGTATAATTT+TGG | + | chr7_3:31619001-31619020 | Msa1101080:intron | 25.0% |
| !!! | AGAAATGGATTTTTACTAGT+TGG | + | chr7_3:31619086-31619105 | Msa1101080:intron | 25.0% |
| !!! | TTTTGATTTGGGTTTTCTAT+AGG | + | chr7_3:31619279-31619298 | Msa1101080:intron | 25.0% |
| !!! | TTTGATTTGGGTTTTCTATA+GGG | + | chr7_3:31619280-31619299 | Msa1101080:intron | 25.0% |
| ! | TACTCTGCATAACAAAATTT+GGG | - | chr7_3:31619311-31619330 | None:intergenic | 25.0% |
| !!! | ACAAAAAGGTATCCATAAAA+AGG | - | chr7_3:31619477-31619496 | None:intergenic | 25.0% |
| !!! | GTTTTTTGTTCCTAATTCAT+CGG | - | chr7_3:31615730-31615749 | None:intergenic | 25.0% |
| ! | TAGTTAAAAACGGAAACTAT+TGG | - | chr7_3:31616173-31616192 | None:intergenic | 25.0% |
| !!! | ACTAACTGATTTTTTTACTG+TGG | + | chr7_3:31616189-31616208 | Msa1101080:intron | 25.0% |
| ! | CTATATGGTGATATATTGTT+AGG | + | chr7_3:31616330-31616349 | Msa1101080:intron | 25.0% |
| ! | AGAAGTAGCTTATTTATAAG+AGG | - | chr7_3:31616515-31616534 | None:intergenic | 25.0% |
| !!! | CATTGTATTCTCGTTTTTAT+AGG | - | chr7_3:31616921-31616940 | None:intergenic | 25.0% |
| ! | GGATGAAAATTTAGTCAAAA+TGG | + | chr7_3:31617091-31617110 | Msa1101080:intron | 25.0% |
| ! | ATAGAAGTTAGTTAGTTAGT+TGG | - | chr7_3:31617246-31617265 | None:intergenic | 25.0% |
| ! | TGTAACTGATGATAATTGTA+TGG | + | chr7_3:31617478-31617497 | Msa1101080:intron | 25.0% |
| !! | GTTGATTATGAATGTTTTCA+CGG | - | chr7_3:31617528-31617547 | None:intergenic | 25.0% |
| !!! | TTCATTATTTTATGCCTCTT+CGG | + | chr7_3:31617768-31617787 | Msa1101080:intron | 25.0% |
| ! | ATTCATGTTATGTACAAAAC+AGG | - | chr7_3:31618516-31618535 | None:intergenic | 25.0% |
| !! | TTTTGTATTTAACTCATTGC+AGG | + | chr7_3:31618674-31618693 | Msa1101080:CDS | 25.0% |
| ! | ATCAAGACACAAGATTTAAA+TGG | - | chr7_3:31618874-31618893 | None:intergenic | 25.0% |
| !! | TACACTAGGTTGTATAATTT+TGG | + | chr7_3:31619001-31619020 | Msa1101080:intron | 25.0% |
| !!! | AGAAATGGATTTTTACTAGT+TGG | + | chr7_3:31619086-31619105 | Msa1101080:intron | 25.0% |
| !!! | TTTTGATTTGGGTTTTCTAT+AGG | + | chr7_3:31619279-31619298 | Msa1101080:intron | 25.0% |
| !!! | TTTGATTTGGGTTTTCTATA+GGG | + | chr7_3:31619280-31619299 | Msa1101080:intron | 25.0% |
| ! | TACTCTGCATAACAAAATTT+GGG | - | chr7_3:31619311-31619330 | None:intergenic | 25.0% |
| !!! | ACAAAAAGGTATCCATAAAA+AGG | - | chr7_3:31619477-31619496 | None:intergenic | 25.0% |
| CTGAATCCTAATCCTATTTA+GGG | - | chr7_3:31616733-31616752 | None:intergenic | 30.0% | |
| ACTGAATCCTAATCCTATTT+AGG | - | chr7_3:31616734-31616753 | None:intergenic | 30.0% | |
| AAGAGAAATGGTAGATAAGA+TGG | + | chr7_3:31616816-31616835 | Msa1101080:intron | 30.0% | |
| AGAGAAATGGTAGATAAGAT+GGG | + | chr7_3:31616817-31616836 | Msa1101080:intron | 30.0% | |
| !! | TCATCCATTTCTAGTAACAT+CGG | - | chr7_3:31617077-31617096 | None:intergenic | 30.0% |
| AAGTTAGTTAGTTAGTTGGT+TGG | - | chr7_3:31617242-31617261 | None:intergenic | 30.0% | |
| TCTATCAGGAGTTAGAATAA+TGG | - | chr7_3:31617303-31617322 | None:intergenic | 30.0% | |
| TAACTCCTGATAGATATGAT+TGG | + | chr7_3:31617309-31617328 | Msa1101080:intron | 30.0% | |
| AACAACCAATCATATCTATC+AGG | - | chr7_3:31617317-31617336 | None:intergenic | 30.0% | |
| ! | TGATAGATATGATTGGTTGT+TGG | + | chr7_3:31617316-31617335 | Msa1101080:intron | 30.0% |
| ACTTGGTCATTAATGTTTCA+TGG | - | chr7_3:31617398-31617417 | None:intergenic | 30.0% | |
| ATCACAAATAAACGTGAATG+TGG | - | chr7_3:31617431-31617450 | None:intergenic | 30.0% | |
| CTATTGTGGATAAATGTTGT+TGG | - | chr7_3:31617558-31617577 | None:intergenic | 30.0% | |
| TAATCATCAGTCATTAAACC+AGG | - | chr7_3:31617607-31617626 | None:intergenic | 30.0% | |
| GAATTACAGATACAAAACGA+AGG | + | chr7_3:31617641-31617660 | Msa1101080:intron | 30.0% | |
| ! | ACCACTACTAAATCTTTTGA+CGG | - | chr7_3:31617720-31617739 | None:intergenic | 30.0% |
| !! | TCATTATTTTATGCCTCTTC+GGG | + | chr7_3:31617769-31617788 | Msa1101080:intron | 30.0% |
| TGTAAAAAAGCTGCTCAATT+GGG | - | chr7_3:31617943-31617962 | None:intergenic | 30.0% | |
| CAAAAGTTTCAAAACCTCTT+GGG | - | chr7_3:31618098-31618117 | None:intergenic | 30.0% | |
| !! | AGAAGTTTTTCAAAGAAGCT+CGG | - | chr7_3:31618550-31618569 | None:intergenic | 30.0% |
| AGAAACAAGTATATGAGAAC+TGG | - | chr7_3:31618704-31618723 | None:intergenic | 30.0% | |
| AAGTTCAACAAGAACTTCAA+TGG | - | chr7_3:31618809-31618828 | None:intergenic | 30.0% | |
| AAGACTTGAAGTTATACACT+AGG | + | chr7_3:31618987-31619006 | Msa1101080:intron | 30.0% | |
| ! | AATACGGGATATGGATTTTT+AGG | + | chr7_3:31619172-31619191 | Msa1101080:intron | 30.0% |
| ACTCTGCATAACAAAATTTG+GGG | - | chr7_3:31619310-31619329 | None:intergenic | 30.0% | |
| GTACTCTGCATAACAAAATT+TGG | - | chr7_3:31619312-31619331 | None:intergenic | 30.0% | |
| ! | TTCTTTTTCCAGCTCTTAAT+AGG | + | chr7_3:31619350-31619369 | Msa1101080:CDS | 30.0% |
| ! | TCTTTTTCCAGCTCTTAATA+GGG | + | chr7_3:31619351-31619370 | Msa1101080:CDS | 30.0% |
| !! | CATGCTTGTTATCAGAAATT+GGG | + | chr7_3:31619401-31619420 | Msa1101080:CDS | 30.0% |
| !! | GACTTTGAAAGTCCTTTTTA+TGG | + | chr7_3:31619462-31619481 | Msa1101080:CDS | 30.0% |
| CTGAATCCTAATCCTATTTA+GGG | - | chr7_3:31616733-31616752 | None:intergenic | 30.0% | |
| ACTGAATCCTAATCCTATTT+AGG | - | chr7_3:31616734-31616753 | None:intergenic | 30.0% | |
| AAGAGAAATGGTAGATAAGA+TGG | + | chr7_3:31616816-31616835 | Msa1101080:intron | 30.0% | |
| AGAGAAATGGTAGATAAGAT+GGG | + | chr7_3:31616817-31616836 | Msa1101080:intron | 30.0% | |
| !! | TCATCCATTTCTAGTAACAT+CGG | - | chr7_3:31617077-31617096 | None:intergenic | 30.0% |
| AAGTTAGTTAGTTAGTTGGT+TGG | - | chr7_3:31617242-31617261 | None:intergenic | 30.0% | |
| TCTATCAGGAGTTAGAATAA+TGG | - | chr7_3:31617303-31617322 | None:intergenic | 30.0% | |
| TAACTCCTGATAGATATGAT+TGG | + | chr7_3:31617309-31617328 | Msa1101080:intron | 30.0% | |
| AACAACCAATCATATCTATC+AGG | - | chr7_3:31617317-31617336 | None:intergenic | 30.0% | |
| ! | TGATAGATATGATTGGTTGT+TGG | + | chr7_3:31617316-31617335 | Msa1101080:intron | 30.0% |
| ACTTGGTCATTAATGTTTCA+TGG | - | chr7_3:31617398-31617417 | None:intergenic | 30.0% | |
| ATCACAAATAAACGTGAATG+TGG | - | chr7_3:31617431-31617450 | None:intergenic | 30.0% | |
| CTATTGTGGATAAATGTTGT+TGG | - | chr7_3:31617558-31617577 | None:intergenic | 30.0% | |
| TAATCATCAGTCATTAAACC+AGG | - | chr7_3:31617607-31617626 | None:intergenic | 30.0% | |
| GAATTACAGATACAAAACGA+AGG | + | chr7_3:31617641-31617660 | Msa1101080:intron | 30.0% | |
| ! | ACCACTACTAAATCTTTTGA+CGG | - | chr7_3:31617720-31617739 | None:intergenic | 30.0% |
| !! | TCATTATTTTATGCCTCTTC+GGG | + | chr7_3:31617769-31617788 | Msa1101080:intron | 30.0% |
| TGTAAAAAAGCTGCTCAATT+GGG | - | chr7_3:31617943-31617962 | None:intergenic | 30.0% | |
| CAAAAGTTTCAAAACCTCTT+GGG | - | chr7_3:31618098-31618117 | None:intergenic | 30.0% | |
| !! | AGAAGTTTTTCAAAGAAGCT+CGG | - | chr7_3:31618550-31618569 | None:intergenic | 30.0% |
| AGAAACAAGTATATGAGAAC+TGG | - | chr7_3:31618704-31618723 | None:intergenic | 30.0% | |
| AAGTTCAACAAGAACTTCAA+TGG | - | chr7_3:31618809-31618828 | None:intergenic | 30.0% | |
| AAGACTTGAAGTTATACACT+AGG | + | chr7_3:31618987-31619006 | Msa1101080:intron | 30.0% | |
| ! | AATACGGGATATGGATTTTT+AGG | + | chr7_3:31619172-31619191 | Msa1101080:intron | 30.0% |
| ACTCTGCATAACAAAATTTG+GGG | - | chr7_3:31619310-31619329 | None:intergenic | 30.0% | |
| GTACTCTGCATAACAAAATT+TGG | - | chr7_3:31619312-31619331 | None:intergenic | 30.0% | |
| ! | TTCTTTTTCCAGCTCTTAAT+AGG | + | chr7_3:31619350-31619369 | Msa1101080:CDS | 30.0% |
| ! | TCTTTTTCCAGCTCTTAATA+GGG | + | chr7_3:31619351-31619370 | Msa1101080:CDS | 30.0% |
| !! | CATGCTTGTTATCAGAAATT+GGG | + | chr7_3:31619401-31619420 | Msa1101080:CDS | 30.0% |
| !! | GACTTTGAAAGTCCTTTTTA+TGG | + | chr7_3:31619462-31619481 | Msa1101080:CDS | 30.0% |
| TTTGTTCCTAATTCATCGGA+CGG | - | chr7_3:31615726-31615745 | None:intergenic | 35.0% | |
| ! | TGAATGATGGAATTGGAAGA+AGG | - | chr7_3:31615787-31615806 | None:intergenic | 35.0% |
| ! | AGAGTGATGAATGATGGAAT+TGG | - | chr7_3:31615794-31615813 | None:intergenic | 35.0% |
| AGAAATGGAATTGGCAATGA+AGG | + | chr7_3:31615881-31615900 | Msa1101080:exon | 35.0% | |
| ! | GAAGAATTCGAGTTCGAAAT+TGG | - | chr7_3:31616051-31616070 | None:intergenic | 35.0% |
| AAGAGTGAACAAAGGGAAAA+TGG | - | chr7_3:31616134-31616153 | None:intergenic | 35.0% | |
| GTGAAGAAAGAGTGAACAAA+GGG | - | chr7_3:31616141-31616160 | None:intergenic | 35.0% | |
| TGTGAAGAAAGAGTGAACAA+AGG | - | chr7_3:31616142-31616161 | None:intergenic | 35.0% | |
| ! | TAGTCAGTTGAGGTTTTTAC+AGG | + | chr7_3:31616417-31616436 | Msa1101080:intron | 35.0% |
| ! | AGTCAGTTGAGGTTTTTACA+GGG | + | chr7_3:31616418-31616437 | Msa1101080:intron | 35.0% |
| TTTACAGGGCTATTTGTGTA+AGG | + | chr7_3:31616432-31616451 | Msa1101080:intron | 35.0% | |
| ! | TTAAGTTGTCTGCCTAAACA+GGG | - | chr7_3:31616458-31616477 | None:intergenic | 35.0% |
| ! | ATTAAGTTGTCTGCCTAAAC+AGG | - | chr7_3:31616459-31616478 | None:intergenic | 35.0% |
| GCTTATTTCATAAGCTGTTC+AGG | - | chr7_3:31616600-31616619 | None:intergenic | 35.0% | |
| ! | AACCACTAGTGAGACTATTT+TGG | - | chr7_3:31616671-31616690 | None:intergenic | 35.0% |
| AGAGAAAGACGAAAGAGAAA+TGG | + | chr7_3:31616804-31616823 | Msa1101080:intron | 35.0% | |
| GGAGAGAAAGAGAGTAATAT+AGG | + | chr7_3:31616838-31616857 | Msa1101080:intron | 35.0% | |
| AGCAGTAACTCTATTGTGAA+GGG | + | chr7_3:31616983-31617002 | Msa1101080:intron | 35.0% | |
| AACCCTTAGAATCCAATTCT+TGG | + | chr7_3:31617008-31617027 | Msa1101080:intron | 35.0% | |
| ACCCTTAGAATCCAATTCTT+GGG | + | chr7_3:31617009-31617028 | Msa1101080:intron | 35.0% | |
| ACCCAAGAATTGGATTCTAA+GGG | - | chr7_3:31617013-31617032 | None:intergenic | 35.0% | |
| AACCCAAGAATTGGATTCTA+AGG | - | chr7_3:31617014-31617033 | None:intergenic | 35.0% | |
| ATTGTTAGGAACCCAAGAAT+TGG | - | chr7_3:31617023-31617042 | None:intergenic | 35.0% | |
| ATTCTTGGGTTCCTAACAAT+TGG | + | chr7_3:31617023-31617042 | Msa1101080:intron | 35.0% | |
| ! | TGCGACCAAAATTTAAAACC+TGG | + | chr7_3:31617586-31617605 | Msa1101080:intron | 35.0% |
| AAAGAAAAACAATGCACCTG+TGG | - | chr7_3:31617746-31617765 | None:intergenic | 35.0% | |
| CTGTAAAAAAGCTGCTCAAT+TGG | - | chr7_3:31617944-31617963 | None:intergenic | 35.0% | |
| GCAAAAGTTTCAAAACCTCT+TGG | - | chr7_3:31618099-31618118 | None:intergenic | 35.0% | |
| !! | AGAAAGGAAGTACTGAAACA+CGG | - | chr7_3:31618144-31618163 | None:intergenic | 35.0% |
| AAAGTGTGTGTGGATATTCA+GGG | - | chr7_3:31618171-31618190 | None:intergenic | 35.0% | |
| ! | AAAAGTGTGTGTGGATATTC+AGG | - | chr7_3:31618172-31618191 | None:intergenic | 35.0% |
| ! | CTGTAAAACAAAAGTGTGTG+TGG | - | chr7_3:31618181-31618200 | None:intergenic | 35.0% |
| GTGCAGTACAACATAATGAA+AGG | + | chr7_3:31618265-31618284 | Msa1101080:CDS | 35.0% | |
| ! | ATCGATGACTCATTTGCTTT+TGG | + | chr7_3:31618333-31618352 | Msa1101080:intron | 35.0% |
| !! | TCGATGACTCATTTGCTTTT+GGG | + | chr7_3:31618334-31618353 | Msa1101080:intron | 35.0% |
| ! | AACTCTAAAAGTATGCACCA+TGG | - | chr7_3:31618368-31618387 | None:intergenic | 35.0% |
| ! | TGTTAAGCCTGATTGTTTTC+TGG | + | chr7_3:31618466-31618485 | Msa1101080:intron | 35.0% |
| ! | GTTAAGCCTGATTGTTTTCT+GGG | + | chr7_3:31618467-31618486 | Msa1101080:intron | 35.0% |
| !! | GAAGTTTTTCAAAGAAGCTC+GGG | - | chr7_3:31618549-31618568 | None:intergenic | 35.0% |
| TGAAATTTCTCCAGGAACAT+TGG | + | chr7_3:31618632-31618651 | Msa1101080:CDS | 35.0% | |
| !! | CTAGGTTGTATAATTTTGGC+AGG | + | chr7_3:31619005-31619024 | Msa1101080:intron | 35.0% |
| TTCTAGGTAAATACGGGATA+TGG | + | chr7_3:31619163-31619182 | Msa1101080:intron | 35.0% | |
| ATGCAGAGTACATTATCTGA+AGG | + | chr7_3:31619321-31619340 | Msa1101080:CDS | 35.0% | |
| ! | CTTTTTCCAGCTCTTAATAG+GGG | + | chr7_3:31619352-31619371 | Msa1101080:CDS | 35.0% |
| TTTCTGATAACAAGCATGCA+AGG | - | chr7_3:31619399-31619418 | None:intergenic | 35.0% | |
| !! | GCATGCTTGTTATCAGAAAT+TGG | + | chr7_3:31619400-31619419 | Msa1101080:CDS | 35.0% |
| AGTGTATATTTGTGTTCCCT+AGG | + | chr7_3:31619440-31619459 | Msa1101080:CDS | 35.0% | |
| AAAGGACTTTCAAAGTCCTA+GGG | - | chr7_3:31619459-31619478 | None:intergenic | 35.0% | |
| AAAAGGACTTTCAAAGTCCT+AGG | - | chr7_3:31619460-31619479 | None:intergenic | 35.0% | |
| !! | AAATGCTAACAAGAGCACTT+AGG | + | chr7_3:31619524-31619543 | Msa1101080:three_prime_UTR | 35.0% |
| !! | AATGCTAACAAGAGCACTTA+GGG | + | chr7_3:31619525-31619544 | Msa1101080:three_prime_UTR | 35.0% |
| TAAAGGTCATGCTAACAAGT+GGG | - | chr7_3:31619685-31619704 | None:intergenic | 35.0% | |
| TTAAAGGTCATGCTAACAAG+TGG | - | chr7_3:31619686-31619705 | None:intergenic | 35.0% | |
| TTTGTTCCTAATTCATCGGA+CGG | - | chr7_3:31615726-31615745 | None:intergenic | 35.0% | |
| ! | TGAATGATGGAATTGGAAGA+AGG | - | chr7_3:31615787-31615806 | None:intergenic | 35.0% |
| ! | AGAGTGATGAATGATGGAAT+TGG | - | chr7_3:31615794-31615813 | None:intergenic | 35.0% |
| AGAAATGGAATTGGCAATGA+AGG | + | chr7_3:31615881-31615900 | Msa1101080:exon | 35.0% | |
| ! | GAAGAATTCGAGTTCGAAAT+TGG | - | chr7_3:31616051-31616070 | None:intergenic | 35.0% |
| AAGAGTGAACAAAGGGAAAA+TGG | - | chr7_3:31616134-31616153 | None:intergenic | 35.0% | |
| GTGAAGAAAGAGTGAACAAA+GGG | - | chr7_3:31616141-31616160 | None:intergenic | 35.0% | |
| TGTGAAGAAAGAGTGAACAA+AGG | - | chr7_3:31616142-31616161 | None:intergenic | 35.0% | |
| ! | TAGTCAGTTGAGGTTTTTAC+AGG | + | chr7_3:31616417-31616436 | Msa1101080:intron | 35.0% |
| ! | AGTCAGTTGAGGTTTTTACA+GGG | + | chr7_3:31616418-31616437 | Msa1101080:intron | 35.0% |
| TTTACAGGGCTATTTGTGTA+AGG | + | chr7_3:31616432-31616451 | Msa1101080:intron | 35.0% | |
| ! | TTAAGTTGTCTGCCTAAACA+GGG | - | chr7_3:31616458-31616477 | None:intergenic | 35.0% |
| ! | ATTAAGTTGTCTGCCTAAAC+AGG | - | chr7_3:31616459-31616478 | None:intergenic | 35.0% |
| GCTTATTTCATAAGCTGTTC+AGG | - | chr7_3:31616600-31616619 | None:intergenic | 35.0% | |
| ! | AACCACTAGTGAGACTATTT+TGG | - | chr7_3:31616671-31616690 | None:intergenic | 35.0% |
| AGAGAAAGACGAAAGAGAAA+TGG | + | chr7_3:31616804-31616823 | Msa1101080:intron | 35.0% | |
| GGAGAGAAAGAGAGTAATAT+AGG | + | chr7_3:31616838-31616857 | Msa1101080:intron | 35.0% | |
| AGCAGTAACTCTATTGTGAA+GGG | + | chr7_3:31616983-31617002 | Msa1101080:intron | 35.0% | |
| AACCCTTAGAATCCAATTCT+TGG | + | chr7_3:31617008-31617027 | Msa1101080:intron | 35.0% | |
| ACCCTTAGAATCCAATTCTT+GGG | + | chr7_3:31617009-31617028 | Msa1101080:intron | 35.0% | |
| ACCCAAGAATTGGATTCTAA+GGG | - | chr7_3:31617013-31617032 | None:intergenic | 35.0% | |
| AACCCAAGAATTGGATTCTA+AGG | - | chr7_3:31617014-31617033 | None:intergenic | 35.0% | |
| ATTGTTAGGAACCCAAGAAT+TGG | - | chr7_3:31617023-31617042 | None:intergenic | 35.0% | |
| ATTCTTGGGTTCCTAACAAT+TGG | + | chr7_3:31617023-31617042 | Msa1101080:intron | 35.0% | |
| ! | TGCGACCAAAATTTAAAACC+TGG | + | chr7_3:31617586-31617605 | Msa1101080:intron | 35.0% |
| AAAGAAAAACAATGCACCTG+TGG | - | chr7_3:31617746-31617765 | None:intergenic | 35.0% | |
| CTGTAAAAAAGCTGCTCAAT+TGG | - | chr7_3:31617944-31617963 | None:intergenic | 35.0% | |
| GCAAAAGTTTCAAAACCTCT+TGG | - | chr7_3:31618099-31618118 | None:intergenic | 35.0% | |
| !! | AGAAAGGAAGTACTGAAACA+CGG | - | chr7_3:31618144-31618163 | None:intergenic | 35.0% |
| AAAGTGTGTGTGGATATTCA+GGG | - | chr7_3:31618171-31618190 | None:intergenic | 35.0% | |
| ! | AAAAGTGTGTGTGGATATTC+AGG | - | chr7_3:31618172-31618191 | None:intergenic | 35.0% |
| ! | CTGTAAAACAAAAGTGTGTG+TGG | - | chr7_3:31618181-31618200 | None:intergenic | 35.0% |
| GTGCAGTACAACATAATGAA+AGG | + | chr7_3:31618265-31618284 | Msa1101080:CDS | 35.0% | |
| ! | ATCGATGACTCATTTGCTTT+TGG | + | chr7_3:31618333-31618352 | Msa1101080:intron | 35.0% |
| !! | TCGATGACTCATTTGCTTTT+GGG | + | chr7_3:31618334-31618353 | Msa1101080:intron | 35.0% |
| ! | AACTCTAAAAGTATGCACCA+TGG | - | chr7_3:31618368-31618387 | None:intergenic | 35.0% |
| ! | TGTTAAGCCTGATTGTTTTC+TGG | + | chr7_3:31618466-31618485 | Msa1101080:intron | 35.0% |
| ! | GTTAAGCCTGATTGTTTTCT+GGG | + | chr7_3:31618467-31618486 | Msa1101080:intron | 35.0% |
| !! | GAAGTTTTTCAAAGAAGCTC+GGG | - | chr7_3:31618549-31618568 | None:intergenic | 35.0% |
| TGAAATTTCTCCAGGAACAT+TGG | + | chr7_3:31618632-31618651 | Msa1101080:CDS | 35.0% | |
| !! | CTAGGTTGTATAATTTTGGC+AGG | + | chr7_3:31619005-31619024 | Msa1101080:intron | 35.0% |
| TTCTAGGTAAATACGGGATA+TGG | + | chr7_3:31619163-31619182 | Msa1101080:intron | 35.0% | |
| ATGCAGAGTACATTATCTGA+AGG | + | chr7_3:31619321-31619340 | Msa1101080:CDS | 35.0% | |
| ! | CTTTTTCCAGCTCTTAATAG+GGG | + | chr7_3:31619352-31619371 | Msa1101080:CDS | 35.0% |
| TTTCTGATAACAAGCATGCA+AGG | - | chr7_3:31619399-31619418 | None:intergenic | 35.0% | |
| !! | GCATGCTTGTTATCAGAAAT+TGG | + | chr7_3:31619400-31619419 | Msa1101080:CDS | 35.0% |
| AGTGTATATTTGTGTTCCCT+AGG | + | chr7_3:31619440-31619459 | Msa1101080:CDS | 35.0% | |
| AAAGGACTTTCAAAGTCCTA+GGG | - | chr7_3:31619459-31619478 | None:intergenic | 35.0% | |
| AAAAGGACTTTCAAAGTCCT+AGG | - | chr7_3:31619460-31619479 | None:intergenic | 35.0% | |
| !! | AAATGCTAACAAGAGCACTT+AGG | + | chr7_3:31619524-31619543 | Msa1101080:three_prime_UTR | 35.0% |
| !! | AATGCTAACAAGAGCACTTA+GGG | + | chr7_3:31619525-31619544 | Msa1101080:three_prime_UTR | 35.0% |
| TAAAGGTCATGCTAACAAGT+GGG | - | chr7_3:31619685-31619704 | None:intergenic | 35.0% | |
| TTAAAGGTCATGCTAACAAG+TGG | - | chr7_3:31619686-31619705 | None:intergenic | 35.0% | |
| TAACAGAATCCTTCCTTTCC+AGG | + | chr7_3:31615756-31615775 | Msa1101080:five_prime_UTR | 40.0% | |
| TAATTGGGGGGAAAAAGAGA+GGG | - | chr7_3:31615820-31615839 | None:intergenic | 40.0% | |
| ATAATTGGGGGGAAAAAGAG+AGG | - | chr7_3:31615821-31615840 | None:intergenic | 40.0% | |
| ATGGAATTGGCAATGAAGGT+AGG | + | chr7_3:31615885-31615904 | Msa1101080:CDS | 40.0% | |
| ! | GAATTCGAGTTCGAAATTGG+AGG | - | chr7_3:31616048-31616067 | None:intergenic | 40.0% |
| GCTAGTTAGTTAGTCAGTTG+AGG | + | chr7_3:31616407-31616426 | Msa1101080:intron | 40.0% | |
| ATTTGTGTAAGGCCCTGTTT+AGG | + | chr7_3:31616443-31616462 | Msa1101080:intron | 40.0% | |
| CTCCAAAATAGTCTCACTAG+TGG | + | chr7_3:31616666-31616685 | Msa1101080:intron | 40.0% | |
| TCAGATAAGCCAATCCAAAC+AGG | + | chr7_3:31616707-31616726 | Msa1101080:intron | 40.0% | |
| ! | TATTTAGGGCCTGTTTGGAT+TGG | - | chr7_3:31616719-31616738 | None:intergenic | 40.0% |
| AATCCAAACAGGCCCTAAAT+AGG | + | chr7_3:31616718-31616737 | Msa1101080:intron | 40.0% | |
| ! | AATCCTATTTAGGGCCTGTT+TGG | - | chr7_3:31616724-31616743 | None:intergenic | 40.0% |
| AACAGGCCCTAAATAGGATT+AGG | + | chr7_3:31616724-31616743 | Msa1101080:intron | 40.0% | |
| GGATTAGGATTCAGTGACTT+TGG | + | chr7_3:31616739-31616758 | Msa1101080:intron | 40.0% | |
| TTAGGATTCAGTGACTTTGG+TGG | + | chr7_3:31616742-31616761 | Msa1101080:intron | 40.0% | |
| !! | TTCTCGTTTTTATAGGGACC+CGG | - | chr7_3:31616914-31616933 | None:intergenic | 40.0% |
| CAAGTGTTTGCAATGCTCAA+TGG | - | chr7_3:31616956-31616975 | None:intergenic | 40.0% | |
| GAGCAGTAACTCTATTGTGA+AGG | + | chr7_3:31616982-31617001 | Msa1101080:intron | 40.0% | |
| GCAGTAACTCTATTGTGAAG+GGG | + | chr7_3:31616984-31617003 | Msa1101080:intron | 40.0% | |
| !! | AGTGCCGATGTTACTAGAAA+TGG | + | chr7_3:31617070-31617089 | Msa1101080:intron | 40.0% |
| ! | TTTTGCCTCTCAATTCAAGC+AGG | - | chr7_3:31617154-31617173 | None:intergenic | 40.0% |
| ATGAAACCAGTCGCAGAATA+GGG | + | chr7_3:31617209-31617228 | Msa1101080:intron | 40.0% | |
| ! | AATGTGGTTGATGCAAGACT+TGG | - | chr7_3:31617415-31617434 | None:intergenic | 40.0% |
| GTGGATAAATGTTGTTGGTG+CGG | - | chr7_3:31617553-31617572 | None:intergenic | 40.0% | |
| GAAGGTTATCTACTGCAATC+AGG | + | chr7_3:31617659-31617678 | Msa1101080:CDS | 40.0% | |
| ! | GCATTTAACAAAGCGTCCTT+AGG | - | chr7_3:31617686-31617705 | None:intergenic | 40.0% |
| GCCGTCAAAAGATTTAGTAG+TGG | + | chr7_3:31617716-31617735 | Msa1101080:CDS | 40.0% | |
| !!! | AGCAGCTTTTTTACAGTCTC+CGG | + | chr7_3:31617948-31617967 | Msa1101080:CDS | 40.0% |
| AATCTGCAGAGTGAAGAGAA+TGG | + | chr7_3:31617971-31617990 | Msa1101080:CDS | 40.0% | |
| TCAAAACCTCTTGGGTATAG+TGG | - | chr7_3:31618090-31618109 | None:intergenic | 40.0% | |
| GGATATTCAGGGTTAGAGAA+AGG | - | chr7_3:31618160-31618179 | None:intergenic | 40.0% | |
| CTACATGGATCAAATTACGC+AGG | - | chr7_3:31618415-31618434 | None:intergenic | 40.0% | |
| ACAACAACAACCCACTAAGT+GGG | - | chr7_3:31618443-31618462 | None:intergenic | 40.0% | |
| AACAACAACAACCCACTAAG+TGG | - | chr7_3:31618444-31618463 | None:intergenic | 40.0% | |
| GCTCTAACCTAAACACAAGA+AGG | - | chr7_3:31618600-31618619 | None:intergenic | 40.0% | |
| ! | TCTTGTGTTTAGGTTAGAGC+TGG | + | chr7_3:31618600-31618619 | Msa1101080:intron | 40.0% |
| !! | TGCTTCTCTGAAATTTCTCC+AGG | + | chr7_3:31618624-31618643 | Msa1101080:CDS | 40.0% |
| TGAACTTGTGACTAAACACG+AGG | + | chr7_3:31618822-31618841 | Msa1101080:CDS | 40.0% | |
| TTGTGACTAAACACGAGGTA+TGG | + | chr7_3:31618827-31618846 | Msa1101080:intron | 40.0% | |
| TATGCTCTGTCACTGAGAAT+AGG | + | chr7_3:31619245-31619264 | Msa1101080:intron | 40.0% | |
| CAGAGTACATTATCTGAAGG+AGG | + | chr7_3:31619324-31619343 | Msa1101080:CDS | 40.0% | |
| AGGGGAGACATGAAAGTAAT+TGG | + | chr7_3:31619370-31619389 | Msa1101080:CDS | 40.0% | |
| GGAGACATGAAAGTAATTGG+TGG | + | chr7_3:31619373-31619392 | Msa1101080:CDS | 40.0% | |
| ! | TAACAAGTGGGCACTTGTTA+AGG | - | chr7_3:31619673-31619692 | None:intergenic | 40.0% |
| TAACAGAATCCTTCCTTTCC+AGG | + | chr7_3:31615756-31615775 | Msa1101080:five_prime_UTR | 40.0% | |
| TAATTGGGGGGAAAAAGAGA+GGG | - | chr7_3:31615820-31615839 | None:intergenic | 40.0% | |
| ATAATTGGGGGGAAAAAGAG+AGG | - | chr7_3:31615821-31615840 | None:intergenic | 40.0% | |
| ATGGAATTGGCAATGAAGGT+AGG | + | chr7_3:31615885-31615904 | Msa1101080:CDS | 40.0% | |
| ! | GAATTCGAGTTCGAAATTGG+AGG | - | chr7_3:31616048-31616067 | None:intergenic | 40.0% |
| GCTAGTTAGTTAGTCAGTTG+AGG | + | chr7_3:31616407-31616426 | Msa1101080:intron | 40.0% | |
| ATTTGTGTAAGGCCCTGTTT+AGG | + | chr7_3:31616443-31616462 | Msa1101080:intron | 40.0% | |
| CTCCAAAATAGTCTCACTAG+TGG | + | chr7_3:31616666-31616685 | Msa1101080:intron | 40.0% | |
| TCAGATAAGCCAATCCAAAC+AGG | + | chr7_3:31616707-31616726 | Msa1101080:intron | 40.0% | |
| ! | TATTTAGGGCCTGTTTGGAT+TGG | - | chr7_3:31616719-31616738 | None:intergenic | 40.0% |
| AATCCAAACAGGCCCTAAAT+AGG | + | chr7_3:31616718-31616737 | Msa1101080:intron | 40.0% | |
| ! | AATCCTATTTAGGGCCTGTT+TGG | - | chr7_3:31616724-31616743 | None:intergenic | 40.0% |
| AACAGGCCCTAAATAGGATT+AGG | + | chr7_3:31616724-31616743 | Msa1101080:intron | 40.0% | |
| GGATTAGGATTCAGTGACTT+TGG | + | chr7_3:31616739-31616758 | Msa1101080:intron | 40.0% | |
| TTAGGATTCAGTGACTTTGG+TGG | + | chr7_3:31616742-31616761 | Msa1101080:intron | 40.0% | |
| !! | TTCTCGTTTTTATAGGGACC+CGG | - | chr7_3:31616914-31616933 | None:intergenic | 40.0% |
| CAAGTGTTTGCAATGCTCAA+TGG | - | chr7_3:31616956-31616975 | None:intergenic | 40.0% | |
| GAGCAGTAACTCTATTGTGA+AGG | + | chr7_3:31616982-31617001 | Msa1101080:intron | 40.0% | |
| GCAGTAACTCTATTGTGAAG+GGG | + | chr7_3:31616984-31617003 | Msa1101080:intron | 40.0% | |
| !! | AGTGCCGATGTTACTAGAAA+TGG | + | chr7_3:31617070-31617089 | Msa1101080:intron | 40.0% |
| ! | TTTTGCCTCTCAATTCAAGC+AGG | - | chr7_3:31617154-31617173 | None:intergenic | 40.0% |
| ATGAAACCAGTCGCAGAATA+GGG | + | chr7_3:31617209-31617228 | Msa1101080:intron | 40.0% | |
| ! | AATGTGGTTGATGCAAGACT+TGG | - | chr7_3:31617415-31617434 | None:intergenic | 40.0% |
| GTGGATAAATGTTGTTGGTG+CGG | - | chr7_3:31617553-31617572 | None:intergenic | 40.0% | |
| GAAGGTTATCTACTGCAATC+AGG | + | chr7_3:31617659-31617678 | Msa1101080:CDS | 40.0% | |
| ! | GCATTTAACAAAGCGTCCTT+AGG | - | chr7_3:31617686-31617705 | None:intergenic | 40.0% |
| GCCGTCAAAAGATTTAGTAG+TGG | + | chr7_3:31617716-31617735 | Msa1101080:CDS | 40.0% | |
| !!! | AGCAGCTTTTTTACAGTCTC+CGG | + | chr7_3:31617948-31617967 | Msa1101080:CDS | 40.0% |
| AATCTGCAGAGTGAAGAGAA+TGG | + | chr7_3:31617971-31617990 | Msa1101080:CDS | 40.0% | |
| TCAAAACCTCTTGGGTATAG+TGG | - | chr7_3:31618090-31618109 | None:intergenic | 40.0% | |
| GGATATTCAGGGTTAGAGAA+AGG | - | chr7_3:31618160-31618179 | None:intergenic | 40.0% | |
| CTACATGGATCAAATTACGC+AGG | - | chr7_3:31618415-31618434 | None:intergenic | 40.0% | |
| ACAACAACAACCCACTAAGT+GGG | - | chr7_3:31618443-31618462 | None:intergenic | 40.0% | |
| AACAACAACAACCCACTAAG+TGG | - | chr7_3:31618444-31618463 | None:intergenic | 40.0% | |
| GCTCTAACCTAAACACAAGA+AGG | - | chr7_3:31618600-31618619 | None:intergenic | 40.0% | |
| ! | TCTTGTGTTTAGGTTAGAGC+TGG | + | chr7_3:31618600-31618619 | Msa1101080:intron | 40.0% |
| !! | TGCTTCTCTGAAATTTCTCC+AGG | + | chr7_3:31618624-31618643 | Msa1101080:CDS | 40.0% |
| TGAACTTGTGACTAAACACG+AGG | + | chr7_3:31618822-31618841 | Msa1101080:CDS | 40.0% | |
| TTGTGACTAAACACGAGGTA+TGG | + | chr7_3:31618827-31618846 | Msa1101080:intron | 40.0% | |
| TATGCTCTGTCACTGAGAAT+AGG | + | chr7_3:31619245-31619264 | Msa1101080:intron | 40.0% | |
| CAGAGTACATTATCTGAAGG+AGG | + | chr7_3:31619324-31619343 | Msa1101080:CDS | 40.0% | |
| AGGGGAGACATGAAAGTAAT+TGG | + | chr7_3:31619370-31619389 | Msa1101080:CDS | 40.0% | |
| GGAGACATGAAAGTAATTGG+TGG | + | chr7_3:31619373-31619392 | Msa1101080:CDS | 40.0% | |
| ! | TAACAAGTGGGCACTTGTTA+AGG | - | chr7_3:31619673-31619692 | None:intergenic | 40.0% |
| TAATTCATCGGACGGCTATG+GGG | - | chr7_3:31615718-31615737 | None:intergenic | 45.0% | |
| CTAATTCATCGGACGGCTAT+GGG | - | chr7_3:31615719-31615738 | None:intergenic | 45.0% | |
| GGGAAGAGAGTGATGAATGA+TGG | - | chr7_3:31615800-31615819 | None:intergenic | 45.0% | |
| CTTGCGTTTGAGAATCTGAG+CGG | - | chr7_3:31616075-31616094 | None:intergenic | 45.0% | |
| GTTCGAAGTGAGTTACGAGA+AGG | - | chr7_3:31616100-31616119 | None:intergenic | 45.0% | |
| !! | GGATTTGCTACCTTTAAGGC+GGG | - | chr7_3:31616893-31616912 | None:intergenic | 45.0% |
| !! | CGGATTTGCTACCTTTAAGG+CGG | - | chr7_3:31616894-31616913 | None:intergenic | 45.0% |
| CGCCTTAAAGGTAGCAAATC+CGG | + | chr7_3:31616892-31616911 | Msa1101080:intron | 45.0% | |
| GCCTTAAAGGTAGCAAATCC+GGG | + | chr7_3:31616893-31616912 | Msa1101080:intron | 45.0% | |
| !! | ACCCGGATTTGCTACCTTTA+AGG | - | chr7_3:31616897-31616916 | None:intergenic | 45.0% |
| ! | TAACAATTGGTCTGACCTGC+CGG | + | chr7_3:31617036-31617055 | Msa1101080:intron | 45.0% |
| GAGATCCTGCTTGAATTGAG+AGG | + | chr7_3:31617146-31617165 | Msa1101080:intron | 45.0% | |
| CATGAAACCAGTCGCAGAAT+AGG | + | chr7_3:31617208-31617227 | Msa1101080:intron | 45.0% | |
| TCTACTGCAATCAGGACCTA+AGG | + | chr7_3:31617667-31617686 | Msa1101080:CDS | 45.0% | |
| ATTTAGTAGTGGTCCTCCAC+AGG | + | chr7_3:31617727-31617746 | Msa1101080:CDS | 45.0% | |
| GAAAAACAATGCACCTGTGG+AGG | - | chr7_3:31617743-31617762 | None:intergenic | 45.0% | |
| ATGCTTCTACATTCCCGAAG+AGG | - | chr7_3:31617785-31617804 | None:intergenic | 45.0% | |
| GTACTCCAAGTTGTTGCACA+TGG | + | chr7_3:31617914-31617933 | Msa1101080:CDS | 45.0% | |
| GGTTTCCATGTGCAACAACT+TGG | - | chr7_3:31617922-31617941 | None:intergenic | 45.0% | |
| TCTCTTCACTCTGCAGATTC+CGG | - | chr7_3:31617970-31617989 | None:intergenic | 45.0% | |
| GAATGGCAATATTGCTGTCC+TGG | + | chr7_3:31617988-31618007 | Msa1101080:CDS | 45.0% | |
| TGGTTGTCAACAACTTCCTC+CGG | - | chr7_3:31618031-31618050 | None:intergenic | 45.0% | |
| CATAAGCCACTATACCCAAG+AGG | + | chr7_3:31618081-31618100 | Msa1101080:CDS | 45.0% | |
| TACTGAAACACGGCACTTAG+AGG | - | chr7_3:31618134-31618153 | None:intergenic | 45.0% | |
| TTATTTCAGATTGCCGCAGC+AGG | - | chr7_3:31618236-31618255 | None:intergenic | 45.0% | |
| ! | TTTTGCGCTGCTTATTGAGC+TGG | + | chr7_3:31618298-31618317 | Msa1101080:CDS | 45.0% |
| TTTGCGCTGCTTATTGAGCT+GGG | + | chr7_3:31618299-31618318 | Msa1101080:CDS | 45.0% | |
| ! | GCTTTTGGGCAATTTCACCA+TGG | + | chr7_3:31618348-31618367 | Msa1101080:intron | 45.0% |
| CAACAACAACCCACTAAGTG+GGG | - | chr7_3:31618442-31618461 | None:intergenic | 45.0% | |
| AAAACAGGAGAACCAAGCAG+AGG | - | chr7_3:31618501-31618520 | None:intergenic | 45.0% | |
| TGCATGGCCTTCTTGTGTTT+AGG | + | chr7_3:31618590-31618609 | Msa1101080:intron | 45.0% | |
| AAATGGCCTTTCCATCAGAG+TGG | - | chr7_3:31618857-31618876 | None:intergenic | 45.0% | |
| ATGTCTCCCCTATTAAGAGC+TGG | - | chr7_3:31619361-31619380 | None:intergenic | 45.0% | |
| TAATTCATCGGACGGCTATG+GGG | - | chr7_3:31615718-31615737 | None:intergenic | 45.0% | |
| CTAATTCATCGGACGGCTAT+GGG | - | chr7_3:31615719-31615738 | None:intergenic | 45.0% | |
| GGGAAGAGAGTGATGAATGA+TGG | - | chr7_3:31615800-31615819 | None:intergenic | 45.0% | |
| CTTGCGTTTGAGAATCTGAG+CGG | - | chr7_3:31616075-31616094 | None:intergenic | 45.0% | |
| GTTCGAAGTGAGTTACGAGA+AGG | - | chr7_3:31616100-31616119 | None:intergenic | 45.0% | |
| !! | GGATTTGCTACCTTTAAGGC+GGG | - | chr7_3:31616893-31616912 | None:intergenic | 45.0% |
| !! | CGGATTTGCTACCTTTAAGG+CGG | - | chr7_3:31616894-31616913 | None:intergenic | 45.0% |
| CGCCTTAAAGGTAGCAAATC+CGG | + | chr7_3:31616892-31616911 | Msa1101080:intron | 45.0% | |
| GCCTTAAAGGTAGCAAATCC+GGG | + | chr7_3:31616893-31616912 | Msa1101080:intron | 45.0% | |
| !! | ACCCGGATTTGCTACCTTTA+AGG | - | chr7_3:31616897-31616916 | None:intergenic | 45.0% |
| ! | TAACAATTGGTCTGACCTGC+CGG | + | chr7_3:31617036-31617055 | Msa1101080:intron | 45.0% |
| GAGATCCTGCTTGAATTGAG+AGG | + | chr7_3:31617146-31617165 | Msa1101080:intron | 45.0% | |
| CATGAAACCAGTCGCAGAAT+AGG | + | chr7_3:31617208-31617227 | Msa1101080:intron | 45.0% | |
| TCTACTGCAATCAGGACCTA+AGG | + | chr7_3:31617667-31617686 | Msa1101080:CDS | 45.0% | |
| ATTTAGTAGTGGTCCTCCAC+AGG | + | chr7_3:31617727-31617746 | Msa1101080:CDS | 45.0% | |
| GAAAAACAATGCACCTGTGG+AGG | - | chr7_3:31617743-31617762 | None:intergenic | 45.0% | |
| ATGCTTCTACATTCCCGAAG+AGG | - | chr7_3:31617785-31617804 | None:intergenic | 45.0% | |
| GTACTCCAAGTTGTTGCACA+TGG | + | chr7_3:31617914-31617933 | Msa1101080:CDS | 45.0% | |
| GGTTTCCATGTGCAACAACT+TGG | - | chr7_3:31617922-31617941 | None:intergenic | 45.0% | |
| TCTCTTCACTCTGCAGATTC+CGG | - | chr7_3:31617970-31617989 | None:intergenic | 45.0% | |
| GAATGGCAATATTGCTGTCC+TGG | + | chr7_3:31617988-31618007 | Msa1101080:CDS | 45.0% | |
| TGGTTGTCAACAACTTCCTC+CGG | - | chr7_3:31618031-31618050 | None:intergenic | 45.0% | |
| CATAAGCCACTATACCCAAG+AGG | + | chr7_3:31618081-31618100 | Msa1101080:CDS | 45.0% | |
| TACTGAAACACGGCACTTAG+AGG | - | chr7_3:31618134-31618153 | None:intergenic | 45.0% | |
| TTATTTCAGATTGCCGCAGC+AGG | - | chr7_3:31618236-31618255 | None:intergenic | 45.0% | |
| ! | TTTTGCGCTGCTTATTGAGC+TGG | + | chr7_3:31618298-31618317 | Msa1101080:CDS | 45.0% |
| TTTGCGCTGCTTATTGAGCT+GGG | + | chr7_3:31618299-31618318 | Msa1101080:CDS | 45.0% | |
| ! | GCTTTTGGGCAATTTCACCA+TGG | + | chr7_3:31618348-31618367 | Msa1101080:intron | 45.0% |
| CAACAACAACCCACTAAGTG+GGG | - | chr7_3:31618442-31618461 | None:intergenic | 45.0% | |
| AAAACAGGAGAACCAAGCAG+AGG | - | chr7_3:31618501-31618520 | None:intergenic | 45.0% | |
| TGCATGGCCTTCTTGTGTTT+AGG | + | chr7_3:31618590-31618609 | Msa1101080:intron | 45.0% | |
| AAATGGCCTTTCCATCAGAG+TGG | - | chr7_3:31618857-31618876 | None:intergenic | 45.0% | |
| ATGTCTCCCCTATTAAGAGC+TGG | - | chr7_3:31619361-31619380 | None:intergenic | 45.0% | |
| !! | AATAAATAAAATAATAATTG+GGG | - | chr7_3:31615834-31615853 | None:intergenic | 5.0% |
| !! | AATAAATAAAATAATAATTG+GGG | - | chr7_3:31615834-31615853 | None:intergenic | 5.0% |
| ACAAGTGACACAGCGAGTGA+GGG | - | chr7_3:31615673-31615692 | None:intergenic | 50.0% | |
| AACAAGTGACACAGCGAGTG+AGG | - | chr7_3:31615674-31615693 | None:intergenic | 50.0% | |
| CCTAATTCATCGGACGGCTA+TGG | - | chr7_3:31615720-31615739 | None:intergenic | 50.0% | |
| CCATAGCCGTCCGATGAATT+AGG | + | chr7_3:31615717-31615736 | Msa1101080:five_prime_UTR | 50.0% | |
| AATTGGAAGAAGGTGACGCC+TGG | - | chr7_3:31615777-31615796 | None:intergenic | 50.0% | |
| GGTTGCAGGATTGTGTATCG+TGG | - | chr7_3:31615932-31615951 | None:intergenic | 50.0% | |
| TTCAACAAACTCATGCCGCC+TGG | + | chr7_3:31615982-31616001 | Msa1101080:CDS | 50.0% | |
| TCAACAAACTCATGCCGCCT+GGG | + | chr7_3:31615983-31616002 | Msa1101080:CDS | 50.0% | |
| CGCTCAGATTCTCAAACGCA+AGG | + | chr7_3:31616073-31616092 | Msa1101080:CDS | 50.0% | |
| ! | GATTCAGTGACTTTGGTGGC+AGG | + | chr7_3:31616746-31616765 | Msa1101080:intron | 50.0% |
| !! | CCTTTAAGGCGGGAAATGCA+TGG | - | chr7_3:31616883-31616902 | None:intergenic | 50.0% |
| CCATGCATTTCCCGCCTTAA+AGG | + | chr7_3:31616880-31616899 | Msa1101080:intron | 50.0% | |
| GGCAGGTCAGACCAATTGTT+AGG | - | chr7_3:31617037-31617056 | None:intergenic | 50.0% | |
| TGTCTACCCTATTCTGCGAC+TGG | - | chr7_3:31617218-31617237 | None:intergenic | 50.0% | |
| !! | GTCGCAGTTTGCTGCTATTG+TGG | - | chr7_3:31617572-31617591 | None:intergenic | 50.0% |
| GCTTCTCTCTCACACACCTA+TGG | + | chr7_3:31618200-31618219 | Msa1101080:intron | 50.0% | |
| AGCAGGAACTCGAGAACCAT+AGG | - | chr7_3:31618219-31618238 | None:intergenic | 50.0% | |
| AACAACCCACTAAGTGGGGT+CGG | - | chr7_3:31618438-31618457 | None:intergenic | 50.0% | |
| ! | GCCTGATTGTTTTCTGGGCA+AGG | + | chr7_3:31618472-31618491 | Msa1101080:intron | 50.0% |
| GCCTTGCCCAGAAAACAATC+AGG | - | chr7_3:31618476-31618495 | None:intergenic | 50.0% | |
| GGTATGGTTGTCCACTCTGA+TGG | + | chr7_3:31618843-31618862 | Msa1101080:intron | 50.0% | |
| GGTTGTCCACTCTGATGGAA+AGG | + | chr7_3:31618848-31618867 | Msa1101080:intron | 50.0% | |
| ACAAGTGACACAGCGAGTGA+GGG | - | chr7_3:31615673-31615692 | None:intergenic | 50.0% | |
| AACAAGTGACACAGCGAGTG+AGG | - | chr7_3:31615674-31615693 | None:intergenic | 50.0% | |
| CCTAATTCATCGGACGGCTA+TGG | - | chr7_3:31615720-31615739 | None:intergenic | 50.0% | |
| CCATAGCCGTCCGATGAATT+AGG | + | chr7_3:31615717-31615736 | Msa1101080:five_prime_UTR | 50.0% | |
| AATTGGAAGAAGGTGACGCC+TGG | - | chr7_3:31615777-31615796 | None:intergenic | 50.0% | |
| GGTTGCAGGATTGTGTATCG+TGG | - | chr7_3:31615932-31615951 | None:intergenic | 50.0% | |
| TTCAACAAACTCATGCCGCC+TGG | + | chr7_3:31615982-31616001 | Msa1101080:CDS | 50.0% | |
| TCAACAAACTCATGCCGCCT+GGG | + | chr7_3:31615983-31616002 | Msa1101080:CDS | 50.0% | |
| CGCTCAGATTCTCAAACGCA+AGG | + | chr7_3:31616073-31616092 | Msa1101080:CDS | 50.0% | |
| ! | GATTCAGTGACTTTGGTGGC+AGG | + | chr7_3:31616746-31616765 | Msa1101080:intron | 50.0% |
| !! | CCTTTAAGGCGGGAAATGCA+TGG | - | chr7_3:31616883-31616902 | None:intergenic | 50.0% |
| CCATGCATTTCCCGCCTTAA+AGG | + | chr7_3:31616880-31616899 | Msa1101080:intron | 50.0% | |
| GGCAGGTCAGACCAATTGTT+AGG | - | chr7_3:31617037-31617056 | None:intergenic | 50.0% | |
| TGTCTACCCTATTCTGCGAC+TGG | - | chr7_3:31617218-31617237 | None:intergenic | 50.0% | |
| !! | GTCGCAGTTTGCTGCTATTG+TGG | - | chr7_3:31617572-31617591 | None:intergenic | 50.0% |
| GCTTCTCTCTCACACACCTA+TGG | + | chr7_3:31618200-31618219 | Msa1101080:intron | 50.0% | |
| AGCAGGAACTCGAGAACCAT+AGG | - | chr7_3:31618219-31618238 | None:intergenic | 50.0% | |
| AACAACCCACTAAGTGGGGT+CGG | - | chr7_3:31618438-31618457 | None:intergenic | 50.0% | |
| ! | GCCTGATTGTTTTCTGGGCA+AGG | + | chr7_3:31618472-31618491 | Msa1101080:intron | 50.0% |
| GCCTTGCCCAGAAAACAATC+AGG | - | chr7_3:31618476-31618495 | None:intergenic | 50.0% | |
| GGTATGGTTGTCCACTCTGA+TGG | + | chr7_3:31618843-31618862 | Msa1101080:intron | 50.0% | |
| GGTTGTCCACTCTGATGGAA+AGG | + | chr7_3:31618848-31618867 | Msa1101080:intron | 50.0% | |
| TGACACAGCGAGTGAGGGTT+TGG | - | chr7_3:31615668-31615687 | None:intergenic | 55.0% | |
| ATCGGACGGCTATGGGGATA+TGG | - | chr7_3:31615712-31615731 | None:intergenic | 55.0% | |
| AAGGTGACGCCTGGAAAGGA+AGG | - | chr7_3:31615768-31615787 | None:intergenic | 55.0% | |
| GAAGAAGGTGACGCCTGGAA+AGG | - | chr7_3:31615772-31615791 | None:intergenic | 55.0% | |
| ATCGGAGGTGAGGATGTTGG+TGG | - | chr7_3:31616015-31616034 | None:intergenic | 55.0% | |
| ! | GTTCGAAATTGGAGGCGTGG+CGG | - | chr7_3:31616040-31616059 | None:intergenic | 55.0% |
| CGAGTTCGAAATTGGAGGCG+TGG | - | chr7_3:31616043-31616062 | None:intergenic | 55.0% | |
| ! | TCAGTGACTTTGGTGGCAGG+AGG | + | chr7_3:31616749-31616768 | Msa1101080:intron | 55.0% |
| GTAACATCGGCACTCTCTCG+AGG | - | chr7_3:31617064-31617083 | None:intergenic | 55.0% | |
| AGAGGCAAAAGCAAGCGTGC+AGG | + | chr7_3:31617164-31617183 | Msa1101080:intron | 55.0% | |
| ! | AAGCGTGCAGGCACTGCAAA+AGG | + | chr7_3:31617176-31617195 | Msa1101080:intron | 55.0% |
| TGGTTCTCGAGTTCCTGCTG+CGG | + | chr7_3:31618220-31618239 | Msa1101080:CDS | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr7_3:31618430-31618449 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr7_3:31618429-31618448 | Msa1101080:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr7_3:31618430-31618449 | Msa1101080:intron | 55.0% | |
| TGACACAGCGAGTGAGGGTT+TGG | - | chr7_3:31615668-31615687 | None:intergenic | 55.0% | |
| ATCGGACGGCTATGGGGATA+TGG | - | chr7_3:31615712-31615731 | None:intergenic | 55.0% | |
| AAGGTGACGCCTGGAAAGGA+AGG | - | chr7_3:31615768-31615787 | None:intergenic | 55.0% | |
| GAAGAAGGTGACGCCTGGAA+AGG | - | chr7_3:31615772-31615791 | None:intergenic | 55.0% | |
| ATCGGAGGTGAGGATGTTGG+TGG | - | chr7_3:31616015-31616034 | None:intergenic | 55.0% | |
| ! | GTTCGAAATTGGAGGCGTGG+CGG | - | chr7_3:31616040-31616059 | None:intergenic | 55.0% |
| CGAGTTCGAAATTGGAGGCG+TGG | - | chr7_3:31616043-31616062 | None:intergenic | 55.0% | |
| ! | TCAGTGACTTTGGTGGCAGG+AGG | + | chr7_3:31616749-31616768 | Msa1101080:intron | 55.0% |
| GTAACATCGGCACTCTCTCG+AGG | - | chr7_3:31617064-31617083 | None:intergenic | 55.0% | |
| AGAGGCAAAAGCAAGCGTGC+AGG | + | chr7_3:31617164-31617183 | Msa1101080:intron | 55.0% | |
| ! | AAGCGTGCAGGCACTGCAAA+AGG | + | chr7_3:31617176-31617195 | Msa1101080:intron | 55.0% |
| TGGTTCTCGAGTTCCTGCTG+CGG | + | chr7_3:31618220-31618239 | Msa1101080:CDS | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr7_3:31618430-31618449 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr7_3:31618429-31618448 | Msa1101080:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr7_3:31618430-31618449 | Msa1101080:intron | 55.0% | |
| ACAATCCTGCAACCGCGTCG+CGG | + | chr7_3:31615938-31615957 | Msa1101080:CDS | 60.0% | |
| !! | GATGTTGGTGGCGACATCCC+AGG | - | chr7_3:31616003-31616022 | None:intergenic | 60.0% |
| GCGATCGGAGGTGAGGATGT+TGG | - | chr7_3:31616018-31616037 | None:intergenic | 60.0% | |
| TCGGCACTCTCTCGAGGATC+CGG | - | chr7_3:31617058-31617077 | None:intergenic | 60.0% | |
| GCAGCACAGTGAGCATCTCC+AGG | - | chr7_3:31618009-31618028 | None:intergenic | 60.0% | |
| GGAGATGCTCACTGTGCTGC+CGG | + | chr7_3:31618009-31618028 | Msa1101080:CDS | 60.0% | |
| ! | TGGGCAAGGCATCCTCTGCT+TGG | + | chr7_3:31618486-31618505 | Msa1101080:intron | 60.0% |
| GGGTGAGCTGCCAATGTTCC+TGG | - | chr7_3:31618645-31618664 | None:intergenic | 60.0% | |
| ACAATCCTGCAACCGCGTCG+CGG | + | chr7_3:31615938-31615957 | Msa1101080:CDS | 60.0% | |
| !! | GATGTTGGTGGCGACATCCC+AGG | - | chr7_3:31616003-31616022 | None:intergenic | 60.0% |
| GCGATCGGAGGTGAGGATGT+TGG | - | chr7_3:31616018-31616037 | None:intergenic | 60.0% | |
| TCGGCACTCTCTCGAGGATC+CGG | - | chr7_3:31617058-31617077 | None:intergenic | 60.0% | |
| GCAGCACAGTGAGCATCTCC+AGG | - | chr7_3:31618009-31618028 | None:intergenic | 60.0% | |
| GGAGATGCTCACTGTGCTGC+CGG | + | chr7_3:31618009-31618028 | Msa1101080:CDS | 60.0% | |
| ! | TGGGCAAGGCATCCTCTGCT+TGG | + | chr7_3:31618486-31618505 | Msa1101080:intron | 60.0% |
| GGGTGAGCTGCCAATGTTCC+TGG | - | chr7_3:31618645-31618664 | None:intergenic | 60.0% | |
| ACCGCGTCGCGGCGAATCAA+TGG | + | chr7_3:31615949-31615968 | Msa1101080:CDS | 65.0% | |
| !! | GCCATTGATTCGCCGCGACG+CGG | - | chr7_3:31615953-31615972 | None:intergenic | 65.0% |
| !! | GTTGGTGGCGACATCCCAGG+CGG | - | chr7_3:31616000-31616019 | None:intergenic | 65.0% |
| ! | ATTGGAGGCGTGGCGGCGAT+CGG | - | chr7_3:31616033-31616052 | None:intergenic | 65.0% |
| CACTCTCTCGAGGATCCGGC+AGG | - | chr7_3:31617054-31617073 | None:intergenic | 65.0% | |
| GATGCTCACTGTGCTGCCGG+AGG | + | chr7_3:31618012-31618031 | Msa1101080:CDS | 65.0% | |
| ACCGCGTCGCGGCGAATCAA+TGG | + | chr7_3:31615949-31615968 | Msa1101080:CDS | 65.0% | |
| !! | GCCATTGATTCGCCGCGACG+CGG | - | chr7_3:31615953-31615972 | None:intergenic | 65.0% |
| !! | GTTGGTGGCGACATCCCAGG+CGG | - | chr7_3:31616000-31616019 | None:intergenic | 65.0% |
| ! | ATTGGAGGCGTGGCGGCGAT+CGG | - | chr7_3:31616033-31616052 | None:intergenic | 65.0% |
| CACTCTCTCGAGGATCCGGC+AGG | - | chr7_3:31617054-31617073 | None:intergenic | 65.0% | |
| GATGCTCACTGTGCTGCCGG+AGG | + | chr7_3:31618012-31618031 | Msa1101080:CDS | 65.0% | |
| ATTCGCCGCGACGCGGTTGC+AGG | - | chr7_3:31615946-31615965 | None:intergenic | 70.0% | |
| ATTCGCCGCGACGCGGTTGC+AGG | - | chr7_3:31615946-31615965 | None:intergenic | 70.0% | |
| CGTGGCGGCGATCGGAGGTG+AGG | - | chr7_3:31616025-31616044 | None:intergenic | 75.0% | |
| CGTGGCGGCGATCGGAGGTG+AGG | - | chr7_3:31616025-31616044 | None:intergenic | 75.0% | |
| !! | GGAGGCGTGGCGGCGATCGG+AGG | - | chr7_3:31616030-31616049 | None:intergenic | 80.0% |
| !! | GGAGGCGTGGCGGCGATCGG+AGG | - | chr7_3:31616030-31616049 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 31615658 | 31619744 | 31615658 | ID=Msa1101080;Name=Msa1101080 |
| chr7_3 | mRNA | 31615658 | 31619744 | 31615658 | ID=Msa1101080-mRNA-1;Parent=Msa1101080;Name=Msa1101080-mRNA-1;_AED=0.00;_eAED=0.00;_QI=227|1|1|1|1|1|7|237|334 |
| chr7_3 | exon | 31615658 | 31616094 | 31615658 | ID=Msa1101080-mRNA-1:exon:6743;Parent=Msa1101080-mRNA-1 |
| chr7_3 | exon | 31617650 | 31617748 | 31617650 | ID=Msa1101080-mRNA-1:exon:6744;Parent=Msa1101080-mRNA-1 |
| chr7_3 | exon | 31617878 | 31618102 | 31617878 | ID=Msa1101080-mRNA-1:exon:6745;Parent=Msa1101080-mRNA-1 |
| chr7_3 | exon | 31618201 | 31618320 | 31618201 | ID=Msa1101080-mRNA-1:exon:6746;Parent=Msa1101080-mRNA-1 |
| chr7_3 | exon | 31618612 | 31618695 | 31618612 | ID=Msa1101080-mRNA-1:exon:6747;Parent=Msa1101080-mRNA-1 |
| chr7_3 | exon | 31618784 | 31618843 | 31618784 | ID=Msa1101080-mRNA-1:exon:6748;Parent=Msa1101080-mRNA-1 |
| chr7_3 | exon | 31619301 | 31619744 | 31619301 | ID=Msa1101080-mRNA-1:exon:6749;Parent=Msa1101080-mRNA-1 |
| chr7_3 | five_prime_UTR | 31615658 | 31615884 | 31615658 | ID=Msa1101080-mRNA-1:five_prime_utr;Parent=Msa1101080-mRNA-1 |
| chr7_3 | CDS | 31615885 | 31616094 | 31615885 | ID=Msa1101080-mRNA-1:cds;Parent=Msa1101080-mRNA-1 |
| chr7_3 | CDS | 31617650 | 31617748 | 31617650 | ID=Msa1101080-mRNA-1:cds;Parent=Msa1101080-mRNA-1 |
| chr7_3 | CDS | 31617878 | 31618102 | 31617878 | ID=Msa1101080-mRNA-1:cds;Parent=Msa1101080-mRNA-1 |
| chr7_3 | CDS | 31618201 | 31618320 | 31618201 | ID=Msa1101080-mRNA-1:cds;Parent=Msa1101080-mRNA-1 |
| chr7_3 | CDS | 31618612 | 31618695 | 31618612 | ID=Msa1101080-mRNA-1:cds;Parent=Msa1101080-mRNA-1 |
| chr7_3 | CDS | 31618784 | 31618843 | 31618784 | ID=Msa1101080-mRNA-1:cds;Parent=Msa1101080-mRNA-1 |
| chr7_3 | CDS | 31619301 | 31619507 | 31619301 | ID=Msa1101080-mRNA-1:cds;Parent=Msa1101080-mRNA-1 |
| chr7_3 | three_prime_UTR | 31619508 | 31619744 | 31619508 | ID=Msa1101080-mRNA-1:three_prime_utr;Parent=Msa1101080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
