Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101920 | XP_027188904.1 | 55.310 | 226 | 68 | 6 | 5 | 199 | 65 | 288 | 9.76e-65 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101920 | A0A3Q7X5E5 | 55.310 | 226 | 68 | 6 | 5 | 199 | 65 | 288 | 4.66e-65 | 211 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1101910 | Msa1101920 | 0.827412 | 1.586902e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101920 | MtrunA17_Chr7g0231021 | 53.070 | 228 | 75 | 5 | 6 | 203 | 10 | 235 | 6.98e-65 | 200 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 31 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAAAGAAGTTGAAAATTT+TGG | 0.047332 | 7_3:+33220773 | None:intergenic |
| AGTAACCACCAAGCCATTAT+TGG | 0.262755 | 7_3:+33220736 | None:intergenic |
| GATTTAGCAAATTCCAATAA+TGG | 0.292459 | 7_3:-33220749 | Msa1101920:CDS |
| TGGGTGAAATGAACTTTAAT+TGG | 0.321128 | 7_3:-33220799 | Msa1101920:CDS |
| AAGATAGAGTCTTCAAATTC+AGG | 0.329055 | 7_3:+33220848 | None:intergenic |
| TGAAGTTTGCGACCAAGATA+TGG | 0.370010 | 7_3:+33220919 | None:intergenic |
| TCAGAATCATTAACAAGAAC+TGG | 0.378002 | 7_3:+33221182 | None:intergenic |
| CTATCTTGGTGAATGTTGAT+TGG | 0.387856 | 7_3:-33220832 | Msa1101920:CDS |
| TGGATATCCTCTGTATATCT+TGG | 0.390126 | 7_3:+33221126 | None:intergenic |
| TGAATTTGAAGACTCTATCT+TGG | 0.404281 | 7_3:-33220846 | Msa1101920:CDS |
| TGATTCTGATGTTGTTAGAA+AGG | 0.424151 | 7_3:-33221168 | Msa1101920:CDS |
| AGCAAATTCCAATAATGGCT+TGG | 0.432791 | 7_3:-33220744 | Msa1101920:CDS |
| AATGAAGAAGTCTCTTAAAC+CGG | 0.439906 | 7_3:-33220654 | Msa1101920:CDS |
| TATCTTGGTGAATGTTGATT+GGG | 0.446473 | 7_3:-33220831 | Msa1101920:CDS |
| ATCAGGTTCATCACTTCTAA+TGG | 0.446507 | 7_3:-33221210 | Msa1101920:CDS |
| TTTGTGTTTAGCTCTAATAC+AGG | 0.448926 | 7_3:+33220614 | None:intergenic |
| GGATTATCAAATAGATAATC+CGG | 0.459111 | 7_3:+33220635 | None:intergenic |
| TGTTGATTGGGATCTGCGTA+TGG | 0.482377 | 7_3:-33220819 | Msa1101920:CDS |
| AGATAGAGTCTTCAAATTCA+GGG | 0.508885 | 7_3:+33220849 | None:intergenic |
| TAATCAGAGTTCAGTACAAT+CGG | 0.518306 | 7_3:-33220561 | Msa1101920:CDS |
| TCTCGATTCAACTTCATGAA+AGG | 0.532761 | 7_3:-33221074 | Msa1101920:intron |
| CTCTCAAACTTATTGACACA+GGG | 0.544383 | 7_3:+33220882 | None:intergenic |
| AAATTCCAATAATGGCTTGG+TGG | 0.556308 | 7_3:-33220741 | Msa1101920:CDS |
| TAGATATGTAGAAGAATCTG+AGG | 0.568401 | 7_3:+33220706 | None:intergenic |
| TTGCTTATAAATGTTACTTG+TGG | 0.588984 | 7_3:+33221106 | None:intergenic |
| TCTCTCAAACTTATTGACAC+AGG | 0.599143 | 7_3:+33220881 | None:intergenic |
| ATATCTAAAAGTTAAGTACA+AGG | 0.610992 | 7_3:-33220690 | Msa1101920:CDS |
| GTTGATTGGGATCTGCGTAT+GGG | 0.637017 | 7_3:-33220818 | Msa1101920:CDS |
| TCAGAGTTCAGTACAATCGG+TGG | 0.645978 | 7_3:-33220558 | Msa1101920:CDS |
| AGATATGTAGAAGAATCTGA+GGG | 0.664870 | 7_3:+33220707 | None:intergenic |
| TTCACAACCAAGATATACAG+AGG | 0.680206 | 7_3:-33221133 | Msa1101920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAAATTTATTGCTT+TGG | + | chr7_3:33223392-33223411 | None:intergenic | 10.0% |
| !!! | ATAAGCAAATTTTATTTTTT+AGG | + | chr7_3:33223855-33223874 | None:intergenic | 10.0% |
| !!! | TTTTTTATTTTAATTGCAAG+CGG | + | chr7_3:33222434-33222453 | None:intergenic | 15.0% |
| !! | AAAAAAATTGGATGATATAT+TGG | + | chr7_3:33223478-33223497 | None:intergenic | 15.0% |
| !! | TGAATCTAAAAAGTAAAATT+TGG | + | chr7_3:33223739-33223758 | None:intergenic | 15.0% |
| !!! | AATTTGCTTATAAAAAGAAA+CGG | - | chr7_3:33223864-33223883 | Msa1101920:intron | 15.0% |
| !! | TAGAAAGAAAAAAAAATACT+TGG | + | chr7_3:33224038-33224057 | None:intergenic | 15.0% |
| !!! | AGCAATTGTTTTAAAAACAT+AGG | + | chr7_3:33223275-33223294 | None:intergenic | 20.0% |
| !! | TATACTAAATAATATATGCG+TGG | + | chr7_3:33223690-33223709 | None:intergenic | 20.0% |
| !! | CATCTAATTAATGATGTATA+TGG | - | chr7_3:33223757-33223776 | Msa1101920:intron | 20.0% |
| !! | AAAATGTGATATTATTGCTT+GGG | + | chr7_3:33223908-33223927 | None:intergenic | 20.0% |
| !!! | ACTTTAGAAAGAAAATAAGT+TGG | + | chr7_3:33223984-33224003 | None:intergenic | 20.0% |
| !!! | AAAAATCATTATTCAAGTTC+CGG | - | chr7_3:33224322-33224341 | Msa1101920:intron | 20.0% |
| !!! | TAAATTTTTACATATTGGGT+TGG | - | chr7_3:33224400-33224419 | Msa1101920:intron | 20.0% |
| !! | ATATCTAAAAGTTAAGTACA+AGG | - | chr7_3:33224661-33224680 | Msa1101920:intron | 20.0% |
| !!! | ATTGTCTGCTTTTTATACTT+GGG | + | chr7_3:33220740-33220759 | None:intergenic | 25.0% |
| !!! | TATTGTCTGCTTTTTATACT+TGG | + | chr7_3:33220741-33220760 | None:intergenic | 25.0% |
| ! | GTAAAAAGGGAATTTACTTT+GGG | + | chr7_3:33220805-33220824 | None:intergenic | 25.0% |
| !! | GTTCTCTAAATTATGAGTTT+TGG | + | chr7_3:33221103-33221122 | None:intergenic | 25.0% |
| ! | TATAGTACAACCAAAATGTT+AGG | - | chr7_3:33221207-33221226 | Msa1101920:CDS | 25.0% |
| !! | GTAGTATTTTCCTAACATTT+TGG | + | chr7_3:33221220-33221239 | None:intergenic | 25.0% |
| !!! | TGTCTTATTTTATGACTTGT+TGG | + | chr7_3:33221249-33221268 | None:intergenic | 25.0% |
| ! | TCTTATTGTAAATGTGTGTA+TGG | - | chr7_3:33223299-33223318 | Msa1101920:intron | 25.0% |
| ! | AAACCACATACATCATTAAT+TGG | + | chr7_3:33223797-33223816 | None:intergenic | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | + | chr7_3:33223830-33223849 | None:intergenic | 25.0% |
| ! | GAAAATGTGATATTATTGCT+TGG | + | chr7_3:33223909-33223928 | None:intergenic | 25.0% |
| !! | TTGCTTATAAATGTTACTTG+TGG | + | chr7_3:33224248-33224267 | None:intergenic | 25.0% |
| !! | CCAAAGAAGTTGAAAATTTT+GGG | + | chr7_3:33224580-33224599 | None:intergenic | 25.0% |
| ! | GATTTAGCAAATTCCAATAA+TGG | - | chr7_3:33224602-33224621 | Msa1101920:intron | 25.0% |
| ! | GGATTATCAAATAGATAATC+CGG | + | chr7_3:33224719-33224738 | None:intergenic | 25.0% |
| GCATTGTGAAATGAATATGT+TGG | - | chr7_3:33220574-33220593 | Msa1101920:CDS | 30.0% | |
| GGTAAAAAGGGAATTTACTT+TGG | + | chr7_3:33220806-33220825 | None:intergenic | 30.0% | |
| !!! | GTTTTGGTTGAATGAATGAA+TGG | + | chr7_3:33221087-33221106 | None:intergenic | 30.0% |
| GTACTATATTTACATTTGCG+CGG | + | chr7_3:33221195-33221214 | None:intergenic | 30.0% | |
| TTGCTTTGGCTAAAAAACAT+AGG | + | chr7_3:33223378-33223397 | None:intergenic | 30.0% | |
| ATTTCACATTAGCCAATGTA+AGG | - | chr7_3:33223422-33223441 | Msa1101920:intron | 30.0% | |
| !!! | TTCAGTGGTTTTTAAAACAG+GGG | + | chr7_3:33223639-33223658 | None:intergenic | 30.0% |
| !!! | GTTCAGTGGTTTTTAAAACA+GGG | + | chr7_3:33223640-33223659 | None:intergenic | 30.0% |
| !!! | TGTTCAGTGGTTTTTAAAAC+AGG | + | chr7_3:33223641-33223660 | None:intergenic | 30.0% |
| AAAAGGAAAACTTTGTTCAG+TGG | + | chr7_3:33223654-33223673 | None:intergenic | 30.0% | |
| CATCCAATTAATGATGTATG+TGG | - | chr7_3:33223791-33223810 | Msa1101920:intron | 30.0% | |
| TTGCTTATAAAAAGAAACGG+AGG | - | chr7_3:33223867-33223886 | Msa1101920:intron | 30.0% | |
| TGCTTATAAAAAGAAACGGA+GGG | - | chr7_3:33223868-33223887 | Msa1101920:intron | 30.0% | |
| ATATATGAGTGATGAGAACT+TGG | + | chr7_3:33223952-33223971 | None:intergenic | 30.0% | |
| AATGTAGAGATTAAGCAACA+AGG | + | chr7_3:33224008-33224027 | None:intergenic | 30.0% | |
| ATGTAGAGATTAAGTAGCAA+AGG | + | chr7_3:33224066-33224085 | None:intergenic | 30.0% | |
| TCAGAATCATTAACAAGAAC+TGG | + | chr7_3:33224172-33224191 | None:intergenic | 30.0% | |
| TGATTCTGATGTTGTTAGAA+AGG | - | chr7_3:33224183-33224202 | Msa1101920:intron | 30.0% | |
| AGTTAGCAAATATACATCTC+CGG | + | chr7_3:33224344-33224363 | None:intergenic | 30.0% | |
| ! | TGTATATTTGCTAACTAGCT+AGG | - | chr7_3:33224348-33224367 | Msa1101920:intron | 30.0% |
| ! | GTATATTTGCTAACTAGCTA+GGG | - | chr7_3:33224349-33224368 | Msa1101920:intron | 30.0% |
| ! | TGGTACAATTTTCCATATCT+TGG | - | chr7_3:33224420-33224439 | Msa1101920:intron | 30.0% |
| AGATAGAGTCTTCAAATTCA+GGG | + | chr7_3:33224505-33224524 | None:intergenic | 30.0% | |
| AAGATAGAGTCTTCAAATTC+AGG | + | chr7_3:33224506-33224525 | None:intergenic | 30.0% | |
| TGAATTTGAAGACTCTATCT+TGG | - | chr7_3:33224505-33224524 | Msa1101920:intron | 30.0% | |
| ! | TATCTTGGTGAATGTTGATT+GGG | - | chr7_3:33224520-33224539 | Msa1101920:intron | 30.0% |
| TGGGTGAAATGAACTTTAAT+TGG | - | chr7_3:33224552-33224571 | Msa1101920:intron | 30.0% | |
| ! | CCCAAAATTTTCAACTTCTT+TGG | - | chr7_3:33224577-33224596 | Msa1101920:intron | 30.0% |
| ! | GCCAAAGAAGTTGAAAATTT+TGG | + | chr7_3:33224581-33224600 | None:intergenic | 30.0% |
| AGATATGTAGAAGAATCTGA+GGG | + | chr7_3:33224647-33224666 | None:intergenic | 30.0% | |
| TAGATATGTAGAAGAATCTG+AGG | + | chr7_3:33224648-33224667 | None:intergenic | 30.0% | |
| AATGAAGAAGTCTCTTAAAC+CGG | - | chr7_3:33224697-33224716 | Msa1101920:intron | 30.0% | |
| !! | TTTGTGTTTAGCTCTAATAC+AGG | + | chr7_3:33224740-33224759 | None:intergenic | 30.0% |
| TAATCAGAGTTCAGTACAAT+CGG | - | chr7_3:33224790-33224809 | Msa1101920:intron | 30.0% | |
| ATAAAATAACCTCGTCACTG+AGG | + | chr7_3:33220600-33220619 | None:intergenic | 35.0% | |
| !!! | TATTGTTTTGGACTAGTCCA+TGG | - | chr7_3:33220688-33220707 | Msa1101920:CDS | 35.0% |
| !!! | TCTGCTTTTTATACTTGGGT+CGG | + | chr7_3:33220736-33220755 | None:intergenic | 35.0% |
| AATACTGCTCTTTACCCAAT+TGG | - | chr7_3:33220768-33220787 | Msa1101920:CDS | 35.0% | |
| GTAATGACCTGCAATGAATT+GGG | - | chr7_3:33221429-33221448 | Msa1101920:intron | 35.0% | |
| TATTCTTGTTGATCAGGAGT+GGG | + | chr7_3:33221466-33221485 | None:intergenic | 35.0% | |
| ATATTCTTGTTGATCAGGAG+TGG | + | chr7_3:33221467-33221486 | None:intergenic | 35.0% | |
| ATTCAGATAGGTACATTAGG+TGG | + | chr7_3:33221569-33221588 | None:intergenic | 35.0% | |
| AGCATTCAGATAGGTACATT+AGG | + | chr7_3:33221572-33221591 | None:intergenic | 35.0% | |
| ATTCAGAGGAAACTCCAAAA+AGG | - | chr7_3:33221644-33221663 | Msa1101920:intron | 35.0% | |
| ! | TCTGTCTTTTTGTGTTTGCA+GGG | + | chr7_3:33222026-33222045 | None:intergenic | 35.0% |
| ! | ATCTGTCTTTTTGTGTTTGC+AGG | + | chr7_3:33222027-33222046 | None:intergenic | 35.0% |
| !!! | ATGTCACTTTTACCGAACTT+CGG | + | chr7_3:33222754-33222773 | None:intergenic | 35.0% |
| GGTAAAAGTGACATCTCATA+AGG | - | chr7_3:33222760-33222779 | Msa1101920:intron | 35.0% | |
| TCCTAATGGTAGTTTACGAA+GGG | + | chr7_3:33223172-33223191 | None:intergenic | 35.0% | |
| TTCCTAATGGTAGTTTACGA+AGG | + | chr7_3:33223173-33223192 | None:intergenic | 35.0% | |
| GATATTATTGCTTGGGAACA+AGG | + | chr7_3:33223901-33223920 | None:intergenic | 35.0% | |
| ATCAGGTTCATCACTTCTAA+TGG | - | chr7_3:33224141-33224160 | Msa1101920:intron | 35.0% | |
| TTCACAACCAAGATATACAG+AGG | - | chr7_3:33224218-33224237 | Msa1101920:intron | 35.0% | |
| TGGATATCCTCTGTATATCT+TGG | + | chr7_3:33224228-33224247 | None:intergenic | 35.0% | |
| TCTCGATTCAACTTCATGAA+AGG | - | chr7_3:33224277-33224296 | Msa1101920:intron | 35.0% | |
| CTCTCAAACTTATTGACACA+GGG | + | chr7_3:33224472-33224491 | None:intergenic | 35.0% | |
| TCTCTCAAACTTATTGACAC+AGG | + | chr7_3:33224473-33224492 | None:intergenic | 35.0% | |
| CTATCTTGGTGAATGTTGAT+TGG | - | chr7_3:33224519-33224538 | Msa1101920:intron | 35.0% | |
| AGCAAATTCCAATAATGGCT+TGG | - | chr7_3:33224607-33224626 | Msa1101920:intron | 35.0% | |
| ! | AAATTCCAATAATGGCTTGG+TGG | - | chr7_3:33224610-33224629 | Msa1101920:intron | 35.0% |
| GGGAATGAGCAAATCCAATT+GGG | + | chr7_3:33220785-33220804 | None:intergenic | 40.0% | |
| TGGGAATGAGCAAATCCAAT+TGG | + | chr7_3:33220786-33220805 | None:intergenic | 40.0% | |
| AAGTCGCGTAAGGGTAAAAA+GGG | + | chr7_3:33220818-33220837 | None:intergenic | 40.0% | |
| TAAGTCGCGTAAGGGTAAAA+AGG | + | chr7_3:33220819-33220838 | None:intergenic | 40.0% | |
| CGAAGGAACGAAGATAAACA+GGG | + | chr7_3:33221043-33221062 | None:intergenic | 40.0% | |
| ACGAAGGAACGAAGATAAAC+AGG | + | chr7_3:33221044-33221063 | None:intergenic | 40.0% | |
| TCCTTCGTTCGTTCATACAT+AGG | - | chr7_3:33221056-33221075 | Msa1101920:intron | 40.0% | |
| ACCTATGTATGAACGAACGA+AGG | + | chr7_3:33221060-33221079 | None:intergenic | 40.0% | |
| CTGCTCAAACACGCTATAAT+CGG | - | chr7_3:33221317-33221336 | Msa1101920:intron | 40.0% | |
| ! | CTCTTCTTCAGCATTTTGGA+AGG | + | chr7_3:33221351-33221370 | None:intergenic | 40.0% |
| TCCAAAATGCTGAAGAAGAG+TGG | - | chr7_3:33221351-33221370 | Msa1101920:intron | 40.0% | |
| ! | TCCACTCTTCTTCAGCATTT+TGG | + | chr7_3:33221355-33221374 | None:intergenic | 40.0% |
| GGTAATGACCTGCAATGAAT+TGG | - | chr7_3:33221428-33221447 | Msa1101920:intron | 40.0% | |
| CCAGGATATTCTTGTTGATC+AGG | + | chr7_3:33221472-33221491 | None:intergenic | 40.0% | |
| CCTGATCAACAAGAATATCC+TGG | - | chr7_3:33221469-33221488 | Msa1101920:intron | 40.0% | |
| ACAAGAATATCCTGGTAGAC+AGG | - | chr7_3:33221477-33221496 | Msa1101920:intron | 40.0% | |
| TACCTATCTGAATGCTTCCA+AGG | - | chr7_3:33221576-33221595 | Msa1101920:intron | 40.0% | |
| ! | AAAGGCATAACCGTAGTAGA+AGG | - | chr7_3:33221690-33221709 | Msa1101920:intron | 40.0% |
| GCAGTACAAACATGTTCAGA+GGG | + | chr7_3:33221724-33221743 | None:intergenic | 40.0% | |
| TACCAGCACACATCTTGAAA+AGG | - | chr7_3:33221807-33221826 | Msa1101920:intron | 40.0% | |
| GTAGATGGAAACCTAAAAGG+GGG | + | chr7_3:33221926-33221945 | None:intergenic | 40.0% | |
| GGTAGATGGAAACCTAAAAG+GGG | + | chr7_3:33221927-33221946 | None:intergenic | 40.0% | |
| GGGTAGATGGAAACCTAAAA+GGG | + | chr7_3:33221928-33221947 | None:intergenic | 40.0% | |
| TGGGTAGATGGAAACCTAAA+AGG | + | chr7_3:33221929-33221948 | None:intergenic | 40.0% | |
| TCACCAGCATATCTACAACA+TGG | - | chr7_3:33222099-33222118 | Msa1101920:intron | 40.0% | |
| TGACCATGTTGTAGATATGC+TGG | + | chr7_3:33222105-33222124 | None:intergenic | 40.0% | |
| GGTATGATATCATCAACCAC+GGG | + | chr7_3:33222277-33222296 | None:intergenic | 40.0% | |
| GGGTATGATATCATCAACCA+CGG | + | chr7_3:33222278-33222297 | None:intergenic | 40.0% | |
| TGATATCATACCCAGTCAGA+AGG | - | chr7_3:33222285-33222304 | Msa1101920:intron | 40.0% | |
| !! | TAGAAGATAACCGTTGGTTC+TGG | + | chr7_3:33222343-33222362 | None:intergenic | 40.0% |
| ATCATGCTCAGTTTCACGAA+GGG | + | chr7_3:33222912-33222931 | None:intergenic | 40.0% | |
| TATCATGCTCAGTTTCACGA+AGG | + | chr7_3:33222913-33222932 | None:intergenic | 40.0% | |
| TGATTAGCATTATCACGAGC+AGG | + | chr7_3:33223004-33223023 | None:intergenic | 40.0% | |
| ! | CGTGATAATGCTAATCATGC+CGG | - | chr7_3:33223007-33223026 | Msa1101920:intron | 40.0% |
| TTGATACTGTTGATGCTGCA+GGG | + | chr7_3:33223083-33223102 | None:intergenic | 40.0% | |
| TCCCTTCGTAAACTACCATT+AGG | - | chr7_3:33223168-33223187 | Msa1101920:intron | 40.0% | |
| TTGTGCAAATATGTCTGAGC+AGG | + | chr7_3:33223229-33223248 | None:intergenic | 40.0% | |
| !! | AAATGTGTGTATGGTGCTGT+TGG | - | chr7_3:33223308-33223327 | Msa1101920:intron | 40.0% |
| !! | TTGGTGTTGGAATGGTTGAT+CGG | - | chr7_3:33223327-33223346 | Msa1101920:intron | 40.0% |
| TAAAACAGGGGAAGGTAAAG+CGG | + | chr7_3:33223627-33223646 | None:intergenic | 40.0% | |
| !!! | GTGGTTTTTAAAACAGGGGA+AGG | + | chr7_3:33223635-33223654 | None:intergenic | 40.0% |
| TTCTACGTATGTTGCAGATC+AGG | - | chr7_3:33224124-33224143 | Msa1101920:intron | 40.0% | |
| TGAAGTTTGCGACCAAGATA+TGG | + | chr7_3:33224435-33224454 | None:intergenic | 40.0% | |
| AGTAACCACCAAGCCATTAT+TGG | + | chr7_3:33224618-33224637 | None:intergenic | 40.0% | |
| GCGTATGTTAAGTCGCGTAA+GGG | + | chr7_3:33220827-33220846 | None:intergenic | 45.0% | |
| TGCGTATGTTAAGTCGCGTA+AGG | + | chr7_3:33220828-33220847 | None:intergenic | 45.0% | |
| ATGACCTGCAATGAATTGGG+AGG | - | chr7_3:33221432-33221451 | Msa1101920:intron | 45.0% | |
| ACATCCTCCCAATTCATTGC+AGG | + | chr7_3:33221439-33221458 | None:intergenic | 45.0% | |
| CAATGAATTGGGAGGATGTC+TGG | - | chr7_3:33221440-33221459 | Msa1101920:intron | 45.0% | |
| ATATCCTGGTAGACAGGTCT+CGG | - | chr7_3:33221483-33221502 | Msa1101920:intron | 45.0% | |
| !! | AGCCTTGGAAGCATTCAGAT+AGG | + | chr7_3:33221581-33221600 | None:intergenic | 45.0% |
| GCATAACCGTAGTAGAAGGT+CGG | - | chr7_3:33221694-33221713 | Msa1101920:intron | 45.0% | |
| CATAACCGTAGTAGAAGGTC+GGG | - | chr7_3:33221695-33221714 | Msa1101920:intron | 45.0% | |
| ATAACCGTAGTAGAAGGTCG+GGG | - | chr7_3:33221696-33221715 | Msa1101920:intron | 45.0% | |
| GGCAGTACAAACATGTTCAG+AGG | + | chr7_3:33221725-33221744 | None:intergenic | 45.0% | |
| ! | ACCCACCATCCTTTGTTTGT+CGG | - | chr7_3:33221767-33221786 | Msa1101920:intron | 45.0% |
| !! | CACCTTTTCAAGATGTGTGC+TGG | + | chr7_3:33221812-33221831 | None:intergenic | 45.0% |
| !! | AGCATTGTTTTGTCACCTGG+AGG | + | chr7_3:33221860-33221879 | None:intergenic | 45.0% |
| !!! | TGGAGCATTGTTTTGTCACC+TGG | + | chr7_3:33221863-33221882 | None:intergenic | 45.0% |
| ACATCAGACATGTCGTTCTG+AGG | + | chr7_3:33221989-33222008 | None:intergenic | 45.0% | |
| CTTCCTCCACCAGAAACAAT+AGG | - | chr7_3:33222072-33222091 | Msa1101920:intron | 45.0% | |
| !! | TCACCTATTGTTTCTGGTGG+AGG | + | chr7_3:33222078-33222097 | None:intergenic | 45.0% |
| !! | GACTCACCTATTGTTTCTGG+TGG | + | chr7_3:33222081-33222100 | None:intergenic | 45.0% |
| GGTGACTCACCTATTGTTTC+TGG | + | chr7_3:33222084-33222103 | None:intergenic | 45.0% | |
| ! | GATGATGTGGCTTGTCTTCT+AGG | + | chr7_3:33222173-33222192 | None:intergenic | 45.0% |
| TTTGTGTTATGGCCGAGAGA+TGG | + | chr7_3:33222250-33222269 | None:intergenic | 45.0% | |
| !! | CCACGGGTTAGTTTGTGTTA+TGG | + | chr7_3:33222261-33222280 | None:intergenic | 45.0% |
| CCATAACACAAACTAACCCG+TGG | - | chr7_3:33222258-33222277 | Msa1101920:intron | 45.0% | |
| TATCATACCCAGTCAGAAGG+AGG | - | chr7_3:33222288-33222307 | Msa1101920:intron | 45.0% | |
| ATCATACCCAGTCAGAAGGA+GGG | - | chr7_3:33222289-33222308 | Msa1101920:intron | 45.0% | |
| TGCAGGTAGAAGATAACCGT+TGG | + | chr7_3:33222349-33222368 | None:intergenic | 45.0% | |
| CGGTTATCTTCTACCTGCAA+CGG | - | chr7_3:33222350-33222369 | Msa1101920:intron | 45.0% | |
| TTATCTTCTACCTGCAACGG+AGG | - | chr7_3:33222353-33222372 | Msa1101920:intron | 45.0% | |
| TATCTTCTACCTGCAACGGA+GGG | - | chr7_3:33222354-33222373 | Msa1101920:intron | 45.0% | |
| ! | CAAGCGGATCATAAGTTGAC+TGG | + | chr7_3:33222418-33222437 | None:intergenic | 45.0% |
| AACACGTGTCATGCAGACTT+TGG | + | chr7_3:33222729-33222748 | None:intergenic | 45.0% | |
| GACACGTGTTTACCGAAGTT+CGG | - | chr7_3:33222739-33222758 | Msa1101920:intron | 45.0% | |
| CTGTTATGGAAGACGAGGAT+GGG | + | chr7_3:33222801-33222820 | None:intergenic | 45.0% | |
| AAAGCCTGTTATGGAAGACG+AGG | + | chr7_3:33222806-33222825 | None:intergenic | 45.0% | |
| GCAACATGCAAAGCCTGTTA+TGG | + | chr7_3:33222815-33222834 | None:intergenic | 45.0% | |
| GAAACTGAGCATGATACCCT+AGG | - | chr7_3:33222917-33222936 | Msa1101920:intron | 45.0% | |
| ! | AGGGGTATGAGTATCACCTA+GGG | + | chr7_3:33222936-33222955 | None:intergenic | 45.0% |
| TGATAACCCGGCTGAAATTC+AGG | - | chr7_3:33222964-33222983 | Msa1101920:intron | 45.0% | |
| TTATCACGAGCAGGCTTATC+AGG | + | chr7_3:33222995-33223014 | None:intergenic | 45.0% | |
| GATAGGTGCATCCCATATTG+TGG | + | chr7_3:33223046-33223065 | None:intergenic | 45.0% | |
| TGATACTGTTGATGCTGCAG+GGG | + | chr7_3:33223082-33223101 | None:intergenic | 45.0% | |
| CTTGATACTGTTGATGCTGC+AGG | + | chr7_3:33223084-33223103 | None:intergenic | 45.0% | |
| TGGTAGTTTACGAAGGGAGA+TGG | + | chr7_3:33223166-33223185 | None:intergenic | 45.0% | |
| GGAGAGGACTGACAGATTTA+GGG | + | chr7_3:33223208-33223227 | None:intergenic | 45.0% | |
| AGGAGAGGACTGACAGATTT+AGG | + | chr7_3:33223209-33223228 | None:intergenic | 45.0% | |
| CAAATATGTCTGAGCAGGAG+AGG | + | chr7_3:33223224-33223243 | None:intergenic | 45.0% | |
| ! | GAATGGTTGATCGGCTTAAC+AGG | - | chr7_3:33223336-33223355 | Msa1101920:intron | 45.0% |
| TTAGCCAATGTAAGGTGACG+TGG | - | chr7_3:33223430-33223449 | Msa1101920:intron | 45.0% | |
| TAGCCAATGTAAGGTGACGT+GGG | - | chr7_3:33223431-33223450 | Msa1101920:intron | 45.0% | |
| GTGGCAACAACAGAGAGAAA+AGG | + | chr7_3:33223671-33223690 | None:intergenic | 45.0% | |
| ACTTGGTTGCGAATGAAGGA+GGG | + | chr7_3:33223935-33223954 | None:intergenic | 45.0% | |
| AACTTGGTTGCGAATGAAGG+AGG | + | chr7_3:33223936-33223955 | None:intergenic | 45.0% | |
| GAGAACTTGGTTGCGAATGA+AGG | + | chr7_3:33223939-33223958 | None:intergenic | 45.0% | |
| ! | TGTTGATTGGGATCTGCGTA+TGG | - | chr7_3:33224532-33224551 | Msa1101920:intron | 45.0% |
| GTTGATTGGGATCTGCGTAT+GGG | - | chr7_3:33224533-33224552 | Msa1101920:intron | 45.0% | |
| TCAGAGTTCAGTACAATCGG+TGG | - | chr7_3:33224793-33224812 | Msa1101920:intron | 45.0% | |
| !! | AATTAAATTTAAGTATTTAT+AGG | + | chr7_3:33220635-33220654 | None:intergenic | 5.0% |
| !!! | TTTATTAATATTTATTGTTT+TGG | - | chr7_3:33220676-33220695 | Msa1101920:CDS | 5.0% |
| !!! | TTATTTTACTAATTTAAATT+TGG | + | chr7_3:33222459-33222478 | None:intergenic | 5.0% |
| !!! | AATTGTTTTATTTAATTTAA+TGG | + | chr7_3:33222686-33222705 | None:intergenic | 5.0% |
| !! | ATAAAATGATAAAAAAAAAT+TGG | + | chr7_3:33223490-33223509 | None:intergenic | 5.0% |
| !!! | AAATATAAATTTTTACATAT+TGG | - | chr7_3:33224395-33224414 | Msa1101920:intron | 5.0% |
| !!! | AATATAAATTTTTACATATT+GGG | - | chr7_3:33224396-33224415 | Msa1101920:intron | 5.0% |
| ! | ATATGTTGGCCTCAGTGACG+AGG | - | chr7_3:33220588-33220607 | Msa1101920:CDS | 50.0% |
| ! | AGCTTAGTTGGATTGGGCCA+TGG | + | chr7_3:33220708-33220727 | None:intergenic | 50.0% |
| TGGCCCAATCCAACTAAGCT+CGG | - | chr7_3:33220708-33220727 | Msa1101920:CDS | 50.0% | |
| GACCCGAGCTTAGTTGGATT+GGG | + | chr7_3:33220714-33220733 | None:intergenic | 50.0% | |
| AAGCTACTGCCTGTCTGTTC+TGG | + | chr7_3:33221010-33221029 | None:intergenic | 50.0% | |
| ! | AGTGGATTTGCAACCACCTC+TGG | - | chr7_3:33221369-33221388 | Msa1101920:intron | 50.0% |
| GGTCTCGGTATGACATTGTC+AGG | - | chr7_3:33221498-33221517 | Msa1101920:intron | 50.0% | |
| GGTATGACATTGTCAGGCTC+TGG | - | chr7_3:33221504-33221523 | Msa1101920:intron | 50.0% | |
| AGGGTTGACGAAGAGAGGAT+GGG | - | chr7_3:33221530-33221549 | Msa1101920:intron | 50.0% | |
| CGAAGAGAGGATGGGATACA+CGG | - | chr7_3:33221538-33221557 | Msa1101920:intron | 50.0% | |
| ! | TGTCGTTTCCCAGCAGATGA+GGG | + | chr7_3:33221625-33221644 | None:intergenic | 50.0% |
| ! | ATGTCGTTTCCCAGCAGATG+AGG | + | chr7_3:33221626-33221645 | None:intergenic | 50.0% |
| TGCTGGGAAACGACATTCAG+AGG | - | chr7_3:33221630-33221649 | Msa1101920:intron | 50.0% | |
| ! | AGATGTGGCTGCTGCCTTTT+TGG | + | chr7_3:33221661-33221680 | None:intergenic | 50.0% |
| GCCGACAAACAAAGGATGGT+GGG | + | chr7_3:33221771-33221790 | None:intergenic | 50.0% | |
| CATGGCCGACAAACAAAGGA+TGG | + | chr7_3:33221775-33221794 | None:intergenic | 50.0% | |
| GGATCATGGCCGACAAACAA+AGG | + | chr7_3:33221779-33221798 | None:intergenic | 50.0% | |
| CTGGTACTCTGGATGGATCA+TGG | + | chr7_3:33221793-33221812 | None:intergenic | 50.0% | |
| ! | ATGTGTGCTGGTACTCTGGA+TGG | + | chr7_3:33221800-33221819 | None:intergenic | 50.0% |
| ! | CAAGATGTGTGCTGGTACTC+TGG | + | chr7_3:33221804-33221823 | None:intergenic | 50.0% |
| !! | GAAAAGGTGTCACGTCTCGT+CGG | - | chr7_3:33221823-33221842 | Msa1101920:intron | 50.0% |
| !! | CAGAGGCTTGTTGGATTCGA+TGG | + | chr7_3:33221883-33221902 | None:intergenic | 50.0% |
| TGAGCACTTCAGAGGCTTGT+TGG | + | chr7_3:33221892-33221911 | None:intergenic | 50.0% | |
| ! | GCATCAGCAAACCCCCTTTT+AGG | - | chr7_3:33221912-33221931 | Msa1101920:intron | 50.0% |
| GGTTTCCATCTACCCACGAA+CGG | - | chr7_3:33221933-33221952 | Msa1101920:intron | 50.0% | |
| GTTTCCATCTACCCACGAAC+GGG | - | chr7_3:33221934-33221953 | Msa1101920:intron | 50.0% | |
| ATAACCCGTTCGTGGGTAGA+TGG | + | chr7_3:33221941-33221960 | None:intergenic | 50.0% | |
| GAACGACATAACCCGTTCGT+GGG | + | chr7_3:33221948-33221967 | None:intergenic | 50.0% | |
| TTCTGGTGGAGGAAGCGATT+GGG | + | chr7_3:33222067-33222086 | None:intergenic | 50.0% | |
| ! | TTTCTGGTGGAGGAAGCGAT+TGG | + | chr7_3:33222068-33222087 | None:intergenic | 50.0% |
| AGCCACATCATCCACTGTGA+TGG | - | chr7_3:33222181-33222200 | Msa1101920:intron | 50.0% | |
| GACCATCACAGTGGATGATG+TGG | + | chr7_3:33222186-33222205 | None:intergenic | 50.0% | |
| CAACTTCCATCTGCCTGTTG+GGG | + | chr7_3:33222213-33222232 | None:intergenic | 50.0% | |
| GCAACTTCCATCTGCCTGTT+GGG | + | chr7_3:33222214-33222233 | None:intergenic | 50.0% | |
| AGCAACTTCCATCTGCCTGT+TGG | + | chr7_3:33222215-33222234 | None:intergenic | 50.0% | |
| AACAGGCAGATGGAAGTTGC+TGG | - | chr7_3:33222214-33222233 | Msa1101920:intron | 50.0% | |
| TCATACCCAGTCAGAAGGAG+GGG | - | chr7_3:33222290-33222309 | Msa1101920:intron | 50.0% | |
| CTAAAACCGGATGCATCCAC+CGG | - | chr7_3:33222314-33222333 | Msa1101920:intron | 50.0% | |
| TAAAACCGGATGCATCCACC+GGG | - | chr7_3:33222315-33222334 | Msa1101920:intron | 50.0% | |
| !! | TAACCGTTGGTTCTGGAACC+CGG | + | chr7_3:33222336-33222355 | None:intergenic | 50.0% |
| AACGGAGGGACAAAGCAGAA+AGG | - | chr7_3:33222368-33222387 | Msa1101920:intron | 50.0% | |
| CCTGTTATGGAAGACGAGGA+TGG | + | chr7_3:33222802-33222821 | None:intergenic | 50.0% | |
| CCATCCTCGTCTTCCATAAC+AGG | - | chr7_3:33222799-33222818 | Msa1101920:intron | 50.0% | |
| TTTGCATGTTGCTGCTGAGG+AGG | - | chr7_3:33222823-33222842 | Msa1101920:intron | 50.0% | |
| ! | GAGGGGTATGAGTATCACCT+AGG | + | chr7_3:33222937-33222956 | None:intergenic | 50.0% |
| CGGGTTATCAGTATCAGGAG+GGG | + | chr7_3:33222954-33222973 | None:intergenic | 50.0% | |
| CCGGGTTATCAGTATCAGGA+GGG | + | chr7_3:33222955-33222974 | None:intergenic | 50.0% | |
| CCCTCCTGATACTGATAACC+CGG | - | chr7_3:33222952-33222971 | Msa1101920:intron | 50.0% | |
| TCAGCCGGGTTATCAGTATC+AGG | + | chr7_3:33222959-33222978 | None:intergenic | 50.0% | |
| TGCTAATCATGCCGGTACTG+TGG | - | chr7_3:33223015-33223034 | Msa1101920:intron | 50.0% | |
| TAATCATGCCGGTACTGTGG+CGG | - | chr7_3:33223018-33223037 | Msa1101920:intron | 50.0% | |
| GATACTGTTGATGCTGCAGG+GGG | + | chr7_3:33223081-33223100 | None:intergenic | 50.0% | |
| ! | GGACTGACAGATTTAGGGCA+GGG | + | chr7_3:33223203-33223222 | None:intergenic | 50.0% |
| ! | AGGACTGACAGATTTAGGGC+AGG | + | chr7_3:33223204-33223223 | None:intergenic | 50.0% |
| !! | GTGTATGGTGCTGTTGGTGT+TGG | - | chr7_3:33223314-33223333 | Msa1101920:intron | 50.0% |
| !! | TGGTGCTGTTGGTGTTGGAA+TGG | - | chr7_3:33223319-33223338 | Msa1101920:intron | 50.0% |
| ! | TTGATCGGCTTAACAGGTGC+AGG | - | chr7_3:33223342-33223361 | Msa1101920:intron | 50.0% |
| CAATGTAAGGTGACGTGGGT+GGG | - | chr7_3:33223435-33223454 | Msa1101920:intron | 50.0% | |
| AATGTAAGGTGACGTGGGTG+GGG | - | chr7_3:33223436-33223455 | Msa1101920:intron | 50.0% | |
| ! | GGGGAAGGTAAAGCGGTTTT+GGG | + | chr7_3:33223620-33223639 | None:intergenic | 50.0% |
| ! | AGGGGAAGGTAAAGCGGTTT+TGG | + | chr7_3:33223621-33223640 | None:intergenic | 50.0% |
| GGCCCAATCCAACTAAGCTC+GGG | - | chr7_3:33220709-33220728 | Msa1101920:CDS | 55.0% | |
| GGACCCGAGCTTAGTTGGAT+TGG | + | chr7_3:33220715-33220734 | None:intergenic | 55.0% | |
| GTGCACGAACCAGAACAGAC+AGG | - | chr7_3:33220998-33221017 | Msa1101920:intron | 55.0% | |
| AGACACTACTGCTCCTCCTG+TGG | - | chr7_3:33221264-33221283 | Msa1101920:intron | 55.0% | |
| TAGCGTGTTTGAGCAGCAGC+CGG | + | chr7_3:33221313-33221332 | None:intergenic | 55.0% | |
| TGCGATGCAGATTCCAGAGG+TGG | + | chr7_3:33221385-33221404 | None:intergenic | 55.0% | |
| GCATGCGATGCAGATTCCAG+AGG | + | chr7_3:33221388-33221407 | None:intergenic | 55.0% | |
| CAGGTCATTACCAGCATGCG+AGG | + | chr7_3:33221420-33221439 | None:intergenic | 55.0% | |
| CATACCGAGACCTGTCTACC+AGG | + | chr7_3:33221490-33221509 | None:intergenic | 55.0% | |
| !! | ACATTGTCAGGCTCTGGAGC+AGG | - | chr7_3:33221510-33221529 | Msa1101920:intron | 55.0% |
| !! | CATTGTCAGGCTCTGGAGCA+GGG | - | chr7_3:33221511-33221530 | Msa1101920:intron | 55.0% |
| CAGGGTTGACGAAGAGAGGA+TGG | - | chr7_3:33221529-33221548 | Msa1101920:intron | 55.0% | |
| TGCTTCCAAGGCTCGTCGTA+AGG | - | chr7_3:33221588-33221607 | Msa1101920:intron | 55.0% | |
| GCTTCCAAGGCTCGTCGTAA+GGG | - | chr7_3:33221589-33221608 | Msa1101920:intron | 55.0% | |
| GTCGTTTCCCAGCAGATGAG+GGG | + | chr7_3:33221624-33221643 | None:intergenic | 55.0% | |
| GGTTCCCCGACCTTCTACTA+CGG | + | chr7_3:33221703-33221722 | None:intergenic | 55.0% | |
| !! | AAGGATGGTGGGTCACTTGC+CGG | + | chr7_3:33221760-33221779 | None:intergenic | 55.0% |
| GGCCGACAAACAAAGGATGG+TGG | + | chr7_3:33221772-33221791 | None:intergenic | 55.0% | |
| GCTGATGCTGAGCACTTCAG+AGG | + | chr7_3:33221900-33221919 | None:intergenic | 55.0% | |
| CGAACGACATAACCCGTTCG+TGG | + | chr7_3:33221949-33221968 | None:intergenic | 55.0% | |
| TCCTCCTGAATGAGCCATCC+AGG | - | chr7_3:33222137-33222156 | Msa1101920:intron | 55.0% | |
| CCTCCTGAATGAGCCATCCA+GGG | - | chr7_3:33222138-33222157 | Msa1101920:intron | 55.0% | |
| CTGAATGAGCCATCCAGGGA+CGG | - | chr7_3:33222142-33222161 | Msa1101920:intron | 55.0% | |
| TGAATGAGCCATCCAGGGAC+GGG | - | chr7_3:33222143-33222162 | Msa1101920:intron | 55.0% | |
| TGGGGAGATGACCATCACAG+TGG | + | chr7_3:33222195-33222214 | None:intergenic | 55.0% | |
| GTGATGGTCATCTCCCCAAC+AGG | - | chr7_3:33222197-33222216 | Msa1101920:intron | 55.0% | |
| TCATCTCCCCAACAGGCAGA+TGG | - | chr7_3:33222204-33222223 | Msa1101920:intron | 55.0% | |
| GGTCTCCTGATGCCATCTCT+CGG | - | chr7_3:33222235-33222254 | Msa1101920:intron | 55.0% | |
| TATGGCCGAGAGATGGCATC+AGG | + | chr7_3:33222243-33222262 | None:intergenic | 55.0% | |
| TTAGGCCCCTCCTTCTGACT+GGG | + | chr7_3:33222298-33222317 | None:intergenic | 55.0% | |
| TTTAGGCCCCTCCTTCTGAC+TGG | + | chr7_3:33222299-33222318 | None:intergenic | 55.0% | |
| CAGAAGGAGGGGCCTAAAAC+CGG | - | chr7_3:33222301-33222320 | Msa1101920:intron | 55.0% | |
| ! | CGGTGGATGCATCCGGTTTT+AGG | + | chr7_3:33222316-33222335 | None:intergenic | 55.0% |
| AAGTTGACTGGCGTCTCGCA+CGG | + | chr7_3:33222406-33222425 | None:intergenic | 55.0% | |
| ACGAGGATGGGAGCTTTCCA+GGG | + | chr7_3:33222789-33222808 | None:intergenic | 55.0% | |
| GGCTTTGCATGTTGCTGCTG+AGG | - | chr7_3:33222820-33222839 | Msa1101920:intron | 55.0% | |
| TGAGGACCCTCGACATACTG+TGG | - | chr7_3:33222862-33222881 | Msa1101920:intron | 55.0% | |
| CCTCAGCCACAGTATGTCGA+GGG | + | chr7_3:33222871-33222890 | None:intergenic | 55.0% | |
| TCCTCAGCCACAGTATGTCG+AGG | + | chr7_3:33222872-33222891 | None:intergenic | 55.0% | |
| TCGACATACTGTGGCTGAGG+AGG | - | chr7_3:33222871-33222890 | Msa1101920:intron | 55.0% | |
| GCCGGGTTATCAGTATCAGG+AGG | + | chr7_3:33222956-33222975 | None:intergenic | 55.0% | |
| GAGCAGCCTGAATTTCAGCC+GGG | + | chr7_3:33222973-33222992 | None:intergenic | 55.0% | |
| GGAGCAGCCTGAATTTCAGC+CGG | + | chr7_3:33222974-33222993 | None:intergenic | 55.0% | |
| AATCATGCCGGTACTGTGGC+GGG | - | chr7_3:33223019-33223038 | Msa1101920:intron | 55.0% | |
| !! | ACTGTGGCGGGTCCACAATA+TGG | - | chr7_3:33223031-33223050 | Msa1101920:intron | 55.0% |
| !! | CTGTGGCGGGTCCACAATAT+GGG | - | chr7_3:33223032-33223051 | Msa1101920:intron | 55.0% |
| ! | GCAGGGAGGCATGTTCCTAA+TGG | + | chr7_3:33223186-33223205 | None:intergenic | 55.0% |
| ! | CTGACAGATTTAGGGCAGGG+AGG | + | chr7_3:33223200-33223219 | None:intergenic | 55.0% |
| CCACCCACGTCACCTTACAT+TGG | + | chr7_3:33223437-33223456 | None:intergenic | 55.0% | |
| CCAATGTAAGGTGACGTGGG+TGG | - | chr7_3:33223434-33223453 | Msa1101920:intron | 55.0% | |
| TACCAGCATGCGAGGCAGAG+TGG | + | chr7_3:33221412-33221431 | None:intergenic | 60.0% | |
| GGAGCAGGGTTGACGAAGAG+AGG | - | chr7_3:33221525-33221544 | Msa1101920:intron | 60.0% | |
| AGGTCCCTTACGACGAGCCT+TGG | + | chr7_3:33221596-33221615 | None:intergenic | 60.0% | |
| AAGGCTCGTCGTAAGGGACC+TGG | - | chr7_3:33221595-33221614 | Msa1101920:intron | 60.0% | |
| CTGGTGACCCCTCATCTGCT+GGG | - | chr7_3:33221614-33221633 | Msa1101920:intron | 60.0% | |
| AAGGCAGCAGCCACATCTGC+TGG | - | chr7_3:33221663-33221682 | Msa1101920:intron | 60.0% | |
| AGGCAGCAGCCACATCTGCT+GGG | - | chr7_3:33221664-33221683 | Msa1101920:intron | 60.0% | |
| GCCACATCTGCTGGGGCAAA+AGG | - | chr7_3:33221672-33221691 | Msa1101920:intron | 60.0% | |
| ! | GCCTTTTGCCCCAGCAGATG+TGG | + | chr7_3:33221676-33221695 | None:intergenic | 60.0% |
| TACTGCCTCAGAACCCGCTC+CGG | - | chr7_3:33221738-33221757 | Msa1101920:intron | 60.0% | |
| CCCTGGATGGCTCATTCAGG+AGG | + | chr7_3:33222141-33222160 | None:intergenic | 60.0% | |
| CGTCCCTGGATGGCTCATTC+AGG | + | chr7_3:33222144-33222163 | None:intergenic | 60.0% | |
| TAGGCATACCCGTCCCTGGA+TGG | + | chr7_3:33222154-33222173 | None:intergenic | 60.0% | |
| CTTCTAGGCATACCCGTCCC+TGG | + | chr7_3:33222158-33222177 | None:intergenic | 60.0% | |
| TGGAACCCGGTGGATGCATC+CGG | + | chr7_3:33222323-33222342 | None:intergenic | 60.0% | |
| CCACCGGGTTCCAGAACCAA+CGG | - | chr7_3:33222330-33222349 | Msa1101920:intron | 60.0% | |
| CTGCTTTGTCCCTCCGTTGC+AGG | + | chr7_3:33222366-33222385 | None:intergenic | 60.0% | |
| AGTTGACTGGCGTCTCGCAC+GGG | + | chr7_3:33222405-33222424 | None:intergenic | 60.0% | |
| GACATCTCATAAGGCCCCCC+TGG | - | chr7_3:33222769-33222788 | Msa1101920:intron | 60.0% | |
| AGGATGGGAGCTTTCCAGGG+GGG | + | chr7_3:33222786-33222805 | None:intergenic | 60.0% | |
| GAGGATGGGAGCTTTCCAGG+GGG | + | chr7_3:33222787-33222806 | None:intergenic | 60.0% | |
| CGAGGATGGGAGCTTTCCAG+GGG | + | chr7_3:33222788-33222807 | None:intergenic | 60.0% | |
| GACGAGGATGGGAGCTTTCC+AGG | + | chr7_3:33222790-33222809 | None:intergenic | 60.0% | |
| GGCTCGACATGATGCTGCTG+AGG | - | chr7_3:33222844-33222863 | Msa1101920:intron | 60.0% | |
| CCCTCGACATACTGTGGCTG+AGG | - | chr7_3:33222868-33222887 | Msa1101920:intron | 60.0% | |
| TGTGGCTGAGGAGGTTGCTC+AGG | - | chr7_3:33222880-33222899 | Msa1101920:intron | 60.0% | |
| TTGTGGACCCGCCACAGTAC+CGG | + | chr7_3:33223029-33223048 | None:intergenic | 60.0% | |
| GGGGGATCGACGTCACAGAT+AGG | + | chr7_3:33223063-33223082 | None:intergenic | 60.0% | |
| GGGTCGGACCCGAGCTTAGT+TGG | + | chr7_3:33220720-33220739 | None:intergenic | 65.0% | |
| CTGCTCCTCCTGTGGACTCC+TGG | - | chr7_3:33221272-33221291 | Msa1101920:intron | 65.0% | |
| GAGGTCCAGGAGTCCACAGG+AGG | + | chr7_3:33221280-33221299 | None:intergenic | 65.0% | |
| GAGGAGGTCCAGGAGTCCAC+AGG | + | chr7_3:33221283-33221302 | None:intergenic | 65.0% | |
| GGACTCCTGGACCTCCTCCT+CGG | - | chr7_3:33221285-33221304 | Msa1101920:intron | 65.0% | |
| CTGGACCTCCTCCTCGGAAC+CGG | - | chr7_3:33221291-33221310 | Msa1101920:intron | 65.0% | |
| ! | TTGAGCAGCAGCCGGTTCCG+AGG | + | chr7_3:33221305-33221324 | None:intergenic | 65.0% |
| CTCCACTCTGCCTCGCATGC+TGG | - | chr7_3:33221407-33221426 | Msa1101920:intron | 65.0% | |
| CCAGCAGATGAGGGGTCACC+AGG | + | chr7_3:33221616-33221635 | None:intergenic | 65.0% | |
| CCTGGTGACCCCTCATCTGC+TGG | - | chr7_3:33221613-33221632 | Msa1101920:intron | 65.0% | |
| GGCAGCAGCCACATCTGCTG+GGG | - | chr7_3:33221665-33221684 | Msa1101920:intron | 65.0% | |
| ! | ACTTGCCGGAGCGGGTTCTG+AGG | + | chr7_3:33221746-33221765 | None:intergenic | 65.0% |
| ! | TGGTGGGTCACTTGCCGGAG+CGG | + | chr7_3:33221755-33221774 | None:intergenic | 65.0% |
| ! | TCGGTGCTCGTACGACCTCC+AGG | - | chr7_3:33221842-33221861 | Msa1101920:intron | 65.0% |
| !! | CCGTTGGTTCTGGAACCCGG+TGG | + | chr7_3:33222333-33222352 | None:intergenic | 65.0% |
| TCGAGGTCGAGGGAGAGTGG+GGG | + | chr7_3:33223115-33223134 | None:intergenic | 65.0% | |
| GTCGAGGTCGAGGGAGAGTG+GGG | + | chr7_3:33223116-33223135 | None:intergenic | 65.0% | |
| GGTCGAGGTCGAGGGAGAGT+GGG | + | chr7_3:33223117-33223136 | None:intergenic | 65.0% | |
| AGGTCGAGGTCGAGGGAGAG+TGG | + | chr7_3:33223118-33223137 | None:intergenic | 65.0% | |
| CTCTCCCTCGACCTCGACCT+CGG | - | chr7_3:33223118-33223137 | Msa1101920:intron | 65.0% | |
| GATGCACTACGCCCTCCTCC+TGG | + | chr7_3:33223144-33223163 | None:intergenic | 65.0% | |
| CGGTTCCGAGGAGGAGGTCC+AGG | + | chr7_3:33221293-33221312 | None:intergenic | 70.0% | |
| ! | AGCAGCCGGTTCCGAGGAGG+AGG | + | chr7_3:33221299-33221318 | None:intergenic | 70.0% |
| ! | AGCAGCAGCCGGTTCCGAGG+AGG | + | chr7_3:33221302-33221321 | None:intergenic | 70.0% |
| GGTGGGTCACTTGCCGGAGC+GGG | + | chr7_3:33221754-33221773 | None:intergenic | 70.0% | |
| TGACTGGCGTCTCGCACGGG+AGG | + | chr7_3:33222402-33222421 | None:intergenic | 70.0% | |
| CGAGGTCGAGGGAGAGTGGG+GGG | + | chr7_3:33223114-33223133 | None:intergenic | 70.0% | |
| CTGGCCGAGGTCGAGGTCGA+GGG | + | chr7_3:33223125-33223144 | None:intergenic | 70.0% | |
| CTCGACCTCGGCCAGGAGGA+GGG | - | chr7_3:33223130-33223149 | Msa1101920:intron | 70.0% | |
| CCTGGCCGAGGTCGAGGTCG+AGG | + | chr7_3:33223126-33223145 | None:intergenic | 75.0% | |
| CCTCGACCTCGACCTCGGCC+AGG | - | chr7_3:33223123-33223142 | Msa1101920:intron | 75.0% | |
| CGACCTCGACCTCGGCCAGG+AGG | - | chr7_3:33223126-33223145 | Msa1101920:intron | 75.0% | |
| CCTCCTCCTGGCCGAGGTCG+AGG | + | chr7_3:33223132-33223151 | None:intergenic | 75.0% | |
| CCTCGACCTCGGCCAGGAGG+AGG | - | chr7_3:33223129-33223148 | Msa1101920:intron | 75.0% | |
| CTACGCCCTCCTCCTGGCCG+AGG | + | chr7_3:33223138-33223157 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 33220550 | 33224823 | 33220550 | ID=Msa1101920;Name=Msa1101920 |
| chr7_3 | mRNA | 33220550 | 33224823 | 33220550 | ID=Msa1101920-mRNA-1;Parent=Msa1101920;Name=Msa1101920-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|0.66|0|0.33|3|0|206 |
| chr7_3 | exon | 33224819 | 33224823 | 33224819 | ID=Msa1101920-mRNA-1:exon:7164;Parent=Msa1101920-mRNA-1 |
| chr7_3 | exon | 33221075 | 33221232 | 33221075 | ID=Msa1101920-mRNA-1:exon:7163;Parent=Msa1101920-mRNA-1 |
| chr7_3 | exon | 33220550 | 33221007 | 33220550 | ID=Msa1101920-mRNA-1:exon:7162;Parent=Msa1101920-mRNA-1 |
| chr7_3 | CDS | 33224819 | 33224823 | 33224819 | ID=Msa1101920-mRNA-1:cds;Parent=Msa1101920-mRNA-1 |
| chr7_3 | CDS | 33221075 | 33221232 | 33221075 | ID=Msa1101920-mRNA-1:cds;Parent=Msa1101920-mRNA-1 |
| chr7_3 | CDS | 33220550 | 33221007 | 33220550 | ID=Msa1101920-mRNA-1:cds;Parent=Msa1101920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
