Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101910 | XP_027188904.1 | 60.000 | 230 | 72 | 8 | 5 | 220 | 65 | 288 | 1.20e-70 | 228 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101910 | A0A3Q7X5E5 | 60.000 | 230 | 72 | 8 | 5 | 220 | 65 | 288 | 5.73e-71 | 228 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1101910 | 0.803259 | 3.796789e-49 | -8.615850e-47 |
| Msa1101910 | Msa1101920 | 0.827412 | 1.586902e-54 | -8.615850e-47 |
| Msa1101910 | Msa1102110 | 0.816052 | 6.745143e-52 | -8.615850e-47 |
| Msa0244640 | Msa1101910 | 0.800220 | 1.596440e-48 | -8.615850e-47 |
| Msa0300680 | Msa1101910 | 0.806434 | 8.239892e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101910 | MtrunA17_Chr7g0231021 | 56.957 | 230 | 84 | 6 | 6 | 224 | 10 | 235 | 4.38e-72 | 220 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 45 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAAAGAAGTTGAAAATTT+TGG | 0.047332 | 7_3:+33215288 | None:intergenic |
| TATTGGTGTAGGTGCTAAAT+TGG | 0.248451 | 7_3:-33214922 | Msa1101910:three_prime_UTR |
| TTGATATTTAAATTATTTCA+TGG | 0.301704 | 7_3:-33214669 | Msa1101910:three_prime_UTR |
| TGGATATGCTCTTTATATCT+TGG | 0.305673 | 7_3:+33215637 | None:intergenic |
| TGCTAACTAGGGATGAAATT+AGG | 0.307722 | 7_3:-33215506 | Msa1101910:CDS |
| AAGATAGAGTCTTCATATTC+AGG | 0.312946 | 7_3:+33215363 | None:intergenic |
| CCAGTGTATATTTGCTAACT+AGG | 0.329206 | 7_3:-33215518 | Msa1101910:CDS |
| ATTGGTGTAGGTGCTAAATT+GGG | 0.350862 | 7_3:-33214921 | Msa1101910:three_prime_UTR |
| GATCTAGCAAATTCTAATAA+TGG | 0.350921 | 7_3:-33215264 | Msa1101910:CDS |
| TCAGAATCATTAACAAGAAC+TGG | 0.378002 | 7_3:+33215693 | None:intergenic |
| TGTGTGACATGAAGTTTAAT+TGG | 0.394338 | 7_3:-33215314 | Msa1101910:CDS |
| AGGTCTGTTGTTAGTAGTCT+TGG | 0.395810 | 7_3:-33214809 | Msa1101910:three_prime_UTR |
| TGATTCTGATGTTGTTAGAA+AGG | 0.424151 | 7_3:-33215679 | Msa1101910:CDS |
| CTTGTACTTAACTGTTAAAC+CGG | 0.439589 | 7_3:+33215206 | None:intergenic |
| ATCAGGTTCATCACTTCTAA+TGG | 0.446507 | 7_3:-33215721 | Msa1101910:CDS |
| TTTGTGTTTAGCTCTAATAC+AGG | 0.448926 | 7_3:+33215129 | None:intergenic |
| TGAATATGAAGACTCTATCT+TGG | 0.453759 | 7_3:-33215361 | Msa1101910:CDS |
| AGCAAATTCTAATAATGGCT+TGG | 0.459635 | 7_3:-33215259 | Msa1101910:CDS |
| TAGCTGCCTTCTGTTGTTTG+CGG | 0.481435 | 7_3:-33214866 | Msa1101910:three_prime_UTR |
| CTGTTTAGTGTGGTTTGAAG+AGG | 0.485545 | 7_3:-33214829 | Msa1101910:three_prime_UTR |
| AAAGCTTCAACTTGTGAAGA+TGG | 0.495233 | 7_3:-33215043 | Msa1101910:CDS |
| TCTGTTGTTAGTAGTCTTGG+TGG | 0.495978 | 7_3:-33214806 | Msa1101910:three_prime_UTR |
| AGATAGAGTCTTCATATTCA+GGG | 0.508885 | 7_3:+33215364 | None:intergenic |
| TAATCAGAGTTCAGTACAAT+CGG | 0.518306 | 7_3:-33215076 | Msa1101910:CDS |
| CACAGCTGACACAGAACTCT+CGG | 0.524832 | 7_3:+33215005 | None:intergenic |
| CTATATGCTTCTGTTTAGTG+TGG | 0.525489 | 7_3:-33214839 | Msa1101910:three_prime_UTR |
| CAGTGTATATTTGCTAACTA+GGG | 0.525566 | 7_3:-33215517 | Msa1101910:CDS |
| TCTCGATTCAACTTCATGAA+AGG | 0.532761 | 7_3:-33215585 | Msa1101910:CDS |
| AAATTCTAATAATGGCTTGG+TGG | 0.533397 | 7_3:-33215256 | Msa1101910:CDS |
| AATAGCATGTACAAAAGTAA+TGG | 0.537660 | 7_3:-33214624 | Msa1101910:three_prime_UTR |
| AGTATACCCGTGCTAACGCA+CGG | 0.541778 | 7_3:-33214705 | Msa1101910:three_prime_UTR |
| CTCTCAAACTTATTGACACA+GGG | 0.544383 | 7_3:+33215397 | None:intergenic |
| CTGAACCCGTGCGTTAGCAC+GGG | 0.550280 | 7_3:+33214699 | None:intergenic |
| ACTGAACCCGTGCGTTAGCA+CGG | 0.552448 | 7_3:+33214698 | None:intergenic |
| TGTGAAGATGGAAAAGGTGA+TGG | 0.556478 | 7_3:-33215031 | Msa1101910:CDS |
| TCAACTTGTGAAGATGGAAA+AGG | 0.558493 | 7_3:-33215037 | Msa1101910:CDS |
| CGAGAGTTCTGTGTCAGCTG+TGG | 0.574851 | 7_3:-33215004 | Msa1101910:CDS |
| CCTAGTTAGCAAATATACAC+TGG | 0.586336 | 7_3:+33215518 | None:intergenic |
| AGTCTTGGTGGCATGTGTTG+TGG | 0.588652 | 7_3:-33214794 | Msa1101910:three_prime_UTR |
| TTGCTTATAAATGTGACTTG+TGG | 0.588984 | 7_3:+33215617 | None:intergenic |
| TCTCTCAAACTTATTGACAC+AGG | 0.599143 | 7_3:+33215396 | None:intergenic |
| AGTACTCCGCAAACAACAGA+AGG | 0.607353 | 7_3:+33214860 | None:intergenic |
| GTATACCCGTGCTAACGCAC+GGG | 0.620413 | 7_3:-33214704 | Msa1101910:three_prime_UTR |
| TTGGTGTAGGTGCTAAATTG+GGG | 0.626195 | 7_3:-33214920 | Msa1101910:three_prime_UTR |
| TCAGAGTTCAGTACAATCGG+TGG | 0.645978 | 7_3:-33215073 | Msa1101910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAAATTTATTGCTT+TGG | + | chr7_3:33217354-33217373 | None:intergenic | 10.0% |
| !!! | AAATATAATTTTTTACATGT+TGG | - | chr7_3:33218597-33218616 | Msa1101910:intron | 10.0% |
| !!! | AATATAATTTTTTACATGTT+GGG | - | chr7_3:33218598-33218617 | Msa1101910:intron | 10.0% |
| !! | TTGATATTTAAATTATTTCA+TGG | - | chr7_3:33219399-33219418 | Msa1101910:intron | 10.0% |
| !!! | TTTTTTATTTTAATTGCAAG+CGG | + | chr7_3:33216431-33216450 | None:intergenic | 15.0% |
| !! | AAAAAAATTGGATGATATAT+TGG | + | chr7_3:33217436-33217455 | None:intergenic | 15.0% |
| !! | CATCAAATTAATGATTTATA+TGG | - | chr7_3:33217998-33218017 | Msa1101910:intron | 15.0% |
| !!! | AATTTGCTTATAAAAAGTAA+CGG | - | chr7_3:33218071-33218090 | Msa1101910:intron | 15.0% |
| !! | TAGAAAGAAAAAAAAATACT+TGG | + | chr7_3:33218244-33218263 | None:intergenic | 15.0% |
| !!! | AGCAATTGTTTTAAAAACAT+AGG | + | chr7_3:33217239-33217258 | None:intergenic | 20.0% |
| !! | GGACAAAAATAAAATCAAAT+GGG | + | chr7_3:33217684-33217703 | None:intergenic | 20.0% |
| !! | ATGTATCTAGTAATTTGAAA+AGG | + | chr7_3:33217720-33217739 | None:intergenic | 20.0% |
| !! | AAGTTAGTAGTATTAATTAG+GGG | + | chr7_3:33217766-33217785 | None:intergenic | 20.0% |
| !! | CAAGTTAGTAGTATTAATTA+GGG | + | chr7_3:33217767-33217786 | None:intergenic | 20.0% |
| !! | ACAAGTTAGTAGTATTAATT+AGG | + | chr7_3:33217768-33217787 | None:intergenic | 20.0% |
| !! | TTTAATACACATACAAACAA+AGG | - | chr7_3:33217809-33217828 | Msa1101910:intron | 20.0% |
| !! | AAAATGTGATATTATTGCTT+GGG | + | chr7_3:33218114-33218133 | None:intergenic | 20.0% |
| !!! | ACTTTAGAAAGAAAATAAGT+TGG | + | chr7_3:33218190-33218209 | None:intergenic | 20.0% |
| !!! | GATTTTCAAATAGATAATCA+GGG | + | chr7_3:33218920-33218939 | None:intergenic | 20.0% |
| !!! | ATTTATTTTTAGTGTCTTGT+TGG | - | chr7_3:33219179-33219198 | Msa1101910:intron | 20.0% |
| !!! | GTACATTGTAATTCTTTTTA+TGG | - | chr7_3:33219308-33219327 | Msa1101910:intron | 20.0% |
| !!! | ATTGTCTGCTTTTTATACTT+GGG | + | chr7_3:33214737-33214756 | None:intergenic | 25.0% |
| !!! | TATTGTCTGCTTTTTATACT+TGG | + | chr7_3:33214738-33214757 | None:intergenic | 25.0% |
| ! | GTAAAAAGGGAATTTACTTT+GGG | + | chr7_3:33214802-33214821 | None:intergenic | 25.0% |
| !! | GTTCTCTAAATTATGAGTTT+TGG | + | chr7_3:33215100-33215119 | None:intergenic | 25.0% |
| ! | TATAGTACAACCAAAATGTT+AGG | - | chr7_3:33215204-33215223 | Msa1101910:CDS | 25.0% |
| !! | GTAGTATTTTCCTAACATTT+TGG | + | chr7_3:33215217-33215236 | None:intergenic | 25.0% |
| !!! | TGTCTTATTTTATGACTTGT+TGG | + | chr7_3:33215246-33215265 | None:intergenic | 25.0% |
| ! | TAATCATCATATTTCTTCCT+CGG | - | chr7_3:33215966-33215985 | Msa1101910:intron | 25.0% |
| ! | CAAAAATAAAATCAAATGGG+TGG | + | chr7_3:33217681-33217700 | None:intergenic | 25.0% |
| ! | GGGACAAAAATAAAATCAAA+TGG | + | chr7_3:33217685-33217704 | None:intergenic | 25.0% |
| ! | TATCTAGTAATTTGAAAAGG+AGG | + | chr7_3:33217717-33217736 | None:intergenic | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | + | chr7_3:33217756-33217775 | None:intergenic | 25.0% |
| ! | AAGAAATGTGAAAAATGCAA+AGG | - | chr7_3:33217891-33217910 | Msa1101910:intron | 25.0% |
| ! | AGAAATGTGAAAAATGCAAA+GGG | - | chr7_3:33217892-33217911 | Msa1101910:intron | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | + | chr7_3:33218037-33218056 | None:intergenic | 25.0% |
| ! | GAAAATGTGATATTATTGCT+TGG | + | chr7_3:33218115-33218134 | None:intergenic | 25.0% |
| !!! | TAATTTTTTACATGTTGGGT+TGG | - | chr7_3:33218602-33218621 | Msa1101910:intron | 25.0% |
| !! | CCAAAGAAGTTGAAAATTTT+GGG | + | chr7_3:33218782-33218801 | None:intergenic | 25.0% |
| ! | GATCTAGCAAATTCTAATAA+TGG | - | chr7_3:33218804-33218823 | Msa1101910:intron | 25.0% |
| !! | GGATTTTCAAATAGATAATC+AGG | + | chr7_3:33218921-33218940 | None:intergenic | 25.0% |
| ! | CTACTAGTTGCATTAAAAAT+AGG | + | chr7_3:33219345-33219364 | None:intergenic | 25.0% |
| ! | AATAGCATGTACAAAAGTAA+TGG | - | chr7_3:33219444-33219463 | Msa1101910:intron | 25.0% |
| GCATTGTGAAATGAATATGT+TGG | - | chr7_3:33214571-33214590 | Msa1101910:three_prime_UTR | 30.0% | |
| GGTAAAAAGGGAATTTACTT+TGG | + | chr7_3:33214803-33214822 | None:intergenic | 30.0% | |
| ! | AAATTCCCTTTTTACCCTTA+CGG | - | chr7_3:33214807-33214826 | Msa1101910:three_prime_UTR | 30.0% |
| !!! | GTTTTGGTTGAATGAATGAA+TGG | + | chr7_3:33215084-33215103 | None:intergenic | 30.0% |
| GTACTATATTTACATTTGCG+CGG | + | chr7_3:33215192-33215211 | None:intergenic | 30.0% | |
| ! | TCAACTCTTCTTTAGCATTT+TGG | + | chr7_3:33215352-33215371 | None:intergenic | 30.0% |
| ACTTGATATTGTTGATGTTG+CGG | + | chr7_3:33217050-33217069 | None:intergenic | 30.0% | |
| ATGTTCCTAATGGTAGTTTA+TGG | + | chr7_3:33217141-33217160 | None:intergenic | 30.0% | |
| TCTTATTGTAAGTGTGTGTA+TGG | - | chr7_3:33217263-33217282 | Msa1101910:intron | 30.0% | |
| TGCTTTGGCTAAAAAAACAT+AGG | + | chr7_3:33217339-33217358 | None:intergenic | 30.0% | |
| ATTTCACATTAGCCAATGTA+AGG | - | chr7_3:33217380-33217399 | Msa1101910:intron | 30.0% | |
| !!! | TTCAGTGGTTTTTAAAACAG+GGG | + | chr7_3:33217594-33217613 | None:intergenic | 30.0% |
| !!! | GTTCAGTGGTTTTTAAAACA+GGG | + | chr7_3:33217595-33217614 | None:intergenic | 30.0% |
| !!! | TGTTCAGTGGTTTTTAAAAC+AGG | + | chr7_3:33217596-33217615 | None:intergenic | 30.0% |
| AAAAGGAAAACTTTGTTCAG+TGG | + | chr7_3:33217609-33217628 | None:intergenic | 30.0% | |
| TGAAAAGGAGGTTACATTTA+GGG | + | chr7_3:33217705-33217724 | None:intergenic | 30.0% | |
| TTGAAAAGGAGGTTACATTT+AGG | + | chr7_3:33217706-33217725 | None:intergenic | 30.0% | |
| CATACAAACAAAGGACAATT+TGG | - | chr7_3:33217818-33217837 | Msa1101910:intron | 30.0% | |
| GAAATGTGAAAAATGCAAAG+GGG | - | chr7_3:33217893-33217912 | Msa1101910:intron | 30.0% | |
| AAATGTGAAAAATGCAAAGG+GGG | - | chr7_3:33217894-33217913 | Msa1101910:intron | 30.0% | |
| ATATATGAGTGATGAGAACT+TGG | + | chr7_3:33218158-33218177 | None:intergenic | 30.0% | |
| AATGTAGAGATTAAGCAACA+AGG | + | chr7_3:33218214-33218233 | None:intergenic | 30.0% | |
| ATGTAGAGATTAAGTAGCAA+AGG | + | chr7_3:33218272-33218291 | None:intergenic | 30.0% | |
| TCAGAATCATTAACAAGAAC+TGG | + | chr7_3:33218378-33218397 | None:intergenic | 30.0% | |
| TGATTCTGATGTTGTTAGAA+AGG | - | chr7_3:33218389-33218408 | Msa1101910:intron | 30.0% | |
| TGGATATGCTCTTTATATCT+TGG | + | chr7_3:33218434-33218453 | None:intergenic | 30.0% | |
| TTGCTTATAAATGTGACTTG+TGG | + | chr7_3:33218454-33218473 | None:intergenic | 30.0% | |
| ! | CAGTGTATATTTGCTAACTA+GGG | - | chr7_3:33218551-33218570 | Msa1101910:intron | 30.0% |
| AGATAGAGTCTTCATATTCA+GGG | + | chr7_3:33218707-33218726 | None:intergenic | 30.0% | |
| AAGATAGAGTCTTCATATTC+AGG | + | chr7_3:33218708-33218727 | None:intergenic | 30.0% | |
| TGAATATGAAGACTCTATCT+TGG | - | chr7_3:33218707-33218726 | Msa1101910:intron | 30.0% | |
| TGTGTGACATGAAGTTTAAT+TGG | - | chr7_3:33218754-33218773 | Msa1101910:intron | 30.0% | |
| ! | CCCAAAATTTTCAACTTCTT+TGG | - | chr7_3:33218779-33218798 | Msa1101910:intron | 30.0% |
| ! | GCCAAAGAAGTTGAAAATTT+TGG | + | chr7_3:33218783-33218802 | None:intergenic | 30.0% |
| AGCAAATTCTAATAATGGCT+TGG | - | chr7_3:33218809-33218828 | Msa1101910:intron | 30.0% | |
| ! | AAATTCTAATAATGGCTTGG+TGG | - | chr7_3:33218812-33218831 | Msa1101910:intron | 30.0% |
| ! | GATCAATCAGATTCTTTTAC+CGG | - | chr7_3:33218843-33218862 | Msa1101910:intron | 30.0% |
| CTTGTACTTAACTGTTAAAC+CGG | + | chr7_3:33218865-33218884 | None:intergenic | 30.0% | |
| !! | TTTGTGTTTAGCTCTAATAC+AGG | + | chr7_3:33218942-33218961 | None:intergenic | 30.0% |
| TAATCAGAGTTCAGTACAAT+CGG | - | chr7_3:33218992-33219011 | Msa1101910:intron | 30.0% | |
| !! | ATCGGTTTTTGTTAGCATAT+TGG | - | chr7_3:33219129-33219148 | Msa1101910:intron | 30.0% |
| ! | TTTTGTTAGCATATTGGTGT+AGG | - | chr7_3:33219135-33219154 | Msa1101910:intron | 30.0% |
| ATAAAATAACCTCGTCACTG+AGG | + | chr7_3:33214597-33214616 | None:intergenic | 35.0% | |
| !!! | TATTGTTTTGGACTAGTCCA+TGG | - | chr7_3:33214685-33214704 | Msa1101910:three_prime_UTR | 35.0% |
| !!! | TCTGCTTTTTATACTTGGGT+CGG | + | chr7_3:33214733-33214752 | None:intergenic | 35.0% |
| AATACTGCTCTTTACCCAAT+TGG | - | chr7_3:33214765-33214784 | Msa1101910:three_prime_UTR | 35.0% | |
| ! | AATTCCCTTTTTACCCTTAC+GGG | - | chr7_3:33214808-33214827 | Msa1101910:three_prime_UTR | 35.0% |
| ! | CTCTTCTTTAGCATTTTGGA+AGG | + | chr7_3:33215348-33215367 | None:intergenic | 35.0% |
| GTAATGACCTGCAATGAATT+GGG | - | chr7_3:33215426-33215445 | Msa1101910:CDS | 35.0% | |
| ATTCAGATAGGTACATTAGG+TGG | + | chr7_3:33215566-33215585 | None:intergenic | 35.0% | |
| AGCATTCAGATAGGTACATT+AGG | + | chr7_3:33215569-33215588 | None:intergenic | 35.0% | |
| ATTCAGAGGAAACTCCAAAA+AGG | - | chr7_3:33215641-33215660 | Msa1101910:CDS | 35.0% | |
| AAATGCATAACCGTAGTAGA+AGG | - | chr7_3:33215687-33215706 | Msa1101910:CDS | 35.0% | |
| GGGTAAATGGAAACCTAAAA+GGG | + | chr7_3:33215925-33215944 | None:intergenic | 35.0% | |
| TGGGTAAATGGAAACCTAAA+AGG | + | chr7_3:33215926-33215945 | None:intergenic | 35.0% | |
| ! | TCTGTCTTTTTGTGTTTGCA+GGG | + | chr7_3:33216023-33216042 | None:intergenic | 35.0% |
| ! | ATCTGTCTTTTTGTGTTTGC+AGG | + | chr7_3:33216024-33216043 | None:intergenic | 35.0% |
| CTTTATCCACCAGAAACAAT+AGG | - | chr7_3:33216069-33216088 | Msa1101910:intron | 35.0% | |
| GGTAAAAGTGACATCTCATA+AGG | - | chr7_3:33216757-33216776 | Msa1101910:intron | 35.0% | |
| TTGATATTGTTGATGTTGCG+GGG | + | chr7_3:33217048-33217067 | None:intergenic | 35.0% | |
| CTTGATATTGTTGATGTTGC+GGG | + | chr7_3:33217049-33217068 | None:intergenic | 35.0% | |
| TCCTAATGGTAGTTTATGGA+GGG | + | chr7_3:33217137-33217156 | None:intergenic | 35.0% | |
| TTCCTAATGGTAGTTTATGG+AGG | + | chr7_3:33217138-33217157 | None:intergenic | 35.0% | |
| CAAATGGGTGGTTACATTAA+GGG | + | chr7_3:33217669-33217688 | None:intergenic | 35.0% | |
| TCAAATGGGTGGTTACATTA+AGG | + | chr7_3:33217670-33217689 | None:intergenic | 35.0% | |
| AATGTGAAAAATGCAAAGGG+GGG | - | chr7_3:33217895-33217914 | Msa1101910:intron | 35.0% | |
| GATATTATTGCTTGGGAACA+AGG | + | chr7_3:33218107-33218126 | None:intergenic | 35.0% | |
| ATCAGGTTCATCACTTCTAA+TGG | - | chr7_3:33218347-33218366 | Msa1101910:intron | 35.0% | |
| TCTCGATTCAACTTCATGAA+AGG | - | chr7_3:33218483-33218502 | Msa1101910:intron | 35.0% | |
| CCTAGTTAGCAAATATACAC+TGG | + | chr7_3:33218553-33218572 | None:intergenic | 35.0% | |
| ! | CCAGTGTATATTTGCTAACT+AGG | - | chr7_3:33218550-33218569 | Msa1101910:intron | 35.0% |
| TGCTAACTAGGGATGAAATT+AGG | - | chr7_3:33218562-33218581 | Msa1101910:intron | 35.0% | |
| ! | TTTTCATATCTTGCTCGTCA+AGG | - | chr7_3:33218631-33218650 | Msa1101910:intron | 35.0% |
| CTCTCAAACTTATTGACACA+GGG | + | chr7_3:33218674-33218693 | None:intergenic | 35.0% | |
| TCTCTCAAACTTATTGACAC+AGG | + | chr7_3:33218675-33218694 | None:intergenic | 35.0% | |
| AAAGCTTCAACTTGTGAAGA+TGG | - | chr7_3:33219025-33219044 | Msa1101910:intron | 35.0% | |
| TCAACTTGTGAAGATGGAAA+AGG | - | chr7_3:33219031-33219050 | Msa1101910:intron | 35.0% | |
| TATTGGTGTAGGTGCTAAAT+TGG | - | chr7_3:33219146-33219165 | Msa1101910:intron | 35.0% | |
| ATTGGTGTAGGTGCTAAATT+GGG | - | chr7_3:33219147-33219166 | Msa1101910:intron | 35.0% | |
| CTATATGCTTCTGTTTAGTG+TGG | - | chr7_3:33219229-33219248 | Msa1101910:intron | 35.0% | |
| GGGAATGAGCAAATCCAATT+GGG | + | chr7_3:33214782-33214801 | None:intergenic | 40.0% | |
| TGGGAATGAGCAAATCCAAT+TGG | + | chr7_3:33214783-33214802 | None:intergenic | 40.0% | |
| AAGTCCCGTAAGGGTAAAAA+GGG | + | chr7_3:33214815-33214834 | None:intergenic | 40.0% | |
| TAAGTCCCGTAAGGGTAAAA+AGG | + | chr7_3:33214816-33214835 | None:intergenic | 40.0% | |
| CGAAGGAACGAAGATAAACA+GGG | + | chr7_3:33215040-33215059 | None:intergenic | 40.0% | |
| ACGAAGGAACGAAGATAAAC+AGG | + | chr7_3:33215041-33215060 | None:intergenic | 40.0% | |
| TCCTTCGTTCGTTCATACAT+AGG | - | chr7_3:33215053-33215072 | Msa1101910:CDS | 40.0% | |
| ACCTATGTATGAACGAACGA+AGG | + | chr7_3:33215057-33215076 | None:intergenic | 40.0% | |
| CTGCTCAAACACGCTATAAT+CGG | - | chr7_3:33215314-33215333 | Msa1101910:CDS | 40.0% | |
| !! | AGTTGATTTGCAACCACCTT+TGG | - | chr7_3:33215366-33215385 | Msa1101910:CDS | 40.0% |
| GGTAATGACCTGCAATGAAT+TGG | - | chr7_3:33215425-33215444 | Msa1101910:CDS | 40.0% | |
| TATTCTTGTTGACCAGGAGT+GGG | + | chr7_3:33215463-33215482 | None:intergenic | 40.0% | |
| ATATTCTTGTTGACCAGGAG+TGG | + | chr7_3:33215464-33215483 | None:intergenic | 40.0% | |
| ACAAGAATATCCTGGTAGAC+AGG | - | chr7_3:33215474-33215493 | Msa1101910:CDS | 40.0% | |
| TACCTATCTGAATGCTTCCA+AGG | - | chr7_3:33215573-33215592 | Msa1101910:CDS | 40.0% | |
| GCAGTACAAACATGTTCAGA+GGG | + | chr7_3:33215721-33215740 | None:intergenic | 40.0% | |
| TACCAACACACGTCTTGAAA+AGG | - | chr7_3:33215804-33215823 | Msa1101910:intron | 40.0% | |
| ! | ACATCAGCAAACACCCTTTT+AGG | - | chr7_3:33215909-33215928 | Msa1101910:intron | 40.0% |
| ! | TTCTGGTGGATAAAGCGATT+GGG | + | chr7_3:33216064-33216083 | None:intergenic | 40.0% |
| ! | TTTCTGGTGGATAAAGCGAT+TGG | + | chr7_3:33216065-33216084 | None:intergenic | 40.0% |
| TCACCAGCATATCTACAACA+TGG | - | chr7_3:33216096-33216115 | Msa1101910:intron | 40.0% | |
| TGACCATGTTGTAGATATGC+TGG | + | chr7_3:33216102-33216121 | None:intergenic | 40.0% | |
| !! | GATGATGTGGCTTGTCTTTT+AGG | + | chr7_3:33216170-33216189 | None:intergenic | 40.0% |
| GGTATGATATCATCAACCAC+GGG | + | chr7_3:33216274-33216293 | None:intergenic | 40.0% | |
| GGGTATGATATCATCAACCA+CGG | + | chr7_3:33216275-33216294 | None:intergenic | 40.0% | |
| TGATATCATACCCAGTCAGA+AGG | - | chr7_3:33216282-33216301 | Msa1101910:intron | 40.0% | |
| !! | TAGAAGATAACCGTTGGTTC+TGG | + | chr7_3:33216340-33216359 | None:intergenic | 40.0% |
| AACCAACGGTTATCTTCTAC+CGG | - | chr7_3:33216341-33216360 | Msa1101910:intron | 40.0% | |
| GACACGTGTTTACTGAAGTT+CGG | - | chr7_3:33216736-33216755 | Msa1101910:intron | 40.0% | |
| ATCATGCTCAGTTTCACGAT+GGG | + | chr7_3:33216877-33216896 | None:intergenic | 40.0% | |
| TATCATGCTCAGTTTCACGA+TGG | + | chr7_3:33216878-33216897 | None:intergenic | 40.0% | |
| TGATAACTCGGCTGAAATTC+AGG | - | chr7_3:33216929-33216948 | Msa1101910:intron | 40.0% | |
| TGATTAGCATTATCACGAGC+AGG | + | chr7_3:33216969-33216988 | None:intergenic | 40.0% | |
| ! | CGTGATAATGCTAATCATGC+TGG | - | chr7_3:33216972-33216991 | Msa1101910:intron | 40.0% |
| TGATATTGTTGATGTTGCGG+GGG | + | chr7_3:33217047-33217066 | None:intergenic | 40.0% | |
| TCCCTCCATAAACTACCATT+AGG | - | chr7_3:33217133-33217152 | Msa1101910:intron | 40.0% | |
| TTGTGCAAATATGTCTGAGC+AGG | + | chr7_3:33217194-33217213 | None:intergenic | 40.0% | |
| !! | TTGGTGTTGGAATGGTTGAT+CGG | - | chr7_3:33217291-33217310 | Msa1101910:intron | 40.0% |
| TAAAACAGGGGAAGGTAAAG+CGG | + | chr7_3:33217582-33217601 | None:intergenic | 40.0% | |
| !!! | GTGGTTTTTAAAACAGGGGA+AGG | + | chr7_3:33217590-33217609 | None:intergenic | 40.0% |
| TTCTACGTATGTTGCAGATC+AGG | - | chr7_3:33218330-33218349 | Msa1101910:intron | 40.0% | |
| TGTGAAGATGGAAAAGGTGA+TGG | - | chr7_3:33219037-33219056 | Msa1101910:intron | 40.0% | |
| ! | GCGGATTTTGTTCGTTTTCT+TGG | - | chr7_3:33219099-33219118 | Msa1101910:intron | 40.0% |
| TTGGTGTAGGTGCTAAATTG+GGG | - | chr7_3:33219148-33219167 | Msa1101910:intron | 40.0% | |
| CTGTTTAGTGTGGTTTGAAG+AGG | - | chr7_3:33219239-33219258 | Msa1101910:intron | 40.0% | |
| AGGTCTGTTGTTAGTAGTCT+TGG | - | chr7_3:33219259-33219278 | Msa1101910:intron | 40.0% | |
| ! | TCTGTTGTTAGTAGTCTTGG+TGG | - | chr7_3:33219262-33219281 | Msa1101910:intron | 40.0% |
| GCGTATGTTAAGTCCCGTAA+GGG | + | chr7_3:33214824-33214843 | None:intergenic | 45.0% | |
| AGCGTATGTTAAGTCCCGTA+AGG | + | chr7_3:33214825-33214844 | None:intergenic | 45.0% | |
| ATGACCTGCAATGAATTGGG+AGG | - | chr7_3:33215429-33215448 | Msa1101910:CDS | 45.0% | |
| ACATCCTCCCAATTCATTGC+AGG | + | chr7_3:33215436-33215455 | None:intergenic | 45.0% | |
| CAATGAATTGGGAGGATGTC+TGG | - | chr7_3:33215437-33215456 | Msa1101910:CDS | 45.0% | |
| CCAGGATATTCTTGTTGACC+AGG | + | chr7_3:33215469-33215488 | None:intergenic | 45.0% | |
| CCTGGTCAACAAGAATATCC+TGG | - | chr7_3:33215466-33215485 | Msa1101910:CDS | 45.0% | |
| ATATCCTGGTAGACAGGTCT+TGG | - | chr7_3:33215480-33215499 | Msa1101910:CDS | 45.0% | |
| GGTCTTGGTATGACATTGTC+AGG | - | chr7_3:33215495-33215514 | Msa1101910:CDS | 45.0% | |
| !! | AGCCTTGGAAGCATTCAGAT+AGG | + | chr7_3:33215578-33215597 | None:intergenic | 45.0% |
| !! | TGTTGTTTCCCAGCAGATCA+GGG | + | chr7_3:33215622-33215641 | None:intergenic | 45.0% |
| !! | ATGTTGTTTCCCAGCAGATC+AGG | + | chr7_3:33215623-33215642 | None:intergenic | 45.0% |
| TGCTGGGAAACAACATTCAG+AGG | - | chr7_3:33215627-33215646 | Msa1101910:CDS | 45.0% | |
| GCATAACCGTAGTAGAAGGT+CGG | - | chr7_3:33215691-33215710 | Msa1101910:CDS | 45.0% | |
| CATAACCGTAGTAGAAGGTC+GGG | - | chr7_3:33215692-33215711 | Msa1101910:CDS | 45.0% | |
| ATAACCGTAGTAGAAGGTCG+GGG | - | chr7_3:33215693-33215712 | Msa1101910:CDS | 45.0% | |
| GGCAGTACAAACATGTTCAG+AGG | + | chr7_3:33215722-33215741 | None:intergenic | 45.0% | |
| GCAGACAAACAAAGGATGGT+GGG | + | chr7_3:33215768-33215787 | None:intergenic | 45.0% | |
| CATGGCAGACAAACAAAGGA+TGG | + | chr7_3:33215772-33215791 | None:intergenic | 45.0% | |
| GGATCATGGCAGACAAACAA+AGG | + | chr7_3:33215776-33215795 | None:intergenic | 45.0% | |
| TTGGTACTCTGGATGGATCA+TGG | + | chr7_3:33215790-33215809 | None:intergenic | 45.0% | |
| !! | CACCTTTTCAAGACGTGTGT+TGG | + | chr7_3:33215809-33215828 | None:intergenic | 45.0% |
| !! | GAAAAGGTGTCACATCTCGT+CGG | - | chr7_3:33215820-33215839 | Msa1101910:intron | 45.0% |
| GGTTTCCATTTACCCACGAA+CGG | - | chr7_3:33215930-33215949 | Msa1101910:intron | 45.0% | |
| GTTTCCATTTACCCACGAAC+GGG | - | chr7_3:33215931-33215950 | Msa1101910:intron | 45.0% | |
| ATAACCCGTTCGTGGGTAAA+TGG | + | chr7_3:33215938-33215957 | None:intergenic | 45.0% | |
| !! | GACTCACCTATTGTTTCTGG+TGG | + | chr7_3:33216078-33216097 | None:intergenic | 45.0% |
| GGTGACTCACCTATTGTTTC+TGG | + | chr7_3:33216081-33216100 | None:intergenic | 45.0% | |
| TCATCTCCTCAACAGGCAAA+TGG | - | chr7_3:33216201-33216220 | Msa1101910:intron | 45.0% | |
| TTTGTGTTATGGCCGAGAGA+TGG | + | chr7_3:33216247-33216266 | None:intergenic | 45.0% | |
| !! | CCACGGGTTAGTTTGTGTTA+TGG | + | chr7_3:33216258-33216277 | None:intergenic | 45.0% |
| CCATAACACAAACTAACCCG+TGG | - | chr7_3:33216255-33216274 | Msa1101910:intron | 45.0% | |
| TATCATACCCAGTCAGAAGG+AGG | - | chr7_3:33216285-33216304 | Msa1101910:intron | 45.0% | |
| ATCATACCCAGTCAGAAGGA+GGG | - | chr7_3:33216286-33216305 | Msa1101910:intron | 45.0% | |
| ! | CAAGCGGATCATAAGTTGAC+TGG | + | chr7_3:33216415-33216434 | None:intergenic | 45.0% |
| AACACGTGTCATGCAGACTT+TGG | + | chr7_3:33216726-33216745 | None:intergenic | 45.0% | |
| TGTTATGGAAGACGAGGATG+GGG | + | chr7_3:33216797-33216816 | None:intergenic | 45.0% | |
| CTGTTATGGAAGACGAGGAT+GGG | + | chr7_3:33216798-33216817 | None:intergenic | 45.0% | |
| GAAACTGAGCATGATACCCT+AGG | - | chr7_3:33216882-33216901 | Msa1101910:intron | 45.0% | |
| ! | AGGGGTATGAGTATCACCTA+GGG | + | chr7_3:33216901-33216920 | None:intergenic | 45.0% |
| CGAGTTATCAGTATCAGGAG+GGG | + | chr7_3:33216919-33216938 | None:intergenic | 45.0% | |
| CCGAGTTATCAGTATCAGGA+GGG | + | chr7_3:33216920-33216939 | None:intergenic | 45.0% | |
| CCCTCCTGATACTGATAACT+CGG | - | chr7_3:33216917-33216936 | Msa1101910:intron | 45.0% | |
| TCAGCCGAGTTATCAGTATC+AGG | + | chr7_3:33216924-33216943 | None:intergenic | 45.0% | |
| TTATCACGAGCAGGCTTATC+AGG | + | chr7_3:33216960-33216979 | None:intergenic | 45.0% | |
| TGCTAATCATGCTGGTACTG+TGG | - | chr7_3:33216980-33216999 | Msa1101910:intron | 45.0% | |
| TAATCATGCTGGTACTGTGG+CGG | - | chr7_3:33216983-33217002 | Msa1101910:intron | 45.0% | |
| GATAGGTGCATCCAAGATTG+TGG | + | chr7_3:33217011-33217030 | None:intergenic | 45.0% | |
| GATATTGTTGATGTTGCGGG+GGG | + | chr7_3:33217046-33217065 | None:intergenic | 45.0% | |
| TGGTAGTTTATGGAGGGAGA+TGG | + | chr7_3:33217131-33217150 | None:intergenic | 45.0% | |
| GGAGAGGACTGACAGATTTA+GGG | + | chr7_3:33217173-33217192 | None:intergenic | 45.0% | |
| AGGAGAGGACTGACAGATTT+AGG | + | chr7_3:33217174-33217193 | None:intergenic | 45.0% | |
| CAAATATGTCTGAGCAGGAG+AGG | + | chr7_3:33217189-33217208 | None:intergenic | 45.0% | |
| !! | AAGTGTGTGTATGGTGCTGT+TGG | - | chr7_3:33217272-33217291 | Msa1101910:intron | 45.0% |
| ! | GAATGGTTGATCGGCTTAAC+AGG | - | chr7_3:33217300-33217319 | Msa1101910:intron | 45.0% |
| TTAGCCAATGTAAGGTGACG+TGG | - | chr7_3:33217388-33217407 | Msa1101910:intron | 45.0% | |
| TAGCCAATGTAAGGTGACGT+GGG | - | chr7_3:33217389-33217408 | Msa1101910:intron | 45.0% | |
| GTGGCAACAACAGAGAGAAA+AGG | + | chr7_3:33217626-33217645 | None:intergenic | 45.0% | |
| TGGTTACATTAAGGGACGGA+GGG | + | chr7_3:33217661-33217680 | None:intergenic | 45.0% | |
| TGGGTGGTTACATTAAGGGA+CGG | + | chr7_3:33217665-33217684 | None:intergenic | 45.0% | |
| TGCAAAGGGGGGTTACATTA+AGG | - | chr7_3:33217906-33217925 | Msa1101910:intron | 45.0% | |
| GCAAAGGGGGGTTACATTAA+GGG | - | chr7_3:33217907-33217926 | Msa1101910:intron | 45.0% | |
| ACTTGGTTGCGAATGAAGGA+GGG | + | chr7_3:33218141-33218160 | None:intergenic | 45.0% | |
| AACTTGGTTGCGAATGAAGG+AGG | + | chr7_3:33218142-33218161 | None:intergenic | 45.0% | |
| GAGAACTTGGTTGCGAATGA+AGG | + | chr7_3:33218145-33218164 | None:intergenic | 45.0% | |
| TCAGAGTTCAGTACAATCGG+TGG | - | chr7_3:33218995-33219014 | Msa1101910:intron | 45.0% | |
| ! | GCTGTGGAGTGAGATTTTTG+CGG | - | chr7_3:33219080-33219099 | Msa1101910:intron | 45.0% |
| !!! | CGTTTTCTTGGTGCTGTCAT+CGG | - | chr7_3:33219111-33219130 | Msa1101910:intron | 45.0% |
| ! | TAGCTGCCTTCTGTTGTTTG+CGG | - | chr7_3:33219202-33219221 | Msa1101910:intron | 45.0% |
| AGTACTCCGCAAACAACAGA+AGG | + | chr7_3:33219211-33219230 | None:intergenic | 45.0% | |
| !! | AATTAAATTTAAGTATTTAT+AGG | + | chr7_3:33214632-33214651 | None:intergenic | 5.0% |
| !!! | TTTATTAATATTTATTGTTT+TGG | - | chr7_3:33214673-33214692 | Msa1101910:three_prime_UTR | 5.0% |
| !!! | TTATTTTACTAATTTAAATT+TGG | + | chr7_3:33216456-33216475 | None:intergenic | 5.0% |
| !!! | AATTGTTTTATTTAATTTAA+TGG | + | chr7_3:33216683-33216702 | None:intergenic | 5.0% |
| !! | AAAATGATAAAAAAAAAAAT+TGG | + | chr7_3:33217448-33217467 | None:intergenic | 5.0% |
| ! | ATATGTTGGCCTCAGTGACG+AGG | - | chr7_3:33214585-33214604 | Msa1101910:three_prime_UTR | 50.0% |
| ! | AGCTTAGTTGGATTGGGCCA+TGG | + | chr7_3:33214705-33214724 | None:intergenic | 50.0% |
| TGGCCCAATCCAACTAAGCT+CGG | - | chr7_3:33214705-33214724 | Msa1101910:three_prime_UTR | 50.0% | |
| GACCCGAGCTTAGTTGGATT+GGG | + | chr7_3:33214711-33214730 | None:intergenic | 50.0% | |
| AAGCTACTGCCTGTCTGTTC+TGG | + | chr7_3:33215007-33215026 | None:intergenic | 50.0% | |
| TGCGATGCAGATTCCAAAGG+TGG | + | chr7_3:33215382-33215401 | None:intergenic | 50.0% | |
| GCATGCGATGCAGATTCCAA+AGG | + | chr7_3:33215385-33215404 | None:intergenic | 50.0% | |
| CATACCAAGACCTGTCTACC+AGG | + | chr7_3:33215487-33215506 | None:intergenic | 50.0% | |
| GGTATGACATTGTCAGGCTC+TGG | - | chr7_3:33215501-33215520 | Msa1101910:CDS | 50.0% | |
| AGGGTTGACGAAGAGAGGAT+GGG | - | chr7_3:33215527-33215546 | Msa1101910:CDS | 50.0% | |
| CGAAGAGAGGATGGGATACA+CGG | - | chr7_3:33215535-33215554 | Msa1101910:CDS | 50.0% | |
| TGCTTCCAAGGCTCATCGTA+AGG | - | chr7_3:33215585-33215604 | Msa1101910:CDS | 50.0% | |
| GCTTCCAAGGCTCATCGTAA+GGG | - | chr7_3:33215586-33215605 | Msa1101910:CDS | 50.0% | |
| ! | GTTGTTTCCCAGCAGATCAG+GGG | + | chr7_3:33215621-33215640 | None:intergenic | 50.0% |
| ! | AGATGTGGCTGCTGCCTTTT+TGG | + | chr7_3:33215658-33215677 | None:intergenic | 50.0% |
| GGCAGACAAACAAAGGATGG+TGG | + | chr7_3:33215769-33215788 | None:intergenic | 50.0% | |
| ! | ACGTGTGTTGGTACTCTGGA+TGG | + | chr7_3:33215797-33215816 | None:intergenic | 50.0% |
| ! | CAAGACGTGTGTTGGTACTC+TGG | + | chr7_3:33215801-33215820 | None:intergenic | 50.0% |
| AGCATTGTCTTGTCACCTGG+AGG | + | chr7_3:33215857-33215876 | None:intergenic | 50.0% | |
| !! | TGGAGCATTGTCTTGTCACC+TGG | + | chr7_3:33215860-33215879 | None:intergenic | 50.0% |
| !! | CAGAGGCTTGTTGGATTCGA+TGG | + | chr7_3:33215880-33215899 | None:intergenic | 50.0% |
| TGAGCACTTCAGAGGCTTGT+TGG | + | chr7_3:33215889-33215908 | None:intergenic | 50.0% | |
| GCTGATGTTGAGCACTTCAG+AGG | + | chr7_3:33215897-33215916 | None:intergenic | 50.0% | |
| GAACGACATAACCCGTTCGT+GGG | + | chr7_3:33215945-33215964 | None:intergenic | 50.0% | |
| ACATCAGACATGTCGTTCCG+AGG | + | chr7_3:33215986-33216005 | None:intergenic | 50.0% | |
| TCCTCCTGAATGAGCCATCT+AGG | - | chr7_3:33216134-33216153 | Msa1101910:intron | 50.0% | |
| CCTCCTGAATGAGCCATCTA+GGG | - | chr7_3:33216135-33216154 | Msa1101910:intron | 50.0% | |
| CTGAATGAGCCATCTAGGGA+CGG | - | chr7_3:33216139-33216158 | Msa1101910:intron | 50.0% | |
| TGAATGAGCCATCTAGGGAC+GGG | - | chr7_3:33216140-33216159 | Msa1101910:intron | 50.0% | |
| AGCCACATCATCCAGTGTGA+TGG | - | chr7_3:33216178-33216197 | Msa1101910:intron | 50.0% | |
| GACCATCACACTGGATGATG+TGG | + | chr7_3:33216183-33216202 | None:intergenic | 50.0% | |
| TGAGGAGATGACCATCACAC+TGG | + | chr7_3:33216192-33216211 | None:intergenic | 50.0% | |
| GTGATGGTCATCTCCTCAAC+AGG | - | chr7_3:33216194-33216213 | Msa1101910:intron | 50.0% | |
| CAGCTTCCATTTGCCTGTTG+AGG | + | chr7_3:33216210-33216229 | None:intergenic | 50.0% | |
| AACAGGCAAATGGAAGCTGC+TGG | - | chr7_3:33216211-33216230 | Msa1101910:intron | 50.0% | |
| TCATACCCAGTCAGAAGGAG+GGG | - | chr7_3:33216287-33216306 | Msa1101910:intron | 50.0% | |
| CTAAAACCGGATGCATCCAC+CGG | - | chr7_3:33216311-33216330 | Msa1101910:intron | 50.0% | |
| TAAAACCGGATGCATCCACC+GGG | - | chr7_3:33216312-33216331 | Msa1101910:intron | 50.0% | |
| !! | TAACCGTTGGTTCTGGAACC+CGG | + | chr7_3:33216333-33216352 | None:intergenic | 50.0% |
| TGCCGGTAGAAGATAACCGT+TGG | + | chr7_3:33216346-33216365 | None:intergenic | 50.0% | |
| CGGTTATCTTCTACCGGCAA+CGG | - | chr7_3:33216347-33216366 | Msa1101910:intron | 50.0% | |
| TTATCTTCTACCGGCAACGG+AGG | - | chr7_3:33216350-33216369 | Msa1101910:intron | 50.0% | |
| TATCTTCTACCGGCAACGGA+GGG | - | chr7_3:33216351-33216370 | Msa1101910:intron | 50.0% | |
| GTTATGGAAGACGAGGATGG+GGG | + | chr7_3:33216796-33216815 | None:intergenic | 50.0% | |
| CCTGTTATGGAAGACGAGGA+TGG | + | chr7_3:33216799-33216818 | None:intergenic | 50.0% | |
| CCATCCTCGTCTTCCATAAC+AGG | - | chr7_3:33216796-33216815 | Msa1101910:intron | 50.0% | |
| AGAGCCTGTTATGGAAGACG+AGG | + | chr7_3:33216803-33216822 | None:intergenic | 50.0% | |
| ! | GAGGGGTATGAGTATCACCT+AGG | + | chr7_3:33216902-33216921 | None:intergenic | 50.0% |
| GCCGAGTTATCAGTATCAGG+AGG | + | chr7_3:33216921-33216940 | None:intergenic | 50.0% | |
| AATCATGCTGGTACTGTGGC+GGG | - | chr7_3:33216984-33217003 | Msa1101910:intron | 50.0% | |
| ! | GGACTGACAGATTTAGGGCA+GGG | + | chr7_3:33217168-33217187 | None:intergenic | 50.0% |
| ! | AGGACTGACAGATTTAGGGC+AGG | + | chr7_3:33217169-33217188 | None:intergenic | 50.0% |
| !! | GTGTATGGTGCTGTTGGTGT+TGG | - | chr7_3:33217278-33217297 | Msa1101910:intron | 50.0% |
| !! | TGGTGCTGTTGGTGTTGGAA+TGG | - | chr7_3:33217283-33217302 | Msa1101910:intron | 50.0% |
| ! | TTGATCGGCTTAACAGGTGC+AGG | - | chr7_3:33217306-33217325 | Msa1101910:intron | 50.0% |
| CAATGTAAGGTGACGTGGGT+GGG | - | chr7_3:33217393-33217412 | Msa1101910:intron | 50.0% | |
| AATGTAAGGTGACGTGGGTG+GGG | - | chr7_3:33217394-33217413 | Msa1101910:intron | 50.0% | |
| ! | GGGGAAGGTAAAGCGGTTTT+GGG | + | chr7_3:33217575-33217594 | None:intergenic | 50.0% |
| ! | AGGGGAAGGTAAAGCGGTTT+TGG | + | chr7_3:33217576-33217595 | None:intergenic | 50.0% |
| CGGAGGGAGTAATATATGCG+TGG | + | chr7_3:33217645-33217664 | None:intergenic | 50.0% | |
| GTGGTTACATTAAGGGACGG+AGG | + | chr7_3:33217662-33217681 | None:intergenic | 50.0% | |
| AGGGGGGTTACATTAAGGGA+CGG | - | chr7_3:33217911-33217930 | Msa1101910:intron | 50.0% | |
| GGGTTACATTAAGGGACGGA+GGG | - | chr7_3:33217915-33217934 | Msa1101910:intron | 50.0% | |
| CACAGCTGACACAGAACTCT+CGG | + | chr7_3:33219066-33219085 | None:intergenic | 50.0% | |
| ! | AGTCTTGGTGGCATGTGTTG+TGG | - | chr7_3:33219274-33219293 | Msa1101910:intron | 50.0% |
| AGTATACCCGTGCTAACGCA+CGG | - | chr7_3:33219363-33219382 | Msa1101910:intron | 50.0% | |
| GGCCCAATCCAACTAAGCTC+GGG | - | chr7_3:33214706-33214725 | Msa1101910:three_prime_UTR | 55.0% | |
| GGACCCGAGCTTAGTTGGAT+TGG | + | chr7_3:33214712-33214731 | None:intergenic | 55.0% | |
| GTGCACGAACCAGAACAGAC+AGG | - | chr7_3:33214995-33215014 | Msa1101910:exon | 55.0% | |
| AGACACTACTGCTCCTCCTG+TGG | - | chr7_3:33215261-33215280 | Msa1101910:CDS | 55.0% | |
| CAGGTCATTACCAGCATGCG+AGG | + | chr7_3:33215417-33215436 | None:intergenic | 55.0% | |
| !! | ACATTGTCAGGCTCTGGAGC+AGG | - | chr7_3:33215507-33215526 | Msa1101910:CDS | 55.0% |
| !! | CATTGTCAGGCTCTGGAGCA+GGG | - | chr7_3:33215508-33215527 | Msa1101910:CDS | 55.0% |
| CAGGGTTGACGAAGAGAGGA+TGG | - | chr7_3:33215526-33215545 | Msa1101910:CDS | 55.0% | |
| AGGTCCCTTACGATGAGCCT+TGG | + | chr7_3:33215593-33215612 | None:intergenic | 55.0% | |
| AAGGCTCATCGTAAGGGACC+TGG | - | chr7_3:33215592-33215611 | Msa1101910:CDS | 55.0% | |
| ! | GCATTTTGCCCCAGCAGATG+TGG | + | chr7_3:33215673-33215692 | None:intergenic | 55.0% |
| GGTTCCCCGACCTTCTACTA+CGG | + | chr7_3:33215700-33215719 | None:intergenic | 55.0% | |
| !! | AAGGATGGTGGGTCACTTGC+CGG | + | chr7_3:33215757-33215776 | None:intergenic | 55.0% |
| CGAACGACATAACCCGTTCG+TGG | + | chr7_3:33215946-33215965 | None:intergenic | 55.0% | |
| CCCTAGATGGCTCATTCAGG+AGG | + | chr7_3:33216138-33216157 | None:intergenic | 55.0% | |
| CGTCCCTAGATGGCTCATTC+AGG | + | chr7_3:33216141-33216160 | None:intergenic | 55.0% | |
| TAGGCATACCCGTCCCTAGA+TGG | + | chr7_3:33216151-33216170 | None:intergenic | 55.0% | |
| TTAGGCCCCTCCTTCTGACT+GGG | + | chr7_3:33216295-33216314 | None:intergenic | 55.0% | |
| TTTAGGCCCCTCCTTCTGAC+TGG | + | chr7_3:33216296-33216315 | None:intergenic | 55.0% | |
| CAGAAGGAGGGGCCTAAAAC+CGG | - | chr7_3:33216298-33216317 | Msa1101910:intron | 55.0% | |
| ! | CGGTGGATGCATCCGGTTTT+AGG | + | chr7_3:33216313-33216332 | None:intergenic | 55.0% |
| AACGGAGGGACAGAGCAGAA+AGG | - | chr7_3:33216365-33216384 | Msa1101910:intron | 55.0% | |
| CCTGCATGCAGAGCCTGTTA+TGG | + | chr7_3:33216812-33216831 | None:intergenic | 55.0% | |
| CCATAACAGGCTCTGCATGC+AGG | - | chr7_3:33216809-33216828 | Msa1101910:intron | 55.0% | |
| CCTCAGCCACAGTATGTCGA+GGG | + | chr7_3:33216836-33216855 | None:intergenic | 55.0% | |
| TCCTCAGCCACAGTATGTCG+AGG | + | chr7_3:33216837-33216856 | None:intergenic | 55.0% | |
| TCGACATACTGTGGCTGAGG+AGG | - | chr7_3:33216836-33216855 | Msa1101910:intron | 55.0% | |
| ! | GCAGGGAGGCATGTTCCTAA+TGG | + | chr7_3:33217151-33217170 | None:intergenic | 55.0% |
| ! | CTGACAGATTTAGGGCAGGG+AGG | + | chr7_3:33217165-33217184 | None:intergenic | 55.0% |
| CCACCCACGTCACCTTACAT+TGG | + | chr7_3:33217395-33217414 | None:intergenic | 55.0% | |
| CCAATGTAAGGTGACGTGGG+TGG | - | chr7_3:33217392-33217411 | Msa1101910:intron | 55.0% | |
| GGGGTTACATTAAGGGACGG+AGG | - | chr7_3:33217914-33217933 | Msa1101910:intron | 55.0% | |
| CGAGAGTTCTGTGTCAGCTG+TGG | - | chr7_3:33219064-33219083 | Msa1101910:intron | 55.0% | |
| GTATACCCGTGCTAACGCAC+GGG | - | chr7_3:33219364-33219383 | Msa1101910:intron | 55.0% | |
| ACTGAACCCGTGCGTTAGCA+CGG | + | chr7_3:33219373-33219392 | None:intergenic | 55.0% | |
| TTGAGCAGCAGCCAGTTCCG+AGG | + | chr7_3:33215302-33215321 | None:intergenic | 60.0% | |
| TACCAGCATGCGAGGCAGAG+TGG | + | chr7_3:33215409-33215428 | None:intergenic | 60.0% | |
| GGAGCAGGGTTGACGAAGAG+AGG | - | chr7_3:33215522-33215541 | Msa1101910:CDS | 60.0% | |
| CTGGTGACCCCTGATCTGCT+GGG | - | chr7_3:33215611-33215630 | Msa1101910:CDS | 60.0% | |
| AAGGCAGCAGCCACATCTGC+TGG | - | chr7_3:33215660-33215679 | Msa1101910:CDS | 60.0% | |
| AGGCAGCAGCCACATCTGCT+GGG | - | chr7_3:33215661-33215680 | Msa1101910:CDS | 60.0% | |
| TACTGCCTCAGAACCCGCTC+CGG | - | chr7_3:33215735-33215754 | Msa1101910:intron | 60.0% | |
| GGTCTCCTGCTGCCATCTCT+CGG | - | chr7_3:33216232-33216251 | Msa1101910:intron | 60.0% | |
| TATGGCCGAGAGATGGCAGC+AGG | + | chr7_3:33216240-33216259 | None:intergenic | 60.0% | |
| TGGAACCCGGTGGATGCATC+CGG | + | chr7_3:33216320-33216339 | None:intergenic | 60.0% | |
| CCACCGGGTTCCAGAACCAA+CGG | - | chr7_3:33216327-33216346 | Msa1101910:intron | 60.0% | |
| GACATCTCATAAGGCCCCCC+TGG | - | chr7_3:33216766-33216785 | Msa1101910:intron | 60.0% | |
| ACGAGGATGGGGGCTTTCCA+GGG | + | chr7_3:33216786-33216805 | None:intergenic | 60.0% | |
| GCAGGACCCTCGACATACTG+TGG | - | chr7_3:33216827-33216846 | Msa1101910:intron | 60.0% | |
| CCCTCGACATACTGTGGCTG+AGG | - | chr7_3:33216833-33216852 | Msa1101910:intron | 60.0% | |
| TGTGGCTGAGGAGGTTGCTC+AGG | - | chr7_3:33216845-33216864 | Msa1101910:intron | 60.0% | |
| !! | CTGTGGCGGGTCCACAATCT+TGG | - | chr7_3:33216997-33217016 | Msa1101910:intron | 60.0% |
| GGGGGATCGACGTCACAGAT+AGG | + | chr7_3:33217028-33217047 | None:intergenic | 60.0% | |
| TCAAGGTCGAGGGAGAGTGG+GGG | + | chr7_3:33217080-33217099 | None:intergenic | 60.0% | |
| GTCAAGGTCGAGGGAGAGTG+GGG | + | chr7_3:33217081-33217100 | None:intergenic | 60.0% | |
| GGTCAAGGTCGAGGGAGAGT+GGG | + | chr7_3:33217082-33217101 | None:intergenic | 60.0% | |
| AGGTCAAGGTCGAGGGAGAG+TGG | + | chr7_3:33217083-33217102 | None:intergenic | 60.0% | |
| CTCTCCCTCGACCTTGACCT+CGG | - | chr7_3:33217083-33217102 | Msa1101910:intron | 60.0% | |
| CTGAACCCGTGCGTTAGCAC+GGG | + | chr7_3:33219372-33219391 | None:intergenic | 60.0% | |
| GGGTCGGACCCGAGCTTAGT+TGG | + | chr7_3:33214717-33214736 | None:intergenic | 65.0% | |
| CTGCTCCTCCTGTGGACTCC+TGG | - | chr7_3:33215269-33215288 | Msa1101910:CDS | 65.0% | |
| GAGGTCCAGGAGTCCACAGG+AGG | + | chr7_3:33215277-33215296 | None:intergenic | 65.0% | |
| GAGGAGGTCCAGGAGTCCAC+AGG | + | chr7_3:33215280-33215299 | None:intergenic | 65.0% | |
| GGACTCCTGGACCTCCTCCT+CGG | - | chr7_3:33215282-33215301 | Msa1101910:CDS | 65.0% | |
| CAGTTCCGAGGAGGAGGTCC+AGG | + | chr7_3:33215290-33215309 | None:intergenic | 65.0% | |
| CTGGACCTCCTCCTCGGAAC+TGG | - | chr7_3:33215288-33215307 | Msa1101910:CDS | 65.0% | |
| AGCAGCCAGTTCCGAGGAGG+AGG | + | chr7_3:33215296-33215315 | None:intergenic | 65.0% | |
| AGCAGCAGCCAGTTCCGAGG+AGG | + | chr7_3:33215299-33215318 | None:intergenic | 65.0% | |
| CTCCACTCTGCCTCGCATGC+TGG | - | chr7_3:33215404-33215423 | Msa1101910:CDS | 65.0% | |
| GAGGATGTCTGGCCCACTCC+TGG | - | chr7_3:33215448-33215467 | Msa1101910:CDS | 65.0% | |
| CCAGCAGATCAGGGGTCACC+AGG | + | chr7_3:33215613-33215632 | None:intergenic | 65.0% | |
| CCTGGTGACCCCTGATCTGC+TGG | - | chr7_3:33215610-33215629 | Msa1101910:CDS | 65.0% | |
| GGCAGCAGCCACATCTGCTG+GGG | - | chr7_3:33215662-33215681 | Msa1101910:CDS | 65.0% | |
| ! | ACTTGCCGGAGCGGGTTCTG+AGG | + | chr7_3:33215743-33215762 | None:intergenic | 65.0% |
| ! | TGGTGGGTCACTTGCCGGAG+CGG | + | chr7_3:33215752-33215771 | None:intergenic | 65.0% |
| ! | TCGGTGCTCGTACGACCTCC+AGG | - | chr7_3:33215839-33215858 | Msa1101910:intron | 65.0% |
| !! | CCGTTGGTTCTGGAACCCGG+TGG | + | chr7_3:33216330-33216349 | None:intergenic | 65.0% |
| CTGCTCTGTCCCTCCGTTGC+CGG | + | chr7_3:33216363-33216382 | None:intergenic | 65.0% | |
| TGACTGGCGTCTCGCACGAG+AGG | + | chr7_3:33216399-33216418 | None:intergenic | 65.0% | |
| AGGATGGGGGCTTTCCAGGG+GGG | + | chr7_3:33216783-33216802 | None:intergenic | 65.0% | |
| GAGGATGGGGGCTTTCCAGG+GGG | + | chr7_3:33216784-33216803 | None:intergenic | 65.0% | |
| CGAGGATGGGGGCTTTCCAG+GGG | + | chr7_3:33216785-33216804 | None:intergenic | 65.0% | |
| GACGAGGATGGGGGCTTTCC+AGG | + | chr7_3:33216787-33216806 | None:intergenic | 65.0% | |
| CAAGGTCGAGGGAGAGTGGG+GGG | + | chr7_3:33217079-33217098 | None:intergenic | 65.0% | |
| CTGGCCGAGGTCAAGGTCGA+GGG | + | chr7_3:33217090-33217109 | None:intergenic | 65.0% | |
| CTTGACCTCGGCCAGGAGGA+GGG | - | chr7_3:33217095-33217114 | Msa1101910:intron | 65.0% | |
| GATGCACTACGCCCTCCTCC+TGG | + | chr7_3:33217109-33217128 | None:intergenic | 65.0% | |
| GGTGGGTCACTTGCCGGAGC+GGG | + | chr7_3:33215751-33215770 | None:intergenic | 70.0% | |
| CCTGGCCGAGGTCAAGGTCG+AGG | + | chr7_3:33217091-33217110 | None:intergenic | 70.0% | |
| CCTCGACCTTGACCTCGGCC+AGG | - | chr7_3:33217088-33217107 | Msa1101910:intron | 70.0% | |
| CGACCTTGACCTCGGCCAGG+AGG | - | chr7_3:33217091-33217110 | Msa1101910:intron | 70.0% | |
| CCTCCTCCTGGCCGAGGTCA+AGG | + | chr7_3:33217097-33217116 | None:intergenic | 70.0% | |
| CCTTGACCTCGGCCAGGAGG+AGG | - | chr7_3:33217094-33217113 | Msa1101910:intron | 70.0% | |
| CTACGCCCTCCTCCTGGCCG+AGG | + | chr7_3:33217103-33217122 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 33214547 | 33219543 | 33214547 | ID=Msa1101910;Name=Msa1101910 |
| chr7_3 | mRNA | 33214547 | 33219543 | 33214547 | ID=Msa1101910-mRNA-1;Parent=Msa1101910;Name=Msa1101910-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0|0.5|0.5|0|0.5|2|452|249 |
| chr7_3 | exon | 33214547 | 33215743 | 33214547 | ID=Msa1101910-mRNA-1:exon:7161;Parent=Msa1101910-mRNA-1 |
| chr7_3 | exon | 33219539 | 33219543 | 33219539 | ID=Msa1101910-mRNA-1:exon:7160;Parent=Msa1101910-mRNA-1 |
| chr7_3 | CDS | 33219539 | 33219543 | 33219539 | ID=Msa1101910-mRNA-1:cds;Parent=Msa1101910-mRNA-1 |
| chr7_3 | CDS | 33214999 | 33215743 | 33214999 | ID=Msa1101910-mRNA-1:cds;Parent=Msa1101910-mRNA-1 |
| chr7_3 | three_prime_UTR | 33214547 | 33214998 | 33214547 | ID=Msa1101910-mRNA-1:three_prime_utr;Parent=Msa1101910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
