AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1102800


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1102800 MtrunA17_Chr7g0232341 94.492 472 26 0 1 472 1 472 0.0 915
Msa1102800 MtrunA17_Chr7g0232331 93.008 472 33 0 1 472 1 472 0.0 900
Msa1102800 MtrunA17_Chr7g0232411 82.415 472 82 1 1 472 1 471 0.0 801
Msa1102800 MtrunA17_Chr7g0232391 83.439 471 77 1 1 471 1 470 0.0 795
Msa1102800 MtrunA17_Chr7g0232351 85.488 379 54 1 1 379 1 378 0.0 650
Msa1102800 MtrunA17_Chr7g0232401 54.947 475 205 5 1 470 1 471 0.0 531
Msa1102800 MtrunA17_Chr8g0336741 56.114 458 199 2 6 463 13 468 0.0 527
Msa1102800 MtrunA17_Chr1g0153451 55.532 470 204 3 1 469 1 466 0.0 525
Msa1102800 MtrunA17_Chr8g0336731 55.195 462 205 2 9 470 35 494 0.0 520
Msa1102800 MtrunA17_Chr8g0336651 55.106 470 209 2 1 470 1 468 4.80e-180 537
Msa1102800 MtrunA17_Chr8g0336651 54.352 471 209 5 3 469 778 1246 1.02e-170 513
Msa1102800 MtrunA17_Chr8g0336651 48.057 283 113 4 188 469 528 777 4.11e-77 262
Msa1102800 MtrunA17_Chr8g0336691 55.297 472 205 4 1 469 8 476 2.37e-171 518
Msa1102800 MtrunA17_Chr8g0336691 54.797 469 208 4 3 469 916 1382 2.15e-169 513
Msa1102800 MtrunA17_Chr8g0336691 50.000 470 207 3 3 472 477 918 6.85e-156 477
Msa1102800 MtrunA17_Chr6g0449931 50.524 477 223 6 1 470 1 471 3.57e-166 477
Msa1102800 MtrunA17_Chr8g0334861 51.464 478 215 10 1 471 1 468 4.03e-157 454
Msa1102800 MtrunA17_Chr8g0373301 49.683 473 217 9 4 467 7 467 3.20e-155 449
Msa1102800 MtrunA17_Chr8g0334851 47.390 479 237 8 1 470 1 473 1.45e-151 440
Msa1102800 MtrunA17_Chr7g0232311 51.288 466 220 4 1 464 1 461 3.66e-151 438
Msa1102800 MtrunA17_Chr8g0339631 48.319 476 234 8 1 469 1 471 3.68e-149 434
Msa1102800 MtrunA17_Chr7g0275511 45.572 463 240 4 7 463 16 472 5.64e-149 433
Msa1102800 MtrunA17_Chr6g0459311 47.246 472 239 8 1 468 8 473 3.75e-146 426
Msa1102800 MtrunA17_Chr8g0339461 47.579 475 236 7 1 466 1 471 1.54e-145 424
Msa1102800 MtrunA17_Chr6g0486251 47.537 467 235 8 1 463 1 461 7.18e-145 422
Msa1102800 MtrunA17_Chr6g0486201 47.537 467 235 8 1 463 1 461 7.18e-145 422
Msa1102800 MtrunA17_Chr8g0335161 47.158 475 237 9 1 468 1 468 6.00e-143 417
Msa1102800 MtrunA17_Chr8g0339451 46.467 467 237 7 9 466 1 463 4.48e-142 415
Msa1102800 MtrunA17_Chr8g0339441 47.689 476 196 8 1 468 1 431 1.31e-140 410
Msa1102800 MtrunA17_Chr8g0347281 44.783 460 242 7 7 463 19 469 3.18e-137 403
Msa1102800 MtrunA17_Chr8g0335141 45.781 474 244 8 1 468 4 470 5.35e-136 400
Msa1102800 MtrunA17_Chr8g0347271 43.913 460 246 6 7 463 20 470 5.39e-135 398
Msa1102800 MtrunA17_Chr8g0361371 43.867 481 243 9 3 468 4 472 2.58e-134 396
Msa1102800 MtrunA17_Chr8g0334831 43.737 487 248 8 1 468 1 480 3.76e-131 388
Msa1102800 MtrunA17_Chr8g0339601 48.494 332 163 5 144 469 4 333 1.47e-105 317
Msa1102800 MtrunA17_Chr8g0370941 41.935 496 252 16 1 468 3 490 1.65e-105 323
Msa1102800 MtrunA17_Chr5g0403641 38.509 483 248 13 1 467 54 503 4.10e-93 291
Msa1102800 MtrunA17_Chr6g0462521 36.831 467 261 14 7 463 5 447 1.29e-87 275
Msa1102800 MtrunA17_Chr6g0462531 36.326 479 261 11 7 463 5 461 1.20e-84 268
Msa1102800 MtrunA17_Chr6g0462551 34.389 442 263 7 14 441 12 440 7.35e-83 264
Msa1102800 MtrunA17_Chr6g0449991 43.103 348 166 7 1 340 1 324 1.24e-81 255
Msa1102800 MtrunA17_Chr6g0462571 35.440 443 254 10 14 441 12 437 3.48e-81 259
Msa1102800 MtrunA17_Chr1g0153461 56.944 216 91 2 255 469 1 215 4.67e-81 250
Msa1102800 MtrunA17_Chr6g0462541 34.690 467 270 12 14 463 12 460 1.99e-79 255
Msa1102800 MtrunA17_Chr3g0079731 32.359 479 304 10 1 462 1 476 1.10e-75 245
Msa1102800 MtrunA17_Chr5g0448521 31.453 461 285 14 3 444 2 450 7.89e-65 216
Msa1102800 MtrunA17_Chr5g0442541 31.910 445 268 14 3 428 2 430 1.07e-63 213
Msa1102800 MtrunA17_Chr5g0442581 31.612 484 294 17 3 462 2 472 5.17e-63 213
Msa1102800 MtrunA17_Chr5g0442491 31.687 486 289 16 3 462 2 470 5.31e-62 209
Msa1102800 MtrunA17_Chr5g0442521 30.408 490 302 15 3 469 2 475 1.60e-60 205
Msa1102800 MtrunA17_Chr2g0302961 30.992 484 290 18 7 468 6 467 1.10e-58 200
Msa1102800 MtrunA17_Chr5g0429681 32.135 445 269 14 1 428 39 467 1.59e-58 201
Msa1102800 MtrunA17_Chr5g0442601 29.209 493 294 18 3 462 401 871 1.35e-57 204
Msa1102800 MtrunA17_Chr5g0442601 33.333 318 176 8 94 402 43 333 2.07e-42 160
Msa1102800 MtrunA17_Chr2g0302991 30.818 477 297 16 7 468 6 464 1.57e-57 197
Msa1102800 MtrunA17_Chr5g0429711 31.381 478 282 18 3 462 8 457 2.80e-57 196
Msa1102800 MtrunA17_Chr5g0442561 30.820 451 272 18 3 428 2 437 7.40e-57 195
Msa1102800 MtrunA17_Chr5g0442511 31.544 447 251 17 3 428 46 458 1.11e-56 196
Msa1102800 MtrunA17_Chr5g0426431 30.584 497 272 17 5 462 11 473 1.07e-52 184
Msa1102800 MtrunA17_Chr3g0092641 30.522 498 269 18 6 462 12 473 3.77e-52 183
Msa1102800 MtrunA17_Chr5g0414331 29.132 484 283 13 3 466 10 453 1.75e-50 178
Msa1102800 MtrunA17_Chr8g0366391 29.697 495 294 17 6 469 9 480 7.51e-49 174
Msa1102800 MtrunA17_Chr5g0414321 28.660 485 284 14 3 466 8 451 8.27e-49 174
Msa1102800 MtrunA17_Chr5g0440421 30.242 496 291 16 3 459 7 486 9.38e-49 174
Msa1102800 MtrunA17_Chr1g0159551 28.571 469 285 15 13 463 21 457 9.87e-49 173
Msa1102800 MtrunA17_Chr1g0173121 30.645 372 232 7 96 463 111 460 1.13e-48 173
Msa1102800 MtrunA17_Chr3g0118671 29.354 511 278 21 1 466 1 473 1.55e-48 173
Msa1102800 MtrunA17_Chr7g0243931 29.550 511 279 21 6 469 17 493 2.92e-48 173
Msa1102800 MtrunA17_Chr4g0053501 26.526 475 314 11 6 466 11 464 3.02e-48 173
Msa1102800 MtrunA17_Chr7g0265101 30.223 493 287 17 5 460 8 480 4.39e-48 172
Msa1102800 MtrunA17_Chr4g0044511 29.939 491 290 17 6 467 40 505 5.43e-48 172
Msa1102800 MtrunA17_Chr4g0050341 27.778 504 291 17 6 467 19 491 6.45e-48 172
Msa1102800 MtrunA17_Chr8g0382021 31.980 394 223 13 59 441 105 464 7.75e-48 171
Msa1102800 MtrunA17_Chr5g0420801 28.310 491 293 14 5 470 6 462 1.28e-47 170
Msa1102800 MtrunA17_Chr2g0278711 28.138 494 302 14 2 466 7 476 1.87e-47 170
Msa1102800 MtrunA17_Chr3g0078841 27.484 473 279 14 6 442 10 454 6.23e-47 169
Msa1102800 MtrunA17_Chr6g0464871 31.957 460 233 17 6 433 23 434 1.17e-46 168
Msa1102800 MtrunA17_Chr5g0426401 34.426 305 171 7 169 462 20 306 1.34e-46 164
Msa1102800 MtrunA17_Chr7g0243871 37.908 306 150 12 168 455 177 460 1.56e-46 168
Msa1102800 MtrunA17_Chr2g0329111 29.769 477 293 17 1 453 1 459 1.78e-46 168
Msa1102800 MtrunA17_Chr4g0032331 36.538 260 144 7 207 463 205 446 2.55e-45 164
Msa1102800 MtrunA17_Chr7g0265141 30.661 499 283 20 6 465 9 483 3.50e-45 164
Msa1102800 MtrunA17_Chr6g0464881 29.039 489 274 17 6 466 11 454 5.05e-45 163
Msa1102800 MtrunA17_Chr6g0464841 30.283 459 246 16 4 433 9 422 6.56e-45 163
Msa1102800 MtrunA17_Chr3g0112771 36.882 263 146 7 207 466 206 451 1.13e-44 162
Msa1102800 MtrunA17_Chr7g0243681 37.011 281 144 9 207 469 217 482 1.15e-44 163
Msa1102800 MtrunA17_Chr7g0265051 29.592 490 290 18 6 460 9 478 2.25e-44 162
Msa1102800 MtrunA17_Chr8g0337381 58.400 125 49 2 339 463 1 122 2.51e-44 152
Msa1102800 MtrunA17_Chr8g0369341 28.689 488 305 13 5 470 6 472 2.89e-44 161
Msa1102800 MtrunA17_Chr6g0464921 28.074 488 281 16 6 466 11 455 4.15e-44 160
Msa1102800 MtrunA17_Chr4g0053321 27.391 460 307 11 17 466 37 479 5.73e-44 161
Msa1102800 MtrunA17_Chr7g0249981 27.572 486 293 14 1 466 20 466 7.77e-44 160
Msa1102800 MtrunA17_Chr5g0419761 32.723 382 212 13 108 462 118 481 8.94e-44 160
Msa1102800 MtrunA17_Chr5g0431441 28.998 469 269 16 6 448 18 448 8.98e-44 160
Msa1102800 MtrunA17_Chr8g0380531 27.733 494 282 13 6 468 10 459 1.67e-43 159
Msa1102800 MtrunA17_Chr7g0243951 26.600 500 307 14 6 469 11 486 3.79e-43 159
Msa1102800 MtrunA17_Chr5g0431361 27.292 480 292 16 6 466 12 453 5.16e-43 157
Msa1102800 MtrunA17_Chr3g0079711 42.623 183 100 4 284 462 3 184 8.03e-43 150
Msa1102800 MtrunA17_Chr6g0454341 26.778 478 282 14 3 442 7 454 1.10e-42 157
Msa1102800 MtrunA17_Chr6g0454151 29.167 360 210 9 108 445 121 457 1.21e-42 157
Msa1102800 MtrunA17_Chr6g0454301 27.254 477 281 16 3 442 260 707 1.33e-42 160
Msa1102800 MtrunA17_Chr6g0454301 28.279 244 142 8 235 469 6 225 2.60e-29 121
Msa1102800 MtrunA17_Chr7g0243781 34.277 318 175 11 169 469 178 478 1.48e-42 157
Msa1102800 MtrunA17_Chr7g0243801 35.689 283 146 9 207 469 213 479 1.50e-42 157
Msa1102800 MtrunA17_Chr4g0044521 37.226 274 142 8 207 462 201 462 1.62e-42 157
Msa1102800 MtrunA17_Chr6g0464861 29.783 460 242 15 6 433 11 421 1.93e-42 156
Msa1102800 MtrunA17_Chr3g0118691 27.975 479 265 17 6 441 15 456 2.02e-42 157
Msa1102800 MtrunA17_Chr4g0072761 29.087 471 283 15 6 462 15 448 2.06e-42 156
Msa1102800 MtrunA17_Chr7g0218841 28.132 455 275 12 1 440 1 418 2.16e-42 155
Msa1102800 MtrunA17_Chr3g0118771 28.512 477 263 18 6 440 21 461 2.18e-42 157
Msa1102800 MtrunA17_Chr3g0118701 27.789 475 271 17 6 441 15 456 2.35e-42 156
Msa1102800 MtrunA17_Chr7g0218831 26.580 459 276 11 1 440 1 417 3.52e-42 155
Msa1102800 MtrunA17_Chr6g0454201 33.209 268 151 6 184 442 209 457 4.27e-42 155
Msa1102800 MtrunA17_Chr7g0265151 28.838 482 278 18 12 455 17 471 5.30e-42 155
Msa1102800 MtrunA17_Chr7g0218791 28.661 478 287 14 6 465 5 446 5.50e-42 155
Msa1102800 MtrunA17_Chr7g0217881 27.749 382 211 14 108 469 121 457 1.72e-41 154
Msa1102800 MtrunA17_Chr3g0118711 26.465 495 288 17 6 461 13 470 1.82e-41 154
Msa1102800 MtrunA17_Chr6g0453961 27.696 473 281 16 6 442 19 466 1.96e-41 154
Msa1102800 MtrunA17_Chr7g0275681 37.956 274 137 8 207 462 218 476 3.20e-41 153
Msa1102800 MtrunA17_Chr4g0060511 35.439 285 148 8 207 469 220 490 5.60e-41 153
Msa1102800 MtrunA17_Chr6g0463861 31.818 286 169 8 206 472 201 479 6.77e-41 152
Msa1102800 MtrunA17_Chr7g0243631 34.965 286 148 8 207 469 219 489 8.92e-41 152
Msa1102800 MtrunA17_Chr1g0207981 26.349 482 312 16 6 466 13 472 9.86e-41 152
Msa1102800 MtrunA17_Chr8g0359821 25.971 489 302 16 3 457 7 469 1.01e-40 152
Msa1102800 MtrunA17_Chr6g0454321 25.755 497 305 14 3 463 7 475 1.26e-40 154
Msa1102800 MtrunA17_Chr4g0072771 28.481 474 285 14 6 462 25 461 1.50e-40 151
Msa1102800 MtrunA17_Chr7g0243771 34.982 283 148 9 207 469 212 478 1.69e-40 151
Msa1102800 MtrunA17_Chr1g0179901 28.512 484 295 18 6 455 16 482 1.82e-40 151
Msa1102800 MtrunA17_Chr8g0336331 27.447 470 288 13 3 442 7 453 1.86e-40 151
Msa1102800 MtrunA17_Chr3g0118721 35.656 244 126 8 208 440 39 262 1.87e-40 147
Msa1102800 MtrunA17_Chr7g0249931 27.812 489 294 16 2 469 36 486 1.89e-40 151
Msa1102800 MtrunA17_Chr3g0112761 28.750 480 293 17 2 466 4 449 2.08e-40 150
Msa1102800 MtrunA17_Chr4g0044501 31.467 375 226 12 112 472 121 478 2.62e-40 151
Msa1102800 MtrunA17_Chr5g0401851 36.042 283 149 8 207 469 216 486 4.03e-40 150
Msa1102800 MtrunA17_Chr5g0401721 26.186 485 302 20 7 462 9 466 4.14e-40 150
Msa1102800 MtrunA17_Chr7g0218821 28.918 453 275 14 6 440 5 428 4.39e-40 149
Msa1102800 MtrunA17_Chr6g0454401 26.955 486 274 16 3 442 7 457 4.41e-40 150
Msa1102800 MtrunA17_Chr4g0011051 28.252 492 287 19 6 455 9 476 6.61e-40 150
Msa1102800 MtrunA17_Chr7g0235051 34.722 288 149 8 184 449 167 437 8.46e-40 149
Msa1102800 MtrunA17_Chr4g0066221 33.688 282 161 8 207 469 209 483 9.69e-40 149
Msa1102800 MtrunA17_Chr7g0243611 40.517 232 107 8 184 402 58 271 1.85e-39 144
Msa1102800 MtrunA17_Chr6g0453951 26.891 476 286 18 3 442 54 503 2.05e-39 149
Msa1102800 MtrunA17_Chr5g0423981 27.152 453 255 13 6 433 10 412 2.52e-39 147
Msa1102800 MtrunA17_Chr8g0355221 34.579 321 172 12 169 467 183 487 2.54e-39 148
Msa1102800 MtrunA17_Chr8g0334841 48.322 149 75 1 169 317 1 147 2.64e-39 140
Msa1102800 MtrunA17_Chr4g0066151 34.167 240 134 5 206 427 207 440 4.23e-39 147
Msa1102800 MtrunA17_Chr7g0218811 26.981 467 295 11 6 462 15 445 5.57e-39 146
Msa1102800 MtrunA17_Chr6g0454261 28.689 366 214 11 108 449 121 463 5.80e-39 147
Msa1102800 MtrunA17_Chr4g0042931 28.667 450 293 13 3 438 4 439 6.18e-39 147
Msa1102800 MtrunA17_Chr7g0243861 35.088 285 149 8 207 469 220 490 6.99e-39 147
Msa1102800 MtrunA17_Chr5g0431401 25.510 490 285 14 6 466 10 448 9.77e-39 146
Msa1102800 MtrunA17_Chr7g0243761 37.165 261 131 7 207 447 217 464 1.21e-38 146
Msa1102800 MtrunA17_Chr7g0243851 34.386 285 151 9 207 469 175 445 1.37e-38 145
Msa1102800 MtrunA17_Chr4g0014061 32.394 284 157 7 207 469 206 475 1.67e-38 146
Msa1102800 MtrunA17_Chr7g0243911 41.791 201 94 5 252 440 16 205 1.73e-38 139
Msa1102800 MtrunA17_Chr7g0250001 27.515 487 292 17 1 466 1 447 2.96e-38 145
Msa1102800 MtrunA17_Chr5g0416741 33.779 299 164 8 189 469 204 486 4.53e-38 145
Msa1102800 MtrunA17_Chr4g0066261 27.826 460 270 16 50 469 47 484 5.27e-38 144
Msa1102800 MtrunA17_Chr8g0361411 27.856 499 283 20 2 469 4 456 6.65e-38 144
Msa1102800 MtrunA17_Chr7g0243711 37.662 231 120 6 251 469 101 319 8.04e-38 140
Msa1102800 MtrunA17_Chr3g0122001 28.687 495 293 19 1 462 481 948 8.23e-38 147
Msa1102800 MtrunA17_Chr3g0122001 27.953 508 298 19 1 472 1 476 6.44e-36 141
Msa1102800 MtrunA17_Chr8g0374971 31.561 301 174 9 193 469 191 483 9.15e-38 144
Msa1102800 MtrunA17_Chr7g0249961 34.884 215 122 4 256 470 67 263 1.35e-37 138
Msa1102800 MtrunA17_Chr6g0452771 28.693 352 218 7 108 442 121 456 1.84e-37 143
Msa1102800 MtrunA17_Chr8g0374901 33.216 283 161 9 207 469 207 481 2.36e-37 142
Msa1102800 MtrunA17_Chr3g0121991 27.366 486 312 13 1 462 74 542 2.98e-37 143
Msa1102800 MtrunA17_Chr7g0265041 31.624 351 207 10 131 462 148 484 3.83e-37 142
Msa1102800 MtrunA17_Chr6g0454361 30.859 256 149 6 196 442 221 457 4.02e-37 142
Msa1102800 MtrunA17_Chr4g0044481 35.537 242 134 6 169 402 170 397 4.34e-37 141
Msa1102800 MtrunA17_Chr1g0207861 27.991 468 255 17 4 431 6 431 4.53e-37 142
Msa1102800 MtrunA17_Chr8g0377921 27.801 482 280 16 7 455 5 451 4.62e-37 141
Msa1102800 MtrunA17_Chr6g0454121 26.722 479 291 16 1 444 4 457 5.70e-37 141
Msa1102800 MtrunA17_Chr4g0066131 31.690 284 166 8 206 469 202 477 5.95e-37 141
Msa1102800 MtrunA17_Chr6g0454291 27.119 472 284 16 6 442 7 453 6.13e-37 141
Msa1102800 MtrunA17_Chr4g0042891 26.432 454 300 14 3 438 4 441 7.62e-37 141
Msa1102800 MtrunA17_Chr3g0118661 26.696 457 270 16 2 422 9 436 8.46e-37 141
Msa1102800 MtrunA17_Chr6g0454181 26.360 478 286 15 3 442 7 456 1.22e-36 140
Msa1102800 MtrunA17_Chr1g0207971 28.645 391 212 12 105 469 104 453 1.28e-36 140
Msa1102800 MtrunA17_Chr6g0454331 25.673 483 279 16 6 442 7 455 1.46e-36 140
Msa1102800 MtrunA17_Chr5g0431371 26.931 479 292 17 6 466 10 448 1.52e-36 140
Msa1102800 MtrunA17_Chr6g0463891 29.948 384 217 12 112 464 124 486 3.17e-36 140
Msa1102800 MtrunA17_Chr8g0374941 32.624 282 162 9 207 468 1146 1419 3.28e-36 142
Msa1102800 MtrunA17_Chr8g0374941 34.615 260 145 7 207 447 673 926 1.46e-35 140
Msa1102800 MtrunA17_Chr8g0374941 32.700 263 150 8 207 449 208 463 3.18e-35 140
Msa1102800 MtrunA17_Chr1g0207951 27.621 391 220 10 105 470 222 574 3.91e-36 142
Msa1102800 MtrunA17_Chr1g0207951 27.154 383 236 12 105 472 760 1114 8.26e-34 135
Msa1102800 MtrunA17_Chr4g0066281 29.851 335 197 10 157 471 155 471 4.51e-36 139
Msa1102800 MtrunA17_Chr6g0454221 32.883 222 123 5 233 444 4 209 4.53e-36 135
Msa1102800 MtrunA17_Chr8g0377941 38.696 230 116 8 208 433 221 429 8.08e-36 138
Msa1102800 MtrunA17_Chr6g0454211 25.610 410 260 12 55 441 355 742 8.37e-36 141
Msa1102800 MtrunA17_Chr6g0454211 28.218 202 96 5 184 379 78 236 6.53e-15 77.4
Msa1102800 MtrunA17_Chr5g0428081 32.740 281 164 7 207 469 209 482 8.77e-36 138
Msa1102800 MtrunA17_Chr6g0454191 25.630 476 295 13 2 442 6 457 9.00e-36 138
Msa1102800 MtrunA17_Chr5g0419771 28.395 486 291 19 6 455 36 500 1.04e-35 139
Msa1102800 MtrunA17_Chr1g0161351 27.108 498 301 18 6 472 37 503 1.16e-35 138
Msa1102800 MtrunA17_Chr2g0294941 32.075 265 154 7 207 452 109 366 1.26e-35 136
Msa1102800 MtrunA17_Chr5g0431421 25.887 479 297 15 6 466 10 448 1.51e-35 137
Msa1102800 MtrunA17_Chr7g0218311 32.028 281 167 7 206 469 213 486 2.35e-35 137
Msa1102800 MtrunA17_Chr7g0241781 26.087 460 267 15 3 445 6 409 4.62e-35 135
Msa1102800 MtrunA17_Chr6g0454271 33.491 212 125 4 233 444 70 265 4.88e-35 132
Msa1102800 MtrunA17_Chr6g0463851 29.097 299 185 8 190 468 193 484 5.70e-35 136
Msa1102800 MtrunA17_Chr1g0165701 30.343 379 204 15 109 467 146 484 6.25e-35 136
Msa1102800 MtrunA17_Chr6g0454131 27.594 424 257 12 48 444 57 457 6.46e-35 136
Msa1102800 MtrunA17_Chr6g0454141 33.333 210 124 4 233 442 263 456 7.85e-35 135
Msa1102800 MtrunA17_Chr7g0243811 37.917 240 130 7 169 404 153 377 9.86e-35 134
Msa1102800 MtrunA17_Chr3g0098111 31.164 292 170 9 194 472 202 475 1.06e-34 135
Msa1102800 MtrunA17_Chr3g0106231 24.742 485 278 15 5 459 17 444 4.57e-34 133
Msa1102800 MtrunA17_Chr3g0118751 26.141 482 249 18 1 440 1 417 5.72e-34 132
Msa1102800 MtrunA17_Chr8g0367221 33.755 237 142 4 236 468 1521 1746 7.44e-34 135
Msa1102800 MtrunA17_Chr8g0367221 36.413 184 108 1 259 442 1057 1231 1.43e-30 126
Msa1102800 MtrunA17_Chr8g0367221 32.536 209 125 3 259 464 270 465 1.70e-28 119
Msa1102800 MtrunA17_Chr4g0029131 28.982 452 279 16 6 442 12 436 7.51e-34 135
Msa1102800 MtrunA17_Chr5g0393591 25.786 477 284 18 6 468 17 437 8.90e-34 132
Msa1102800 MtrunA17_Chr1g0207931 29.856 278 172 9 204 472 240 503 9.83e-34 133
Msa1102800 MtrunA17_Chr4g0066201 30.961 281 168 10 206 469 206 477 3.24e-33 131
Msa1102800 MtrunA17_Chr2g0307961 25.558 493 298 17 6 466 13 468 6.55e-33 130
Msa1102800 MtrunA17_Chr5g0409591 37.368 190 115 1 254 439 271 460 6.60e-33 130
Msa1102800 MtrunA17_Chr8g0374931 33.469 245 139 6 207 433 211 449 9.10e-33 130
Msa1102800 MtrunA17_Chr6g0482061 27.155 464 290 15 4 437 9 454 1.05e-32 129
Msa1102800 MtrunA17_Chr1g0207831 27.047 403 229 12 94 468 100 465 1.38e-32 129
Msa1102800 MtrunA17_Chr6g0454171 30.894 246 128 8 207 442 73 286 1.72e-32 125
Msa1102800 MtrunA17_Chr8g0336321 28.511 470 288 16 4 451 5 448 1.79e-32 129
Msa1102800 MtrunA17_Chr8g0350881 30.851 282 167 8 207 468 209 482 2.02e-32 129
Msa1102800 MtrunA17_Chr5g0412111 28.351 388 225 14 99 462 99 457 4.32e-32 127
Msa1102800 MtrunA17_Chr8g0365811 31.984 247 145 9 194 430 204 437 6.63e-32 129
Msa1102800 MtrunA17_Chr8g0365811 27.749 382 238 15 105 469 597 957 8.83e-32 129
Msa1102800 MtrunA17_Chr4g0069611 28.289 456 278 17 3 440 12 436 8.62e-32 127
Msa1102800 MtrunA17_Chr2g0294931 30.714 280 169 7 207 468 211 483 1.11e-31 127
Msa1102800 MtrunA17_Chr4g0029151 28.540 459 272 18 6 442 20 444 1.48e-31 126
Msa1102800 MtrunA17_Chr4g0066171 28.929 280 173 10 207 469 209 479 1.54e-31 126
Msa1102800 MtrunA17_Chr8g0336251 28.723 470 287 17 4 451 5 448 1.67e-31 126
Msa1102800 MtrunA17_Chr2g0294921 34.222 225 131 5 256 469 415 633 1.74e-31 127
Msa1102800 MtrunA17_Chr2g0278721 26.974 456 289 15 3 440 12 441 1.96e-31 128
Msa1102800 MtrunA17_Chr2g0278721 27.586 464 286 18 3 442 514 951 3.71e-29 121
Msa1102800 MtrunA17_Chr7g0265111 34.164 281 145 10 207 462 246 511 1.97e-31 127
Msa1102800 MtrunA17_Chr5g0448551 36.047 258 121 11 196 444 203 425 2.85e-31 125
Msa1102800 MtrunA17_Chr5g0432731 30.961 281 163 9 186 458 30 287 7.04e-31 121
Msa1102800 MtrunA17_Chr2g0278741 27.233 459 284 15 3 440 94 523 7.50e-31 125
Msa1102800 MtrunA17_Chr3g0106251 30.566 265 158 4 208 467 52 295 1.41e-30 120
Msa1102800 MtrunA17_Chr1g0196851 28.791 455 279 17 6 442 49 476 3.11e-30 122
Msa1102800 MtrunA17_Chr6g0466841 27.155 464 285 17 2 445 14 444 3.78e-30 122
Msa1102800 MtrunA17_Chr5g0412101 28.653 349 203 12 100 425 106 431 3.95e-30 122
Msa1102800 MtrunA17_Chr5g0410941 29.643 280 172 7 207 468 219 491 4.79e-30 122
Msa1102800 MtrunA17_Chr7g0241801 26.517 445 266 14 3 436 6 400 5.63e-30 121
Msa1102800 MtrunA17_Chr5g0427571 35.211 213 120 5 232 439 72 271 1.08e-29 117
Msa1102800 MtrunA17_Chr5g0412131 29.915 351 195 12 100 425 106 430 2.11e-29 120
Msa1102800 MtrunA17_Chr6g0466831 27.922 462 284 17 2 445 14 444 3.06e-29 119
Msa1102800 MtrunA17_Chr8g0355011 34.171 199 113 6 243 441 157 337 5.48e-29 117
Msa1102800 MtrunA17_Chr6g0454351 24.131 489 266 19 3 442 9 441 2.08e-28 117
Msa1102800 MtrunA17_Chr7g0231631 31.034 290 150 10 201 469 2 262 1.10e-27 111
Msa1102800 MtrunA17_Chr4g0040691 25.323 387 252 10 69 442 73 435 2.22e-27 114
Msa1102800 MtrunA17_Chr5g0416821 31.488 289 139 11 207 469 221 476 3.53e-27 114
Msa1102800 MtrunA17_Chr3g0092031 34.615 182 104 4 260 440 6 173 7.24e-27 107
Msa1102800 MtrunA17_Chr5g0442501 28.707 317 200 14 3 306 2 305 1.36e-26 109
Msa1102800 MtrunA17_Chr5g0431431 25.629 437 227 12 5 433 9 355 3.52e-26 109
Msa1102800 MtrunA17_Chr4g0039881 32.273 220 130 6 231 445 213 418 5.89e-25 107
Msa1102800 MtrunA17_Chr8g0336261 34.868 152 83 4 280 431 1 136 1.23e-24 99.0
Msa1102800 MtrunA17_Chr8g0357361 31.000 200 121 4 207 402 63 249 2.17e-24 102
Msa1102800 MtrunA17_Chr4g0040711 23.773 387 258 10 69 442 73 435 2.49e-24 105
Msa1102800 MtrunA17_Chr6g0464091 33.520 179 104 4 253 430 272 436 5.37e-24 104
Msa1102800 MtrunA17_Chr5g0442551 28.736 261 162 7 95 349 52 294 1.08e-23 100
Msa1102800 MtrunA17_Chr2g0302851 30.417 240 146 7 206 440 214 437 2.48e-23 102
Msa1102800 MtrunA17_Chr6g0454371 32.515 163 94 4 280 442 1 147 2.68e-23 96.7
Msa1102800 MtrunA17_Chr6g0454251 24.228 421 245 14 3 379 4 394 3.59e-23 101
Msa1102800 MtrunA17_Chr2g0283041 29.911 224 140 5 206 428 210 417 1.11e-22 100
Msa1102800 MtrunA17_Chr6g0454231 29.218 243 112 6 206 442 6 194 1.32e-22 100
Msa1102800 MtrunA17_Chr3g0079721 28.667 300 180 10 1 278 1 288 1.22e-21 94.7
Msa1102800 MtrunA17_Chr4g0029161 26.770 452 261 18 6 442 12 408 1.85e-21 96.7
Msa1102800 MtrunA17_Chr8g0339611 43.846 130 68 2 1 127 1 128 3.07e-21 89.4
Msa1102800 MtrunA17_Chr4g0066141 38.843 121 63 2 317 426 191 311 4.17e-21 94.7
Msa1102800 MtrunA17_Chr2g0319761 24.145 468 284 15 6 442 8 435 2.86e-20 93.2
Msa1102800 MtrunA17_Chr6g0469961 37.681 138 81 2 168 300 27 164 6.76e-20 86.7
Msa1102800 MtrunA17_Chr2g0319801 25.974 462 285 17 4 441 6 434 3.79e-18 86.7
Msa1102800 MtrunA17_Chr2g0319731 26.180 466 284 16 7 441 15 451 5.56e-18 86.3
Msa1102800 MtrunA17_Chr2g0319751 25.214 468 277 16 6 441 485 911 2.26e-17 85.5
Msa1102800 MtrunA17_Chr2g0319751 33.333 144 83 4 310 440 269 412 2.28e-13 72.8
Msa1102800 MtrunA17_Chr2g0319791 33.505 194 112 5 254 440 253 436 3.19e-17 84.0
Msa1102800 MtrunA17_Chr2g0321331 33.152 184 95 5 261 442 87 244 1.21e-16 80.1
Msa1102800 MtrunA17_Chr6g0449971 47.561 82 42 1 389 470 1 81 1.47e-16 74.7
Msa1102800 MtrunA17_Chr1g0207881 37.624 101 57 3 333 431 251 347 2.35e-16 80.9
Msa1102800 MtrunA17_Chr7g0243731 38.462 78 48 0 333 410 2 79 3.73e-16 73.2
Msa1102800 MtrunA17_Chr7g0250021 24.348 345 209 13 2 320 8 326 2.28e-15 77.0
Msa1102800 MtrunA17_Chr6g0454391 43.939 66 33 1 356 421 13 74 1.49e-12 64.3
Msa1102800 MtrunA17_Chr7g0243721 35.374 147 72 6 166 303 3 135 5.24e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1102800 AT4G01070.1 47.629 464 238 5 2 463 4 464 2.14e-153 445
Msa1102800 AT1G01390.1 49.220 449 224 4 2 448 4 450 1.00e-146 428
Msa1102800 AT1G01390.2 49.220 449 224 4 2 448 21 467 1.46e-146 428
Msa1102800 AT1G01420.1 46.121 464 244 6 2 463 4 463 2.95e-145 424
Msa1102800 AT1G01420.2 46.121 464 244 6 2 463 7 466 4.05e-145 424
Msa1102800 AT4G01070.2 46.398 347 180 5 2 346 4 346 1.05e-99 303
Msa1102800 AT5G66690.1 37.634 465 255 13 6 453 7 453 8.89e-98 303
Msa1102800 AT3G50740.1 37.029 478 279 12 6 469 7 476 3.10e-97 301
Msa1102800 AT5G26310.1 37.419 465 260 11 6 455 7 455 6.21e-94 293
Msa1102800 AT2G18570.1 34.249 473 286 14 6 465 5 465 1.31e-89 281
Msa1102800 AT4G36770.1 37.155 471 244 17 6 450 4 448 9.46e-84 266
Msa1102800 AT3G16520.1 32.088 455 292 7 7 455 6 449 3.65e-79 253
Msa1102800 AT3G16520.3 32.035 462 296 8 7 462 6 455 6.70e-79 253
Msa1102800 AT3G16520.2 32.143 448 287 7 7 448 6 442 1.95e-78 251
Msa1102800 AT2G18560.1 37.006 354 208 7 95 441 7 352 7.79e-76 243
Msa1102800 AT1G07260.1 30.847 496 296 16 1 471 1 474 4.89e-66 220
Msa1102800 AT2G29750.1 31.224 490 290 17 3 466 5 473 8.50e-63 211
Msa1102800 AT3G21750.1 34.105 475 267 16 6 455 4 457 1.82e-62 211
Msa1102800 AT1G07250.1 31.429 490 297 16 1 467 1 474 4.68e-62 209
Msa1102800 AT2G29740.1 32.308 455 267 15 1 429 1 440 4.99e-62 209
Msa1102800 AT4G15280.1 31.535 482 274 18 6 455 4 461 2.53e-60 205
Msa1102800 AT4G15280.2 31.535 482 274 18 6 455 36 493 5.01e-60 205
Msa1102800 AT3G21800.1 31.056 483 282 18 13 465 12 473 7.24e-60 204
Msa1102800 AT3G21790.1 29.400 483 292 15 7 458 5 469 4.66e-55 191
Msa1102800 AT2G29730.1 28.423 482 292 16 3 459 2 455 2.37e-54 189
Msa1102800 AT3G21760.1 31.020 490 283 18 7 463 5 472 1.43e-53 187
Msa1102800 AT2G16890.2 31.020 490 288 15 4 468 5 469 4.34e-53 186
Msa1102800 AT3G21780.1 30.894 492 265 18 6 458 4 459 7.13e-53 185
Msa1102800 AT2G30140.2 30.882 476 276 16 6 466 13 450 2.94e-52 183
Msa1102800 AT1G07240.1 29.158 487 286 16 3 455 2 463 3.13e-52 183
Msa1102800 AT2G15490.1 33.676 389 230 10 92 466 106 480 3.57e-52 183
Msa1102800 AT2G30140.1 30.818 477 276 16 6 466 13 451 3.85e-52 182
Msa1102800 AT4G15260.1 33.426 359 207 11 117 458 2 345 1.82e-51 178
Msa1102800 AT2G15490.3 33.676 389 227 11 92 466 106 477 4.88e-51 180
Msa1102800 AT2G29710.1 29.730 481 287 18 3 459 2 455 2.85e-50 178
Msa1102800 AT1G22400.1 28.458 506 280 17 6 466 13 481 9.10e-50 177
Msa1102800 AT5G03490.1 29.569 487 288 16 2 469 15 465 4.56e-49 174
Msa1102800 AT1G22380.1 28.921 491 276 18 6 456 13 470 7.64e-49 174
Msa1102800 AT1G22340.1 27.846 492 301 16 2 462 9 477 5.42e-48 172
Msa1102800 AT5G14860.1 28.189 486 288 13 17 468 19 477 6.19e-48 172
Msa1102800 AT2G15480.1 32.481 391 229 11 92 466 109 480 6.97e-48 172
Msa1102800 AT1G05680.1 29.400 483 293 12 1 466 1 452 1.25e-47 171
Msa1102800 AT2G31750.1 28.986 483 287 15 5 466 7 454 4.75e-47 169
Msa1102800 AT1G22360.1 27.366 486 298 14 1 455 5 466 5.84e-47 169
Msa1102800 AT2G15480.2 32.754 403 222 12 92 466 109 490 6.88e-47 169
Msa1102800 AT2G31790.1 29.607 483 292 14 2 466 4 456 1.12e-46 168
Msa1102800 AT2G31750.2 28.866 485 289 15 5 468 7 456 1.26e-46 169
Msa1102800 AT1G05675.1 28.337 487 293 12 1 466 1 452 2.31e-46 167
Msa1102800 AT5G59590.1 27.044 477 301 14 3 466 7 449 3.65e-46 166
Msa1102800 AT2G16890.3 30.909 440 254 15 4 418 5 419 5.86e-46 165
Msa1102800 AT2G30150.2 29.630 486 277 15 6 469 13 455 1.08e-45 165
Msa1102800 AT1G10400.1 29.218 486 291 17 5 466 6 462 2.86e-45 164
Msa1102800 AT2G36780.1 36.577 298 159 8 183 462 199 484 3.94e-45 165
Msa1102800 AT2G30150.1 29.854 479 271 15 13 469 4 439 1.25e-44 162
Msa1102800 AT1G78270.1 27.743 483 290 14 6 455 13 469 3.47e-44 162
Msa1102800 AT2G36770.1 36.111 288 157 8 192 462 207 484 1.75e-43 160
Msa1102800 AT4G34131.1 30.811 370 222 10 112 466 129 479 3.09e-43 159
Msa1102800 AT2G43820.1 29.150 494 271 19 3 467 4 447 3.23e-43 158
Msa1102800 AT1G22370.2 30.185 487 268 17 6 455 13 464 4.21e-43 159
Msa1102800 AT2G36760.1 36.426 291 156 9 182 455 198 476 5.93e-43 159
Msa1102800 AT1G22360.2 26.955 486 288 14 1 455 5 454 6.01e-43 158
Msa1102800 AT1G51210.1 29.451 455 259 16 6 440 20 432 6.36e-43 157
Msa1102800 AT5G59580.1 27.292 469 305 13 6 467 9 448 6.46e-43 158
Msa1102800 AT3G11340.1 28.954 411 254 11 71 462 49 440 1.39e-42 157
Msa1102800 AT4G34138.1 36.296 270 148 7 207 466 223 478 1.43e-42 157
Msa1102800 AT5G12890.1 29.563 504 288 21 2 465 4 480 3.52e-42 156
Msa1102800 AT4G34135.1 33.030 330 191 8 112 427 130 443 6.77e-42 155
Msa1102800 AT1G73880.1 26.946 501 288 19 5 470 13 470 8.43e-42 155
Msa1102800 AT5G05880.1 30.854 363 223 12 106 462 104 444 1.07e-41 154
Msa1102800 AT2G43840.2 28.484 488 276 15 6 467 7 447 1.57e-41 154
Msa1102800 AT2G28080.1 31.268 339 195 10 111 427 129 451 1.67e-41 154
Msa1102800 AT3G46650.1 27.371 464 286 15 1 458 5 423 1.77e-41 153
Msa1102800 AT5G17050.1 26.569 478 286 12 3 455 9 446 2.37e-41 154
Msa1102800 AT3G46680.1 27.637 474 303 17 1 464 4 447 3.31e-41 153
Msa1102800 AT2G36970.1 27.697 343 223 7 108 442 122 447 4.88e-41 153
Msa1102800 AT2G36800.1 36.496 274 144 8 207 462 222 483 1.09e-40 152
Msa1102800 AT2G43840.1 28.310 491 273 16 6 467 7 447 2.01e-40 151
Msa1102800 AT2G36750.1 36.029 272 148 7 207 462 218 479 3.88e-40 151
Msa1102800 AT3G53160.1 37.226 274 142 9 207 462 217 478 3.94e-40 151
Msa1102800 AT3G53150.1 27.573 515 292 19 2 462 18 505 6.87e-40 150
Msa1102800 AT3G55700.1 33.115 305 182 10 163 466 167 450 9.14e-40 149
Msa1102800 AT3G46690.1 27.646 463 303 13 6 462 9 445 9.59e-40 149
Msa1102800 AT1G24100.1 26.884 491 305 14 1 468 1 460 1.94e-39 148
Msa1102800 AT3G46670.1 25.934 482 300 14 6 469 9 451 2.34e-39 148
Msa1102800 AT3G02100.1 27.254 488 289 18 6 467 13 460 2.56e-39 148
Msa1102800 AT3G46700.1 34.351 262 154 6 207 467 201 445 3.58e-39 147
Msa1102800 AT1G30530.1 25.210 476 316 12 3 469 9 453 2.67e-38 145
Msa1102800 AT5G05900.1 35.593 295 156 11 174 462 177 443 3.17e-38 145
Msa1102800 AT5G05860.1 37.131 237 133 6 231 466 226 447 5.02e-37 141
Msa1102800 AT2G23260.1 25.678 479 297 18 2 459 6 446 5.57e-37 141
Msa1102800 AT1G22370.1 32.721 272 153 7 195 455 42 294 2.59e-36 136
Msa1102800 AT3G46660.1 35.714 224 128 5 232 455 236 443 4.25e-36 139
Msa1102800 AT4G14090.1 27.115 461 280 16 6 448 13 435 1.07e-35 138
Msa1102800 AT4G15480.1 29.688 384 227 15 105 471 123 480 2.09e-35 137
Msa1102800 AT5G17030.1 25.407 492 302 14 3 470 9 459 2.93e-35 137
Msa1102800 AT5G05870.1 34.167 240 141 5 232 469 233 457 4.32e-35 136
Msa1102800 AT3G46720.1 33.610 241 138 4 227 467 223 441 8.41e-35 135
Msa1102800 AT5G05890.1 29.179 329 210 9 139 462 138 448 1.61e-34 134
Msa1102800 AT2G36790.1 36.131 274 145 8 207 462 222 483 1.91e-34 135
Msa1102800 AT5G38010.1 29.268 369 224 12 109 466 111 453 2.75e-34 134
Msa1102800 AT5G38040.1 28.355 462 286 17 17 466 21 449 3.14e-34 134
Msa1102800 AT5G17040.1 26.230 488 288 15 5 469 4 442 1.70e-33 131
Msa1102800 AT1G05560.2 36.607 224 127 7 208 426 250 463 2.51e-33 132
Msa1102800 AT1G05560.1 35.178 253 147 9 208 455 200 440 2.89e-33 131
Msa1102800 AT3G55710.1 31.208 298 183 9 174 466 174 454 2.93e-33 131
Msa1102800 AT4G15500.1 25.107 466 285 13 6 442 9 439 5.25e-33 130
Msa1102800 AT4G15490.1 29.839 372 212 16 105 455 111 454 2.20e-32 129
Msa1102800 AT2G26480.1 31.008 258 160 5 207 462 200 441 4.23e-32 128
Msa1102800 AT4G15550.1 25.934 482 304 15 6 462 13 466 1.59e-31 126
Msa1102800 AT1G06000.1 32.353 306 189 10 167 466 140 433 2.91e-31 125
Msa1102800 AT5G65550.1 32.114 246 150 6 208 452 220 449 8.18e-30 121
Msa1102800 AT2G23250.1 27.139 339 212 11 138 466 122 435 1.17e-29 120
Msa1102800 AT1G05530.1 33.333 228 136 5 208 428 200 418 1.19e-29 121
Msa1102800 AT3G21560.1 25.124 402 260 14 85 471 99 474 1.45e-29 121
Msa1102800 AT5G17040.2 27.003 337 208 9 143 469 32 340 1.65e-29 118
Msa1102800 AT5G49690.1 35.714 210 113 5 235 440 242 433 4.88e-29 119
Msa1102800 AT5G37950.2 31.095 283 157 11 109 380 83 338 1.12e-27 113
Msa1102800 AT3G22250.1 32.407 216 112 8 237 442 247 438 6.76e-27 113
Msa1102800 AT5G37950.1 31.095 283 163 9 109 380 83 344 9.93e-27 110
Msa1102800 AT1G64910.1 32.627 236 143 5 192 426 180 400 2.56e-25 108
Msa1102800 AT2G22590.1 32.105 190 114 3 255 441 269 446 3.89e-25 108
Msa1102800 AT4G27570.1 34.021 194 116 3 254 445 244 427 2.37e-23 102
Msa1102800 AT5G54010.1 34.524 168 100 2 259 426 249 406 4.75e-22 99.0
Msa1102800 AT4G27560.1 34.104 173 104 2 254 426 244 406 1.32e-21 97.4
Msa1102800 AT5G53990.1 34.320 169 101 2 260 428 244 402 1.56e-21 97.4
Msa1102800 AT1G50580.1 24.183 459 297 14 1 445 1 422 2.39e-20 93.6
Msa1102800 AT1G64920.1 31.959 194 112 5 260 445 244 425 3.55e-19 90.1
Msa1102800 AT3G29630.2 32.105 190 112 5 260 444 220 397 8.06e-19 89.0
Msa1102800 AT3G29630.1 32.105 190 112 5 260 444 246 423 1.14e-18 88.6
Msa1102800 AT2G22930.1 29.255 188 121 3 260 445 244 421 2.38e-18 87.8
Msa1102800 AT4G09500.2 29.282 181 116 2 267 445 251 421 2.67e-17 84.3
Msa1102800 AT4G09500.1 29.282 181 116 2 267 445 226 396 2.78e-17 84.3
Msa1102800 AT5G54060.1 30.151 199 123 5 259 453 267 453 1.69e-16 82.0
Msa1102800 AT4G34135.2 31.188 202 127 6 112 305 130 327 1.78e-12 68.9

Find 84 sgRNAs with CRISPR-Local

Find 214 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAAAGATTGGTGGGATTT+AGG 0.210478 7_3:+36886215 Msa1102800:CDS
AGACAAAGAATTGAATTCTT+TGG 0.225165 7_3:-36885191 None:intergenic
ACACATCCTGGTAACTTTAT+AGG 0.232228 7_3:-36885313 None:intergenic
GTGGGACCCATTACACAAAT+AGG 0.239147 7_3:+36885526 Msa1102800:CDS
TTGGAAAGAACCAAAGAAAA+AGG 0.272917 7_3:+36885808 Msa1102800:CDS
CTTGACCCTATTTGTGTAAT+GGG 0.274064 7_3:-36885532 None:intergenic
ATGCAAGTGACATGAAAATT+TGG 0.279288 7_3:-36884914 None:intergenic
ATGATTTGTGACTAATCTTT+TGG 0.279385 7_3:-36884891 None:intergenic
GTGTAACTGTGAGTTGAATT+AGG 0.301591 7_3:-36885066 None:intergenic
GAAACCTCTTCATCAAGTTT+TGG 0.313198 7_3:-36885265 None:intergenic
ATTGCTTGTTCGGCAAATAA+TGG 0.330976 7_3:-36885961 None:intergenic
GTGAGTTGAATTAGGATTCC+TGG 0.343258 7_3:-36885058 None:intergenic
GAATGAACTAGCATTTGGTT+TGG 0.366577 7_3:+36885672 Msa1102800:CDS
CAAATGAATGAACTAGCATT+TGG 0.371179 7_3:+36885667 Msa1102800:CDS
GGTAAGTCTTGTTTGTTGAT+TGG 0.374729 7_3:-36885022 None:intergenic
AAAACTAAGTTTATGTTTGG+TGG 0.393290 7_3:-36884992 None:intergenic
TATAAAAGCATTGGAACAAA+AGG 0.401193 7_3:+36885477 Msa1102800:CDS
TGAGTGGTCAAAGATTCATT+TGG 0.413025 7_3:+36885698 Msa1102800:CDS
ATGGTCTTAAAGTGGCTTTA+AGG 0.413506 7_3:+36886004 Msa1102800:CDS
AACAGCATTCATTGCTTGTT+CGG 0.413693 7_3:-36885971 None:intergenic
GAGTGGTCAAAGATTCATTT+GGG 0.415417 7_3:+36885699 Msa1102800:CDS
GCTACTCAGTTGGAAAAGAT+TGG 0.421036 7_3:+36886204 Msa1102800:CDS
ACTTGCATCATTCCCTCACT+TGG 0.426590 7_3:+36884929 Msa1102800:CDS
ACTTGACCCTATTTGTGTAA+TGG 0.427102 7_3:-36885533 None:intergenic
ATGAACTTGAATGTTTGAAA+TGG 0.452265 7_3:+36885575 Msa1102800:CDS
AATAATGGCCAAGCTACTAT+TGG 0.457994 7_3:-36885946 None:intergenic
TTCACACTTGGCTACTCAGT+TGG 0.459312 7_3:+36886194 Msa1102800:CDS
ATCAAGTGCTATAAAAGCAT+TGG 0.465790 7_3:+36885468 Msa1102800:CDS
TGGGACCCATTACACAAATA+GGG 0.471912 7_3:+36885527 Msa1102800:CDS
TTGTGGTTGGAATTCAACTT+TGG 0.474884 7_3:+36885903 Msa1102800:CDS
TGTTTGGTGGAATTGTTTCA+AGG 0.480591 7_3:-36884979 None:intergenic
TGAAGATCAATACCATTGAT+TGG 0.481728 7_3:-36885337 None:intergenic
TCAGCAATTATAGCAACTAA+AGG 0.482289 7_3:-36885139 None:intergenic
CCATTGATTGGTACACATCC+TGG 0.483128 7_3:-36885325 None:intergenic
CTAAAGCAAAATTCAGTTGG+TGG 0.483507 7_3:+36885868 Msa1102800:CDS
TTGAGAGCTTCATGAATTGA+TGG 0.484255 7_3:-36885097 None:intergenic
AATTGCTGATAAATTTGCAT+TGG 0.486451 7_3:+36885153 Msa1102800:CDS
ATGTATCTTGAACGTGCTAA+AGG 0.489880 7_3:+36885397 Msa1102800:CDS
AGATGATGAAATTGTGGAAA+AGG 0.492117 7_3:+36886038 Msa1102800:CDS
TTTAAGAGAATGTGTTGCTA+TGG 0.495761 7_3:+36886134 Msa1102800:CDS
TGCTTTAGTATTTCAACTTG+AGG 0.497268 7_3:-36885853 None:intergenic
ATTTGAAGATGATGAAATTG+TGG 0.503860 7_3:+36886032 Msa1102800:CDS
ATAGCTGTTATTTCAAGCCC+TGG 0.511106 7_3:+36884836 Msa1102800:CDS
GGGGCTATGTGGCTGAAACC+AGG 0.513712 7_3:-36884854 None:intergenic
ACAGTAACAAAAGATAGATC+AGG 0.513854 7_3:+36885361 Msa1102800:CDS
CCAGGATGTGTACCAATCAA+TGG 0.514854 7_3:+36885325 Msa1102800:CDS
TGTGTGATGGAAGGGGAAGA+AGG 0.517535 7_3:+36886084 Msa1102800:CDS
TGAGTTGAATTAGGATTCCT+GGG 0.519273 7_3:-36885057 None:intergenic
TCAACTTGAGGTGCCCATGA+TGG 0.519687 7_3:-36885841 None:intergenic
AATACAAACTATTTCACACT+TGG 0.521278 7_3:+36886182 Msa1102800:CDS
ATACTAAAGCAAAATTCAGT+TGG 0.529329 7_3:+36885865 Msa1102800:CDS
TTTGGAGAATTCTACTATTG+GGG 0.537773 7_3:-36884873 None:intergenic
TTGGCCAAAACTTGATGAAG+AGG 0.539482 7_3:+36885261 Msa1102800:CDS
AAGTCTTGTTTGTTGATTGG+TGG 0.544881 7_3:-36885019 None:intergenic
CTCAGTTGGAAAAGATTGGT+GGG 0.546993 7_3:+36886208 Msa1102800:CDS
GAAAGAACAAAAGCTGAACA+AGG 0.548434 7_3:-36885226 None:intergenic
ATAAAAGCATTGGAACAAAA+GGG 0.548616 7_3:+36885478 Msa1102800:CDS
GGGCTATGTGGCTGAAACCA+GGG 0.550402 7_3:-36884853 None:intergenic
AAAGATGATTAAGTGTGTGA+TGG 0.554553 7_3:+36886071 Msa1102800:CDS
TAGCACTTGATTCTAATGCA+AGG 0.562449 7_3:-36885456 None:intergenic
CAAGAACCTATAAAGTTACC+AGG 0.568874 7_3:+36885307 Msa1102800:CDS
TCAAGTAACAATGATGTTGT+TGG 0.571362 7_3:+36885550 Msa1102800:CDS
GCATTGGAACAAAAGGGTGA+TGG 0.574375 7_3:+36885484 Msa1102800:CDS
GTTATGTGATGGTCTTAAAG+TGG 0.579133 7_3:+36885996 Msa1102800:CDS
ATCTGGTAATGAACCAAGTG+AGG 0.579195 7_3:-36884942 None:intergenic
ATGATTAAGTGTGTGATGGA+AGG 0.584625 7_3:+36886075 Msa1102800:CDS
TGATTAAGTGTGTGATGGAA+GGG 0.587144 7_3:+36886076 Msa1102800:CDS
ACTCAGTTGGAAAAGATTGG+TGG 0.587320 7_3:+36886207 Msa1102800:CDS
AACTTTGGAAAGTATACAAG+AGG 0.590085 7_3:+36885918 Msa1102800:CDS
GATTAAGTGTGTGATGGAAG+GGG 0.592863 7_3:+36886077 Msa1102800:CDS
ATTCTACTATTGGGGCTATG+TGG 0.593266 7_3:-36884865 None:intergenic
ATTTGTGTAATGGGTCCCAC+AGG 0.598751 7_3:-36885523 None:intergenic
ATGGCATTGAAAGTCAAAGA+TGG 0.602420 7_3:+36886153 Msa1102800:CDS
GCATTTGGTTTGGAATTGAG+TGG 0.602663 7_3:+36885682 Msa1102800:CDS
AACAAACAAGACTTACCTCA+AGG 0.611556 7_3:+36885028 Msa1102800:CDS
ACTTTGGAAAGTATACAAGA+GGG 0.613255 7_3:+36885919 Msa1102800:CDS
AAAGAACAAAAGCTGAACAA+GGG 0.625122 7_3:-36885225 None:intergenic
ATTCCTGGGTATACTCCTTG+AGG 0.640775 7_3:-36885043 None:intergenic
TCTGGTAATGAACCAAGTGA+GGG 0.647425 7_3:-36884941 None:intergenic
TTTGGAAAGTATACAAGAGG+GGG 0.657847 7_3:+36885921 Msa1102800:CDS
GCAGCACTAACTGAATCACT+TGG 0.660110 7_3:-36885733 None:intergenic
AATGCTGTTATGTTATGTGA+TGG 0.661412 7_3:+36885985 Msa1102800:CDS
CTTTGGAAAGTATACAAGAG+GGG 0.668198 7_3:+36885920 Msa1102800:CDS
TTACCTCAAGGAGTATACCC+AGG 0.698158 7_3:+36885040 Msa1102800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCTTTCTTTTTATTTACAT+TGG + chr7_3:36885242-36885261 Msa1102800:CDS 15.0%
!!! TTCTTTCTTTTTATTTACAT+TGG + chr7_3:36885242-36885261 Msa1102800:CDS 15.0%
!! AGAAAAACTAAGTTTATGTT+TGG - chr7_3:36884998-36885017 None:intergenic 20.0%
!! AGAAAAACTAAGTTTATGTT+TGG - chr7_3:36884998-36885017 None:intergenic 20.0%
!!! TTTTGGAGAATTCTACTATT+GGG - chr7_3:36884877-36884896 None:intergenic 25.0%
!!! ATGATTTGTGACTAATCTTT+TGG - chr7_3:36884894-36884913 None:intergenic 25.0%
! AAAACTAAGTTTATGTTTGG+TGG - chr7_3:36884995-36885014 None:intergenic 25.0%
! AATTGCTGATAAATTTGCAT+TGG + chr7_3:36885153-36885172 Msa1102800:CDS 25.0%
! AGACAAAGAATTGAATTCTT+TGG - chr7_3:36885194-36885213 None:intergenic 25.0%
!!! AAAGGTATGTATTTTGTTGA+TGG + chr7_3:36885415-36885434 Msa1102800:CDS 25.0%
!!! TATAAAAGCATTGGAACAAA+AGG + chr7_3:36885477-36885496 Msa1102800:CDS 25.0%
!!! ATAAAAGCATTGGAACAAAA+GGG + chr7_3:36885478-36885497 Msa1102800:CDS 25.0%
!!! AAAAATCAGTTTTTTTCCTG+TGG + chr7_3:36885507-36885526 Msa1102800:CDS 25.0%
!!! AAAATCAGTTTTTTTCCTGT+GGG + chr7_3:36885508-36885527 Msa1102800:CDS 25.0%
! ATGAACTTGAATGTTTGAAA+TGG + chr7_3:36885575-36885594 Msa1102800:CDS 25.0%
!! ACATACAAAACAGAATTTTG+TGG - chr7_3:36885613-36885632 None:intergenic 25.0%
!! TCTGTTTTGTATGTTTCTTT+TGG + chr7_3:36885619-36885638 Msa1102800:CDS 25.0%
!! CACTGAAATTTTTACCTAAA+GGG + chr7_3:36885782-36885801 Msa1102800:CDS 25.0%
!! ATTTTTACCTAAAGGGTTTT+TGG + chr7_3:36885789-36885808 Msa1102800:CDS 25.0%
!! CAAAATCAAACCTTTTTCTT+TGG - chr7_3:36885821-36885840 None:intergenic 25.0%
! ATACTAAAGCAAAATTCAGT+TGG + chr7_3:36885865-36885884 Msa1102800:CDS 25.0%
! ATTTGAAGATGATGAAATTG+TGG + chr7_3:36886032-36886051 Msa1102800:CDS 25.0%
! AATACAAACTATTTCACACT+TGG + chr7_3:36886182-36886201 Msa1102800:CDS 25.0%
!!! TTTTGGAGAATTCTACTATT+GGG - chr7_3:36884877-36884896 None:intergenic 25.0%
!!! ATGATTTGTGACTAATCTTT+TGG - chr7_3:36884894-36884913 None:intergenic 25.0%
! AAAACTAAGTTTATGTTTGG+TGG - chr7_3:36884995-36885014 None:intergenic 25.0%
! AATTGCTGATAAATTTGCAT+TGG + chr7_3:36885153-36885172 Msa1102800:CDS 25.0%
! AGACAAAGAATTGAATTCTT+TGG - chr7_3:36885194-36885213 None:intergenic 25.0%
!!! AAAGGTATGTATTTTGTTGA+TGG + chr7_3:36885415-36885434 Msa1102800:CDS 25.0%
!!! TATAAAAGCATTGGAACAAA+AGG + chr7_3:36885477-36885496 Msa1102800:CDS 25.0%
!!! ATAAAAGCATTGGAACAAAA+GGG + chr7_3:36885478-36885497 Msa1102800:CDS 25.0%
!!! AAAAATCAGTTTTTTTCCTG+TGG + chr7_3:36885507-36885526 Msa1102800:CDS 25.0%
!!! AAAATCAGTTTTTTTCCTGT+GGG + chr7_3:36885508-36885527 Msa1102800:CDS 25.0%
! ATGAACTTGAATGTTTGAAA+TGG + chr7_3:36885575-36885594 Msa1102800:CDS 25.0%
!! ACATACAAAACAGAATTTTG+TGG - chr7_3:36885613-36885632 None:intergenic 25.0%
!! TCTGTTTTGTATGTTTCTTT+TGG + chr7_3:36885619-36885638 Msa1102800:CDS 25.0%
!! CACTGAAATTTTTACCTAAA+GGG + chr7_3:36885782-36885801 Msa1102800:CDS 25.0%
!! ATTTTTACCTAAAGGGTTTT+TGG + chr7_3:36885789-36885808 Msa1102800:CDS 25.0%
!! CAAAATCAAACCTTTTTCTT+TGG - chr7_3:36885821-36885840 None:intergenic 25.0%
! ATACTAAAGCAAAATTCAGT+TGG + chr7_3:36885865-36885884 Msa1102800:CDS 25.0%
! ATTTGAAGATGATGAAATTG+TGG + chr7_3:36886032-36886051 Msa1102800:CDS 25.0%
! AATACAAACTATTTCACACT+TGG + chr7_3:36886182-36886201 Msa1102800:CDS 25.0%
TTTGGAGAATTCTACTATTG+GGG - chr7_3:36884876-36884895 None:intergenic 30.0%
!! CTTTTGGAGAATTCTACTAT+TGG - chr7_3:36884878-36884897 None:intergenic 30.0%
ATGCAAGTGACATGAAAATT+TGG - chr7_3:36884917-36884936 None:intergenic 30.0%
!! AGGTATGATTTTGATGAATC+TGG - chr7_3:36884962-36884981 None:intergenic 30.0%
TCAGCAATTATAGCAACTAA+AGG - chr7_3:36885142-36885161 None:intergenic 30.0%
AAAGAACAAAAGCTGAACAA+GGG - chr7_3:36885228-36885247 None:intergenic 30.0%
TGAAGATCAATACCATTGAT+TGG - chr7_3:36885340-36885359 None:intergenic 30.0%
ACAGTAACAAAAGATAGATC+AGG + chr7_3:36885361-36885380 Msa1102800:CDS 30.0%
! ATCAAGTGCTATAAAAGCAT+TGG + chr7_3:36885468-36885487 Msa1102800:CDS 30.0%
TCAAGTAACAATGATGTTGT+TGG + chr7_3:36885550-36885569 Msa1102800:CDS 30.0%
! ACAAAACAGAATTTTGTGGT+TGG - chr7_3:36885609-36885628 None:intergenic 30.0%
!! TTGTATGTTTCTTTTGGAAG+TGG + chr7_3:36885625-36885644 Msa1102800:CDS 30.0%
CAAATGAATGAACTAGCATT+TGG + chr7_3:36885667-36885686 Msa1102800:CDS 30.0%
CCTTTAGGTAAAAATTTCAG+TGG - chr7_3:36885784-36885803 None:intergenic 30.0%
! CCACTGAAATTTTTACCTAA+AGG + chr7_3:36885781-36885800 Msa1102800:CDS 30.0%
TTGGAAAGAACCAAAGAAAA+AGG + chr7_3:36885808-36885827 Msa1102800:CDS 30.0%
TGCTTTAGTATTTCAACTTG+AGG - chr7_3:36885856-36885875 None:intergenic 30.0%
!!! GATTTTTAAGTCATTGTGGT+TGG + chr7_3:36885890-36885909 Msa1102800:CDS 30.0%
! AACTTTGGAAAGTATACAAG+AGG + chr7_3:36885918-36885937 Msa1102800:CDS 30.0%
! ACTTTGGAAAGTATACAAGA+GGG + chr7_3:36885919-36885938 Msa1102800:CDS 30.0%
AATGCTGTTATGTTATGTGA+TGG + chr7_3:36885985-36886004 Msa1102800:CDS 30.0%
AGATGATGAAATTGTGGAAA+AGG + chr7_3:36886038-36886057 Msa1102800:CDS 30.0%
AAAGATGATTAAGTGTGTGA+TGG + chr7_3:36886071-36886090 Msa1102800:CDS 30.0%
! TTTAAGAGAATGTGTTGCTA+TGG + chr7_3:36886134-36886153 Msa1102800:CDS 30.0%
TTTGGAGAATTCTACTATTG+GGG - chr7_3:36884876-36884895 None:intergenic 30.0%
!! CTTTTGGAGAATTCTACTAT+TGG - chr7_3:36884878-36884897 None:intergenic 30.0%
ATGCAAGTGACATGAAAATT+TGG - chr7_3:36884917-36884936 None:intergenic 30.0%
!! AGGTATGATTTTGATGAATC+TGG - chr7_3:36884962-36884981 None:intergenic 30.0%
TCAGCAATTATAGCAACTAA+AGG - chr7_3:36885142-36885161 None:intergenic 30.0%
AAAGAACAAAAGCTGAACAA+GGG - chr7_3:36885228-36885247 None:intergenic 30.0%
TGAAGATCAATACCATTGAT+TGG - chr7_3:36885340-36885359 None:intergenic 30.0%
ACAGTAACAAAAGATAGATC+AGG + chr7_3:36885361-36885380 Msa1102800:CDS 30.0%
! ATCAAGTGCTATAAAAGCAT+TGG + chr7_3:36885468-36885487 Msa1102800:CDS 30.0%
TCAAGTAACAATGATGTTGT+TGG + chr7_3:36885550-36885569 Msa1102800:CDS 30.0%
! ACAAAACAGAATTTTGTGGT+TGG - chr7_3:36885609-36885628 None:intergenic 30.0%
!! TTGTATGTTTCTTTTGGAAG+TGG + chr7_3:36885625-36885644 Msa1102800:CDS 30.0%
CAAATGAATGAACTAGCATT+TGG + chr7_3:36885667-36885686 Msa1102800:CDS 30.0%
CCTTTAGGTAAAAATTTCAG+TGG - chr7_3:36885784-36885803 None:intergenic 30.0%
! CCACTGAAATTTTTACCTAA+AGG + chr7_3:36885781-36885800 Msa1102800:CDS 30.0%
TTGGAAAGAACCAAAGAAAA+AGG + chr7_3:36885808-36885827 Msa1102800:CDS 30.0%
TGCTTTAGTATTTCAACTTG+AGG - chr7_3:36885856-36885875 None:intergenic 30.0%
!!! GATTTTTAAGTCATTGTGGT+TGG + chr7_3:36885890-36885909 Msa1102800:CDS 30.0%
! AACTTTGGAAAGTATACAAG+AGG + chr7_3:36885918-36885937 Msa1102800:CDS 30.0%
! ACTTTGGAAAGTATACAAGA+GGG + chr7_3:36885919-36885938 Msa1102800:CDS 30.0%
AATGCTGTTATGTTATGTGA+TGG + chr7_3:36885985-36886004 Msa1102800:CDS 30.0%
AGATGATGAAATTGTGGAAA+AGG + chr7_3:36886038-36886057 Msa1102800:CDS 30.0%
AAAGATGATTAAGTGTGTGA+TGG + chr7_3:36886071-36886090 Msa1102800:CDS 30.0%
! TTTAAGAGAATGTGTTGCTA+TGG + chr7_3:36886134-36886153 Msa1102800:CDS 30.0%
! TGTTTGGTGGAATTGTTTCA+AGG - chr7_3:36884982-36885001 None:intergenic 35.0%
!! AAGTCTTGTTTGTTGATTGG+TGG - chr7_3:36885022-36885041 None:intergenic 35.0%
!! GGTAAGTCTTGTTTGTTGAT+TGG - chr7_3:36885025-36885044 None:intergenic 35.0%
AACAAACAAGACTTACCTCA+AGG + chr7_3:36885028-36885047 Msa1102800:CDS 35.0%
! TGAGTTGAATTAGGATTCCT+GGG - chr7_3:36885060-36885079 None:intergenic 35.0%
! GTGTAACTGTGAGTTGAATT+AGG - chr7_3:36885069-36885088 None:intergenic 35.0%
TTGAGAGCTTCATGAATTGA+TGG - chr7_3:36885100-36885119 None:intergenic 35.0%
GAAAGAACAAAAGCTGAACA+AGG - chr7_3:36885229-36885248 None:intergenic 35.0%
! GAAACCTCTTCATCAAGTTT+TGG - chr7_3:36885268-36885287 None:intergenic 35.0%
CAAGAACCTATAAAGTTACC+AGG + chr7_3:36885307-36885326 Msa1102800:CDS 35.0%
ACACATCCTGGTAACTTTAT+AGG - chr7_3:36885316-36885335 None:intergenic 35.0%
ATGTATCTTGAACGTGCTAA+AGG + chr7_3:36885397-36885416 Msa1102800:CDS 35.0%
TAGCACTTGATTCTAATGCA+AGG - chr7_3:36885459-36885478 None:intergenic 35.0%
CTTGACCCTATTTGTGTAAT+GGG - chr7_3:36885535-36885554 None:intergenic 35.0%
ACTTGACCCTATTTGTGTAA+TGG - chr7_3:36885536-36885555 None:intergenic 35.0%
!! TATGTTTCTTTTGGAAGTGG+TGG + chr7_3:36885628-36885647 Msa1102800:CDS 35.0%
GAATGAACTAGCATTTGGTT+TGG + chr7_3:36885672-36885691 Msa1102800:CDS 35.0%
TGAGTGGTCAAAGATTCATT+TGG + chr7_3:36885698-36885717 Msa1102800:CDS 35.0%
GAGTGGTCAAAGATTCATTT+GGG + chr7_3:36885699-36885718 Msa1102800:CDS 35.0%
GTTCTTTCCAAAAACCCTTT+AGG - chr7_3:36885799-36885818 None:intergenic 35.0%
!! AAGGTTTGATTTTGCCATCA+TGG + chr7_3:36885827-36885846 Msa1102800:CDS 35.0%
!! AGGTTTGATTTTGCCATCAT+GGG + chr7_3:36885828-36885847 Msa1102800:CDS 35.0%
CTAAAGCAAAATTCAGTTGG+TGG + chr7_3:36885868-36885887 Msa1102800:CDS 35.0%
!!! GGTGGATTTTTAAGTCATTG+TGG + chr7_3:36885886-36885905 Msa1102800:CDS 35.0%
TTGTGGTTGGAATTCAACTT+TGG + chr7_3:36885903-36885922 Msa1102800:CDS 35.0%
! CTTTGGAAAGTATACAAGAG+GGG + chr7_3:36885920-36885939 Msa1102800:CDS 35.0%
! TTTGGAAAGTATACAAGAGG+GGG + chr7_3:36885921-36885940 Msa1102800:CDS 35.0%
AATAATGGCCAAGCTACTAT+TGG - chr7_3:36885949-36885968 None:intergenic 35.0%
ATTGCTTGTTCGGCAAATAA+TGG - chr7_3:36885964-36885983 None:intergenic 35.0%
AACAGCATTCATTGCTTGTT+CGG - chr7_3:36885974-36885993 None:intergenic 35.0%
! GTTATGTGATGGTCTTAAAG+TGG + chr7_3:36885996-36886015 Msa1102800:CDS 35.0%
! ATGGTCTTAAAGTGGCTTTA+AGG + chr7_3:36886004-36886023 Msa1102800:CDS 35.0%
! ATGATTAAGTGTGTGATGGA+AGG + chr7_3:36886075-36886094 Msa1102800:CDS 35.0%
! TGATTAAGTGTGTGATGGAA+GGG + chr7_3:36886076-36886095 Msa1102800:CDS 35.0%
! ATGGCATTGAAAGTCAAAGA+TGG + chr7_3:36886153-36886172 Msa1102800:CDS 35.0%
! TGTTTGGTGGAATTGTTTCA+AGG - chr7_3:36884982-36885001 None:intergenic 35.0%
!! AAGTCTTGTTTGTTGATTGG+TGG - chr7_3:36885022-36885041 None:intergenic 35.0%
!! GGTAAGTCTTGTTTGTTGAT+TGG - chr7_3:36885025-36885044 None:intergenic 35.0%
AACAAACAAGACTTACCTCA+AGG + chr7_3:36885028-36885047 Msa1102800:CDS 35.0%
! TGAGTTGAATTAGGATTCCT+GGG - chr7_3:36885060-36885079 None:intergenic 35.0%
! GTGTAACTGTGAGTTGAATT+AGG - chr7_3:36885069-36885088 None:intergenic 35.0%
TTGAGAGCTTCATGAATTGA+TGG - chr7_3:36885100-36885119 None:intergenic 35.0%
GAAAGAACAAAAGCTGAACA+AGG - chr7_3:36885229-36885248 None:intergenic 35.0%
! GAAACCTCTTCATCAAGTTT+TGG - chr7_3:36885268-36885287 None:intergenic 35.0%
CAAGAACCTATAAAGTTACC+AGG + chr7_3:36885307-36885326 Msa1102800:CDS 35.0%
ACACATCCTGGTAACTTTAT+AGG - chr7_3:36885316-36885335 None:intergenic 35.0%
ATGTATCTTGAACGTGCTAA+AGG + chr7_3:36885397-36885416 Msa1102800:CDS 35.0%
TAGCACTTGATTCTAATGCA+AGG - chr7_3:36885459-36885478 None:intergenic 35.0%
CTTGACCCTATTTGTGTAAT+GGG - chr7_3:36885535-36885554 None:intergenic 35.0%
ACTTGACCCTATTTGTGTAA+TGG - chr7_3:36885536-36885555 None:intergenic 35.0%
!! TATGTTTCTTTTGGAAGTGG+TGG + chr7_3:36885628-36885647 Msa1102800:CDS 35.0%
GAATGAACTAGCATTTGGTT+TGG + chr7_3:36885672-36885691 Msa1102800:CDS 35.0%
TGAGTGGTCAAAGATTCATT+TGG + chr7_3:36885698-36885717 Msa1102800:CDS 35.0%
GAGTGGTCAAAGATTCATTT+GGG + chr7_3:36885699-36885718 Msa1102800:CDS 35.0%
GTTCTTTCCAAAAACCCTTT+AGG - chr7_3:36885799-36885818 None:intergenic 35.0%
!! AAGGTTTGATTTTGCCATCA+TGG + chr7_3:36885827-36885846 Msa1102800:CDS 35.0%
!! AGGTTTGATTTTGCCATCAT+GGG + chr7_3:36885828-36885847 Msa1102800:CDS 35.0%
CTAAAGCAAAATTCAGTTGG+TGG + chr7_3:36885868-36885887 Msa1102800:CDS 35.0%
!!! GGTGGATTTTTAAGTCATTG+TGG + chr7_3:36885886-36885905 Msa1102800:CDS 35.0%
TTGTGGTTGGAATTCAACTT+TGG + chr7_3:36885903-36885922 Msa1102800:CDS 35.0%
! CTTTGGAAAGTATACAAGAG+GGG + chr7_3:36885920-36885939 Msa1102800:CDS 35.0%
! TTTGGAAAGTATACAAGAGG+GGG + chr7_3:36885921-36885940 Msa1102800:CDS 35.0%
AATAATGGCCAAGCTACTAT+TGG - chr7_3:36885949-36885968 None:intergenic 35.0%
ATTGCTTGTTCGGCAAATAA+TGG - chr7_3:36885964-36885983 None:intergenic 35.0%
AACAGCATTCATTGCTTGTT+CGG - chr7_3:36885974-36885993 None:intergenic 35.0%
! GTTATGTGATGGTCTTAAAG+TGG + chr7_3:36885996-36886015 Msa1102800:CDS 35.0%
! ATGGTCTTAAAGTGGCTTTA+AGG + chr7_3:36886004-36886023 Msa1102800:CDS 35.0%
! ATGATTAAGTGTGTGATGGA+AGG + chr7_3:36886075-36886094 Msa1102800:CDS 35.0%
! TGATTAAGTGTGTGATGGAA+GGG + chr7_3:36886076-36886095 Msa1102800:CDS 35.0%
! ATGGCATTGAAAGTCAAAGA+TGG + chr7_3:36886153-36886172 Msa1102800:CDS 35.0%
!! ATAGCTGTTATTTCAAGCCC+TGG + chr7_3:36884836-36884855 Msa1102800:CDS 40.0%
ATTCTACTATTGGGGCTATG+TGG - chr7_3:36884868-36884887 None:intergenic 40.0%
! TCTGGTAATGAACCAAGTGA+GGG - chr7_3:36884944-36884963 None:intergenic 40.0%
! ATCTGGTAATGAACCAAGTG+AGG - chr7_3:36884945-36884964 None:intergenic 40.0%
! GTGAGTTGAATTAGGATTCC+TGG - chr7_3:36885061-36885080 None:intergenic 40.0%
TTGGCCAAAACTTGATGAAG+AGG + chr7_3:36885261-36885280 Msa1102800:CDS 40.0%
TGGGACCCATTACACAAATA+GGG + chr7_3:36885527-36885546 Msa1102800:CDS 40.0%
!! GCATTTGGTTTGGAATTGAG+TGG + chr7_3:36885682-36885701 Msa1102800:CDS 40.0%
! GATTAAGTGTGTGATGGAAG+GGG + chr7_3:36886077-36886096 Msa1102800:CDS 40.0%
GCTACTCAGTTGGAAAAGAT+TGG + chr7_3:36886204-36886223 Msa1102800:CDS 40.0%
ACTCAGTTGGAAAAGATTGG+TGG + chr7_3:36886207-36886226 Msa1102800:CDS 40.0%
CTCAGTTGGAAAAGATTGGT+GGG + chr7_3:36886208-36886227 Msa1102800:CDS 40.0%
!! ATAGCTGTTATTTCAAGCCC+TGG + chr7_3:36884836-36884855 Msa1102800:CDS 40.0%
ATTCTACTATTGGGGCTATG+TGG - chr7_3:36884868-36884887 None:intergenic 40.0%
! TCTGGTAATGAACCAAGTGA+GGG - chr7_3:36884944-36884963 None:intergenic 40.0%
! ATCTGGTAATGAACCAAGTG+AGG - chr7_3:36884945-36884964 None:intergenic 40.0%
! GTGAGTTGAATTAGGATTCC+TGG - chr7_3:36885061-36885080 None:intergenic 40.0%
TTGGCCAAAACTTGATGAAG+AGG + chr7_3:36885261-36885280 Msa1102800:CDS 40.0%
TGGGACCCATTACACAAATA+GGG + chr7_3:36885527-36885546 Msa1102800:CDS 40.0%
!! GCATTTGGTTTGGAATTGAG+TGG + chr7_3:36885682-36885701 Msa1102800:CDS 40.0%
! GATTAAGTGTGTGATGGAAG+GGG + chr7_3:36886077-36886096 Msa1102800:CDS 40.0%
GCTACTCAGTTGGAAAAGAT+TGG + chr7_3:36886204-36886223 Msa1102800:CDS 40.0%
ACTCAGTTGGAAAAGATTGG+TGG + chr7_3:36886207-36886226 Msa1102800:CDS 40.0%
CTCAGTTGGAAAAGATTGGT+GGG + chr7_3:36886208-36886227 Msa1102800:CDS 40.0%
ACTTGCATCATTCCCTCACT+TGG + chr7_3:36884929-36884948 Msa1102800:CDS 45.0%
! TTACCTCAAGGAGTATACCC+AGG + chr7_3:36885040-36885059 Msa1102800:CDS 45.0%
ATTCCTGGGTATACTCCTTG+AGG - chr7_3:36885046-36885065 None:intergenic 45.0%
! CCATTGATTGGTACACATCC+TGG - chr7_3:36885328-36885347 None:intergenic 45.0%
CCAGGATGTGTACCAATCAA+TGG + chr7_3:36885325-36885344 Msa1102800:CDS 45.0%
GCATTGGAACAAAAGGGTGA+TGG + chr7_3:36885484-36885503 Msa1102800:CDS 45.0%
!! ATTTGTGTAATGGGTCCCAC+AGG - chr7_3:36885526-36885545 None:intergenic 45.0%
GTGGGACCCATTACACAAAT+AGG + chr7_3:36885526-36885545 Msa1102800:CDS 45.0%
GCAGCACTAACTGAATCACT+TGG - chr7_3:36885736-36885755 None:intergenic 45.0%
TTCACACTTGGCTACTCAGT+TGG + chr7_3:36886194-36886213 Msa1102800:CDS 45.0%
ACTTGCATCATTCCCTCACT+TGG + chr7_3:36884929-36884948 Msa1102800:CDS 45.0%
! TTACCTCAAGGAGTATACCC+AGG + chr7_3:36885040-36885059 Msa1102800:CDS 45.0%
ATTCCTGGGTATACTCCTTG+AGG - chr7_3:36885046-36885065 None:intergenic 45.0%
! CCATTGATTGGTACACATCC+TGG - chr7_3:36885328-36885347 None:intergenic 45.0%
CCAGGATGTGTACCAATCAA+TGG + chr7_3:36885325-36885344 Msa1102800:CDS 45.0%
GCATTGGAACAAAAGGGTGA+TGG + chr7_3:36885484-36885503 Msa1102800:CDS 45.0%
!! ATTTGTGTAATGGGTCCCAC+AGG - chr7_3:36885526-36885545 None:intergenic 45.0%
GTGGGACCCATTACACAAAT+AGG + chr7_3:36885526-36885545 Msa1102800:CDS 45.0%
GCAGCACTAACTGAATCACT+TGG - chr7_3:36885736-36885755 None:intergenic 45.0%
TTCACACTTGGCTACTCAGT+TGG + chr7_3:36886194-36886213 Msa1102800:CDS 45.0%
! TCAACTTGAGGTGCCCATGA+TGG - chr7_3:36885844-36885863 None:intergenic 50.0%
! TGTGTGATGGAAGGGGAAGA+AGG + chr7_3:36886084-36886103 Msa1102800:CDS 50.0%
! TCAACTTGAGGTGCCCATGA+TGG - chr7_3:36885844-36885863 None:intergenic 50.0%
! TGTGTGATGGAAGGGGAAGA+AGG + chr7_3:36886084-36886103 Msa1102800:CDS 50.0%
GGGCTATGTGGCTGAAACCA+GGG - chr7_3:36884856-36884875 None:intergenic 55.0%
!! AGGGGGTGCCAATAGTAGCT+TGG + chr7_3:36885938-36885957 Msa1102800:CDS 55.0%
GGGCTATGTGGCTGAAACCA+GGG - chr7_3:36884856-36884875 None:intergenic 55.0%
!! AGGGGGTGCCAATAGTAGCT+TGG + chr7_3:36885938-36885957 Msa1102800:CDS 55.0%
GGGGCTATGTGGCTGAAACC+AGG - chr7_3:36884857-36884876 None:intergenic 60.0%
GGGGCTATGTGGCTGAAACC+AGG - chr7_3:36884857-36884876 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 36884818 36886236 36884818 ID=Msa1102800;Name=Msa1102800
chr7_3 mRNA 36884818 36886236 36884818 ID=Msa1102800-mRNA-1;Parent=Msa1102800;Name=Msa1102800-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|-1|0|1|-1|1|1|0|472
chr7_3 exon 36884818 36886236 36884818 ID=Msa1102800-mRNA-1:exon:7636;Parent=Msa1102800-mRNA-1
chr7_3 CDS 36884818 36886236 36884818 ID=Msa1102800-mRNA-1:cds;Parent=Msa1102800-mRNA-1
Gene Sequence

>Msa1102800

ATGGCAAAAACAACTCACATAGCTGTTATTTCAAGCCCTGGTTTCAGCCACATAGCCCCAATAGTAGAATTCTCCAAAAGATTAGTCACAAATCATCCAAATTTTCATGTCACTTGCATCATTCCCTCACTTGGTTCATTACCAGATTCATCAAAATCATACCTTGAAACAATTCCACCAAACATAAACTTAGTTTTTCTTCCACCAATCAACAAACAAGACTTACCTCAAGGAGTATACCCAGGAATCCTAATTCAACTCACAGTTACACGCTCTCTACCATCAATTCATGAAGCTCTCAAATCAATAACTTCAAAAGCACCTTTAGTTGCTATAATTGCTGATAAATTTGCATTGGAAGCACTAGATTTTGCCAAAGAATTCAATTCTTTGTCTTATCTTTACTTCCCTTGTTCAGCTTTTGTTCTTTCTTTTTATTTACATTGGCCAAAACTTGATGAAGAGGTTTCATGTAAATACAAAGAATTACAAGAACCTATAAAGTTACCAGGATGTGTACCAATCAATGGTATTGATCTTCATACAGTAACAAAAGATAGATCAGGTCAAGCTTACAAAATGTATCTTGAACGTGCTAAAGGTATGTATTTTGTTGATGGAATCTTGTTTAACAGTTTCCTTGCATTAGAATCAAGTGCTATAAAAGCATTGGAACAAAAGGGTGATGGAAAAATCAGTTTTTTTCCTGTGGGACCCATTACACAAATAGGGTCAAGTAACAATGATGTTGTTGGTGATGAACTTGAATGTTTGAAATGGTTGAAAAACCAACCACAAAATTCTGTTTTGTATGTTTCTTTTGGAAGTGGTGGAACACTTTCTCAGAGACAAATGAATGAACTAGCATTTGGTTTGGAATTGAGTGGTCAAAGATTCATTTGGGTTGTGAGACAACCAAGTGATTCAGTTAGTGCTGCTTATCTTGAAGATGCAAATGAAGATCCACTGAAATTTTTACCTAAAGGGTTTTTGGAAAGAACCAAAGAAAAAGGTTTGATTTTGCCATCATGGGCACCTCAAGTTGAAATACTAAAGCAAAATTCAGTTGGTGGATTTTTAAGTCATTGTGGTTGGAATTCAACTTTGGAAAGTATACAAGAGGGGGTGCCAATAGTAGCTTGGCCATTATTTGCCGAACAAGCAATGAATGCTGTTATGTTATGTGATGGTCTTAAAGTGGCTTTAAGGTTGAAATTTGAAGATGATGAAATTGTGGAAAAGGAGAAAATTTCAAAGATGATTAAGTGTGTGATGGAAGGGGAAGAAGGTAAAGCAATGTGTGATAGAATGAAGAGTTTAAGAGAATGTGTTGCTATGGCATTGAAAGTCAAAGATGGTTCTTCAATACAAACTATTTCACACTTGGCTACTCAGTTGGAAAAGATTGGTGGGATTTAG

Protein sequence

>Msa1102800

MAKTTHIAVISSPGFSHIAPIVEFSKRLVTNHPNFHVTCIIPSLGSLPDSSKSYLETIPPNINLVFLPPINKQDLPQGVYPGILIQLTVTRSLPSIHEALKSITSKAPLVAIIADKFALEALDFAKEFNSLSYLYFPCSAFVLSFYLHWPKLDEEVSCKYKELQEPIKLPGCVPINGIDLHTVTKDRSGQAYKMYLERAKGMYFVDGILFNSFLALESSAIKALEQKGDGKISFFPVGPITQIGSSNNDVVGDELECLKWLKNQPQNSVLYVSFGSGGTLSQRQMNELAFGLELSGQRFIWVVRQPSDSVSAAYLEDANEDPLKFLPKGFLERTKEKGLILPSWAPQVEILKQNSVGGFLSHCGWNSTLESIQEGVPIVAWPLFAEQAMNAVMLCDGLKVALRLKFEDDEIVEKEKISKMIKCVMEGEEGKAMCDRMKSLRECVAMALKVKDGSSIQTISHLATQLEKIGGI*