Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105710 | GAU11198.1 | 79.026 | 267 | 55 | 1 | 9 | 275 | 18 | 283 | 1.33e-153 | 440 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105710 | sp|Q9FPT1|UBP12_ARATH | 32.667 | 150 | 92 | 4 | 18 | 166 | 42 | 183 | 5.86e-16 | 81.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105710 | A0A2K3N5Y4 | 81.081 | 259 | 47 | 2 | 8 | 265 | 1 | 258 | 8.30e-151 | 433 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1105710 | Msa1105720 | 0.810510 | 1.112028e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105710 | MtrunA17_Chr4g0069161 | 41.313 | 259 | 147 | 4 | 26 | 279 | 14 | 272 | 9.67e-60 | 192 |
| Msa1105710 | MtrunA17_Chr8g0334821 | 35.548 | 301 | 164 | 9 | 9 | 280 | 5 | 304 | 9.07e-52 | 176 |
| Msa1105710 | MtrunA17_Chr1g0166871 | 29.286 | 140 | 93 | 3 | 32 | 171 | 14 | 147 | 1.57e-19 | 86.7 |
| Msa1105710 | MtrunA17_Chr5g0439971 | 30.120 | 166 | 100 | 4 | 1 | 166 | 39 | 188 | 4.34e-19 | 87.4 |
| Msa1105710 | MtrunA17_Chr5g0443161 | 32.836 | 134 | 83 | 3 | 29 | 162 | 31 | 157 | 8.86e-19 | 83.6 |
| Msa1105710 | MtrunA17_Chr1g0170261 | 29.697 | 165 | 101 | 4 | 2 | 166 | 36 | 185 | 6.54e-18 | 84.0 |
| Msa1105710 | MtrunA17_Chr3g0119031 | 31.655 | 139 | 87 | 3 | 28 | 166 | 53 | 183 | 1.55e-17 | 82.8 |
| Msa1105710 | MtrunA17_Chr5g0443194 | 35.878 | 131 | 76 | 4 | 32 | 162 | 20 | 142 | 1.64e-14 | 73.2 |
| Msa1105710 | MtrunA17_Chr3g0137501 | 28.966 | 145 | 92 | 6 | 32 | 169 | 407 | 547 | 3.34e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105710 | AT3G17380.1 | 45.136 | 257 | 137 | 4 | 27 | 280 | 17 | 272 | 1.53e-71 | 223 |
| Msa1105710 | AT3G20370.1 | 36.882 | 263 | 150 | 9 | 18 | 271 | 73 | 328 | 6.12e-44 | 154 |
| Msa1105710 | AT3G20370.2 | 37.262 | 263 | 149 | 10 | 18 | 271 | 51 | 306 | 6.30e-44 | 153 |
| Msa1105710 | AT1G58270.1 | 34.127 | 252 | 152 | 5 | 25 | 269 | 90 | 334 | 2.66e-38 | 139 |
| Msa1105710 | AT3G22080.1 | 32.971 | 276 | 176 | 7 | 13 | 280 | 2 | 276 | 7.67e-38 | 136 |
| Msa1105710 | AT3G28220.1 | 36.000 | 250 | 151 | 8 | 25 | 269 | 76 | 321 | 7.82e-38 | 137 |
| Msa1105710 | AT5G26260.1 | 31.923 | 260 | 175 | 2 | 17 | 275 | 48 | 306 | 5.32e-36 | 132 |
| Msa1105710 | AT5G26280.1 | 32.806 | 253 | 168 | 2 | 25 | 276 | 55 | 306 | 1.65e-35 | 130 |
| Msa1105710 | AT5G26280.3 | 32.806 | 253 | 168 | 2 | 25 | 276 | 74 | 325 | 2.38e-35 | 130 |
| Msa1105710 | AT5G26290.1 | 33.597 | 253 | 160 | 3 | 25 | 276 | 48 | 293 | 5.75e-35 | 129 |
| Msa1105710 | AT3G20360.1 | 31.387 | 274 | 175 | 8 | 17 | 280 | 54 | 324 | 9.15e-35 | 129 |
| Msa1105710 | AT2G15710.1 | 35.294 | 238 | 146 | 6 | 25 | 258 | 94 | 327 | 3.70e-34 | 127 |
| Msa1105710 | AT5G26320.1 | 31.687 | 243 | 162 | 3 | 25 | 264 | 55 | 296 | 3.94e-34 | 127 |
| Msa1105710 | AT2G04170.5 | 34.286 | 245 | 159 | 2 | 25 | 268 | 125 | 368 | 2.34e-33 | 125 |
| Msa1105710 | AT2G04170.4 | 34.025 | 241 | 157 | 2 | 25 | 264 | 3 | 242 | 1.33e-32 | 122 |
| Msa1105710 | AT2G04170.3 | 34.025 | 241 | 157 | 2 | 25 | 264 | 3 | 242 | 1.33e-32 | 122 |
| Msa1105710 | AT4G09770.3 | 30.612 | 245 | 160 | 6 | 25 | 266 | 5 | 242 | 5.03e-32 | 119 |
| Msa1105710 | AT2G04170.6 | 34.025 | 241 | 157 | 2 | 25 | 264 | 85 | 324 | 6.02e-32 | 122 |
| Msa1105710 | AT4G09770.2 | 30.400 | 250 | 164 | 6 | 25 | 271 | 5 | 247 | 6.55e-32 | 120 |
| Msa1105710 | AT4G09770.1 | 30.400 | 250 | 164 | 6 | 25 | 271 | 5 | 247 | 6.55e-32 | 120 |
| Msa1105710 | AT4G09770.5 | 30.612 | 245 | 160 | 6 | 25 | 266 | 31 | 268 | 7.06e-32 | 119 |
| Msa1105710 | AT2G04170.2 | 34.025 | 241 | 157 | 2 | 25 | 264 | 125 | 364 | 1.07e-31 | 122 |
| Msa1105710 | AT2G04170.1 | 34.025 | 241 | 157 | 2 | 25 | 264 | 125 | 364 | 1.07e-31 | 122 |
| Msa1105710 | AT4G09770.4 | 30.400 | 250 | 164 | 6 | 25 | 271 | 31 | 273 | 1.26e-31 | 120 |
| Msa1105710 | AT5G26300.1 | 30.830 | 253 | 172 | 3 | 25 | 276 | 55 | 305 | 2.05e-30 | 117 |
| Msa1105710 | AT1G65150.2 | 30.417 | 240 | 153 | 4 | 25 | 263 | 15 | 241 | 6.29e-29 | 112 |
| Msa1105710 | AT1G65150.1 | 30.417 | 240 | 153 | 4 | 25 | 263 | 15 | 241 | 6.29e-29 | 112 |
| Msa1105710 | AT2G04190.1 | 31.474 | 251 | 165 | 4 | 25 | 271 | 115 | 362 | 8.61e-29 | 114 |
| Msa1105710 | AT3G20380.1 | 30.000 | 250 | 166 | 4 | 26 | 271 | 83 | 327 | 8.84e-29 | 113 |
| Msa1105710 | AT3G22085.1 | 28.676 | 272 | 162 | 9 | 16 | 280 | 5 | 251 | 1.28e-27 | 108 |
| Msa1105710 | AT4G09780.2 | 27.925 | 265 | 184 | 5 | 4 | 266 | 37 | 296 | 2.51e-27 | 110 |
| Msa1105710 | AT4G09780.1 | 27.925 | 265 | 184 | 5 | 4 | 266 | 37 | 296 | 2.86e-27 | 110 |
| Msa1105710 | AT2G04170.7 | 36.170 | 188 | 119 | 1 | 25 | 212 | 125 | 311 | 4.64e-26 | 105 |
| Msa1105710 | AT4G01390.1 | 31.120 | 241 | 147 | 9 | 32 | 265 | 22 | 250 | 5.89e-26 | 104 |
| Msa1105710 | AT4G00780.1 | 31.325 | 249 | 147 | 11 | 32 | 271 | 22 | 255 | 1.49e-25 | 103 |
| Msa1105710 | AT1G69660.1 | 32.804 | 189 | 123 | 4 | 97 | 282 | 8 | 195 | 2.93e-25 | 100 |
| Msa1105710 | AT5G26280.2 | 29.644 | 253 | 153 | 3 | 25 | 276 | 55 | 283 | 1.18e-24 | 101 |
| Msa1105710 | AT1G69650.1 | 27.336 | 289 | 161 | 11 | 8 | 280 | 1 | 256 | 1.73e-19 | 86.7 |
| Msa1105710 | AT1G65370.1 | 30.159 | 189 | 110 | 5 | 82 | 262 | 1 | 175 | 2.72e-19 | 84.7 |
| Msa1105710 | AT1G65050.2 | 33.594 | 128 | 77 | 2 | 25 | 152 | 15 | 134 | 6.99e-19 | 82.0 |
| Msa1105710 | AT1G65050.1 | 33.594 | 128 | 77 | 2 | 25 | 152 | 15 | 134 | 6.99e-19 | 82.0 |
| Msa1105710 | AT3G46190.1 | 28.464 | 267 | 143 | 10 | 25 | 282 | 28 | 255 | 2.27e-18 | 83.6 |
| Msa1105710 | AT3G46190.2 | 28.464 | 267 | 143 | 10 | 25 | 282 | 48 | 275 | 4.19e-18 | 83.2 |
| Msa1105710 | AT5G06600.3 | 32.667 | 150 | 92 | 4 | 18 | 166 | 42 | 183 | 4.49e-17 | 81.6 |
| Msa1105710 | AT5G06600.2 | 32.667 | 150 | 92 | 4 | 18 | 166 | 41 | 182 | 5.63e-17 | 81.6 |
| Msa1105710 | AT5G06600.1 | 32.667 | 150 | 92 | 4 | 18 | 166 | 42 | 183 | 5.95e-17 | 81.3 |
| Msa1105710 | AT3G11910.4 | 28.144 | 167 | 111 | 4 | 1 | 166 | 23 | 181 | 7.16e-16 | 78.2 |
| Msa1105710 | AT3G11910.2 | 28.144 | 167 | 111 | 4 | 1 | 166 | 23 | 181 | 7.16e-16 | 78.2 |
| Msa1105710 | AT3G11910.3 | 28.144 | 167 | 111 | 4 | 1 | 166 | 24 | 182 | 7.29e-16 | 78.2 |
| Msa1105710 | AT3G11910.1 | 28.144 | 167 | 111 | 4 | 1 | 166 | 24 | 182 | 7.29e-16 | 78.2 |
| Msa1105710 | AT2G32870.1 | 27.203 | 261 | 161 | 9 | 22 | 268 | 117 | 362 | 2.93e-14 | 72.8 |
| Msa1105710 | AT2G32870.2 | 27.612 | 268 | 164 | 10 | 22 | 275 | 117 | 368 | 4.30e-13 | 69.3 |
| Msa1105710 | AT2G32880.1 | 25.000 | 264 | 171 | 9 | 22 | 271 | 17 | 267 | 6.38e-12 | 65.5 |
| Msa1105710 | AT2G32880.2 | 25.292 | 257 | 165 | 9 | 22 | 264 | 17 | 260 | 7.35e-11 | 62.0 |
| Msa1105710 | AT2G25320.1 | 26.699 | 206 | 127 | 9 | 32 | 217 | 405 | 606 | 7.49e-11 | 63.2 |
| Msa1105710 | AT2G25320.3 | 26.699 | 206 | 127 | 9 | 32 | 217 | 406 | 607 | 7.56e-11 | 63.2 |
Find 80 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGATACATTTGATTATT+TGG | 0.129920 | 7_3:+44504354 | Msa1105710:three_prime_UTR |
| CAATCAATAGGTAATGAAAT+TGG | 0.139287 | 7_3:-44503063 | None:intergenic |
| TTGCCACGTTTCTATTTATT+TGG | 0.148271 | 7_3:+44503029 | Msa1105710:CDS |
| CAACATGTTTCCCACAAATT+TGG | 0.179639 | 7_3:-44504003 | None:intergenic |
| GTCCTTCTCTTTGCTTTCTA+AGG | 0.213307 | 7_3:+44502742 | Msa1105710:CDS |
| GTGTCAATGTTGATGAAATT+TGG | 0.215827 | 7_3:-44503544 | None:intergenic |
| AATTTCCAGCTATGGGAAAT+AGG | 0.248028 | 7_3:-44503685 | None:intergenic |
| GGATAAGCAATCGCCTTTAT+TGG | 0.263509 | 7_3:-44503647 | None:intergenic |
| AATAGGGACAGGATTTATTA+TGG | 0.273304 | 7_3:-44503668 | None:intergenic |
| TTTCCCACAAATTTGGTCTT+TGG | 0.299164 | 7_3:-44503996 | None:intergenic |
| TTTATATGAATCACCTTTCA+TGG | 0.305529 | 7_3:-44502416 | None:intergenic |
| TTCTATTTATTTGGCAATCA+TGG | 0.321583 | 7_3:+44503038 | Msa1105710:CDS |
| ATTGAATTACTATCATATAT+TGG | 0.322500 | 7_3:+44504327 | Msa1105710:three_prime_UTR |
| CGCAGAAGATAGCCTATATA+TGG | 0.326159 | 7_3:-44504041 | None:intergenic |
| CAATTTCATTACCTATTGAT+TGG | 0.338977 | 7_3:+44503064 | Msa1105710:CDS |
| ATATGCTGAAAAGTTTATAA+TGG | 0.340449 | 7_3:-44503097 | None:intergenic |
| ATTTCCAGCTATGGGAAATA+GGG | 0.362798 | 7_3:-44503684 | None:intergenic |
| TTTCCCTCAACGACTCCATT+GGG | 0.382967 | 7_3:-44503887 | None:intergenic |
| TTGTAGCTGGAGACTATAAA+TGG | 0.384295 | 7_3:+44503755 | Msa1105710:CDS |
| TCCTCACGTTATGTGTGTTT+CGG | 0.387382 | 7_3:-44504208 | None:intergenic |
| AGCTTGTCTATATACCCATC+TGG | 0.388009 | 7_3:+44502985 | Msa1105710:CDS |
| ATTTGCAAAATTTCCAGCTA+TGG | 0.388409 | 7_3:-44503693 | None:intergenic |
| ATGATAGTAATTCAATATGA+TGG | 0.401685 | 7_3:-44504320 | None:intergenic |
| CTTTCCCTCAACGACTCCAT+TGG | 0.417745 | 7_3:-44503888 | None:intergenic |
| CGACTCCATTGGGGTATAAA+CGG | 0.418916 | 7_3:-44503877 | None:intergenic |
| AATTTCATTACCTATTGATT+GGG | 0.420880 | 7_3:+44503065 | Msa1105710:CDS |
| GTGAAGAAGACTGCCAATAA+AGG | 0.422975 | 7_3:+44503634 | Msa1105710:CDS |
| TTCCTCTCTGTGTTCCCAGA+TGG | 0.430780 | 7_3:-44503000 | None:intergenic |
| AATCAATAGGTAATGAAATT+GGG | 0.431396 | 7_3:-44503062 | None:intergenic |
| GAAAGTGTAAGTCCATATAT+AGG | 0.444059 | 7_3:+44504029 | Msa1105710:CDS |
| TTTGCAAAATTTCCAGCTAT+GGG | 0.446728 | 7_3:-44503692 | None:intergenic |
| CTGTCCCTATTTCCCATAGC+TGG | 0.449178 | 7_3:+44503680 | Msa1105710:CDS |
| CCCTACAAAAGGATATTTGT+TGG | 0.450408 | 7_3:+44503576 | Msa1105710:CDS |
| TCCTCTCTGTGTTCCCAGAT+GGG | 0.451582 | 7_3:-44502999 | None:intergenic |
| CGTTATGTGTGTTTCGGTGT+CGG | 0.465940 | 7_3:-44504202 | None:intergenic |
| GCATTGATCTCCCAATCAAT+AGG | 0.467061 | 7_3:-44503075 | None:intergenic |
| CGCGCCAAAGACCAAATTTG+TGG | 0.473381 | 7_3:+44503992 | Msa1105710:CDS |
| TACCCCAATGGAGTCGTTGA+GGG | 0.484655 | 7_3:+44503884 | Msa1105710:CDS |
| CAATGGAGTCGTTGAGGGAA+AGG | 0.485272 | 7_3:+44503889 | Msa1105710:CDS |
| GAGTCGGAATCCTTTGTAGC+TGG | 0.507263 | 7_3:+44503742 | Msa1105710:CDS |
| TTGAAGCTGGAGGTTACAAA+TGG | 0.507558 | 7_3:+44502795 | Msa1105710:CDS |
| TAACTAGTTCTTCATAGCAA+TGG | 0.507939 | 7_3:+44502336 | Msa1105710:exon |
| TATACGTGTCTTTGTCGTGT+TGG | 0.508433 | 7_3:+44504158 | Msa1105710:three_prime_UTR |
| CAGCTATGGGAAATAGGGAC+AGG | 0.512335 | 7_3:-44503679 | None:intergenic |
| GTCTCGGAAGAGTTTGAAGC+TGG | 0.523075 | 7_3:+44502782 | Msa1105710:CDS |
| AACATGCAGATGCATCTGTT+AGG | 0.533883 | 7_3:+44503488 | Msa1105710:intron |
| TGAATCACCTTTCATGGGTG+TGG | 0.537773 | 7_3:-44502410 | None:intergenic |
| AGGCTATCTTCTGCGAAGCA+TGG | 0.538090 | 7_3:+44504049 | Msa1105710:CDS |
| TTATATGAATCACCTTTCAT+GGG | 0.539533 | 7_3:-44502415 | None:intergenic |
| ACATTTAAAGACCCTACAAA+AGG | 0.540200 | 7_3:+44503565 | Msa1105710:CDS |
| TGATAGTAATTCAATATGAT+GGG | 0.543364 | 7_3:-44504319 | None:intergenic |
| AATGGAGTCGTTGAGGGAAA+GGG | 0.546147 | 7_3:+44503890 | Msa1105710:CDS |
| TTTATAGTCTCCAGCTACAA+AGG | 0.550212 | 7_3:-44503752 | None:intergenic |
| TCTCAAATTATTAGTGGTGG+CGG | 0.552526 | 7_3:-44504113 | None:intergenic |
| GCGCCAAAGACCAAATTTGT+GGG | 0.559270 | 7_3:+44503993 | Msa1105710:CDS |
| TCATGTCCTGAAAACAGAGT+GGG | 0.562047 | 7_3:+44503516 | Msa1105710:CDS |
| TTGAATGTGTAATGACTTGG+CGG | 0.569734 | 7_3:-44502713 | None:intergenic |
| GGCCTTAGAAAGCAAAGAGA+AGG | 0.575991 | 7_3:-44502744 | None:intergenic |
| ATCTGACACTAAAATTCTCG+TGG | 0.589622 | 7_3:+44503958 | Msa1105710:CDS |
| ACAAACAGTATTCATATCCA+TGG | 0.591072 | 7_3:-44502374 | None:intergenic |
| GATGAATACGTTACAACTCA+AGG | 0.603967 | 7_3:+44503132 | Msa1105710:CDS |
| GCTTGTCTATATACCCATCT+GGG | 0.606052 | 7_3:+44502986 | Msa1105710:CDS |
| ACGTGAGGATTGTTCGTGGT+AGG | 0.606139 | 7_3:+44504222 | Msa1105710:three_prime_UTR |
| AACTTATAGGGAATCAGTGA+AGG | 0.610016 | 7_3:+44502233 | None:intergenic |
| TTCCCTCAACGACTCCATTG+GGG | 0.610483 | 7_3:-44503886 | None:intergenic |
| TTGTCTACCACACCCATGAA+AGG | 0.611440 | 7_3:+44502403 | Msa1105710:CDS |
| TCTGGGAACACAGAGAGGAA+TGG | 0.613084 | 7_3:+44503003 | Msa1105710:CDS |
| ATACCCCAATGGAGTCGTTG+AGG | 0.614900 | 7_3:+44503883 | Msa1105710:CDS |
| TCGGAAGAGTTTGAAGCTGG+AGG | 0.615592 | 7_3:+44502785 | Msa1105710:CDS |
| GGTTACTGTATGTTCTACCA+TGG | 0.616125 | 7_3:+44502357 | Msa1105710:CDS |
| AAGCTCCGTTTATACCCCAA+TGG | 0.628057 | 7_3:+44503872 | Msa1105710:CDS |
| TTCATGTCCTGAAAACAGAG+TGG | 0.637299 | 7_3:+44503515 | Msa1105710:CDS |
| AAATTTAGACAAGTACGAGT+CGG | 0.642137 | 7_3:+44503726 | Msa1105710:CDS |
| ACCCATCTGGGAACACAGAG+AGG | 0.643127 | 7_3:+44502998 | Msa1105710:CDS |
| CATAACGTGAGGATTGTTCG+TGG | 0.643569 | 7_3:+44504218 | Msa1105710:three_prime_UTR |
| CATGTCCTGAAAACAGAGTG+GGG | 0.661266 | 7_3:+44503517 | Msa1105710:CDS |
| ATGGATACGAACACAAACAT+CGG | 0.663509 | 7_3:+44504068 | Msa1105710:CDS |
| ATGGGTGTGGTAGACAACAA+TGG | 0.666956 | 7_3:-44502397 | None:intergenic |
| ACCGAAACACACATAACGTG+AGG | 0.674205 | 7_3:+44504207 | Msa1105710:three_prime_UTR |
| TTGCCAAATAAATAGAAACG+TGG | 0.730686 | 7_3:-44503032 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAACTAATTAATGAA+GGG | - | chr7_3:44502302-44502321 | None:intergenic | 10.0% |
| !! | AAAAAATAACTAATTAATGA+AGG | - | chr7_3:44502303-44502322 | None:intergenic | 10.0% |
| !!! | TAATTAGTTATTTTTTCTTA+AGG | + | chr7_3:44502307-44502326 | Msa1105710:five_prime_UTR | 10.0% |
| !!! | AATTAGTTATTTTTTCTTAA+GGG | + | chr7_3:44502308-44502327 | Msa1105710:five_prime_UTR | 10.0% |
| !!! | TATGTATGATATAAATTTTA+AGG | + | chr7_3:44503207-44503226 | Msa1105710:intron | 10.0% |
| !!! | TAATTTTTTAATATCTTTTC+AGG | + | chr7_3:44503407-44503426 | Msa1105710:intron | 10.0% |
| !! | AAAAATAACTAATTAATGAA+GGG | - | chr7_3:44502302-44502321 | None:intergenic | 10.0% |
| !! | AAAAAATAACTAATTAATGA+AGG | - | chr7_3:44502303-44502322 | None:intergenic | 10.0% |
| !!! | TAATTAGTTATTTTTTCTTA+AGG | + | chr7_3:44502307-44502326 | Msa1105710:five_prime_UTR | 10.0% |
| !!! | AATTAGTTATTTTTTCTTAA+GGG | + | chr7_3:44502308-44502327 | Msa1105710:five_prime_UTR | 10.0% |
| !!! | TATGTATGATATAAATTTTA+AGG | + | chr7_3:44503207-44503226 | Msa1105710:intron | 10.0% |
| !!! | TAATTTTTTAATATCTTTTC+AGG | + | chr7_3:44503407-44503426 | Msa1105710:intron | 10.0% |
| !!! | TTTATATTGATATCTTTTAC+AGG | + | chr7_3:44502680-44502699 | Msa1105710:intron | 15.0% |
| !!! | TATGATATAAATTTTAAGGT+TGG | + | chr7_3:44503211-44503230 | Msa1105710:intron | 15.0% |
| !! | TTATAATGTAGTATAAGATA+AGG | - | chr7_3:44503457-44503476 | None:intergenic | 15.0% |
| !! | AGCTAAAAATAATGAAATAT+GGG | - | chr7_3:44503918-44503937 | None:intergenic | 15.0% |
| !! | ATTGAATTACTATCATATAT+TGG | + | chr7_3:44504327-44504346 | Msa1105710:three_prime_UTR | 15.0% |
| !! | AAAGATACATTTGATTATTT+AGG | + | chr7_3:44504355-44504374 | Msa1105710:three_prime_UTR | 15.0% |
| !!! | TTTATATTGATATCTTTTAC+AGG | + | chr7_3:44502680-44502699 | Msa1105710:intron | 15.0% |
| !!! | TATGATATAAATTTTAAGGT+TGG | + | chr7_3:44503211-44503230 | Msa1105710:intron | 15.0% |
| !! | TTATAATGTAGTATAAGATA+AGG | - | chr7_3:44503457-44503476 | None:intergenic | 15.0% |
| !! | AGCTAAAAATAATGAAATAT+GGG | - | chr7_3:44503918-44503937 | None:intergenic | 15.0% |
| !! | ATTGAATTACTATCATATAT+TGG | + | chr7_3:44504327-44504346 | Msa1105710:three_prime_UTR | 15.0% |
| !! | AGATTAGATACATTAAAAGA+AGG | + | chr7_3:44502617-44502636 | Msa1105710:intron | 20.0% |
| !! | AATGGTATGTAAATGTATTT+AGG | + | chr7_3:44502813-44502832 | Msa1105710:intron | 20.0% |
| !! | AATCAATAGGTAATGAAATT+GGG | - | chr7_3:44503065-44503084 | None:intergenic | 20.0% |
| !!! | AATTTCATTACCTATTGATT+GGG | + | chr7_3:44503065-44503084 | Msa1105710:CDS | 20.0% |
| !! | ATATGCTGAAAAGTTTATAA+TGG | - | chr7_3:44503100-44503119 | None:intergenic | 20.0% |
| !! | TGATATTTAATCACTAACTT+TGG | - | chr7_3:44503322-44503341 | None:intergenic | 20.0% |
| !! | GAGCTAAAAATAATGAAATA+TGG | - | chr7_3:44503919-44503938 | None:intergenic | 20.0% |
| !!! | TATTTCATTATTTTTAGCTC+TGG | + | chr7_3:44503919-44503938 | Msa1105710:CDS | 20.0% |
| !!! | AGATTTTCTCAAATTATTAG+TGG | - | chr7_3:44504122-44504141 | None:intergenic | 20.0% |
| !! | AAAAATTAAGAGATTATCAC+AGG | - | chr7_3:44504268-44504287 | None:intergenic | 20.0% |
| !! | TGATAGTAATTCAATATGAT+GGG | - | chr7_3:44504322-44504341 | None:intergenic | 20.0% |
| !! | ATGATAGTAATTCAATATGA+TGG | - | chr7_3:44504323-44504342 | None:intergenic | 20.0% |
| !! | AGATTAGATACATTAAAAGA+AGG | + | chr7_3:44502617-44502636 | Msa1105710:intron | 20.0% |
| !! | AATGGTATGTAAATGTATTT+AGG | + | chr7_3:44502813-44502832 | Msa1105710:intron | 20.0% |
| !! | AATCAATAGGTAATGAAATT+GGG | - | chr7_3:44503065-44503084 | None:intergenic | 20.0% |
| !!! | AATTTCATTACCTATTGATT+GGG | + | chr7_3:44503065-44503084 | Msa1105710:CDS | 20.0% |
| !! | ATATGCTGAAAAGTTTATAA+TGG | - | chr7_3:44503100-44503119 | None:intergenic | 20.0% |
| !! | TGATATTTAATCACTAACTT+TGG | - | chr7_3:44503322-44503341 | None:intergenic | 20.0% |
| !! | GAGCTAAAAATAATGAAATA+TGG | - | chr7_3:44503919-44503938 | None:intergenic | 20.0% |
| !!! | TATTTCATTATTTTTAGCTC+TGG | + | chr7_3:44503919-44503938 | Msa1105710:CDS | 20.0% |
| !!! | AGATTTTCTCAAATTATTAG+TGG | - | chr7_3:44504122-44504141 | None:intergenic | 20.0% |
| !! | AAAAATTAAGAGATTATCAC+AGG | - | chr7_3:44504268-44504287 | None:intergenic | 20.0% |
| !! | TGATAGTAATTCAATATGAT+GGG | - | chr7_3:44504322-44504341 | None:intergenic | 20.0% |
| !! | ATGATAGTAATTCAATATGA+TGG | - | chr7_3:44504323-44504342 | None:intergenic | 20.0% |
| !!! | AATTAATGAAGGGTTTTATC+TGG | - | chr7_3:44502292-44502311 | None:intergenic | 25.0% |
| ! | TTATATGAATCACCTTTCAT+GGG | - | chr7_3:44502418-44502437 | None:intergenic | 25.0% |
| ! | TTTATATGAATCACCTTTCA+TGG | - | chr7_3:44502419-44502438 | None:intergenic | 25.0% |
| ! | TGATTCATATAAACAACAGT+TGG | + | chr7_3:44502426-44502445 | Msa1105710:intron | 25.0% |
| !! | CTTTTCCGATTTAGTATTTA+GGG | - | chr7_3:44502570-44502589 | None:intergenic | 25.0% |
| !! | ACTTTTCCGATTTAGTATTT+AGG | - | chr7_3:44502571-44502590 | None:intergenic | 25.0% |
| ! | TTAGATACATTAAAAGAAGG+TGG | + | chr7_3:44502620-44502639 | Msa1105710:intron | 25.0% |
| !! | TATTGATATCTTTTACAGGA+AGG | + | chr7_3:44502684-44502703 | Msa1105710:intron | 25.0% |
| !! | ATTTTGAATGTGTAATGACT+TGG | - | chr7_3:44502719-44502738 | None:intergenic | 25.0% |
| ! | TGTATTTAGGCCTTAAATAA+TGG | + | chr7_3:44502826-44502845 | Msa1105710:intron | 25.0% |
| ! | TTCTATTTATTTGGCAATCA+TGG | + | chr7_3:44503038-44503057 | Msa1105710:CDS | 25.0% |
| ! | CAATCAATAGGTAATGAAAT+TGG | - | chr7_3:44503066-44503085 | None:intergenic | 25.0% |
| ! | CAATTTCATTACCTATTGAT+TGG | + | chr7_3:44503064-44503083 | Msa1105710:CDS | 25.0% |
| ! | GTTATATATTCTGTTAGGTT+TGG | + | chr7_3:44503233-44503252 | Msa1105710:intron | 25.0% |
| !!! | TTGACATGAGCTATTTTATA+GGG | + | chr7_3:44503362-44503381 | Msa1105710:intron | 25.0% |
| !! | TTGGATGATAATTGTGTTTT+TGG | + | chr7_3:44503595-44503614 | Msa1105710:CDS | 25.0% |
| !! | GTAACAAATTTTATGTTCTC+TGG | + | chr7_3:44503831-44503850 | Msa1105710:intron | 25.0% |
| !!! | TCTGGCTATTTTTTTTTAAC+AGG | + | chr7_3:44503849-44503868 | Msa1105710:intron | 25.0% |
| !! | TTTTCTCAAATTATTAGTGG+TGG | - | chr7_3:44504119-44504138 | None:intergenic | 25.0% |
| !!! | AATTAATGAAGGGTTTTATC+TGG | - | chr7_3:44502292-44502311 | None:intergenic | 25.0% |
| ! | TTATATGAATCACCTTTCAT+GGG | - | chr7_3:44502418-44502437 | None:intergenic | 25.0% |
| ! | TTTATATGAATCACCTTTCA+TGG | - | chr7_3:44502419-44502438 | None:intergenic | 25.0% |
| ! | TGATTCATATAAACAACAGT+TGG | + | chr7_3:44502426-44502445 | Msa1105710:intron | 25.0% |
| !! | CTTTTCCGATTTAGTATTTA+GGG | - | chr7_3:44502570-44502589 | None:intergenic | 25.0% |
| !! | ACTTTTCCGATTTAGTATTT+AGG | - | chr7_3:44502571-44502590 | None:intergenic | 25.0% |
| ! | TTAGATACATTAAAAGAAGG+TGG | + | chr7_3:44502620-44502639 | Msa1105710:intron | 25.0% |
| !! | TATTGATATCTTTTACAGGA+AGG | + | chr7_3:44502684-44502703 | Msa1105710:intron | 25.0% |
| !! | ATTTTGAATGTGTAATGACT+TGG | - | chr7_3:44502719-44502738 | None:intergenic | 25.0% |
| ! | TGTATTTAGGCCTTAAATAA+TGG | + | chr7_3:44502826-44502845 | Msa1105710:intron | 25.0% |
| ! | TTCTATTTATTTGGCAATCA+TGG | + | chr7_3:44503038-44503057 | Msa1105710:CDS | 25.0% |
| ! | CAATCAATAGGTAATGAAAT+TGG | - | chr7_3:44503066-44503085 | None:intergenic | 25.0% |
| ! | CAATTTCATTACCTATTGAT+TGG | + | chr7_3:44503064-44503083 | Msa1105710:CDS | 25.0% |
| ! | GTTATATATTCTGTTAGGTT+TGG | + | chr7_3:44503233-44503252 | Msa1105710:intron | 25.0% |
| !!! | TTGACATGAGCTATTTTATA+GGG | + | chr7_3:44503362-44503381 | Msa1105710:intron | 25.0% |
| !! | TTGGATGATAATTGTGTTTT+TGG | + | chr7_3:44503595-44503614 | Msa1105710:CDS | 25.0% |
| !! | GTAACAAATTTTATGTTCTC+TGG | + | chr7_3:44503831-44503850 | Msa1105710:intron | 25.0% |
| !!! | TCTGGCTATTTTTTTTTAAC+AGG | + | chr7_3:44503849-44503868 | Msa1105710:intron | 25.0% |
| !! | TTTTCTCAAATTATTAGTGG+TGG | - | chr7_3:44504119-44504138 | None:intergenic | 25.0% |
| ! | TAACTAGTTCTTCATAGCAA+TGG | + | chr7_3:44502336-44502355 | Msa1105710:exon | 30.0% |
| ACAAACAGTATTCATATCCA+TGG | - | chr7_3:44502377-44502396 | None:intergenic | 30.0% | |
| TTTAGAAAACCATCTCTAGT+TGG | + | chr7_3:44502536-44502555 | Msa1105710:intron | 30.0% | |
| TTCTTGCTGACCATTATTTA+AGG | - | chr7_3:44502839-44502858 | None:intergenic | 30.0% | |
| TTGCCACGTTTCTATTTATT+TGG | + | chr7_3:44503029-44503048 | Msa1105710:CDS | 30.0% | |
| TTGCCAAATAAATAGAAACG+TGG | - | chr7_3:44503035-44503054 | None:intergenic | 30.0% | |
| ! | GGTTGGTTATATATTCTGTT+AGG | + | chr7_3:44503228-44503247 | Msa1105710:intron | 30.0% |
| !! | CTTGACATGAGCTATTTTAT+AGG | + | chr7_3:44503361-44503380 | Msa1105710:intron | 30.0% |
| ! | GTGTCAATGTTGATGAAATT+TGG | - | chr7_3:44503547-44503566 | None:intergenic | 30.0% |
| ACATTTAAAGACCCTACAAA+AGG | + | chr7_3:44503565-44503584 | Msa1105710:CDS | 30.0% | |
| ! | CCAACAAATATCCTTTTGTA+GGG | - | chr7_3:44503579-44503598 | None:intergenic | 30.0% |
| ! | TCCAACAAATATCCTTTTGT+AGG | - | chr7_3:44503580-44503599 | None:intergenic | 30.0% |
| AATAGGGACAGGATTTATTA+TGG | - | chr7_3:44503671-44503690 | None:intergenic | 30.0% | |
| TTTGCAAAATTTCCAGCTAT+GGG | - | chr7_3:44503695-44503714 | None:intergenic | 30.0% | |
| ATTTGCAAAATTTCCAGCTA+TGG | - | chr7_3:44503696-44503715 | None:intergenic | 30.0% | |
| AAATTTAGACAAGTACGAGT+CGG | + | chr7_3:44503726-44503745 | Msa1105710:CDS | 30.0% | |
| !! | TCTTATTACTAGCTTGTTGT+AGG | + | chr7_3:44503807-44503826 | Msa1105710:intron | 30.0% |
| ! | GAAAGTGTAAGTCCATATAT+AGG | + | chr7_3:44504029-44504048 | Msa1105710:CDS | 30.0% |
| ! | TGGGTACTAACACATATTTT+TGG | - | chr7_3:44504303-44504322 | None:intergenic | 30.0% |
| ! | TAACTAGTTCTTCATAGCAA+TGG | + | chr7_3:44502336-44502355 | Msa1105710:exon | 30.0% |
| ACAAACAGTATTCATATCCA+TGG | - | chr7_3:44502377-44502396 | None:intergenic | 30.0% | |
| TTTAGAAAACCATCTCTAGT+TGG | + | chr7_3:44502536-44502555 | Msa1105710:intron | 30.0% | |
| TTCTTGCTGACCATTATTTA+AGG | - | chr7_3:44502839-44502858 | None:intergenic | 30.0% | |
| TTGCCACGTTTCTATTTATT+TGG | + | chr7_3:44503029-44503048 | Msa1105710:CDS | 30.0% | |
| TTGCCAAATAAATAGAAACG+TGG | - | chr7_3:44503035-44503054 | None:intergenic | 30.0% | |
| ! | GGTTGGTTATATATTCTGTT+AGG | + | chr7_3:44503228-44503247 | Msa1105710:intron | 30.0% |
| !! | CTTGACATGAGCTATTTTAT+AGG | + | chr7_3:44503361-44503380 | Msa1105710:intron | 30.0% |
| ! | GTGTCAATGTTGATGAAATT+TGG | - | chr7_3:44503547-44503566 | None:intergenic | 30.0% |
| ACATTTAAAGACCCTACAAA+AGG | + | chr7_3:44503565-44503584 | Msa1105710:CDS | 30.0% | |
| ! | CCAACAAATATCCTTTTGTA+GGG | - | chr7_3:44503579-44503598 | None:intergenic | 30.0% |
| ! | TCCAACAAATATCCTTTTGT+AGG | - | chr7_3:44503580-44503599 | None:intergenic | 30.0% |
| AATAGGGACAGGATTTATTA+TGG | - | chr7_3:44503671-44503690 | None:intergenic | 30.0% | |
| TTTGCAAAATTTCCAGCTAT+GGG | - | chr7_3:44503695-44503714 | None:intergenic | 30.0% | |
| ATTTGCAAAATTTCCAGCTA+TGG | - | chr7_3:44503696-44503715 | None:intergenic | 30.0% | |
| AAATTTAGACAAGTACGAGT+CGG | + | chr7_3:44503726-44503745 | Msa1105710:CDS | 30.0% | |
| !! | TCTTATTACTAGCTTGTTGT+AGG | + | chr7_3:44503807-44503826 | Msa1105710:intron | 30.0% |
| ! | GAAAGTGTAAGTCCATATAT+AGG | + | chr7_3:44504029-44504048 | Msa1105710:CDS | 30.0% |
| ! | TGGGTACTAACACATATTTT+TGG | - | chr7_3:44504303-44504322 | None:intergenic | 30.0% |
| !! | AGGGTTTTATCTGGATTTTG+AGG | - | chr7_3:44502283-44502302 | None:intergenic | 35.0% |
| GCTTGCCCTAAATACTAAAT+CGG | + | chr7_3:44502562-44502581 | Msa1105710:intron | 35.0% | |
| ! | TTGAATGTGTAATGACTTGG+CGG | - | chr7_3:44502716-44502735 | None:intergenic | 35.0% |
| CTCCATTGAAAAATGTGTCT+CGG | + | chr7_3:44502766-44502785 | Msa1105710:CDS | 35.0% | |
| !! | TTCCGAGACACATTTTTCAA+TGG | - | chr7_3:44502771-44502790 | None:intergenic | 35.0% |
| TTAAACTTTCGTTCATGCGT+AGG | + | chr7_3:44502962-44502981 | Msa1105710:intron | 35.0% | |
| GATGAATACGTTACAACTCA+AGG | + | chr7_3:44503132-44503151 | Msa1105710:CDS | 35.0% | |
| CCCTACAAAAGGATATTTGT+TGG | + | chr7_3:44503576-44503595 | Msa1105710:CDS | 35.0% | |
| !!! | TAATTGTGTTTTTGGAGCTG+AGG | + | chr7_3:44503603-44503622 | Msa1105710:CDS | 35.0% |
| ATTTCCAGCTATGGGAAATA+GGG | - | chr7_3:44503687-44503706 | None:intergenic | 35.0% | |
| AATTTCCAGCTATGGGAAAT+AGG | - | chr7_3:44503688-44503707 | None:intergenic | 35.0% | |
| TTTATAGTCTCCAGCTACAA+AGG | - | chr7_3:44503755-44503774 | None:intergenic | 35.0% | |
| TTGTAGCTGGAGACTATAAA+TGG | + | chr7_3:44503755-44503774 | Msa1105710:CDS | 35.0% | |
| !! | CGAGAATTTTAGTGTCAGAT+GGG | - | chr7_3:44503958-44503977 | None:intergenic | 35.0% |
| !! | ACGAGAATTTTAGTGTCAGA+TGG | - | chr7_3:44503959-44503978 | None:intergenic | 35.0% |
| ATCTGACACTAAAATTCTCG+TGG | + | chr7_3:44503958-44503977 | Msa1105710:CDS | 35.0% | |
| ! | TTTCCCACAAATTTGGTCTT+TGG | - | chr7_3:44503999-44504018 | None:intergenic | 35.0% |
| CAACATGTTTCCCACAAATT+TGG | - | chr7_3:44504006-44504025 | None:intergenic | 35.0% | |
| ATGGATACGAACACAAACAT+CGG | + | chr7_3:44504068-44504087 | Msa1105710:CDS | 35.0% | |
| TCTCAAATTATTAGTGGTGG+CGG | - | chr7_3:44504116-44504135 | None:intergenic | 35.0% | |
| !! | AGGGTTTTATCTGGATTTTG+AGG | - | chr7_3:44502283-44502302 | None:intergenic | 35.0% |
| GCTTGCCCTAAATACTAAAT+CGG | + | chr7_3:44502562-44502581 | Msa1105710:intron | 35.0% | |
| ! | TTGAATGTGTAATGACTTGG+CGG | - | chr7_3:44502716-44502735 | None:intergenic | 35.0% |
| CTCCATTGAAAAATGTGTCT+CGG | + | chr7_3:44502766-44502785 | Msa1105710:CDS | 35.0% | |
| !! | TTCCGAGACACATTTTTCAA+TGG | - | chr7_3:44502771-44502790 | None:intergenic | 35.0% |
| TTAAACTTTCGTTCATGCGT+AGG | + | chr7_3:44502962-44502981 | Msa1105710:intron | 35.0% | |
| GATGAATACGTTACAACTCA+AGG | + | chr7_3:44503132-44503151 | Msa1105710:CDS | 35.0% | |
| CCCTACAAAAGGATATTTGT+TGG | + | chr7_3:44503576-44503595 | Msa1105710:CDS | 35.0% | |
| !!! | TAATTGTGTTTTTGGAGCTG+AGG | + | chr7_3:44503603-44503622 | Msa1105710:CDS | 35.0% |
| ATTTCCAGCTATGGGAAATA+GGG | - | chr7_3:44503687-44503706 | None:intergenic | 35.0% | |
| AATTTCCAGCTATGGGAAAT+AGG | - | chr7_3:44503688-44503707 | None:intergenic | 35.0% | |
| TTTATAGTCTCCAGCTACAA+AGG | - | chr7_3:44503755-44503774 | None:intergenic | 35.0% | |
| TTGTAGCTGGAGACTATAAA+TGG | + | chr7_3:44503755-44503774 | Msa1105710:CDS | 35.0% | |
| !! | CGAGAATTTTAGTGTCAGAT+GGG | - | chr7_3:44503958-44503977 | None:intergenic | 35.0% |
| !! | ACGAGAATTTTAGTGTCAGA+TGG | - | chr7_3:44503959-44503978 | None:intergenic | 35.0% |
| ATCTGACACTAAAATTCTCG+TGG | + | chr7_3:44503958-44503977 | Msa1105710:CDS | 35.0% | |
| ! | TTTCCCACAAATTTGGTCTT+TGG | - | chr7_3:44503999-44504018 | None:intergenic | 35.0% |
| CAACATGTTTCCCACAAATT+TGG | - | chr7_3:44504006-44504025 | None:intergenic | 35.0% | |
| ATGGATACGAACACAAACAT+CGG | + | chr7_3:44504068-44504087 | Msa1105710:CDS | 35.0% | |
| TCTCAAATTATTAGTGGTGG+CGG | - | chr7_3:44504116-44504135 | None:intergenic | 35.0% | |
| GGTTACTGTATGTTCTACCA+TGG | + | chr7_3:44502357-44502376 | Msa1105710:CDS | 40.0% | |
| GTCCTTCTCTTTGCTTTCTA+AGG | + | chr7_3:44502742-44502761 | Msa1105710:CDS | 40.0% | |
| !! | CGAGACACATTTTTCAATGG+AGG | - | chr7_3:44502768-44502787 | None:intergenic | 40.0% |
| TTGAAGCTGGAGGTTACAAA+TGG | + | chr7_3:44502795-44502814 | Msa1105710:CDS | 40.0% | |
| AGCTTGTCTATATACCCATC+TGG | + | chr7_3:44502985-44503004 | Msa1105710:CDS | 40.0% | |
| GCTTGTCTATATACCCATCT+GGG | + | chr7_3:44502986-44503005 | Msa1105710:CDS | 40.0% | |
| ! | GCATTGATCTCCCAATCAAT+AGG | - | chr7_3:44503078-44503097 | None:intergenic | 40.0% |
| AACATGCAGATGCATCTGTT+AGG | + | chr7_3:44503488-44503507 | Msa1105710:intron | 40.0% | |
| TTCATGTCCTGAAAACAGAG+TGG | + | chr7_3:44503515-44503534 | Msa1105710:CDS | 40.0% | |
| TCATGTCCTGAAAACAGAGT+GGG | + | chr7_3:44503516-44503535 | Msa1105710:CDS | 40.0% | |
| GTGAAGAAGACTGCCAATAA+AGG | + | chr7_3:44503634-44503653 | Msa1105710:CDS | 40.0% | |
| GGATAAGCAATCGCCTTTAT+TGG | - | chr7_3:44503650-44503669 | None:intergenic | 40.0% | |
| CGCAGAAGATAGCCTATATA+TGG | - | chr7_3:44504044-44504063 | None:intergenic | 40.0% | |
| TATACGTGTCTTTGTCGTGT+TGG | + | chr7_3:44504158-44504177 | Msa1105710:three_prime_UTR | 40.0% | |
| TCCTCACGTTATGTGTGTTT+CGG | - | chr7_3:44504211-44504230 | None:intergenic | 40.0% | |
| GGTTACTGTATGTTCTACCA+TGG | + | chr7_3:44502357-44502376 | Msa1105710:CDS | 40.0% | |
| GTCCTTCTCTTTGCTTTCTA+AGG | + | chr7_3:44502742-44502761 | Msa1105710:CDS | 40.0% | |
| !! | CGAGACACATTTTTCAATGG+AGG | - | chr7_3:44502768-44502787 | None:intergenic | 40.0% |
| TTGAAGCTGGAGGTTACAAA+TGG | + | chr7_3:44502795-44502814 | Msa1105710:CDS | 40.0% | |
| AGCTTGTCTATATACCCATC+TGG | + | chr7_3:44502985-44503004 | Msa1105710:CDS | 40.0% | |
| GCTTGTCTATATACCCATCT+GGG | + | chr7_3:44502986-44503005 | Msa1105710:CDS | 40.0% | |
| ! | GCATTGATCTCCCAATCAAT+AGG | - | chr7_3:44503078-44503097 | None:intergenic | 40.0% |
| AACATGCAGATGCATCTGTT+AGG | + | chr7_3:44503488-44503507 | Msa1105710:intron | 40.0% | |
| TTCATGTCCTGAAAACAGAG+TGG | + | chr7_3:44503515-44503534 | Msa1105710:CDS | 40.0% | |
| TCATGTCCTGAAAACAGAGT+GGG | + | chr7_3:44503516-44503535 | Msa1105710:CDS | 40.0% | |
| GTGAAGAAGACTGCCAATAA+AGG | + | chr7_3:44503634-44503653 | Msa1105710:CDS | 40.0% | |
| GGATAAGCAATCGCCTTTAT+TGG | - | chr7_3:44503650-44503669 | None:intergenic | 40.0% | |
| CGCAGAAGATAGCCTATATA+TGG | - | chr7_3:44504044-44504063 | None:intergenic | 40.0% | |
| TATACGTGTCTTTGTCGTGT+TGG | + | chr7_3:44504158-44504177 | Msa1105710:three_prime_UTR | 40.0% | |
| TCCTCACGTTATGTGTGTTT+CGG | - | chr7_3:44504211-44504230 | None:intergenic | 40.0% | |
| ATGGGTGTGGTAGACAACAA+TGG | - | chr7_3:44502400-44502419 | None:intergenic | 45.0% | |
| TTGTCTACCACACCCATGAA+AGG | + | chr7_3:44502403-44502422 | Msa1105710:CDS | 45.0% | |
| TGAATCACCTTTCATGGGTG+TGG | - | chr7_3:44502413-44502432 | None:intergenic | 45.0% | |
| GGCCTTAGAAAGCAAAGAGA+AGG | - | chr7_3:44502747-44502766 | None:intergenic | 45.0% | |
| CATGTCCTGAAAACAGAGTG+GGG | + | chr7_3:44503517-44503536 | Msa1105710:CDS | 45.0% | |
| ! | GAATACCCCACTCTGTTTTC+AGG | - | chr7_3:44503525-44503544 | None:intergenic | 45.0% |
| AAGCTCCGTTTATACCCCAA+TGG | + | chr7_3:44503872-44503891 | Msa1105710:CDS | 45.0% | |
| CGACTCCATTGGGGTATAAA+CGG | - | chr7_3:44503880-44503899 | None:intergenic | 45.0% | |
| TTTCCCTCAACGACTCCATT+GGG | - | chr7_3:44503890-44503909 | None:intergenic | 45.0% | |
| AATGGAGTCGTTGAGGGAAA+GGG | + | chr7_3:44503890-44503909 | Msa1105710:CDS | 45.0% | |
| GCGCCAAAGACCAAATTTGT+GGG | + | chr7_3:44503993-44504012 | Msa1105710:CDS | 45.0% | |
| ! | CGTTATGTGTGTTTCGGTGT+CGG | - | chr7_3:44504205-44504224 | None:intergenic | 45.0% |
| ACCGAAACACACATAACGTG+AGG | + | chr7_3:44504207-44504226 | Msa1105710:three_prime_UTR | 45.0% | |
| CATAACGTGAGGATTGTTCG+TGG | + | chr7_3:44504218-44504237 | Msa1105710:three_prime_UTR | 45.0% | |
| ATGGGTGTGGTAGACAACAA+TGG | - | chr7_3:44502400-44502419 | None:intergenic | 45.0% | |
| TTGTCTACCACACCCATGAA+AGG | + | chr7_3:44502403-44502422 | Msa1105710:CDS | 45.0% | |
| TGAATCACCTTTCATGGGTG+TGG | - | chr7_3:44502413-44502432 | None:intergenic | 45.0% | |
| GGCCTTAGAAAGCAAAGAGA+AGG | - | chr7_3:44502747-44502766 | None:intergenic | 45.0% | |
| CATGTCCTGAAAACAGAGTG+GGG | + | chr7_3:44503517-44503536 | Msa1105710:CDS | 45.0% | |
| ! | GAATACCCCACTCTGTTTTC+AGG | - | chr7_3:44503525-44503544 | None:intergenic | 45.0% |
| AAGCTCCGTTTATACCCCAA+TGG | + | chr7_3:44503872-44503891 | Msa1105710:CDS | 45.0% | |
| CGACTCCATTGGGGTATAAA+CGG | - | chr7_3:44503880-44503899 | None:intergenic | 45.0% | |
| TTTCCCTCAACGACTCCATT+GGG | - | chr7_3:44503890-44503909 | None:intergenic | 45.0% | |
| AATGGAGTCGTTGAGGGAAA+GGG | + | chr7_3:44503890-44503909 | Msa1105710:CDS | 45.0% | |
| GCGCCAAAGACCAAATTTGT+GGG | + | chr7_3:44503993-44504012 | Msa1105710:CDS | 45.0% | |
| ! | CGTTATGTGTGTTTCGGTGT+CGG | - | chr7_3:44504205-44504224 | None:intergenic | 45.0% |
| ACCGAAACACACATAACGTG+AGG | + | chr7_3:44504207-44504226 | Msa1105710:three_prime_UTR | 45.0% | |
| CATAACGTGAGGATTGTTCG+TGG | + | chr7_3:44504218-44504237 | Msa1105710:three_prime_UTR | 45.0% | |
| GCAAGCACACCAACTAGAGA+TGG | - | chr7_3:44502548-44502567 | None:intergenic | 50.0% | |
| ! | GTCTCGGAAGAGTTTGAAGC+TGG | + | chr7_3:44502782-44502801 | Msa1105710:CDS | 50.0% |
| ! | TCGGAAGAGTTTGAAGCTGG+AGG | + | chr7_3:44502785-44502804 | Msa1105710:CDS | 50.0% |
| TCCTCTCTGTGTTCCCAGAT+GGG | - | chr7_3:44503002-44503021 | None:intergenic | 50.0% | |
| TTCCTCTCTGTGTTCCCAGA+TGG | - | chr7_3:44503003-44503022 | None:intergenic | 50.0% | |
| TCTGGGAACACAGAGAGGAA+TGG | + | chr7_3:44503003-44503022 | Msa1105710:CDS | 50.0% | |
| CAGCTATGGGAAATAGGGAC+AGG | - | chr7_3:44503682-44503701 | None:intergenic | 50.0% | |
| CTGTCCCTATTTCCCATAGC+TGG | + | chr7_3:44503680-44503699 | Msa1105710:CDS | 50.0% | |
| GAGTCGGAATCCTTTGTAGC+TGG | + | chr7_3:44503742-44503761 | Msa1105710:CDS | 50.0% | |
| ATACCCCAATGGAGTCGTTG+AGG | + | chr7_3:44503883-44503902 | Msa1105710:CDS | 50.0% | |
| TACCCCAATGGAGTCGTTGA+GGG | + | chr7_3:44503884-44503903 | Msa1105710:CDS | 50.0% | |
| TTCCCTCAACGACTCCATTG+GGG | - | chr7_3:44503889-44503908 | None:intergenic | 50.0% | |
| CTTTCCCTCAACGACTCCAT+TGG | - | chr7_3:44503891-44503910 | None:intergenic | 50.0% | |
| CAATGGAGTCGTTGAGGGAA+AGG | + | chr7_3:44503889-44503908 | Msa1105710:CDS | 50.0% | |
| CGCGCCAAAGACCAAATTTG+TGG | + | chr7_3:44503992-44504011 | Msa1105710:CDS | 50.0% | |
| AGGCTATCTTCTGCGAAGCA+TGG | + | chr7_3:44504049-44504068 | Msa1105710:CDS | 50.0% | |
| ACGTGAGGATTGTTCGTGGT+AGG | + | chr7_3:44504222-44504241 | Msa1105710:three_prime_UTR | 50.0% | |
| GCAAGCACACCAACTAGAGA+TGG | - | chr7_3:44502548-44502567 | None:intergenic | 50.0% | |
| ! | GTCTCGGAAGAGTTTGAAGC+TGG | + | chr7_3:44502782-44502801 | Msa1105710:CDS | 50.0% |
| ! | TCGGAAGAGTTTGAAGCTGG+AGG | + | chr7_3:44502785-44502804 | Msa1105710:CDS | 50.0% |
| TCCTCTCTGTGTTCCCAGAT+GGG | - | chr7_3:44503002-44503021 | None:intergenic | 50.0% | |
| TTCCTCTCTGTGTTCCCAGA+TGG | - | chr7_3:44503003-44503022 | None:intergenic | 50.0% | |
| TCTGGGAACACAGAGAGGAA+TGG | + | chr7_3:44503003-44503022 | Msa1105710:CDS | 50.0% | |
| CAGCTATGGGAAATAGGGAC+AGG | - | chr7_3:44503682-44503701 | None:intergenic | 50.0% | |
| CTGTCCCTATTTCCCATAGC+TGG | + | chr7_3:44503680-44503699 | Msa1105710:CDS | 50.0% | |
| GAGTCGGAATCCTTTGTAGC+TGG | + | chr7_3:44503742-44503761 | Msa1105710:CDS | 50.0% | |
| ATACCCCAATGGAGTCGTTG+AGG | + | chr7_3:44503883-44503902 | Msa1105710:CDS | 50.0% | |
| TACCCCAATGGAGTCGTTGA+GGG | + | chr7_3:44503884-44503903 | Msa1105710:CDS | 50.0% | |
| TTCCCTCAACGACTCCATTG+GGG | - | chr7_3:44503889-44503908 | None:intergenic | 50.0% | |
| CTTTCCCTCAACGACTCCAT+TGG | - | chr7_3:44503891-44503910 | None:intergenic | 50.0% | |
| CAATGGAGTCGTTGAGGGAA+AGG | + | chr7_3:44503889-44503908 | Msa1105710:CDS | 50.0% | |
| CGCGCCAAAGACCAAATTTG+TGG | + | chr7_3:44503992-44504011 | Msa1105710:CDS | 50.0% | |
| AGGCTATCTTCTGCGAAGCA+TGG | + | chr7_3:44504049-44504068 | Msa1105710:CDS | 50.0% | |
| ACGTGAGGATTGTTCGTGGT+AGG | + | chr7_3:44504222-44504241 | Msa1105710:three_prime_UTR | 50.0% | |
| ACCCATCTGGGAACACAGAG+AGG | + | chr7_3:44502998-44503017 | Msa1105710:CDS | 55.0% | |
| ACCCATCTGGGAACACAGAG+AGG | + | chr7_3:44502998-44503017 | Msa1105710:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 44502240 | 44504374 | 44502240 | ID=Msa1105710;Name=Msa1105710 |
| chr7_3 | mRNA | 44502240 | 44504374 | 44502240 | ID=Msa1105710-mRNA-1;Parent=Msa1105710;Name=Msa1105710-mRNA-1;_AED=0.21;_eAED=0.21;_QI=115|1|1|1|1|1|5|278|286 |
| chr7_3 | exon | 44502240 | 44502424 | 44502240 | ID=Msa1105710-mRNA-1:exon:9176;Parent=Msa1105710-mRNA-1 |
| chr7_3 | exon | 44502702 | 44502816 | 44502702 | ID=Msa1105710-mRNA-1:exon:9177;Parent=Msa1105710-mRNA-1 |
| chr7_3 | exon | 44502984 | 44503153 | 44502984 | ID=Msa1105710-mRNA-1:exon:9178;Parent=Msa1105710-mRNA-1 |
| chr7_3 | exon | 44503497 | 44503776 | 44503497 | ID=Msa1105710-mRNA-1:exon:9179;Parent=Msa1105710-mRNA-1 |
| chr7_3 | exon | 44503871 | 44504374 | 44503871 | ID=Msa1105710-mRNA-1:exon:9180;Parent=Msa1105710-mRNA-1 |
| chr7_3 | five_prime_UTR | 44502240 | 44502354 | 44502240 | ID=Msa1105710-mRNA-1:five_prime_utr;Parent=Msa1105710-mRNA-1 |
| chr7_3 | CDS | 44502355 | 44502424 | 44502355 | ID=Msa1105710-mRNA-1:cds;Parent=Msa1105710-mRNA-1 |
| chr7_3 | CDS | 44502702 | 44502816 | 44502702 | ID=Msa1105710-mRNA-1:cds;Parent=Msa1105710-mRNA-1 |
| chr7_3 | CDS | 44502984 | 44503153 | 44502984 | ID=Msa1105710-mRNA-1:cds;Parent=Msa1105710-mRNA-1 |
| chr7_3 | CDS | 44503497 | 44503776 | 44503497 | ID=Msa1105710-mRNA-1:cds;Parent=Msa1105710-mRNA-1 |
| chr7_3 | CDS | 44503871 | 44504096 | 44503871 | ID=Msa1105710-mRNA-1:cds;Parent=Msa1105710-mRNA-1 |
| chr7_3 | three_prime_UTR | 44504097 | 44504374 | 44504097 | ID=Msa1105710-mRNA-1:three_prime_utr;Parent=Msa1105710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
