Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107040 | KEH23035.1 | 96.652 | 448 | 12 | 1 | 1 | 445 | 1 | 448 | 0.0 | 875 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107040 | sp|B9DFK5|RETIC_ARATH | 61.148 | 453 | 147 | 6 | 1 | 445 | 1 | 432 | 8.35e-174 | 496 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107040 | A0A072UB17 | 96.652 | 448 | 12 | 1 | 1 | 445 | 1 | 448 | 0.0 | 875 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0616240 | Msa1107040 | 0.804086 | 2.557234e-49 | -8.615850e-47 |
| Msa0699570 | Msa1107040 | 0.800055 | 1.724367e-48 | -8.615850e-47 |
| Msa1022970 | Msa1107040 | 0.887392 | 1.485422e-72 | -8.615850e-47 |
| Msa1061720 | Msa1107040 | 0.860790 | 1.615069e-63 | -8.615850e-47 |
| Msa1107040 | Msa1150500 | 0.833622 | 4.797112e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107040 | MtrunA17_Chr7g0240091 | 96.652 | 448 | 12 | 1 | 1 | 445 | 1 | 448 | 0.0 | 873 |
| Msa1107040 | MtrunA17_Chr2g0320711 | 74.476 | 286 | 73 | 0 | 160 | 445 | 150 | 435 | 4.46e-162 | 464 |
| Msa1107040 | MtrunA17_Chr4g0020011 | 31.023 | 303 | 184 | 9 | 150 | 445 | 93 | 377 | 1.18e-35 | 135 |
| Msa1107040 | MtrunA17_Chr4g0039291 | 30.841 | 321 | 191 | 9 | 132 | 445 | 92 | 388 | 2.94e-33 | 129 |
| Msa1107040 | MtrunA17_Chr3g0090071 | 30.584 | 291 | 181 | 8 | 161 | 445 | 112 | 387 | 8.99e-30 | 119 |
| Msa1107040 | MtrunA17_Chr7g0245291 | 33.188 | 229 | 133 | 8 | 220 | 445 | 114 | 325 | 2.53e-27 | 112 |
| Msa1107040 | MtrunA17_Chr7g0245261 | 34.061 | 229 | 131 | 8 | 220 | 445 | 107 | 318 | 3.91e-25 | 105 |
| Msa1107040 | MtrunA17_Chr3g0114241 | 26.882 | 279 | 194 | 5 | 174 | 445 | 441 | 716 | 1.28e-24 | 107 |
| Msa1107040 | MtrunA17_Chr2g0318431 | 30.137 | 219 | 137 | 5 | 222 | 438 | 241 | 445 | 1.83e-19 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107040 | AT2G37860.3 | 61.148 | 453 | 147 | 6 | 1 | 445 | 1 | 432 | 8.49e-175 | 496 |
| Msa1107040 | AT2G37860.4 | 61.148 | 453 | 147 | 6 | 1 | 445 | 1 | 432 | 8.49e-175 | 496 |
| Msa1107040 | AT5G22790.1 | 74.662 | 296 | 74 | 1 | 151 | 445 | 138 | 433 | 2.57e-168 | 480 |
| Msa1107040 | AT2G37860.2 | 57.065 | 368 | 129 | 6 | 1 | 360 | 1 | 347 | 3.46e-119 | 352 |
| Msa1107040 | AT2G37860.1 | 57.065 | 368 | 129 | 6 | 1 | 360 | 1 | 347 | 3.46e-119 | 352 |
| Msa1107040 | AT5G12470.1 | 29.373 | 303 | 193 | 7 | 149 | 445 | 96 | 383 | 1.21e-33 | 130 |
| Msa1107040 | AT3G08640.1 | 34.008 | 247 | 141 | 8 | 203 | 445 | 94 | 322 | 9.81e-32 | 124 |
| Msa1107040 | AT3G08630.1 | 34.061 | 229 | 133 | 6 | 220 | 445 | 106 | 319 | 5.68e-31 | 122 |
| Msa1107040 | AT3G56140.2 | 31.667 | 240 | 143 | 6 | 219 | 445 | 258 | 489 | 2.56e-25 | 108 |
| Msa1107040 | AT3G56140.1 | 31.799 | 239 | 142 | 6 | 220 | 445 | 478 | 708 | 3.82e-25 | 108 |
| Msa1107040 | AT3G56140.3 | 31.799 | 239 | 142 | 6 | 220 | 445 | 478 | 708 | 3.82e-25 | 108 |
| Msa1107040 | AT2G40400.2 | 29.371 | 286 | 178 | 8 | 174 | 445 | 424 | 699 | 1.89e-24 | 107 |
| Msa1107040 | AT2G40400.1 | 29.371 | 286 | 178 | 8 | 174 | 445 | 424 | 699 | 1.89e-24 | 107 |
| Msa1107040 | AT5G24690.1 | 31.068 | 206 | 130 | 3 | 222 | 427 | 240 | 433 | 1.06e-20 | 95.1 |
| Msa1107040 | AT2G40400.3 | 29.237 | 236 | 144 | 7 | 174 | 395 | 424 | 650 | 1.80e-17 | 85.5 |
Find 136 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACCTCAAGAAAATTTA+TGG | 0.120240 | 7_3:-48197377 | None:intergenic |
| GTTGCTTCTTCTTAGATATT+TGG | 0.155876 | 7_3:+48193464 | Msa1107040:CDS |
| CGGGTTGTTCATCGAATTTC+GGG | 0.167573 | 7_3:+48192890 | Msa1107040:CDS |
| GGGAAAGGAACAGAAAATTT+TGG | 0.206843 | 7_3:+48193185 | Msa1107040:CDS |
| TTTGAAGAGTGCTGCTCTTT+GGG | 0.218226 | 7_3:+48196151 | Msa1107040:CDS |
| CCTTAATCTTTGGTCATTAT+AGG | 0.231950 | 7_3:-48197428 | None:intergenic |
| CCTATAATGACCAAAGATTA+AGG | 0.257079 | 7_3:+48197428 | Msa1107040:three_prime_UTR |
| AAAAGAGAGGCAAAGACTTT+TGG | 0.264746 | 7_3:+48194231 | Msa1107040:CDS |
| GCGGGTTGTTCATCGAATTT+CGG | 0.269265 | 7_3:+48192889 | Msa1107040:CDS |
| AACAGTAGACTTCATCATTA+AGG | 0.272535 | 7_3:-48197529 | None:intergenic |
| AGGAAAACCATCAATATCTA+AGG | 0.274008 | 7_3:+48194343 | Msa1107040:CDS |
| GGATTTGGATGTGGTATTAT+AGG | 0.277977 | 7_3:+48194806 | Msa1107040:CDS |
| TCTTAGATATTTGGATTTAG+AGG | 0.309246 | 7_3:+48193473 | Msa1107040:CDS |
| ATCCATGCACCCTTAATCTT+TGG | 0.311778 | 7_3:-48197438 | None:intergenic |
| ATTTGAGGTGTGATCTGTTT+TGG | 0.324985 | 7_3:+48192728 | Msa1107040:five_prime_UTR |
| GTCGGGAAAGAAGCTGGTTT+GGG | 0.334014 | 7_3:+48192931 | Msa1107040:CDS |
| TCCATACAGGTGTGTTCCTT+GGG | 0.346921 | 7_3:+48197112 | Msa1107040:intron |
| GCGGGAGATGGTGGCGGTGG+CGG | 0.363844 | 7_3:+48193300 | Msa1107040:CDS |
| CACTTGTTCACACAAATTGA+TGG | 0.367031 | 7_3:-48193030 | None:intergenic |
| ATGTATGCAGGTGTTGGATT+TGG | 0.374444 | 7_3:+48194791 | Msa1107040:CDS |
| AAATTTCTACCTCAGGTTCA+TGG | 0.374495 | 7_3:+48197404 | Msa1107040:three_prime_UTR |
| AGGAATCCCTTAGATATTGA+TGG | 0.391446 | 7_3:-48194350 | None:intergenic |
| TGTAAGTACGATAGAATTAT+CGG | 0.396315 | 7_3:+48193140 | Msa1107040:CDS |
| TATGTTGCAGATCTTCTTGT+TGG | 0.403747 | 7_3:+48194269 | Msa1107040:CDS |
| ATCTAAGAAGAAGCAACTTC+GGG | 0.404666 | 7_3:-48193458 | None:intergenic |
| ATCATCATTTCCAACACTCT+TGG | 0.405442 | 7_3:-48193223 | None:intergenic |
| TGTCGGGAAAGAAGCTGGTT+TGG | 0.407345 | 7_3:+48192930 | Msa1107040:CDS |
| GATAATGGTGTTGTGTTTGA+TGG | 0.408754 | 7_3:+48193243 | Msa1107040:CDS |
| CTTATGCAGCTTTACCTAGC+AGG | 0.418534 | 7_3:+48194390 | Msa1107040:CDS |
| GTTTATCTGTATTGTTGAGC+TGG | 0.423097 | 7_3:+48192750 | Msa1107040:five_prime_UTR |
| GGAGATGGTGGCGGTGGCGG+TGG | 0.426302 | 7_3:+48193303 | Msa1107040:CDS |
| ATCCATACAGGTGTGTTCCT+TGG | 0.428953 | 7_3:+48197111 | Msa1107040:intron |
| AGGTGATAGTGTTGTGGGAA+AGG | 0.433431 | 7_3:+48193170 | Msa1107040:CDS |
| GACGGTTGTTAATGTTGCTT+TGG | 0.439449 | 7_3:+48194292 | Msa1107040:CDS |
| GGAGCGGGAGATGGTGGCGG+TGG | 0.441714 | 7_3:+48193297 | Msa1107040:CDS |
| TTGGCACCTTATGCTCGAAT+AGG | 0.444276 | 7_3:+48194323 | Msa1107040:CDS |
| GTGCATGGATTGGTTTAGAA+AGG | 0.454355 | 7_3:+48197451 | Msa1107040:three_prime_UTR |
| TGTTGCTTTGGTTGGAATGT+TGG | 0.454554 | 7_3:+48194304 | Msa1107040:CDS |
| GTTGTTAATGTTGCTTTGGT+TGG | 0.456847 | 7_3:+48194296 | Msa1107040:CDS |
| TATTTATTAAGAATAAGAAT+TGG | 0.456857 | 7_3:+48192796 | Msa1107040:five_prime_UTR |
| AGTGGTGGTAATGGAAGCTT+TGG | 0.457520 | 7_3:+48193267 | Msa1107040:CDS |
| AAGATTAAGGGTGCATGGAT+TGG | 0.457694 | 7_3:+48197441 | Msa1107040:three_prime_UTR |
| GAAGCATAAATTTCTACCTC+AGG | 0.460541 | 7_3:+48197397 | Msa1107040:three_prime_UTR |
| ACTGTGAAAGCGAGAGCAAC+TGG | 0.461185 | 7_3:-48197216 | None:intergenic |
| AAGGTTAATTACTAAAATAG+AGG | 0.468379 | 7_3:-48197510 | None:intergenic |
| CATGCCACCGTAAACATTGT+TGG | 0.468817 | 7_3:-48197253 | None:intergenic |
| GTGGCATGCAGTTTGTTGAC+TGG | 0.470248 | 7_3:+48197268 | Msa1107040:CDS |
| AGCATCGCCAATGGCAAAGC+AGG | 0.473131 | 7_3:+48197188 | Msa1107040:CDS |
| AGCTTTGGAAGTGGTGGAGC+GGG | 0.473884 | 7_3:+48193282 | Msa1107040:CDS |
| GCAGGTGTTGGATTTGGATG+TGG | 0.479236 | 7_3:+48194797 | Msa1107040:CDS |
| TATCTAAGAAGAAGCAACTT+CGG | 0.479521 | 7_3:-48193459 | None:intergenic |
| TCAATATCTAAGGGATTCCT+TGG | 0.479546 | 7_3:+48194353 | Msa1107040:CDS |
| TGATCATGTTTGCAATGCCT+TGG | 0.481394 | 7_3:-48194829 | None:intergenic |
| TGCAGTTTGTTGACTGGGCT+AGG | 0.482177 | 7_3:+48197274 | Msa1107040:CDS |
| GGAAGTGGTGGAGCGGGAGA+TGG | 0.482587 | 7_3:+48193288 | Msa1107040:CDS |
| CATCAATGGACTGGAACGTT+TGG | 0.482709 | 7_3:+48197161 | Msa1107040:CDS |
| GGTGGAACCTGCTTTGCCAT+TGG | 0.486100 | 7_3:-48197195 | None:intergenic |
| GGTGGAGCGGGAGATGGTGG+CGG | 0.488183 | 7_3:+48193294 | Msa1107040:CDS |
| GGTGTTGTGTTTGATGGTAG+TGG | 0.488998 | 7_3:+48193249 | Msa1107040:CDS |
| ACTTGGAACATACTTCTTCA+AGG | 0.489407 | 7_3:+48194675 | Msa1107040:CDS |
| CTCTTCAAAAGAGGTGGTAC+AGG | 0.498159 | 7_3:-48196137 | None:intergenic |
| GCAGCCTCCAACATATCAAA+AGG | 0.499434 | 7_3:-48193420 | None:intergenic |
| TATGCTTCGCAATCGAATGC+TGG | 0.506531 | 7_3:+48193941 | Msa1107040:CDS |
| ACGCGATACCAGGTCATCAA+TGG | 0.507241 | 7_3:+48197147 | Msa1107040:CDS |
| GTAAGTGTCGGGAAAGAAGC+TGG | 0.512196 | 7_3:+48192925 | Msa1107040:CDS |
| GGTATAATGTATGCAGGTGT+TGG | 0.513052 | 7_3:+48194785 | Msa1107040:CDS |
| GTTGCTCTCGCTTTCACAGT+TGG | 0.513774 | 7_3:+48197219 | Msa1107040:CDS |
| TTGAAGAGTGCTGCTCTTTG+GGG | 0.513979 | 7_3:+48196152 | Msa1107040:CDS |
| AGTGGTGGAGCGGGAGATGG+TGG | 0.514016 | 7_3:+48193291 | Msa1107040:CDS |
| ATGTTGCAGATCTTCTTGTT+GGG | 0.519882 | 7_3:+48194270 | Msa1107040:CDS |
| TTTGATGGTAGTGGTGGTAA+TGG | 0.523492 | 7_3:+48193258 | Msa1107040:CDS |
| TGGCTCGAGTTGTAAGTGTC+GGG | 0.526472 | 7_3:+48192914 | Msa1107040:CDS |
| TGTGTGAACAAGTGCGGTGG+TGG | 0.526944 | 7_3:+48193039 | Msa1107040:CDS |
| TACGATAGAATTATCGGAAG+GGG | 0.527105 | 7_3:+48193146 | Msa1107040:CDS |
| ATCTTCAAACACGCGATACC+AGG | 0.527301 | 7_3:+48197137 | Msa1107040:CDS |
| GACCAAAGATTAAGGGTGCA+TGG | 0.530261 | 7_3:+48197436 | Msa1107040:three_prime_UTR |
| CTATAATGACCAAAGATTAA+GGG | 0.533190 | 7_3:+48197429 | Msa1107040:three_prime_UTR |
| GATCTCATGGCAAATCCTAA+AGG | 0.535500 | 7_3:-48193912 | None:intergenic |
| TGATGAGGTATTGAGAGAGA+CGG | 0.536208 | 7_3:+48193377 | Msa1107040:CDS |
| CCTCCAACATATCAAAAGGA+AGG | 0.542894 | 7_3:-48193416 | None:intergenic |
| AGTGTTGGAAATGATGATAA+TGG | 0.543927 | 7_3:+48193228 | Msa1107040:CDS |
| GTTGGAGGCTGCTAAGACTG+TGG | 0.546763 | 7_3:+48193431 | Msa1107040:CDS |
| TCCCAGGGTATAATGTATGC+AGG | 0.548410 | 7_3:+48194779 | Msa1107040:intron |
| AATTCTATCGTACTTACAGC+AGG | 0.548443 | 7_3:-48193135 | None:intergenic |
| GTGGCTCGAGTTGTAAGTGT+CGG | 0.550065 | 7_3:+48192913 | Msa1107040:CDS |
| GGATGTGGTATTATAGGCCA+AGG | 0.552476 | 7_3:+48194812 | Msa1107040:CDS |
| TGCAGATCTTCTTGTTGGGA+CGG | 0.558342 | 7_3:+48194274 | Msa1107040:CDS |
| GTATTTGAAGCTGAAAGGCC+AGG | 0.561879 | 7_3:+48194628 | Msa1107040:CDS |
| GTTGACTGGGCTAGGTGGAG+TGG | 0.562706 | 7_3:+48197282 | Msa1107040:CDS |
| TGGCATGCAGTTTGTTGACT+GGG | 0.565591 | 7_3:+48197269 | Msa1107040:CDS |
| GGAAAACCATCAATATCTAA+GGG | 0.570404 | 7_3:+48194344 | Msa1107040:CDS |
| ATACCAGGTCATCAATGGAC+TGG | 0.578972 | 7_3:+48197152 | Msa1107040:CDS |
| AAGCATAGAACATGATCTCA+TGG | 0.582119 | 7_3:-48193925 | None:intergenic |
| TGCACAGAAAATCTACATCC+TGG | 0.582715 | 7_3:-48194646 | None:intergenic |
| GCAGTGTATTTGAAGCTGAA+AGG | 0.583183 | 7_3:+48194623 | Msa1107040:intron |
| AGGTTAATTACTAAAATAGA+GGG | 0.589657 | 7_3:-48197509 | None:intergenic |
| GGTAATGGAAGCTTTGGAAG+TGG | 0.594931 | 7_3:+48193273 | Msa1107040:CDS |
| GAGTCGGATTCCAAGAGTGT+TGG | 0.595342 | 7_3:+48193213 | Msa1107040:CDS |
| AGAGCAGCACTCTTCAAAAG+AGG | 0.596155 | 7_3:-48196146 | None:intergenic |
| GATGACGACGACAAAGAAGA+GGG | 0.599079 | 7_3:+48193330 | Msa1107040:CDS |
| GTTCCAGTCCATTGATGACC+TGG | 0.603834 | 7_3:-48197155 | None:intergenic |
| CTCCAACATATCAAAAGGAA+GGG | 0.605068 | 7_3:-48193415 | None:intergenic |
| GTTGCTGAATATCAAAAGAG+AGG | 0.607008 | 7_3:+48194218 | Msa1107040:CDS |
| AATGGAAGCTTTGGAAGTGG+TGG | 0.621391 | 7_3:+48193276 | Msa1107040:CDS |
| TGATGACGACGACAAAGAAG+AGG | 0.621936 | 7_3:+48193329 | Msa1107040:CDS |
| AGTACGATAGAATTATCGGA+AGG | 0.623310 | 7_3:+48193144 | Msa1107040:CDS |
| GCCAATGCTAAAATATGATG+AGG | 0.623927 | 7_3:+48193362 | Msa1107040:CDS |
| AATCCAATCTGCAAAAGACA+AGG | 0.624224 | 7_3:-48192708 | None:intergenic |
| ATGACGAGTAGTAACCTGCT+AGG | 0.624592 | 7_3:-48194404 | None:intergenic |
| TTGGAGGCTGCTAAGACTGT+GGG | 0.625642 | 7_3:+48193432 | Msa1107040:CDS |
| AAGCTTTCTGCATATTACCA+AGG | 0.627406 | 7_3:-48194370 | None:intergenic |
| AAGCTTTGGAAGTGGTGGAG+CGG | 0.627761 | 7_3:+48193281 | Msa1107040:CDS |
| GTTGTGTTTGATGGTAGTGG+TGG | 0.634972 | 7_3:+48193252 | Msa1107040:CDS |
| ACAGCAGGCTGCGACTCAGT+CGG | 0.636313 | 7_3:-48193120 | None:intergenic |
| TTTGGTAGAAGCATCGCCAA+TGG | 0.639236 | 7_3:+48197179 | Msa1107040:CDS |
| GTACGATAGAATTATCGGAA+GGG | 0.641710 | 7_3:+48193145 | Msa1107040:CDS |
| CCATACAGGTGTGTTCCTTG+GGG | 0.652322 | 7_3:+48197113 | Msa1107040:intron |
| TTGTTCATCGAATTTCGGGG+TGG | 0.653042 | 7_3:+48192894 | Msa1107040:CDS |
| ATTATAGGTCCATGAACCTG+AGG | 0.655481 | 7_3:-48197413 | None:intergenic |
| CAGGAACATAAAGACATCAG+AGG | 0.657150 | 7_3:+48196106 | Msa1107040:intron |
| GGGTTGTTCATCGAATTTCG+GGG | 0.660988 | 7_3:+48192891 | Msa1107040:CDS |
| GCAGCACTCTTCAAAAGAGG+TGG | 0.662234 | 7_3:-48196143 | None:intergenic |
| TCGGGAAAGAAGCTGGTTTG+GGG | 0.662291 | 7_3:+48192932 | Msa1107040:CDS |
| GTGAAAGCGAGAGCAACTGG+TGG | 0.667024 | 7_3:-48197213 | None:intergenic |
| TTGAGAGAGACGGAGGCACG+TGG | 0.670085 | 7_3:+48193387 | Msa1107040:CDS |
| TTTGCCAACAATGTTTACGG+TGG | 0.672672 | 7_3:+48197249 | Msa1107040:CDS |
| ACGATAGAATTATCGGAAGG+GGG | 0.677053 | 7_3:+48193147 | Msa1107040:CDS |
| TGACGACGACAAAGAAGAGG+GGG | 0.684459 | 7_3:+48193332 | Msa1107040:CDS |
| AGTTTGTTGACTGGGCTAGG+TGG | 0.701181 | 7_3:+48197277 | Msa1107040:CDS |
| GCGTGTTTGAAGATACCCCA+AGG | 0.708255 | 7_3:-48197128 | None:intergenic |
| TGAGGTATTGAGAGAGACGG+AGG | 0.711529 | 7_3:+48193380 | Msa1107040:CDS |
| ATGACGACGACAAAGAAGAG+GGG | 0.712829 | 7_3:+48193331 | Msa1107040:CDS |
| TCAATTTGTGTGAACAAGTG+CGG | 0.715534 | 7_3:+48193033 | Msa1107040:CDS |
| ACATGATCATGACTGCAAAG+CGG | 0.730268 | 7_3:+48194843 | Msa1107040:CDS |
| ATTTGTGTGAACAAGTGCGG+TGG | 0.738641 | 7_3:+48193036 | Msa1107040:CDS |
| GAGTGCAATGTTGTTGAACG+AGG | 0.741246 | 7_3:+48192999 | Msa1107040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTATTAAGAATAAGAAT+TGG | + | chr7_3:48192796-48192815 | Msa1107040:five_prime_UTR | 10.0% |
| !!! | TTTTTTTTTTTTGTTTTTTC+TGG | + | chr7_3:48192824-48192843 | Msa1107040:five_prime_UTR | 10.0% |
| !!! | TTTTTTTTTTTGTTTTTTCT+GGG | + | chr7_3:48192825-48192844 | Msa1107040:five_prime_UTR | 10.0% |
| !! | TATATATATATATATATCAG+CGG | - | chr7_3:48195201-48195220 | None:intergenic | 10.0% |
| !! | AATAACTGTATAAAAATAAA+TGG | - | chr7_3:48196249-48196268 | None:intergenic | 10.0% |
| !!! | TTTATTTTTATACAGTTATT+AGG | + | chr7_3:48196249-48196268 | Msa1107040:intron | 10.0% |
| !!! | TATGTTAGTATAATTTTCAA+TGG | + | chr7_3:48194034-48194053 | Msa1107040:intron | 15.0% |
| !! | TCATGTAATAATGTTAAAAA+AGG | - | chr7_3:48196190-48196209 | None:intergenic | 15.0% |
| !!! | TTAGAATTTTTGTAGGAAAA+TGG | + | chr7_3:48192867-48192886 | Msa1107040:exon | 20.0% |
| !! | AAAAAGAAGAAGAAAGAAAT+TGG | - | chr7_3:48193674-48193693 | None:intergenic | 20.0% |
| !! | CTATACAAAAACAATAAACA+AGG | + | chr7_3:48195330-48195349 | Msa1107040:intron | 20.0% |
| !!! | TTATTTTCTCAAATTATCAC+TGG | + | chr7_3:48196820-48196839 | Msa1107040:intron | 20.0% |
| !! | AGGTTAATTACTAAAATAGA+GGG | - | chr7_3:48197512-48197531 | None:intergenic | 20.0% |
| !! | AAGGTTAATTACTAAAATAG+AGG | - | chr7_3:48197513-48197532 | None:intergenic | 20.0% |
| !! | AGAGAAGTTAGAATTTTTGT+AGG | + | chr7_3:48192860-48192879 | Msa1107040:five_prime_UTR | 25.0% |
| ! | TGTAAGTACGATAGAATTAT+CGG | + | chr7_3:48193140-48193159 | Msa1107040:CDS | 25.0% |
| ! | TCTTAGATATTTGGATTTAG+AGG | + | chr7_3:48193473-48193492 | Msa1107040:CDS | 25.0% |
| ! | TTTATGATATTCTCAATTGC+AGG | + | chr7_3:48193878-48193897 | Msa1107040:intron | 25.0% |
| ! | TTATGATATTCTCAATTGCA+GGG | + | chr7_3:48193879-48193898 | Msa1107040:intron | 25.0% |
| ! | AAATATTGACACCAAAAACA+AGG | - | chr7_3:48194443-48194462 | None:intergenic | 25.0% |
| ! | CTAAAGACAAAAAAGCAATT+AGG | - | chr7_3:48194559-48194578 | None:intergenic | 25.0% |
| ! | TGAGTGCAAGATTATTTATT+TGG | + | chr7_3:48194701-48194720 | Msa1107040:intron | 25.0% |
| !!! | ATATTTACTGAGAGTATTCA+AGG | + | chr7_3:48195246-48195265 | Msa1107040:intron | 25.0% |
| ! | AATTGACACTTATATCAATC+AGG | - | chr7_3:48195287-48195306 | None:intergenic | 25.0% |
| !! | TAGAGCTTTATATGAAAAGT+GGG | - | chr7_3:48195313-48195332 | None:intergenic | 25.0% |
| !! | ATAGAGCTTTATATGAAAAG+TGG | - | chr7_3:48195314-48195333 | None:intergenic | 25.0% |
| !!! | AAACATGTCAGTTTTTTGTT+TGG | + | chr7_3:48195709-48195728 | Msa1107040:intron | 25.0% |
| !! | TTTACCTATGAATTAAGTTG+AGG | + | chr7_3:48196275-48196294 | Msa1107040:intron | 25.0% |
| ! | TTTACCTCAACTTAATTCAT+AGG | - | chr7_3:48196282-48196301 | None:intergenic | 25.0% |
| ! | AAGTCATAAATCAACTGTAA+GGG | - | chr7_3:48196625-48196644 | None:intergenic | 25.0% |
| ! | AAAGTCATAAATCAACTGTA+AGG | - | chr7_3:48196626-48196645 | None:intergenic | 25.0% |
| !! | TCTATTCTAAAGATACAACT+TGG | + | chr7_3:48196654-48196673 | Msa1107040:intron | 25.0% |
| !! | ATAAATGTAATTGAAAGTGC+TGG | - | chr7_3:48196794-48196813 | None:intergenic | 25.0% |
| ! | GAATAAAATACATGTCAAGT+TGG | - | chr7_3:48197067-48197086 | None:intergenic | 25.0% |
| ! | TTCAACCTCAAGAAAATTTA+TGG | - | chr7_3:48197380-48197399 | None:intergenic | 25.0% |
| ! | CTATAATGACCAAAGATTAA+GGG | + | chr7_3:48197429-48197448 | Msa1107040:three_prime_UTR | 25.0% |
| !!! | GTTTTAGGCAATAAATTTAG+AGG | + | chr7_3:48197473-48197492 | Msa1107040:three_prime_UTR | 25.0% |
| ! | GAATTTTTGTAGGAAAATGG+CGG | + | chr7_3:48192870-48192889 | Msa1107040:exon | 30.0% |
| ! | AATTTTTGTAGGAAAATGGC+GGG | + | chr7_3:48192871-48192890 | Msa1107040:exon | 30.0% |
| !! | GTTTTAGTAGTTTGAGTTTC+AGG | + | chr7_3:48192977-48192996 | Msa1107040:CDS | 30.0% |
| ! | GAAAATTTTGGATAGTGAGT+CGG | + | chr7_3:48193197-48193216 | Msa1107040:CDS | 30.0% |
| ! | AGTGTTGGAAATGATGATAA+TGG | + | chr7_3:48193228-48193247 | Msa1107040:CDS | 30.0% |
| !!! | ACCTCATCATATTTTAGCAT+TGG | - | chr7_3:48193366-48193385 | None:intergenic | 30.0% |
| TATCTAAGAAGAAGCAACTT+CGG | - | chr7_3:48193462-48193481 | None:intergenic | 30.0% | |
| GTTGCTTCTTCTTAGATATT+TGG | + | chr7_3:48193464-48193483 | Msa1107040:CDS | 30.0% | |
| TGTGACCAAATTCATATTCA+TGG | + | chr7_3:48193744-48193763 | Msa1107040:intron | 30.0% | |
| TTGGACCATGAATATGAATT+TGG | - | chr7_3:48193752-48193771 | None:intergenic | 30.0% | |
| CTCAAAACTGGAAAATTCTT+GGG | - | chr7_3:48193780-48193799 | None:intergenic | 30.0% | |
| TCTCAAAACTGGAAAATTCT+TGG | - | chr7_3:48193781-48193800 | None:intergenic | 30.0% | |
| !!! | AGAATTTTCCAGTTTTGAGA+TGG | + | chr7_3:48193781-48193800 | Msa1107040:intron | 30.0% |
| ! | GCATTTTCTAATAGCATACA+TGG | - | chr7_3:48193807-48193826 | None:intergenic | 30.0% |
| AAACAAGATGATCATTACCT+AGG | + | chr7_3:48193840-48193859 | Msa1107040:intron | 30.0% | |
| !! | CCAATTTTGAAAAGAAATGC+TGG | - | chr7_3:48193972-48193991 | None:intergenic | 30.0% |
| ! | CCAGCATTTCTTTTCAAAAT+TGG | + | chr7_3:48193969-48193988 | Msa1107040:CDS | 30.0% |
| TTACAGAACAGTCAAAGAAT+TGG | - | chr7_3:48194084-48194103 | None:intergenic | 30.0% | |
| CTGCATATCATGAGTTAAAT+CGG | - | chr7_3:48194171-48194190 | None:intergenic | 30.0% | |
| AGGAAAACCATCAATATCTA+AGG | + | chr7_3:48194343-48194362 | Msa1107040:CDS | 30.0% | |
| GGAAAACCATCAATATCTAA+GGG | + | chr7_3:48194344-48194363 | Msa1107040:CDS | 30.0% | |
| TACTCGTCATGACATTAAAA+GGG | + | chr7_3:48194417-48194436 | Msa1107040:intron | 30.0% | |
| TTGGTCAATTCAATTATGAG+AGG | + | chr7_3:48194720-48194739 | Msa1107040:intron | 30.0% | |
| CAATGAGTGTTTCATTTGAA+TGG | + | chr7_3:48194746-48194765 | Msa1107040:intron | 30.0% | |
| TGCAAACTATGTAATGACAA+CGG | - | chr7_3:48194885-48194904 | None:intergenic | 30.0% | |
| GAAAAAAAATCAGCATCAGA+GGG | - | chr7_3:48194955-48194974 | None:intergenic | 30.0% | |
| GTCAGATATATGATTGGAAA+GGG | - | chr7_3:48194977-48194996 | None:intergenic | 30.0% | |
| TGTCAGATATATGATTGGAA+AGG | - | chr7_3:48194978-48194997 | None:intergenic | 30.0% | |
| CTGATTGTCAGATATATGAT+TGG | - | chr7_3:48194983-48195002 | None:intergenic | 30.0% | |
| CAATCATATATCTGACAATC+AGG | + | chr7_3:48194981-48195000 | Msa1107040:intron | 30.0% | |
| TCTAATACTCACTCTCTTAT+TGG | + | chr7_3:48195020-48195039 | Msa1107040:intron | 30.0% | |
| ATTATATTAGAAGATCCGCA+TGG | - | chr7_3:48195171-48195190 | None:intergenic | 30.0% | |
| TACTATTTGAGCTTATCTAC+CGG | + | chr7_3:48195366-48195385 | Msa1107040:intron | 30.0% | |
| TACGAAAATATGCTGAAAAC+AGG | - | chr7_3:48195458-48195477 | None:intergenic | 30.0% | |
| CATATAATGAAGTCACACTA+TGG | - | chr7_3:48195612-48195631 | None:intergenic | 30.0% | |
| ! | GCTTTTTGCTTGACATAAAT+AGG | + | chr7_3:48195639-48195658 | Msa1107040:intron | 30.0% |
| !!! | CAGTTTTTTGTTTGGAAACT+CGG | + | chr7_3:48195717-48195736 | Msa1107040:intron | 30.0% |
| AGTATCATTCAGTATGAACA+TGG | - | chr7_3:48196019-48196038 | None:intergenic | 30.0% | |
| TTATGACTATCGACAAACAA+GGG | - | chr7_3:48196313-48196332 | None:intergenic | 30.0% | |
| ATTATGACTATCGACAAACA+AGG | - | chr7_3:48196314-48196333 | None:intergenic | 30.0% | |
| CAATAAAATCAGTTCTGTTC+TGG | - | chr7_3:48196479-48196498 | None:intergenic | 30.0% | |
| CTAACAAGTTATGTGCAATA+TGG | + | chr7_3:48196960-48196979 | Msa1107040:intron | 30.0% | |
| ! | TCTAGCCATAAATTTTCTTG+AGG | + | chr7_3:48197372-48197391 | Msa1107040:three_prime_UTR | 30.0% |
| CCTTAATCTTTGGTCATTAT+AGG | - | chr7_3:48197431-48197450 | None:intergenic | 30.0% | |
| CCTATAATGACCAAAGATTA+AGG | + | chr7_3:48197428-48197447 | Msa1107040:three_prime_UTR | 30.0% | |
| !!! | GATTGGTTTAGAAAGGTTTT+AGG | + | chr7_3:48197458-48197477 | Msa1107040:three_prime_UTR | 30.0% |
| AACAGTAGACTTCATCATTA+AGG | - | chr7_3:48197532-48197551 | None:intergenic | 30.0% | |
| ! | ATTCCTTGTCTTTTGCAGAT+TGG | + | chr7_3:48192705-48192724 | Msa1107040:five_prime_UTR | 35.0% |
| AATCCAATCTGCAAAAGACA+AGG | - | chr7_3:48192711-48192730 | None:intergenic | 35.0% | |
| ! | TCTTTTGCAGATTGGATTTG+AGG | + | chr7_3:48192713-48192732 | Msa1107040:five_prime_UTR | 35.0% |
| !! | ATTTGAGGTGTGATCTGTTT+TGG | + | chr7_3:48192728-48192747 | Msa1107040:five_prime_UTR | 35.0% |
| GTTTATCTGTATTGTTGAGC+TGG | + | chr7_3:48192750-48192769 | Msa1107040:five_prime_UTR | 35.0% | |
| !!! | GTTTTTTCTGGGTAGTTTTG+TGG | + | chr7_3:48192836-48192855 | Msa1107040:five_prime_UTR | 35.0% |
| CACTTGTTCACACAAATTGA+TGG | - | chr7_3:48193033-48193052 | None:intergenic | 35.0% | |
| TCAATTTGTGTGAACAAGTG+CGG | + | chr7_3:48193033-48193052 | Msa1107040:CDS | 35.0% | |
| AATTCTATCGTACTTACAGC+AGG | - | chr7_3:48193138-48193157 | None:intergenic | 35.0% | |
| AGTACGATAGAATTATCGGA+AGG | + | chr7_3:48193144-48193163 | Msa1107040:CDS | 35.0% | |
| GTACGATAGAATTATCGGAA+GGG | + | chr7_3:48193145-48193164 | Msa1107040:CDS | 35.0% | |
| TACGATAGAATTATCGGAAG+GGG | + | chr7_3:48193146-48193165 | Msa1107040:CDS | 35.0% | |
| ! | GGGAAAGGAACAGAAAATTT+TGG | + | chr7_3:48193185-48193204 | Msa1107040:CDS | 35.0% |
| ATCATCATTTCCAACACTCT+TGG | - | chr7_3:48193226-48193245 | None:intergenic | 35.0% | |
| !! | GATAATGGTGTTGTGTTTGA+TGG | + | chr7_3:48193243-48193262 | Msa1107040:CDS | 35.0% |
| GCCAATGCTAAAATATGATG+AGG | + | chr7_3:48193362-48193381 | Msa1107040:CDS | 35.0% | |
| ! | TACCCTTCCTTTTGATATGT+TGG | + | chr7_3:48193413-48193432 | Msa1107040:CDS | 35.0% |
| CTCCAACATATCAAAAGGAA+GGG | - | chr7_3:48193418-48193437 | None:intergenic | 35.0% | |
| ATCTAAGAAGAAGCAACTTC+GGG | - | chr7_3:48193461-48193480 | None:intergenic | 35.0% | |
| !!! | GGATTTAGAGGTTAGTTTTG+AGG | + | chr7_3:48193485-48193504 | Msa1107040:intron | 35.0% |
| GAAAGAAATTGGCAATGCTT+TGG | - | chr7_3:48193663-48193682 | None:intergenic | 35.0% | |
| ! | TTTTCTCTCTCTCATTGTTG+TGG | + | chr7_3:48193701-48193720 | Msa1107040:intron | 35.0% |
| TTTCTCTCTCTCATTGTTGT+GGG | + | chr7_3:48193702-48193721 | Msa1107040:intron | 35.0% | |
| AAAACTGGAAAATTCTTGGG+TGG | - | chr7_3:48193777-48193796 | None:intergenic | 35.0% | |
| AACAACAACGTTAAACTCCT+AGG | - | chr7_3:48193860-48193879 | None:intergenic | 35.0% | |
| AAGCATAGAACATGATCTCA+TGG | - | chr7_3:48193928-48193947 | None:intergenic | 35.0% | |
| !! | TCTTTTCAAAATTGGCTCAG+AGG | + | chr7_3:48193977-48193996 | Msa1107040:CDS | 35.0% |
| CGGATTACTTAAGATAGAGA+AGG | - | chr7_3:48194151-48194170 | None:intergenic | 35.0% | |
| ! | CTTTTGATATTCAGCAACAG+TGG | - | chr7_3:48194216-48194235 | None:intergenic | 35.0% |
| GTTGCTGAATATCAAAAGAG+AGG | + | chr7_3:48194218-48194237 | Msa1107040:CDS | 35.0% | |
| ! | AAAAGAGAGGCAAAGACTTT+TGG | + | chr7_3:48194231-48194250 | Msa1107040:CDS | 35.0% |
| TATGTTGCAGATCTTCTTGT+TGG | + | chr7_3:48194269-48194288 | Msa1107040:CDS | 35.0% | |
| ATGTTGCAGATCTTCTTGTT+GGG | + | chr7_3:48194270-48194289 | Msa1107040:CDS | 35.0% | |
| !! | GTTGTTAATGTTGCTTTGGT+TGG | + | chr7_3:48194296-48194315 | Msa1107040:CDS | 35.0% |
| AGGAATCCCTTAGATATTGA+TGG | - | chr7_3:48194353-48194372 | None:intergenic | 35.0% | |
| TCAATATCTAAGGGATTCCT+TGG | + | chr7_3:48194353-48194372 | Msa1107040:CDS | 35.0% | |
| AAGCTTTCTGCATATTACCA+AGG | - | chr7_3:48194373-48194392 | None:intergenic | 35.0% | |
| CTACTCGTCATGACATTAAA+AGG | + | chr7_3:48194416-48194435 | Msa1107040:intron | 35.0% | |
| !!! | CATTAAAAGGGCCTTGTTTT+TGG | + | chr7_3:48194429-48194448 | Msa1107040:intron | 35.0% |
| !!! | GACTTTCATGTCATTTTGGA+TGG | - | chr7_3:48194523-48194542 | None:intergenic | 35.0% |
| TCCAAAATGACATGAAAGTC+AGG | + | chr7_3:48194523-48194542 | Msa1107040:intron | 35.0% | |
| !! | ACCTGACTTTCATGTCATTT+TGG | - | chr7_3:48194527-48194546 | None:intergenic | 35.0% |
| ACTTGGAACATACTTCTTCA+AGG | + | chr7_3:48194675-48194694 | Msa1107040:CDS | 35.0% | |
| AATGGACATTTCTATTCCCA+GGG | + | chr7_3:48194764-48194783 | Msa1107040:intron | 35.0% | |
| GGATTTGGATGTGGTATTAT+AGG | + | chr7_3:48194806-48194825 | Msa1107040:CDS | 35.0% | |
| GGAAAAAAAATCAGCATCAG+AGG | - | chr7_3:48194956-48194975 | None:intergenic | 35.0% | |
| TCAATGTGTGTTGAACAGTT+TGG | + | chr7_3:48195048-48195067 | Msa1107040:intron | 35.0% | |
| CAATAGGATTAAACCCATGT+GGG | - | chr7_3:48195101-48195120 | None:intergenic | 35.0% | |
| ! | CATATTTTCGTAAGCTCTCT+TGG | + | chr7_3:48195466-48195485 | Msa1107040:intron | 35.0% |
| GCTTGACATAAATAGGTTCT+AGG | + | chr7_3:48195646-48195665 | Msa1107040:intron | 35.0% | |
| ! | TCTAGGAGCAGATTTTAAAC+TGG | + | chr7_3:48195663-48195682 | Msa1107040:intron | 35.0% |
| ! | ACTTTGCTATGGCTTCAATT+GGG | - | chr7_3:48195819-48195838 | None:intergenic | 35.0% |
| ACTGTGTAGTTCAATTAGAG+TGG | + | chr7_3:48196570-48196589 | Msa1107040:intron | 35.0% | |
| AGTGATTAGAGACGGAAAAA+AGG | - | chr7_3:48196715-48196734 | None:intergenic | 35.0% | |
| AGATCAAGCATGACAAATCT+TGG | - | chr7_3:48196990-48197009 | None:intergenic | 35.0% | |
| ! | CGTTTTGCCAACAATGTTTA+CGG | + | chr7_3:48197246-48197265 | Msa1107040:CDS | 35.0% |
| GAAGCATAAATTTCTACCTC+AGG | + | chr7_3:48197397-48197416 | Msa1107040:three_prime_UTR | 35.0% | |
| AAATTTCTACCTCAGGTTCA+TGG | + | chr7_3:48197404-48197423 | Msa1107040:three_prime_UTR | 35.0% | |
| ACGATAGAATTATCGGAAGG+GGG | + | chr7_3:48193147-48193166 | Msa1107040:CDS | 40.0% | |
| !! | TTTGATGGTAGTGGTGGTAA+TGG | + | chr7_3:48193258-48193277 | Msa1107040:CDS | 40.0% |
| ACAAAGAAGAGGGGGAATTT+GGG | + | chr7_3:48193340-48193359 | Msa1107040:CDS | 40.0% | |
| !! | TGATGAGGTATTGAGAGAGA+CGG | + | chr7_3:48193377-48193396 | Msa1107040:CDS | 40.0% |
| CCTCCAACATATCAAAAGGA+AGG | - | chr7_3:48193419-48193438 | None:intergenic | 40.0% | |
| ! | CCTTCCTTTTGATATGTTGG+AGG | + | chr7_3:48193416-48193435 | Msa1107040:CDS | 40.0% |
| !!! | AGAGGTTAGTTTTGAGGAGA+AGG | + | chr7_3:48193491-48193510 | Msa1107040:intron | 40.0% |
| !!! | AGTTTTGAGGAGAAGGTCTT+AGG | + | chr7_3:48193498-48193517 | Msa1107040:intron | 40.0% |
| TTCTCTCTCTCATTGTTGTG+GGG | + | chr7_3:48193703-48193722 | Msa1107040:intron | 40.0% | |
| ATACATGGCCATCTCAAAAC+TGG | - | chr7_3:48193792-48193811 | None:intergenic | 40.0% | |
| ! | CTCAATTGCAGGGATCTTTT+TGG | + | chr7_3:48193889-48193908 | Msa1107040:intron | 40.0% |
| GATCTCATGGCAAATCCTAA+AGG | - | chr7_3:48193915-48193934 | None:intergenic | 40.0% | |
| ! | GACGGTTGTTAATGTTGCTT+TGG | + | chr7_3:48194292-48194311 | Msa1107040:CDS | 40.0% |
| !! | TGTTGCTTTGGTTGGAATGT+TGG | + | chr7_3:48194304-48194323 | Msa1107040:CDS | 40.0% |
| ! | GGTTTTCCTATTCGAGCATA+AGG | - | chr7_3:48194332-48194351 | None:intergenic | 40.0% |
| ! | GCAGTGTATTTGAAGCTGAA+AGG | + | chr7_3:48194623-48194642 | Msa1107040:intron | 40.0% |
| TGCACAGAAAATCTACATCC+TGG | - | chr7_3:48194649-48194668 | None:intergenic | 40.0% | |
| GAATGGACATTTCTATTCCC+AGG | + | chr7_3:48194763-48194782 | Msa1107040:intron | 40.0% | |
| ACCTGCATACATTATACCCT+GGG | - | chr7_3:48194783-48194802 | None:intergenic | 40.0% | |
| GGTATAATGTATGCAGGTGT+TGG | + | chr7_3:48194785-48194804 | Msa1107040:CDS | 40.0% | |
| !! | ATGTATGCAGGTGTTGGATT+TGG | + | chr7_3:48194791-48194810 | Msa1107040:CDS | 40.0% |
| TGATCATGTTTGCAATGCCT+TGG | - | chr7_3:48194832-48194851 | None:intergenic | 40.0% | |
| ACATGATCATGACTGCAAAG+CGG | + | chr7_3:48194843-48194862 | Msa1107040:CDS | 40.0% | |
| ! | CAATGCAGAGTGTCTGAATA+TGG | - | chr7_3:48194930-48194949 | None:intergenic | 40.0% |
| GAAATGAGTCCCACATAAAG+TGG | + | chr7_3:48195070-48195089 | Msa1107040:intron | 40.0% | |
| CCAATAGGATTAAACCCATG+TGG | - | chr7_3:48195102-48195121 | None:intergenic | 40.0% | |
| CCACATGGGTTTAATCCTAT+TGG | + | chr7_3:48195099-48195118 | Msa1107040:intron | 40.0% | |
| GTTTAATCCTATTGGAGAGC+AGG | + | chr7_3:48195107-48195126 | Msa1107040:intron | 40.0% | |
| TTTAACACCTGCTCTCCAAT+AGG | - | chr7_3:48195117-48195136 | None:intergenic | 40.0% | |
| ! | TTTTCGTAAGCTCTCTTGGA+TGG | + | chr7_3:48195470-48195489 | Msa1107040:intron | 40.0% |
| ! | AGTCACACTATGGCTCTATT+TGG | - | chr7_3:48195602-48195621 | None:intergenic | 40.0% |
| TTGTTTGGAAACTCGGTATC+TGG | + | chr7_3:48195724-48195743 | Msa1107040:intron | 40.0% | |
| ! | GACTTTGCTATGGCTTCAAT+TGG | - | chr7_3:48195820-48195839 | None:intergenic | 40.0% |
| GTGGCAACAATTCTTGTGTT+GGG | - | chr7_3:48195856-48195875 | None:intergenic | 40.0% | |
| ! | GAAATTTTTAACAACCCCCC+GGG | - | chr7_3:48195962-48195981 | None:intergenic | 40.0% |
| ! | CGAAATTTTTAACAACCCCC+CGG | - | chr7_3:48195963-48195982 | None:intergenic | 40.0% |
| CTCTGATGTCTTTATGTTCC+TGG | - | chr7_3:48196108-48196127 | None:intergenic | 40.0% | |
| CAGGAACATAAAGACATCAG+AGG | + | chr7_3:48196106-48196125 | Msa1107040:intron | 40.0% | |
| !!! | TTTTGAAGAGTGCTGCTCTT+TGG | + | chr7_3:48196150-48196169 | Msa1107040:CDS | 40.0% |
| !! | TTTGAAGAGTGCTGCTCTTT+GGG | + | chr7_3:48196151-48196170 | Msa1107040:CDS | 40.0% |
| GTGTAGTTCAATTAGAGTGG+TGG | + | chr7_3:48196573-48196592 | Msa1107040:intron | 40.0% | |
| AGTTCAATTAGAGTGGTGGT+TGG | + | chr7_3:48196577-48196596 | Msa1107040:intron | 40.0% | |
| CAACTTGGTATGTTGTTCTC+TGG | + | chr7_3:48196669-48196688 | Msa1107040:intron | 40.0% | |
| TAGAGACGGAAAAAAGGAAG+AGG | - | chr7_3:48196709-48196728 | None:intergenic | 40.0% | |
| ! | CTGAAGTGCTAGTACTACAT+AGG | - | chr7_3:48196745-48196764 | None:intergenic | 40.0% |
| CTTCAGATTGAATGTGTGTC+CGG | + | chr7_3:48196759-48196778 | Msa1107040:intron | 40.0% | |
| !! | GTAATTGAAAGTGCTGGTGT+TGG | - | chr7_3:48196788-48196807 | None:intergenic | 40.0% |
| AACACACCTGTATGGATGTT+CGG | - | chr7_3:48197108-48197127 | None:intergenic | 40.0% | |
| TTTGCCAACAATGTTTACGG+TGG | + | chr7_3:48197249-48197268 | Msa1107040:CDS | 40.0% | |
| ATTATAGGTCCATGAACCTG+AGG | - | chr7_3:48197416-48197435 | None:intergenic | 40.0% | |
| ATCCATGCACCCTTAATCTT+TGG | - | chr7_3:48197441-48197460 | None:intergenic | 40.0% | |
| ! | AAGATTAAGGGTGCATGGAT+TGG | + | chr7_3:48197441-48197460 | Msa1107040:three_prime_UTR | 40.0% |
| !! | GTGCATGGATTGGTTTAGAA+AGG | + | chr7_3:48197451-48197470 | Msa1107040:three_prime_UTR | 40.0% |
| ! | GCGGGTTGTTCATCGAATTT+CGG | + | chr7_3:48192889-48192908 | Msa1107040:CDS | 45.0% |
| CGGGTTGTTCATCGAATTTC+GGG | + | chr7_3:48192890-48192909 | Msa1107040:CDS | 45.0% | |
| GGGTTGTTCATCGAATTTCG+GGG | + | chr7_3:48192891-48192910 | Msa1107040:CDS | 45.0% | |
| TTGTTCATCGAATTTCGGGG+TGG | + | chr7_3:48192894-48192913 | Msa1107040:CDS | 45.0% | |
| GAGTGCAATGTTGTTGAACG+AGG | + | chr7_3:48192999-48193018 | Msa1107040:CDS | 45.0% | |
| ATTTGTGTGAACAAGTGCGG+TGG | + | chr7_3:48193036-48193055 | Msa1107040:CDS | 45.0% | |
| ATAGAATTATCGGAAGGGGG+AGG | + | chr7_3:48193150-48193169 | Msa1107040:CDS | 45.0% | |
| ! | AGGTGATAGTGTTGTGGGAA+AGG | + | chr7_3:48193170-48193189 | Msa1107040:CDS | 45.0% |
| ! | GGTGTTGTGTTTGATGGTAG+TGG | + | chr7_3:48193249-48193268 | Msa1107040:CDS | 45.0% |
| !! | GTTGTGTTTGATGGTAGTGG+TGG | + | chr7_3:48193252-48193271 | Msa1107040:CDS | 45.0% |
| !! | AGTGGTGGTAATGGAAGCTT+TGG | + | chr7_3:48193267-48193286 | Msa1107040:CDS | 45.0% |
| !! | GGTAATGGAAGCTTTGGAAG+TGG | + | chr7_3:48193273-48193292 | Msa1107040:CDS | 45.0% |
| !! | AATGGAAGCTTTGGAAGTGG+TGG | + | chr7_3:48193276-48193295 | Msa1107040:CDS | 45.0% |
| ! | TGATGACGACGACAAAGAAG+AGG | + | chr7_3:48193329-48193348 | Msa1107040:CDS | 45.0% |
| GATGACGACGACAAAGAAGA+GGG | + | chr7_3:48193330-48193349 | Msa1107040:CDS | 45.0% | |
| ATGACGACGACAAAGAAGAG+GGG | + | chr7_3:48193331-48193350 | Msa1107040:CDS | 45.0% | |
| GACAAAGAAGAGGGGGAATT+TGG | + | chr7_3:48193339-48193358 | Msa1107040:CDS | 45.0% | |
| GCAGCCTCCAACATATCAAA+AGG | - | chr7_3:48193423-48193442 | None:intergenic | 45.0% | |
| TTTGAGGAGAAGGTCTTAGG+TGG | + | chr7_3:48193501-48193520 | Msa1107040:intron | 45.0% | |
| !! | GTGGGGTGTCATTCATTGAT+TGG | + | chr7_3:48193720-48193739 | Msa1107040:intron | 45.0% |
| GGAAAATTCTTGGGTGGTCT+TGG | - | chr7_3:48193771-48193790 | None:intergenic | 45.0% | |
| !! | CAGGGATCTTTTTGGCCTTT+AGG | + | chr7_3:48193897-48193916 | Msa1107040:intron | 45.0% |
| TATGCTTCGCAATCGAATGC+TGG | + | chr7_3:48193941-48193960 | Msa1107040:CDS | 45.0% | |
| TGCAGATCTTCTTGTTGGGA+CGG | + | chr7_3:48194274-48194293 | Msa1107040:CDS | 45.0% | |
| TTGGCACCTTATGCTCGAAT+AGG | + | chr7_3:48194323-48194342 | Msa1107040:CDS | 45.0% | |
| CTTATGCAGCTTTACCTAGC+AGG | + | chr7_3:48194390-48194409 | Msa1107040:CDS | 45.0% | |
| ATGACGAGTAGTAACCTGCT+AGG | - | chr7_3:48194407-48194426 | None:intergenic | 45.0% | |
| ! | GTATTTGAAGCTGAAAGGCC+AGG | + | chr7_3:48194628-48194647 | Msa1107040:CDS | 45.0% |
| ! | TTTTCTGTGCAGCAGAGACT+TGG | + | chr7_3:48194658-48194677 | Msa1107040:CDS | 45.0% |
| TCCCAGGGTATAATGTATGC+AGG | + | chr7_3:48194779-48194798 | Msa1107040:intron | 45.0% | |
| CACCTGCATACATTATACCC+TGG | - | chr7_3:48194784-48194803 | None:intergenic | 45.0% | |
| GGATGTGGTATTATAGGCCA+AGG | + | chr7_3:48194812-48194831 | Msa1107040:CDS | 45.0% | |
| ATCATGACTGCAAAGCGGTA+TGG | + | chr7_3:48194848-48194867 | Msa1107040:intron | 45.0% | |
| !! | ATCTGACAATCAGGAGTGCT+AGG | + | chr7_3:48194990-48195009 | Msa1107040:intron | 45.0% |
| TGGGTCTCACCACTTTATGT+GGG | - | chr7_3:48195082-48195101 | None:intergenic | 45.0% | |
| ATAAAGTGGTGAGACCCACA+TGG | + | chr7_3:48195084-48195103 | Msa1107040:intron | 45.0% | |
| TAAAGTGGTGAGACCCACAT+GGG | + | chr7_3:48195085-48195104 | Msa1107040:intron | 45.0% | |
| ATGGCCAATTGTCAGATGAG+GGG | - | chr7_3:48195152-48195171 | None:intergenic | 45.0% | |
| CATGGCCAATTGTCAGATGA+GGG | - | chr7_3:48195153-48195172 | None:intergenic | 45.0% | |
| TCATCTGACAATTGGCCATG+CGG | + | chr7_3:48195153-48195172 | Msa1107040:intron | 45.0% | |
| TTGAGCTTATCTACCGGCAT+AGG | + | chr7_3:48195372-48195391 | Msa1107040:intron | 45.0% | |
| TAGGCACTTGTGAGACTCTT+TGG | + | chr7_3:48195391-48195410 | Msa1107040:intron | 45.0% | |
| AGGCACTTGTGAGACTCTTT+GGG | + | chr7_3:48195392-48195411 | Msa1107040:intron | 45.0% | |
| !! | AGACTCTTTGGGAGAGCTTT+TGG | + | chr7_3:48195403-48195422 | Msa1107040:intron | 45.0% |
| AGCAATCCTACTGTCCAGTA+GGG | + | chr7_3:48195771-48195790 | Msa1107040:intron | 45.0% | |
| AGCCATAGCAAAGTCCTGTA+TGG | + | chr7_3:48195825-48195844 | Msa1107040:intron | 45.0% | |
| GTCCATACAGGACTTTGCTA+TGG | - | chr7_3:48195830-48195849 | None:intergenic | 45.0% | |
| GGTGGCAACAATTCTTGTGT+TGG | - | chr7_3:48195857-48195876 | None:intergenic | 45.0% | |
| ACACAAGAATTGTTGCCACC+TGG | + | chr7_3:48195857-48195876 | Msa1107040:intron | 45.0% | |
| CACAAGAATTGTTGCCACCT+GGG | + | chr7_3:48195858-48195877 | Msa1107040:intron | 45.0% | |
| ACAAGAATTGTTGCCACCTG+GGG | + | chr7_3:48195859-48195878 | Msa1107040:intron | 45.0% | |
| TGTTCCTGGTAGCAAAGAAG+AGG | - | chr7_3:48196094-48196113 | None:intergenic | 45.0% | |
| CTCTTCAAAAGAGGTGGTAC+AGG | - | chr7_3:48196140-48196159 | None:intergenic | 45.0% | |
| AGAGCAGCACTCTTCAAAAG+AGG | - | chr7_3:48196149-48196168 | None:intergenic | 45.0% | |
| !! | TTGAAGAGTGCTGCTCTTTG+GGG | + | chr7_3:48196152-48196171 | Msa1107040:CDS | 45.0% |
| GCTAGTACTACATAGGTCGT+CGG | - | chr7_3:48196738-48196757 | None:intergenic | 45.0% | |
| !! | ACGAAGCACTGAGACATACA+CGG | - | chr7_3:48196875-48196894 | None:intergenic | 45.0% |
| GTGCTTCGTAGCACAAAACA+AGG | + | chr7_3:48196886-48196905 | Msa1107040:intron | 45.0% | |
| ACACACCTGTATGGATGTTC+GGG | - | chr7_3:48197107-48197126 | None:intergenic | 45.0% | |
| ATCCATACAGGTGTGTTCCT+TGG | + | chr7_3:48197111-48197130 | Msa1107040:intron | 45.0% | |
| TCCATACAGGTGTGTTCCTT+GGG | + | chr7_3:48197112-48197131 | Msa1107040:intron | 45.0% | |
| ATCTTCAAACACGCGATACC+AGG | + | chr7_3:48197137-48197156 | Msa1107040:CDS | 45.0% | |
| ATACCAGGTCATCAATGGAC+TGG | + | chr7_3:48197152-48197171 | Msa1107040:CDS | 45.0% | |
| !! | CATCAATGGACTGGAACGTT+TGG | + | chr7_3:48197161-48197180 | Msa1107040:CDS | 45.0% |
| !! | TTTGGTAGAAGCATCGCCAA+TGG | + | chr7_3:48197179-48197198 | Msa1107040:CDS | 45.0% |
| CATGCCACCGTAAACATTGT+TGG | - | chr7_3:48197256-48197275 | None:intergenic | 45.0% | |
| !! | TGGCATGCAGTTTGTTGACT+GGG | + | chr7_3:48197269-48197288 | Msa1107040:CDS | 45.0% |
| ! | GACCAAAGATTAAGGGTGCA+TGG | + | chr7_3:48197436-48197455 | Msa1107040:three_prime_UTR | 45.0% |
| ! | GTGGCTCGAGTTGTAAGTGT+CGG | + | chr7_3:48192913-48192932 | Msa1107040:CDS | 50.0% |
| ! | TGGCTCGAGTTGTAAGTGTC+GGG | + | chr7_3:48192914-48192933 | Msa1107040:CDS | 50.0% |
| !! | GTAAGTGTCGGGAAAGAAGC+TGG | + | chr7_3:48192925-48192944 | Msa1107040:CDS | 50.0% |
| TGTCGGGAAAGAAGCTGGTT+TGG | + | chr7_3:48192930-48192949 | Msa1107040:CDS | 50.0% | |
| ! | GTCGGGAAAGAAGCTGGTTT+GGG | + | chr7_3:48192931-48192950 | Msa1107040:CDS | 50.0% |
| !! | TCGGGAAAGAAGCTGGTTTG+GGG | + | chr7_3:48192932-48192951 | Msa1107040:CDS | 50.0% |
| ! | GAGTCGGATTCCAAGAGTGT+TGG | + | chr7_3:48193213-48193232 | Msa1107040:CDS | 50.0% |
| !! | AAGCTTTGGAAGTGGTGGAG+CGG | + | chr7_3:48193281-48193300 | Msa1107040:CDS | 50.0% |
| TGACGACGACAAAGAAGAGG+GGG | + | chr7_3:48193332-48193351 | Msa1107040:CDS | 50.0% | |
| !! | TGAGGTATTGAGAGAGACGG+AGG | + | chr7_3:48193380-48193399 | Msa1107040:CDS | 50.0% |
| TTGGAGGCTGCTAAGACTGT+GGG | + | chr7_3:48193432-48193451 | Msa1107040:CDS | 50.0% | |
| !! | GCAGGTGTTGGATTTGGATG+TGG | + | chr7_3:48194797-48194816 | Msa1107040:CDS | 50.0% |
| GTGGGTCTCACCACTTTATG+TGG | - | chr7_3:48195083-48195102 | None:intergenic | 50.0% | |
| !! | ATTGTCAGATGAGGGGTGCT+AGG | - | chr7_3:48195145-48195164 | None:intergenic | 50.0% |
| AGCACCCCTCATCTGACAAT+TGG | + | chr7_3:48195145-48195164 | Msa1107040:intron | 50.0% | |
| GCATGGCCAATTGTCAGATG+AGG | - | chr7_3:48195154-48195173 | None:intergenic | 50.0% | |
| AGTCTCACAAGTGCCTATGC+CGG | - | chr7_3:48195388-48195407 | None:intergenic | 50.0% | |
| AAACTCGGTATCTGGCCCAA+TGG | + | chr7_3:48195732-48195751 | Msa1107040:intron | 50.0% | |
| AACTCGGTATCTGGCCCAAT+GGG | + | chr7_3:48195733-48195752 | Msa1107040:intron | 50.0% | |
| CCCAAGATTAGACGCCCATT+GGG | - | chr7_3:48195750-48195769 | None:intergenic | 50.0% | |
| CCCAATGGGCGTCTAATCTT+GGG | + | chr7_3:48195747-48195766 | Msa1107040:intron | 50.0% | |
| CCAATGGGCGTCTAATCTTG+GGG | + | chr7_3:48195748-48195767 | Msa1107040:intron | 50.0% | |
| GAGCAATCCTACTGTCCAGT+AGG | + | chr7_3:48195770-48195789 | Msa1107040:intron | 50.0% | |
| GCAATCCTACTGTCCAGTAG+GGG | + | chr7_3:48195772-48195791 | Msa1107040:intron | 50.0% | |
| CAATCCTACTGTCCAGTAGG+GGG | + | chr7_3:48195773-48195792 | Msa1107040:intron | 50.0% | |
| AATCCTACTGTCCAGTAGGG+GGG | + | chr7_3:48195774-48195793 | Msa1107040:intron | 50.0% | |
| !! | TGTGTTGGGCTAGTCCATAC+AGG | - | chr7_3:48195842-48195861 | None:intergenic | 50.0% |
| CAAGAATTGTTGCCACCTGG+GGG | + | chr7_3:48195860-48195879 | Msa1107040:intron | 50.0% | |
| ! | TTTTAACAACCCCCCGGGAT+TGG | - | chr7_3:48195957-48195976 | None:intergenic | 50.0% |
| CTCACCTCTTCTTTGCTACC+AGG | + | chr7_3:48196087-48196106 | Msa1107040:intron | 50.0% | |
| GCAGCACTCTTCAAAAGAGG+TGG | - | chr7_3:48196146-48196165 | None:intergenic | 50.0% | |
| GTCGTCGGAGTGATTAGAGA+CGG | - | chr7_3:48196723-48196742 | None:intergenic | 50.0% | |
| !! | AAAGTGCTGGTGTTGGATGC+CGG | - | chr7_3:48196781-48196800 | None:intergenic | 50.0% |
| ACTGAGACATACACGGACAC+TGG | - | chr7_3:48196868-48196887 | None:intergenic | 50.0% | |
| CGTTTCCCGAACATCCATAC+AGG | + | chr7_3:48197099-48197118 | Msa1107040:intron | 50.0% | |
| CCATACAGGTGTGTTCCTTG+GGG | + | chr7_3:48197113-48197132 | Msa1107040:intron | 50.0% | |
| GCGTGTTTGAAGATACCCCA+AGG | - | chr7_3:48197131-48197150 | None:intergenic | 50.0% | |
| ACGCGATACCAGGTCATCAA+TGG | + | chr7_3:48197147-48197166 | Msa1107040:CDS | 50.0% | |
| ! | GTTCCAGTCCATTGATGACC+TGG | - | chr7_3:48197158-48197177 | None:intergenic | 50.0% |
| ACTGTGAAAGCGAGAGCAAC+TGG | - | chr7_3:48197219-48197238 | None:intergenic | 50.0% | |
| GTTGCTCTCGCTTTCACAGT+TGG | + | chr7_3:48197219-48197238 | Msa1107040:CDS | 50.0% | |
| !! | GTGGCATGCAGTTTGTTGAC+TGG | + | chr7_3:48197268-48197287 | Msa1107040:CDS | 50.0% |
| !! | TGCAGTTTGTTGACTGGGCT+AGG | + | chr7_3:48197274-48197293 | Msa1107040:CDS | 50.0% |
| !! | AGTTTGTTGACTGGGCTAGG+TGG | + | chr7_3:48197277-48197296 | Msa1107040:CDS | 50.0% |
| TGTGTGAACAAGTGCGGTGG+TGG | + | chr7_3:48193039-48193058 | Msa1107040:CDS | 55.0% | |
| ! | AGGGGGAGGTGATAGTGTTG+TGG | + | chr7_3:48193164-48193183 | Msa1107040:CDS | 55.0% |
| ! | GGGGGAGGTGATAGTGTTGT+GGG | + | chr7_3:48193165-48193184 | Msa1107040:CDS | 55.0% |
| !! | AGCTTTGGAAGTGGTGGAGC+GGG | + | chr7_3:48193282-48193301 | Msa1107040:CDS | 55.0% |
| GTTGGAGGCTGCTAAGACTG+TGG | + | chr7_3:48193431-48193450 | Msa1107040:CDS | 55.0% | |
| GCCCAATGGGCGTCTAATCT+TGG | + | chr7_3:48195746-48195765 | Msa1107040:intron | 55.0% | |
| CCCCAAGATTAGACGCCCAT+TGG | - | chr7_3:48195751-48195770 | None:intergenic | 55.0% | |
| ATCCTACTGTCCAGTAGGGG+GGG | + | chr7_3:48195775-48195794 | Msa1107040:intron | 55.0% | |
| AACCTGAGACCCAGAGAGAG+AGG | + | chr7_3:48195888-48195907 | Msa1107040:intron | 55.0% | |
| GAGTCTGCTCCTCTCTCTCT+GGG | - | chr7_3:48195900-48195919 | None:intergenic | 55.0% | |
| CTTCACCAACAGGCCAATCC+CGG | + | chr7_3:48195941-48195960 | Msa1107040:intron | 55.0% | |
| TTCACCAACAGGCCAATCCC+GGG | + | chr7_3:48195942-48195961 | Msa1107040:intron | 55.0% | |
| CCCCAAGGAACACACCTGTA+TGG | - | chr7_3:48197116-48197135 | None:intergenic | 55.0% | |
| AGCATCGCCAATGGCAAAGC+AGG | + | chr7_3:48197188-48197207 | Msa1107040:CDS | 55.0% | |
| GGTGGAACCTGCTTTGCCAT+TGG | - | chr7_3:48197198-48197217 | None:intergenic | 55.0% | |
| GTGAAAGCGAGAGCAACTGG+TGG | - | chr7_3:48197216-48197235 | None:intergenic | 55.0% | |
| ACAGCAGGCTGCGACTCAGT+CGG | - | chr7_3:48193123-48193142 | None:intergenic | 60.0% | |
| ! | TTGAGAGAGACGGAGGCACG+TGG | + | chr7_3:48193387-48193406 | Msa1107040:CDS | 60.0% |
| TCCTACTGTCCAGTAGGGGG+GGG | + | chr7_3:48195776-48195795 | Msa1107040:intron | 60.0% | |
| TCAGGTTCGAATCCCCCAGG+TGG | - | chr7_3:48195875-48195894 | None:intergenic | 60.0% | |
| GTCTCAGGTTCGAATCCCCC+AGG | - | chr7_3:48195878-48195897 | None:intergenic | 60.0% | |
| CTCCTCTCTCTCTGGGTCTC+AGG | - | chr7_3:48195893-48195912 | None:intergenic | 60.0% | |
| GGAGTCTGCTCCTCTCTCTC+TGG | - | chr7_3:48195901-48195920 | None:intergenic | 60.0% | |
| AGAGAGAGGAGCAGACTCCC+AGG | + | chr7_3:48195902-48195921 | Msa1107040:intron | 60.0% | |
| GAGAGAGGAGCAGACTCCCA+GGG | + | chr7_3:48195903-48195922 | Msa1107040:intron | 60.0% | |
| GAGCAGACTCCCAGGGCTAT+AGG | + | chr7_3:48195910-48195929 | Msa1107040:intron | 60.0% | |
| GGCTTGCGACCTATAGCCCT+GGG | - | chr7_3:48195922-48195941 | None:intergenic | 60.0% | |
| AGGCTTGCGACCTATAGCCC+TGG | - | chr7_3:48195923-48195942 | None:intergenic | 60.0% | |
| GGTCGCAAGCCTTCACCAAC+AGG | + | chr7_3:48195931-48195950 | Msa1107040:intron | 60.0% | |
| !! | CGGGATTGGCCTGTTGGTGA+AGG | - | chr7_3:48195943-48195962 | None:intergenic | 60.0% |
| TCACCAACAGGCCAATCCCG+GGG | + | chr7_3:48195943-48195962 | Msa1107040:intron | 60.0% | |
| ! | GTTGACTGGGCTAGGTGGAG+TGG | + | chr7_3:48197282-48197301 | Msa1107040:CDS | 60.0% |
| ! | GGAAGTGGTGGAGCGGGAGA+TGG | + | chr7_3:48193288-48193307 | Msa1107040:CDS | 65.0% |
| ! | AGTGGTGGAGCGGGAGATGG+TGG | + | chr7_3:48193291-48193310 | Msa1107040:CDS | 65.0% |
| CCTACTGTCCAGTAGGGGGG+GGG | + | chr7_3:48195777-48195796 | Msa1107040:intron | 65.0% | |
| CTACTGTCCAGTAGGGGGGG+GGG | + | chr7_3:48195778-48195797 | Msa1107040:intron | 65.0% | |
| TACTGTCCAGTAGGGGGGGG+GGG | + | chr7_3:48195779-48195798 | Msa1107040:intron | 65.0% | |
| CACCAACAGGCCAATCCCGG+GGG | + | chr7_3:48195944-48195963 | Msa1107040:intron | 65.0% | |
| ACCAACAGGCCAATCCCGGG+GGG | + | chr7_3:48195945-48195964 | Msa1107040:intron | 65.0% | |
| GCAGGCTGCGACTCAGTCGG+TGG | - | chr7_3:48193120-48193139 | None:intergenic | 70.0% | |
| ! | GGTGGAGCGGGAGATGGTGG+CGG | + | chr7_3:48193294-48193313 | Msa1107040:CDS | 70.0% |
| CCCCCCCCCTACTGGACAGT+AGG | - | chr7_3:48195780-48195799 | None:intergenic | 70.0% | |
| ACTGTCCAGTAGGGGGGGGG+GGG | + | chr7_3:48195780-48195799 | Msa1107040:intron | 70.0% | |
| !! | ACCCCCCGGGATTGGCCTGT+TGG | - | chr7_3:48195949-48195968 | None:intergenic | 70.0% |
| !! | GGAGCGGGAGATGGTGGCGG+TGG | + | chr7_3:48193297-48193316 | Msa1107040:CDS | 75.0% |
| !! | GCGGGAGATGGTGGCGGTGG+CGG | + | chr7_3:48193300-48193319 | Msa1107040:CDS | 75.0% |
| !! | GGAGATGGTGGCGGTGGCGG+TGG | + | chr7_3:48193303-48193322 | Msa1107040:CDS | 75.0% |
| CTGTCCAGTAGGGGGGGGGG+GGG | + | chr7_3:48195781-48195800 | Msa1107040:intron | 75.0% | |
| TGTCCAGTAGGGGGGGGGGG+GGG | + | chr7_3:48195782-48195801 | Msa1107040:intron | 75.0% | |
| ! | GTCCAGTAGGGGGGGGGGGG+GGG | + | chr7_3:48195783-48195802 | Msa1107040:intron | 80.0% |
| ! | TCCAGTAGGGGGGGGGGGGG+GGG | + | chr7_3:48195784-48195803 | Msa1107040:intron | 80.0% |
| ! | CCAGTAGGGGGGGGGGGGGG+GGG | + | chr7_3:48195785-48195804 | Msa1107040:intron | 85.0% |
| ! | CAGTAGGGGGGGGGGGGGGG+GGG | + | chr7_3:48195786-48195805 | Msa1107040:intron | 85.0% |
| ! | AGTAGGGGGGGGGGGGGGGG+GGG | + | chr7_3:48195787-48195806 | Msa1107040:intron | 85.0% |
| ! | CCCCCCCCCCCCCCCCCTAC+TGG | - | chr7_3:48195788-48195807 | None:intergenic | 90.0% |
| ! | GTAGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:48195788-48195807 | Msa1107040:intron | 90.0% |
| ! | TAGGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:48195789-48195808 | Msa1107040:intron | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:48195790-48195809 | Msa1107040:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 48192692 | 48197558 | 48192692 | ID=Msa1107040;Name=Msa1107040 |
| chr7_3 | mRNA | 48192692 | 48197558 | 48192692 | ID=Msa1107040-mRNA-1;Parent=Msa1107040;Name=Msa1107040-mRNA-1;_AED=0.04;_eAED=0.04;_QI=194|1|1|1|1|1|7|244|445 |
| chr7_3 | exon | 48192692 | 48193494 | 48192692 | ID=Msa1107040-mRNA-1:exon:9834;Parent=Msa1107040-mRNA-1 |
| chr7_3 | exon | 48193900 | 48193998 | 48193900 | ID=Msa1107040-mRNA-1:exon:9835;Parent=Msa1107040-mRNA-1 |
| chr7_3 | exon | 48194191 | 48194411 | 48194191 | ID=Msa1107040-mRNA-1:exon:9836;Parent=Msa1107040-mRNA-1 |
| chr7_3 | exon | 48194627 | 48194696 | 48194627 | ID=Msa1107040-mRNA-1:exon:9837;Parent=Msa1107040-mRNA-1 |
| chr7_3 | exon | 48194785 | 48194864 | 48194785 | ID=Msa1107040-mRNA-1:exon:9838;Parent=Msa1107040-mRNA-1 |
| chr7_3 | exon | 48196109 | 48196173 | 48196109 | ID=Msa1107040-mRNA-1:exon:9839;Parent=Msa1107040-mRNA-1 |
| chr7_3 | exon | 48197121 | 48197558 | 48197121 | ID=Msa1107040-mRNA-1:exon:9840;Parent=Msa1107040-mRNA-1 |
| chr7_3 | five_prime_UTR | 48192692 | 48192885 | 48192692 | ID=Msa1107040-mRNA-1:five_prime_utr;Parent=Msa1107040-mRNA-1 |
| chr7_3 | CDS | 48192886 | 48193494 | 48192886 | ID=Msa1107040-mRNA-1:cds;Parent=Msa1107040-mRNA-1 |
| chr7_3 | CDS | 48193900 | 48193998 | 48193900 | ID=Msa1107040-mRNA-1:cds;Parent=Msa1107040-mRNA-1 |
| chr7_3 | CDS | 48194191 | 48194411 | 48194191 | ID=Msa1107040-mRNA-1:cds;Parent=Msa1107040-mRNA-1 |
| chr7_3 | CDS | 48194627 | 48194696 | 48194627 | ID=Msa1107040-mRNA-1:cds;Parent=Msa1107040-mRNA-1 |
| chr7_3 | CDS | 48194785 | 48194864 | 48194785 | ID=Msa1107040-mRNA-1:cds;Parent=Msa1107040-mRNA-1 |
| chr7_3 | CDS | 48196109 | 48196173 | 48196109 | ID=Msa1107040-mRNA-1:cds;Parent=Msa1107040-mRNA-1 |
| chr7_3 | CDS | 48197121 | 48197314 | 48197121 | ID=Msa1107040-mRNA-1:cds;Parent=Msa1107040-mRNA-1 |
| chr7_3 | three_prime_UTR | 48197315 | 48197558 | 48197315 | ID=Msa1107040-mRNA-1:three_prime_utr;Parent=Msa1107040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
