Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150500 | KEH23035.1 | 95.982 | 448 | 15 | 1 | 1 | 445 | 1 | 448 | 0.0 | 870 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150500 | sp|B9DFK5|RETIC_ARATH | 60.706 | 453 | 149 | 6 | 1 | 445 | 1 | 432 | 1.08e-172 | 494 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150500 | A0A072UB17 | 95.982 | 448 | 15 | 1 | 1 | 445 | 1 | 448 | 0.0 | 870 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0052610 | Msa1150500 | 0.802683 | 4.993018e-49 | -8.615850e-47 |
| Msa0097850 | Msa1150500 | 0.809890 | 1.513290e-50 | -8.615850e-47 |
| Msa0115390 | Msa1150500 | 0.808225 | 3.438328e-50 | -8.615850e-47 |
| Msa0615680 | Msa1150500 | 0.800159 | 1.642433e-48 | -8.615850e-47 |
| Msa0616240 | Msa1150500 | 0.844413 | 7.675657e-59 | -8.615850e-47 |
| Msa0619470 | Msa1150500 | 0.818733 | 1.680381e-52 | -8.615850e-47 |
| Msa0619510 | Msa1150500 | 0.838411 | 2.921548e-57 | -8.615850e-47 |
| Msa0659600 | Msa1150500 | 0.822761 | 1.992668e-53 | -8.615850e-47 |
| Msa0669760 | Msa1150500 | 0.805099 | 1.571865e-49 | -8.615850e-47 |
| Msa0680240 | Msa1150500 | 0.803607 | 3.216348e-49 | -8.615850e-47 |
| Msa0699570 | Msa1150500 | 0.841954 | 3.473759e-58 | -8.615850e-47 |
| Msa0780930 | Msa1150500 | 0.806920 | 6.508289e-50 | -8.615850e-47 |
| Msa0824640 | Msa1150500 | 0.804142 | 2.489244e-49 | -8.615850e-47 |
| Msa0121820 | Msa1150500 | 0.815017 | 1.146771e-51 | -8.615850e-47 |
| Msa0152840 | Msa1150500 | 0.838468 | 2.825719e-57 | -8.615850e-47 |
| Msa0166750 | Msa1150500 | 0.804660 | 1.942135e-49 | -8.615850e-47 |
| Msa0167480 | Msa1150500 | 0.812720 | 3.678036e-51 | -8.615850e-47 |
| Msa0226460 | Msa1150500 | 0.811363 | 7.266742e-51 | -8.615850e-47 |
| Msa0230150 | Msa1150500 | 0.803136 | 4.025976e-49 | -8.615850e-47 |
| Msa0367470 | Msa1150500 | 0.823403 | 1.411734e-53 | -8.615850e-47 |
| Msa0416400 | Msa1150500 | 0.811136 | 8.139681e-51 | -8.615850e-47 |
| Msa0437690 | Msa1150500 | -0.813231 | 2.841385e-51 | -8.615850e-47 |
| Msa0443390 | Msa1150500 | 0.827949 | 1.179230e-54 | -8.615850e-47 |
| Msa0460020 | Msa1150500 | 0.827663 | 1.381290e-54 | -8.615850e-47 |
| Msa1019240 | Msa1150500 | 0.818531 | 1.867539e-52 | -8.615850e-47 |
| Msa1019260 | Msa1150500 | 0.809562 | 1.779631e-50 | -8.615850e-47 |
| Msa1022970 | Msa1150500 | 0.857866 | 1.218975e-62 | -8.615850e-47 |
| Msa1054730 | Msa1150500 | 0.813524 | 2.450496e-51 | -8.615850e-47 |
| Msa1061720 | Msa1150500 | 0.843606 | 1.263630e-58 | -8.615850e-47 |
| Msa1104210 | Msa1150500 | 0.824986 | 5.994770e-54 | -8.615850e-47 |
| Msa1107040 | Msa1150500 | 0.833622 | 4.797112e-56 | -8.615850e-47 |
| Msa0304660 | Msa1150500 | 0.800049 | 1.729660e-48 | -8.615850e-47 |
| Msa0331700 | Msa1150500 | 0.802275 | 6.061724e-49 | -8.615850e-47 |
| Msa0347680 | Msa1150500 | 0.822427 | 2.382443e-53 | -8.615850e-47 |
| Msa1131560 | Msa1150500 | 0.840564 | 8.060077e-58 | -8.615850e-47 |
| Msa1150500 | Msa1166870 | 0.829441 | 5.138077e-55 | -8.615850e-47 |
| Msa1150500 | Msa1173900 | 0.801735 | 7.825552e-49 | -8.615850e-47 |
| Msa1150500 | Msa1208890 | -0.815504 | 8.936175e-52 | -8.615850e-47 |
| Msa1150500 | Msa1259070 | -0.803373 | 3.595798e-49 | -8.615850e-47 |
| Msa1150500 | Msa1310690 | 0.800054 | 1.725587e-48 | -8.615850e-47 |
| Msa1150500 | Msa1335940 | 0.807254 | 5.529358e-50 | -8.615850e-47 |
| Msa1150500 | Msa1400610 | -0.818734 | 1.679275e-52 | -8.615850e-47 |
| Msa1150500 | Msa1454450 | 0.822289 | 2.564697e-53 | -8.615850e-47 |
| Msa1150500 | Msa1461490 | 0.801013 | 1.100055e-48 | -8.615850e-47 |
| Msa0506400 | Msa1150500 | 0.804100 | 2.540385e-49 | -8.615850e-47 |
| Msa0508590 | Msa1150500 | 0.822010 | 2.977312e-53 | -8.615850e-47 |
| Msa0508630 | Msa1150500 | 0.800243 | 1.579016e-48 | -8.615850e-47 |
| Msa0508870 | Msa1150500 | 0.819004 | 1.458422e-52 | -8.615850e-47 |
| Msa0509950 | Msa1150500 | -0.811752 | 5.983795e-51 | -8.615850e-47 |
| Msa0576940 | Msa1150500 | 0.805659 | 1.199760e-49 | -8.615850e-47 |
| Msa0848530 | Msa1150500 | 0.810235 | 1.274778e-50 | -8.615850e-47 |
| Msa0864010 | Msa1150500 | 0.810398 | 1.175941e-50 | -8.615850e-47 |
| Msa0944610 | Msa1150500 | 0.820234 | 7.640312e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150500 | MtrunA17_Chr7g0240091 | 95.982 | 448 | 15 | 1 | 1 | 445 | 1 | 448 | 0.0 | 868 |
| Msa1150500 | MtrunA17_Chr2g0320711 | 74.476 | 286 | 73 | 0 | 160 | 445 | 150 | 435 | 4.36e-162 | 464 |
| Msa1150500 | MtrunA17_Chr4g0020011 | 30.693 | 303 | 185 | 9 | 150 | 445 | 93 | 377 | 3.40e-35 | 134 |
| Msa1150500 | MtrunA17_Chr4g0039291 | 30.841 | 321 | 191 | 9 | 132 | 445 | 92 | 388 | 2.69e-33 | 129 |
| Msa1150500 | MtrunA17_Chr3g0090071 | 30.584 | 291 | 181 | 8 | 161 | 445 | 112 | 387 | 8.99e-30 | 119 |
| Msa1150500 | MtrunA17_Chr7g0245291 | 33.188 | 229 | 133 | 8 | 220 | 445 | 114 | 325 | 2.53e-27 | 112 |
| Msa1150500 | MtrunA17_Chr7g0245261 | 34.061 | 229 | 131 | 8 | 220 | 445 | 107 | 318 | 3.99e-25 | 105 |
| Msa1150500 | MtrunA17_Chr3g0114241 | 26.882 | 279 | 194 | 5 | 174 | 445 | 441 | 716 | 1.49e-24 | 107 |
| Msa1150500 | MtrunA17_Chr2g0318431 | 30.137 | 219 | 137 | 5 | 222 | 438 | 241 | 445 | 1.80e-19 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150500 | AT2G37860.3 | 60.706 | 453 | 149 | 6 | 1 | 445 | 1 | 432 | 1.09e-173 | 494 |
| Msa1150500 | AT2G37860.4 | 60.706 | 453 | 149 | 6 | 1 | 445 | 1 | 432 | 1.09e-173 | 494 |
| Msa1150500 | AT5G22790.1 | 74.324 | 296 | 75 | 1 | 151 | 445 | 138 | 433 | 5.58e-168 | 479 |
| Msa1150500 | AT2G37860.2 | 56.522 | 368 | 131 | 6 | 1 | 360 | 1 | 347 | 4.22e-118 | 349 |
| Msa1150500 | AT2G37860.1 | 56.522 | 368 | 131 | 6 | 1 | 360 | 1 | 347 | 4.22e-118 | 349 |
| Msa1150500 | AT5G12470.1 | 29.568 | 301 | 193 | 7 | 151 | 445 | 96 | 383 | 4.22e-34 | 132 |
| Msa1150500 | AT3G08640.1 | 34.008 | 247 | 141 | 8 | 203 | 445 | 94 | 322 | 1.01e-31 | 124 |
| Msa1150500 | AT3G08630.1 | 34.061 | 229 | 133 | 6 | 220 | 445 | 106 | 319 | 6.21e-31 | 122 |
| Msa1150500 | AT3G56140.2 | 31.667 | 240 | 143 | 6 | 219 | 445 | 258 | 489 | 2.90e-25 | 108 |
| Msa1150500 | AT3G56140.1 | 31.799 | 239 | 142 | 6 | 220 | 445 | 478 | 708 | 3.59e-25 | 109 |
| Msa1150500 | AT3G56140.3 | 31.799 | 239 | 142 | 6 | 220 | 445 | 478 | 708 | 3.59e-25 | 109 |
| Msa1150500 | AT2G40400.2 | 29.371 | 286 | 178 | 8 | 174 | 445 | 424 | 699 | 1.96e-24 | 107 |
| Msa1150500 | AT2G40400.1 | 29.371 | 286 | 178 | 8 | 174 | 445 | 424 | 699 | 1.96e-24 | 107 |
| Msa1150500 | AT5G24690.1 | 30.415 | 217 | 139 | 3 | 222 | 438 | 240 | 444 | 9.98e-21 | 95.1 |
| Msa1150500 | AT2G40400.3 | 29.237 | 236 | 144 | 7 | 174 | 395 | 424 | 650 | 1.91e-17 | 85.5 |
Find 141 sgRNAs with CRISPR-Local
Find 431 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGACCTCAAGAAAATTTA+TGG | 0.108318 | 7_4:-33959548 | None:intergenic |
| GTTGCTTCTTCTTAGATATT+TGG | 0.155876 | 7_4:+33955218 | Msa1150500:CDS |
| GCGGGTTGTTCATCGAATTT+TGG | 0.160333 | 7_4:+33954643 | Msa1150500:CDS |
| AGCATTTGTTCCCTCTATTT+TGG | 0.179965 | 7_4:+33959670 | Msa1150500:three_prime_UTR |
| GGGAAAGGAACAGAAAATTT+TGG | 0.206843 | 7_4:+33954939 | Msa1150500:CDS |
| TTTGAAGAGTGCTGCTCTTT+GGG | 0.218226 | 7_4:+33958350 | Msa1150500:CDS |
| CCTTAATCTTTGGTCATTAT+AGG | 0.231950 | 7_4:-33959599 | None:intergenic |
| TGGAAAACCATCAATATCTA+AGG | 0.254488 | 7_4:+33955784 | Msa1150500:CDS |
| CCTATAATGACCAAAGATTA+AGG | 0.257079 | 7_4:+33959599 | Msa1150500:three_prime_UTR |
| AAAAGAGAGGCAAAGACTTT+TGG | 0.264746 | 7_4:+33955672 | Msa1150500:CDS |
| AACAGTAGACTTCATCATTA+AGG | 0.272535 | 7_4:-33959700 | None:intergenic |
| GGATTTGGATGTGGTATTAT+AGG | 0.277977 | 7_4:+33956249 | Msa1150500:CDS |
| ATCCATGCACCCTTAATCTT+TGG | 0.311778 | 7_4:-33959609 | None:intergenic |
| ATTTGAGGTGTGATCTGTTT+TGG | 0.324985 | 7_4:+33954498 | Msa1150500:five_prime_UTR |
| GTCGGGAAAGAAGCTGGTTT+GGG | 0.334014 | 7_4:+33954685 | Msa1150500:CDS |
| TCTTCTTAGATATTTGGATT+TGG | 0.336682 | 7_4:+33955224 | Msa1150500:CDS |
| TCCATGCAGGTGTGTTCCTT+GGG | 0.357793 | 7_4:+33959283 | Msa1150500:intron |
| AGTAGTTATTTATTAAGAAT+TGG | 0.365583 | 7_4:+33954559 | Msa1150500:five_prime_UTR |
| ATCCATGCAGGTGTGTTCCT+TGG | 0.370707 | 7_4:+33959282 | Msa1150500:intron |
| TTGGCACCTTATGCTCGAAT+TGG | 0.371610 | 7_4:+33955764 | Msa1150500:CDS |
| ATGTATGCAGGTGTTGGATT+TGG | 0.374444 | 7_4:+33956234 | Msa1150500:CDS |
| AAATTTCTACCTCAGGTTCA+TGG | 0.374495 | 7_4:+33959575 | Msa1150500:three_prime_UTR |
| AGGAATCCCTTAGATATTGA+TGG | 0.391446 | 7_4:-33955791 | None:intergenic |
| CACTTGTTCACACAAATTGC+TGG | 0.394745 | 7_4:-33954784 | None:intergenic |
| TGTAAGTACGATAGAATTAT+CGG | 0.396315 | 7_4:+33954894 | Msa1150500:CDS |
| GTTTCTTTGTATTGTTGAGC+TGG | 0.401924 | 7_4:+33954520 | Msa1150500:five_prime_UTR |
| TATGTTGCAGATCTTCTTGT+TGG | 0.403747 | 7_4:+33955710 | Msa1150500:CDS |
| ATCTAAGAAGAAGCAACTTC+GGG | 0.404666 | 7_4:-33955212 | None:intergenic |
| ATCATCATTTCCAACACTCT+TGG | 0.405442 | 7_4:-33954977 | None:intergenic |
| TGTCGGGAAAGAAGCTGGTT+TGG | 0.407345 | 7_4:+33954684 | Msa1150500:CDS |
| GATAATGGTGTTGTGTTTGA+TGG | 0.408754 | 7_4:+33954997 | Msa1150500:CDS |
| AGCTTTGGAAGTGGCGGAGC+AGG | 0.413212 | 7_4:+33955036 | Msa1150500:CDS |
| GGAGATGGCGGTGGTGGCGG+TGG | 0.416567 | 7_4:+33955057 | Msa1150500:CDS |
| CTTATGCAGCTTTACCTAGC+AGG | 0.418534 | 7_4:+33955831 | Msa1150500:CDS |
| TTATCATGTTTGCAATGCCT+TGG | 0.420614 | 7_4:-33956272 | None:intergenic |
| GCAGGTTCCACCAGTTGCTC+TGG | 0.421142 | 7_4:+33959377 | Msa1150500:CDS |
| GGAGCAGGAGATGGCGGTGG+TGG | 0.435083 | 7_4:+33955051 | Msa1150500:CDS |
| GCAGGAGATGGCGGTGGTGG+CGG | 0.436118 | 7_4:+33955054 | Msa1150500:CDS |
| GACGGTTGTTAATGTTGCTT+TGG | 0.439449 | 7_4:+33955733 | Msa1150500:CDS |
| GTGGCATGCAGTTTGTTGAC+TGG | 0.441374 | 7_4:+33959439 | Msa1150500:CDS |
| ACTGTGAAAGCCAGAGCAAC+TGG | 0.449407 | 7_4:-33959387 | None:intergenic |
| GTGCATGGATTGGTTTAGAA+AGG | 0.454355 | 7_4:+33959622 | Msa1150500:three_prime_UTR |
| TGTTGCTTTGGTTGGAATGT+TGG | 0.454554 | 7_4:+33955745 | Msa1150500:CDS |
| TCTTAGATATTTGGATTTGG+AGG | 0.455983 | 7_4:+33955227 | Msa1150500:CDS |
| GTTGTTAATGTTGCTTTGGT+TGG | 0.456847 | 7_4:+33955737 | Msa1150500:CDS |
| AGTGGTGGTAATGGAAGCTT+TGG | 0.457520 | 7_4:+33955021 | Msa1150500:CDS |
| AAGATTAAGGGTGCATGGAT+TGG | 0.457694 | 7_4:+33959612 | Msa1150500:three_prime_UTR |
| TTCTACCACAAAACTACCCC+AGG | 0.467705 | 7_4:-33954595 | None:intergenic |
| AAGGTTAATTACCAAAATAG+AGG | 0.471176 | 7_4:-33959681 | None:intergenic |
| AGCATCGCCAATGGCAAAGC+AGG | 0.473131 | 7_4:+33959359 | Msa1150500:CDS |
| GTTGCTCTGGCTTTCACAGT+TGG | 0.475783 | 7_4:+33959390 | Msa1150500:CDS |
| GCAGGTGTTGGATTTGGATG+TGG | 0.479236 | 7_4:+33956240 | Msa1150500:CDS |
| TATCTAAGAAGAAGCAACTT+CGG | 0.479521 | 7_4:-33955213 | None:intergenic |
| TCAATATCTAAGGGATTCCT+TGG | 0.479546 | 7_4:+33955794 | Msa1150500:CDS |
| TGCAGTTTGTTGACTGGGCT+AGG | 0.482177 | 7_4:+33959445 | Msa1150500:CDS |
| CATCAATGGACTGGAACGTT+TGG | 0.482709 | 7_4:+33959332 | Msa1150500:CDS |
| AAGTGATAGTGTTGTGGGAA+AGG | 0.483899 | 7_4:+33954924 | Msa1150500:CDS |
| GGTGGAACCTGCTTTGCCAT+TGG | 0.486100 | 7_4:-33959366 | None:intergenic |
| GGTGTTGTGTTTGATGGTAG+TGG | 0.488998 | 7_4:+33955003 | Msa1150500:CDS |
| ACTTGGAACATACTTCTTCA+AGG | 0.489407 | 7_4:+33956118 | Msa1150500:CDS |
| GAAGCATAAATTTCTACCTC+AGG | 0.491059 | 7_4:+33959568 | Msa1150500:three_prime_UTR |
| CTCTTCAAAAGAGGTGGTAC+AGG | 0.498159 | 7_4:-33958336 | None:intergenic |
| GCAGCCTCCAACATATCAAA+AGG | 0.499434 | 7_4:-33955174 | None:intergenic |
| TATGCTTCGCAATCGAATGC+TGG | 0.506531 | 7_4:+33955402 | Msa1150500:CDS |
| ACGCGATACCAGGTCATCAA+TGG | 0.507241 | 7_4:+33959318 | Msa1150500:CDS |
| GTAAGTGTCGGGAAAGAAGC+TGG | 0.512196 | 7_4:+33954679 | Msa1150500:CDS |
| GGTATAATGTATGCAGGTGT+TGG | 0.513052 | 7_4:+33956228 | Msa1150500:CDS |
| TTGAAGAGTGCTGCTCTTTG+GGG | 0.513979 | 7_4:+33958351 | Msa1150500:CDS |
| TACGATAGAATTATCGGAAG+GGG | 0.518047 | 7_4:+33954900 | Msa1150500:CDS |
| TGGCATGCAGTTTGTTGACT+GGG | 0.519280 | 7_4:+33959440 | Msa1150500:CDS |
| GGAAGTGGCGGAGCAGGAGA+TGG | 0.519395 | 7_4:+33955042 | Msa1150500:CDS |
| ATGTTGCAGATCTTCTTGTT+GGG | 0.519882 | 7_4:+33955711 | Msa1150500:CDS |
| TTTGATGGTAGTGGTGGTAA+TGG | 0.523492 | 7_4:+33955012 | Msa1150500:CDS |
| TGGCTCGAGTTGTAAGTGTC+GGG | 0.526472 | 7_4:+33954668 | Msa1150500:CDS |
| TGTGTGAACAAGTGCGGTGG+TGG | 0.526944 | 7_4:+33954793 | Msa1150500:CDS |
| CAAAATGAATGACACAATAG+TGG | 0.526977 | 7_4:-33954056 | None:intergenic |
| ATCTTCAAACACGCGATACC+AGG | 0.527301 | 7_4:+33959308 | Msa1150500:CDS |
| GACCAAAGATTAAGGGTGCA+TGG | 0.530261 | 7_4:+33959607 | Msa1150500:three_prime_UTR |
| GAATGACACAATAGTGGCAG+TGG | 0.532384 | 7_4:-33954050 | None:intergenic |
| CTATAATGACCAAAGATTAA+GGG | 0.533190 | 7_4:+33959600 | Msa1150500:three_prime_UTR |
| GATCTCATGGCAAATCCTAA+AGG | 0.535500 | 7_4:-33955373 | None:intergenic |
| GTGGCTCGAGTTGTAAGTGT+CGG | 0.536736 | 7_4:+33954667 | Msa1150500:CDS |
| TTCCAGGGTATAATGTATGC+AGG | 0.540927 | 7_4:+33956222 | Msa1150500:intron |
| CCTCCAACATATCAAAAGGA+AGG | 0.542894 | 7_4:-33955170 | None:intergenic |
| AGTGTTGGAAATGATGATAA+TGG | 0.543927 | 7_4:+33954982 | Msa1150500:CDS |
| GTTGGAGGCTGCTAAGACTG+TGG | 0.546763 | 7_4:+33955185 | Msa1150500:CDS |
| AATTCTATCGTACTTACAGC+AGG | 0.548443 | 7_4:-33954889 | None:intergenic |
| GGCGGAGCAGGAGATGGCGG+TGG | 0.549808 | 7_4:+33955048 | Msa1150500:CDS |
| GGATGTGGTATTATAGGCCA+AGG | 0.552476 | 7_4:+33956255 | Msa1150500:CDS |
| CATGTGCATGTCGCAGCCGC+CGG | 0.556713 | 7_4:+33954855 | Msa1150500:CDS |
| TGCAGATCTTCTTGTTGGGA+CGG | 0.558342 | 7_4:+33955715 | Msa1150500:CDS |
| GTATTTGAAGCTGAAAGGCC+AGG | 0.561879 | 7_4:+33956071 | Msa1150500:CDS |
| GTTGACTGGGCTAGGTGGAG+TGG | 0.562706 | 7_4:+33959453 | Msa1150500:CDS |
| ACAGCAGGCTGTGAATCAGC+CGG | 0.563170 | 7_4:-33954874 | None:intergenic |
| GGAAAACCATCAATATCTAA+GGG | 0.572801 | 7_4:+33955785 | Msa1150500:CDS |
| ATACCAGGTCATCAATGGAC+TGG | 0.578972 | 7_4:+33959323 | Msa1150500:CDS |
| AAGCATAGAACATGATCTCA+TGG | 0.582119 | 7_4:-33955386 | None:intergenic |
| TGCACAGAAAATCTACATCC+TGG | 0.582715 | 7_4:-33956089 | None:intergenic |
| GCAGTGTATTTGAAGCTGAA+AGG | 0.583183 | 7_4:+33956066 | Msa1150500:intron |
| TTTGCAAACAATGTTTATGG+TGG | 0.584674 | 7_4:+33959420 | Msa1150500:CDS |
| AGTGGCGGAGCAGGAGATGG+CGG | 0.585593 | 7_4:+33955045 | Msa1150500:CDS |
| GGTAATGGAAGCTTTGGAAG+TGG | 0.586739 | 7_4:+33955027 | Msa1150500:CDS |
| AATGACACAATAGTGGCAGT+GGG | 0.589556 | 7_4:-33954049 | None:intergenic |
| AGGTTAATTACCAAAATAGA+GGG | 0.589657 | 7_4:-33959680 | None:intergenic |
| GAGTCGGATTCCAAGAGTGT+TGG | 0.595342 | 7_4:+33954967 | Msa1150500:CDS |
| AGAGCAGCACTCTTCAAAAG+AGG | 0.596155 | 7_4:-33958345 | None:intergenic |
| CCATGCAGGTGTGTTCCTTG+GGG | 0.596783 | 7_4:+33959284 | Msa1150500:intron |
| GTTCCAGTCCATTGATGACC+TGG | 0.603834 | 7_4:-33959326 | None:intergenic |
| CTCCAACATATCAAAAGGAA+GGG | 0.605068 | 7_4:-33955169 | None:intergenic |
| TAGTGGCAGTGGGGAAGATG+CGG | 0.605898 | 7_4:-33954039 | None:intergenic |
| GTTGCTGAATATCAAAAGAG+AGG | 0.607008 | 7_4:+33955659 | Msa1150500:CDS |
| AGTACGATAGAATTATCGGA+AGG | 0.623310 | 7_4:+33954898 | Msa1150500:CDS |
| ATGACGAGTAGTAACCTGCT+AGG | 0.624592 | 7_4:-33955845 | None:intergenic |
| TTGGAGGCTGCTAAGACTGT+GGG | 0.625642 | 7_4:+33955186 | Msa1150500:CDS |
| AAGCTTTCTGCATATTACCA+AGG | 0.627406 | 7_4:-33955811 | None:intergenic |
| GATGATGACGACAAAGATGA+GGG | 0.627798 | 7_4:+33955084 | Msa1150500:CDS |
| GAGTGCGATGTTGTTGAATG+AGG | 0.634613 | 7_4:+33954753 | Msa1150500:CDS |
| GTTGTGTTTGATGGTAGTGG+TGG | 0.634972 | 7_4:+33955006 | Msa1150500:CDS |
| CGAGGTATTGAGAGAGACAG+AGG | 0.635942 | 7_4:+33955134 | Msa1150500:CDS |
| TTTGGTAGAAGCATCGCCAA+TGG | 0.639236 | 7_4:+33959350 | Msa1150500:CDS |
| AATGGAAGCTTTGGAAGTGG+CGG | 0.641690 | 7_4:+33955030 | Msa1150500:CDS |
| GTACGATAGAATTATCGGAA+GGG | 0.641710 | 7_4:+33954899 | Msa1150500:CDS |
| GCAGGCTGTGAATCAGCCGG+CGG | 0.654169 | 7_4:-33954871 | None:intergenic |
| TGATGATGACGACAAAGATG+AGG | 0.654615 | 7_4:+33955083 | Msa1150500:CDS |
| ATTATAGGTCCATGAACCTG+AGG | 0.655481 | 7_4:-33959584 | None:intergenic |
| CAGGAACATAAAGACATCAG+AGG | 0.657150 | 7_4:+33958305 | Msa1150500:intron |
| GTGAAAGCCAGAGCAACTGG+TGG | 0.659608 | 7_4:-33959384 | None:intergenic |
| ACGATAGAATTATCGGAAGG+GGG | 0.659659 | 7_4:+33954901 | Msa1150500:CDS |
| GCAGCACTCTTCAAAAGAGG+TGG | 0.662234 | 7_4:-33958342 | None:intergenic |
| TCGGGAAAGAAGCTGGTTTG+GGG | 0.662291 | 7_4:+33954686 | Msa1150500:CDS |
| TCTACCACAAAACTACCCCA+GGG | 0.662839 | 7_4:-33954594 | None:intergenic |
| TGATGACGACAAAGATGAGG+GGG | 0.669601 | 7_4:+33955086 | Msa1150500:CDS |
| ATGATGACGACAAAGATGAG+GGG | 0.689880 | 7_4:+33955085 | Msa1150500:CDS |
| AGTTTGTTGACTGGGCTAGG+TGG | 0.701181 | 7_4:+33959448 | Msa1150500:CDS |
| GCGTGTTTGAAGATACCCCA+AGG | 0.708255 | 7_4:-33959299 | None:intergenic |
| GCAATTTGTGTGAACAAGTG+CGG | 0.709591 | 7_4:+33954787 | Msa1150500:CDS |
| ACATGATAATGACTGCAAAG+CGG | 0.721151 | 7_4:+33956286 | Msa1150500:CDS |
| TTGAGAGAGACAGAGGCACG+CGG | 0.729175 | 7_4:+33955141 | Msa1150500:CDS |
| GCCAATGCTAAAATACGACG+AGG | 0.732644 | 7_4:+33955116 | Msa1150500:CDS |
| ATTTGTGTGAACAAGTGCGG+TGG | 0.742292 | 7_4:+33954790 | Msa1150500:CDS |
| ATGACACAATAGTGGCAGTG+GGG | 0.743064 | 7_4:-33954048 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAATTAATGAAAGTA+AGG | - | chr7_4:33954168-33954187 | None:intergenic | 10.0% |
| !! | TATATATATATATATATCAG+CGG | - | chr7_4:33956604-33956623 | None:intergenic | 10.0% |
| !! | TTAATTTACATTAAAATCAA+TGG | - | chr7_4:33957331-33957350 | None:intergenic | 10.0% |
| !!! | TTGATTTTAATGTAAATTAA+TGG | + | chr7_4:33956696-33956715 | Msa1150500:intron | 10.0% |
| !!! | TCAATTAAATTCATTTTTTA+TGG | + | chr7_4:33957025-33957044 | Msa1150500:intron | 10.0% |
| !!! | CAATTAAATTCATTTTTTAT+GGG | + | chr7_4:33957026-33957045 | Msa1150500:intron | 10.0% |
| !!! | AAGAATAAAACTTTTTTTTA+AGG | - | chr7_4:33957075-33957094 | None:intergenic | 10.0% |
| !!! | TTGATTTTAATGTAAATTAA+TGG | - | chr7_4:33956696-33956715 | None:intergenic | 10.0% |
| !! | TTAATTTACATTAAAATCAA+TGG | + | chr7_4:33957331-33957350 | Msa1150500:intron | 10.0% |
| !! | AATAACTGAATAAAAATAAA+TGG | - | chr7_4:33958448-33958467 | None:intergenic | 10.0% |
| !!! | TTTATTTTTATTCAGTTATT+AGG | + | chr7_4:33958448-33958467 | Msa1150500:intron | 10.0% |
| !!! | TAACAAATACATTTTTCTTT+GGG | - | chr7_4:33953666-33953685 | None:intergenic | 15.0% |
| !!! | TTAACAAATACATTTTTCTT+TGG | - | chr7_4:33953667-33953686 | None:intergenic | 15.0% |
| !!! | AGAAAAATGTATTTGTTAAT+AGG | + | chr7_4:33953668-33953687 | Msa1150500:intron | 15.0% |
| !!! | GAAAAATGTATTTGTTAATA+GGG | + | chr7_4:33953669-33953688 | Msa1150500:intron | 15.0% |
| !! | AAACTAAAATCATCAAAAAT+GGG | - | chr7_4:33954198-33954217 | None:intergenic | 15.0% |
| !! | TAAACTAAAATCATCAAAAA+TGG | - | chr7_4:33954199-33954218 | None:intergenic | 15.0% |
| !! | GTAAGATATAAAATGAAAAA+GGG | - | chr7_4:33954317-33954336 | None:intergenic | 15.0% |
| !! | AGTAAGATATAAAATGAAAA+AGG | - | chr7_4:33954318-33954337 | None:intergenic | 15.0% |
| !! | AGTAGTTATTTATTAAGAAT+TGG | + | chr7_4:33954559-33954578 | Msa1150500:five_prime_UTR | 15.0% |
| !!! | TATGTTTGTATAATTTTCAA+TGG | + | chr7_4:33955495-33955514 | Msa1150500:intron | 15.0% |
| !! | TATATATATATATATAGAGG+AGG | + | chr7_4:33956622-33956641 | Msa1150500:intron | 15.0% |
| !! | ATATATATATATATAGAGGA+GGG | + | chr7_4:33956623-33956642 | Msa1150500:intron | 15.0% |
| !! | TTTATTCAATAGAAGATTAA+AGG | - | chr7_4:33957156-33957175 | None:intergenic | 15.0% |
| !! | TAATCTTCTATTGAATAAAA+TGG | + | chr7_4:33957157-33957176 | Msa1150500:intron | 15.0% |
| !! | TGCTGTTAAATTAAATAAAA+AGG | - | chr7_4:33957194-33957213 | None:intergenic | 15.0% |
| !! | TATATATATATATATGAGGA+GGG | - | chr7_4:33957404-33957423 | None:intergenic | 15.0% |
| !! | ATATATATATATATATGAGG+AGG | - | chr7_4:33957405-33957424 | None:intergenic | 15.0% |
| !! | TACAAAATAATGAAGTATGA+GGG | - | chr7_4:33953837-33953856 | None:intergenic | 20.0% |
| !! | GTAGAAAATGGTTTAATTAA+AGG | - | chr7_4:33954125-33954144 | None:intergenic | 20.0% |
| !!! | AGAAAAGTTAGAATTTTTGT+AGG | + | chr7_4:33954614-33954633 | Msa1150500:five_prime_UTR | 20.0% |
| !!! | TTAGAATTTTTGTAGGAAAA+TGG | + | chr7_4:33954621-33954640 | Msa1150500:exon | 20.0% |
| !! | TTACATTAAAATCAATGGTT+AGG | - | chr7_4:33956691-33956710 | None:intergenic | 20.0% |
| !! | AATCTTGATTCTCAAATTAA+TGG | + | chr7_4:33956791-33956810 | Msa1150500:intron | 20.0% |
| !!! | TTTAGGTTATCTATATGAAT+AGG | + | chr7_4:33956945-33956964 | Msa1150500:intron | 20.0% |
| !! | CTATACAAAAACAATAAACA+AGG | + | chr7_4:33957526-33957545 | Msa1150500:intron | 20.0% |
| !!! | TTATTTTCTCAAATTATCAC+TGG | + | chr7_4:33958957-33958976 | Msa1150500:intron | 20.0% |
| !! | ACATTTTTCTTTGGGTATAT+TGG | - | chr7_4:33953658-33953677 | None:intergenic | 25.0% |
| ! | GTACAAAATAATGAAGTATG+AGG | - | chr7_4:33953838-33953857 | None:intergenic | 25.0% |
| ! | GGGATATTTATTAAGATTCT+GGG | - | chr7_4:33953860-33953879 | None:intergenic | 25.0% |
| ! | TGGGATATTTATTAAGATTC+TGG | - | chr7_4:33953861-33953880 | None:intergenic | 25.0% |
| ! | TATTTATATTTCGTGTGTGT+GGG | - | chr7_4:33953889-33953908 | None:intergenic | 25.0% |
| !!! | TTTATATATGGTTTTGGAGA+TGG | - | chr7_4:33953991-33954010 | None:intergenic | 25.0% |
| !!! | TTTGGGTTTATATATGGTTT+TGG | - | chr7_4:33953997-33954016 | None:intergenic | 25.0% |
| !! | AAGCAATTTGGGTTTATATA+TGG | - | chr7_4:33954003-33954022 | None:intergenic | 25.0% |
| ! | TATATAAACCCAAATTGCTT+AGG | + | chr7_4:33954003-33954022 | Msa1150500:intron | 25.0% |
| !! | CATTCATTTTGTCTCAATTA+AGG | + | chr7_4:33954068-33954087 | Msa1150500:five_prime_UTR | 25.0% |
| ! | TAAAGGAAAGAGAAGAAAAA+GGG | - | chr7_4:33954108-33954127 | None:intergenic | 25.0% |
| ! | TTAAAGGAAAGAGAAGAAAA+AGG | - | chr7_4:33954109-33954128 | None:intergenic | 25.0% |
| ! | GTAAGGTAGAAAATGTAAAA+GGG | - | chr7_4:33954151-33954170 | None:intergenic | 25.0% |
| ! | AGTAAGGTAGAAAATGTAAA+AGG | - | chr7_4:33954152-33954171 | None:intergenic | 25.0% |
| !!! | AAAAAGGGTATCAAGAAAAA+GGG | - | chr7_4:33954302-33954321 | None:intergenic | 25.0% |
| ! | TATATCTTACTTTCATTTCC+TGG | + | chr7_4:33954327-33954346 | Msa1150500:intron | 25.0% |
| ! | ATATCTTACTTTCATTTCCT+GGG | + | chr7_4:33954328-33954347 | Msa1150500:intron | 25.0% |
| ! | TGTAAGTACGATAGAATTAT+CGG | + | chr7_4:33954894-33954913 | Msa1150500:CDS | 25.0% |
| ! | TCTTCTTAGATATTTGGATT+TGG | + | chr7_4:33955224-33955243 | Msa1150500:CDS | 25.0% |
| ! | TTTATGATATTCTCAATTGC+AGG | + | chr7_4:33955339-33955358 | Msa1150500:intron | 25.0% |
| ! | TTATGATATTCTCAATTGCA+GGG | + | chr7_4:33955340-33955359 | Msa1150500:intron | 25.0% |
| ! | AAATATTGACACCAAAAACA+AGG | - | chr7_4:33955884-33955903 | None:intergenic | 25.0% |
| ! | TGAGTGCAAGATTATTTATT+TGG | + | chr7_4:33956144-33956163 | Msa1150500:intron | 25.0% |
| ! | TAACTCTTTATACTTACTCT+TGG | - | chr7_4:33957367-33957386 | None:intergenic | 25.0% |
| ! | TAAAATCAATGGTTAGGATT+TGG | - | chr7_4:33956685-33956704 | None:intergenic | 25.0% |
| !!! | TTTCTGTGTAGTTGTTATTT+AGG | - | chr7_4:33956773-33956792 | None:intergenic | 25.0% |
| !! | TCATTCATTGTTTCTTATTG+AGG | - | chr7_4:33956851-33956870 | None:intergenic | 25.0% |
| ! | AATATGCAGAAAAATGATCA+CGG | - | chr7_4:33956920-33956939 | None:intergenic | 25.0% |
| !! | TTTCTGCATATTTCGATTTT+AGG | + | chr7_4:33956928-33956947 | Msa1150500:intron | 25.0% |
| ! | TTATCTATATGAATAGGCAA+AGG | + | chr7_4:33956951-33956970 | Msa1150500:intron | 25.0% |
| ! | CGTGAAAACAATCTAAATAA+TGG | - | chr7_4:33957237-33957256 | None:intergenic | 25.0% |
| ! | AGTAATAAAACCTTATGCTA+GGG | + | chr7_4:33957284-33957303 | Msa1150500:intron | 25.0% |
| ! | TTACATTAAAATCAATGGCT+AGG | + | chr7_4:33957336-33957355 | Msa1150500:intron | 25.0% |
| ! | TAACTCTTTATACTTACTCT+TGG | + | chr7_4:33957367-33957386 | Msa1150500:intron | 25.0% |
| !!! | TATTTACTGAGAAGTATTCA+AGG | + | chr7_4:33957442-33957461 | Msa1150500:intron | 25.0% |
| ! | AATTGACACTTATATCAATC+AGG | - | chr7_4:33957483-33957502 | None:intergenic | 25.0% |
| !! | TAGAGCTTTATATGAAAAGT+GGG | - | chr7_4:33957509-33957528 | None:intergenic | 25.0% |
| !! | ATAGAGCTTTATATGAAAAG+TGG | - | chr7_4:33957510-33957529 | None:intergenic | 25.0% |
| ! | TAAACAAGGAATGTTTGAAT+TGG | + | chr7_4:33957540-33957559 | Msa1150500:intron | 25.0% |
| ! | TGACTTCATTATATGAACTA+AGG | + | chr7_4:33957814-33957833 | Msa1150500:intron | 25.0% |
| !!! | AAACATGTCAGTTTTTTGTT+TGG | + | chr7_4:33957906-33957925 | Msa1150500:intron | 25.0% |
| !! | TTTACCTATGAATTAAGTTG+AGG | + | chr7_4:33958474-33958493 | Msa1150500:intron | 25.0% |
| ! | TTTACCTCAACTTAATTCAT+AGG | - | chr7_4:33958481-33958500 | None:intergenic | 25.0% |
| ! | AAGTCATAAATCAACTGTAA+AGG | - | chr7_4:33958796-33958815 | None:intergenic | 25.0% |
| ! | AGATCAATCATAACAAATCT+TGG | - | chr7_4:33959161-33959180 | None:intergenic | 25.0% |
| ! | CTATAATGACCAAAGATTAA+GGG | + | chr7_4:33959600-33959619 | Msa1150500:three_prime_UTR | 25.0% |
| !!! | GTTTTAGGCAATAAATTTAG+AGG | + | chr7_4:33959644-33959663 | Msa1150500:three_prime_UTR | 25.0% |
| ! | AGGTTAATTACCAAAATAGA+GGG | - | chr7_4:33959683-33959702 | None:intergenic | 25.0% |
| ! | AAGGTTAATTACCAAAATAG+AGG | - | chr7_4:33959684-33959703 | None:intergenic | 25.0% |
| CTATTTATATTTCGTGTGTG+TGG | - | chr7_4:33953890-33953909 | None:intergenic | 30.0% | |
| CAATTATTTGCTCCAGAAAA+TGG | + | chr7_4:33953955-33953974 | Msa1150500:intron | 30.0% | |
| CAAAATGAATGACACAATAG+TGG | - | chr7_4:33954059-33954078 | None:intergenic | 30.0% | |
| ! | GTAAAAGGGTATGTAGAAAA+TGG | - | chr7_4:33954137-33954156 | None:intergenic | 30.0% |
| CAAGAAAAAGGGTTTAATCA+AGG | - | chr7_4:33954291-33954310 | None:intergenic | 30.0% | |
| !! | GAAAAAGGGTATCAAGAAAA+AGG | - | chr7_4:33954303-33954322 | None:intergenic | 30.0% |
| AAATGTTAATGCATGCTTCT+GGG | - | chr7_4:33954420-33954439 | None:intergenic | 30.0% | |
| !!! | ATTGGTGATTTTTTTTTCCC+TGG | + | chr7_4:33954577-33954596 | Msa1150500:five_prime_UTR | 30.0% |
| !!! | TTGGTGATTTTTTTTTCCCT+GGG | + | chr7_4:33954578-33954597 | Msa1150500:five_prime_UTR | 30.0% |
| ! | GAATTTTTGTAGGAAAATGG+CGG | + | chr7_4:33954624-33954643 | Msa1150500:exon | 30.0% |
| ! | AATTTTTGTAGGAAAATGGC+GGG | + | chr7_4:33954625-33954644 | Msa1150500:exon | 30.0% |
| !! | GTTTTAGTAGTTTGAGTTTC+AGG | + | chr7_4:33954731-33954750 | Msa1150500:CDS | 30.0% |
| ! | GAAAATTTTGGATAGTGAGT+CGG | + | chr7_4:33954951-33954970 | Msa1150500:CDS | 30.0% |
| ! | AGTGTTGGAAATGATGATAA+TGG | + | chr7_4:33954982-33955001 | Msa1150500:CDS | 30.0% |
| TATCTAAGAAGAAGCAACTT+CGG | - | chr7_4:33955216-33955235 | None:intergenic | 30.0% | |
| GTTGCTTCTTCTTAGATATT+TGG | + | chr7_4:33955218-33955237 | Msa1150500:CDS | 30.0% | |
| TCTTAGATATTTGGATTTGG+AGG | + | chr7_4:33955227-33955246 | Msa1150500:CDS | 30.0% | |
| ! | GAATTTTCCAATAGCATACA+TGG | - | chr7_4:33955268-33955287 | None:intergenic | 30.0% |
| AAACAAGATGATCATTACCT+AGG | + | chr7_4:33955301-33955320 | Msa1150500:intron | 30.0% | |
| !! | CCAATTTTGAAAAGAAATGC+TGG | - | chr7_4:33955433-33955452 | None:intergenic | 30.0% |
| ! | CCAGCATTTCTTTTCAAAAT+TGG | + | chr7_4:33955430-33955449 | Msa1150500:CDS | 30.0% |
| TGGAAAACCATCAATATCTA+AGG | + | chr7_4:33955784-33955803 | Msa1150500:CDS | 30.0% | |
| GGAAAACCATCAATATCTAA+GGG | + | chr7_4:33955785-33955804 | Msa1150500:CDS | 30.0% | |
| TACTCGTCATGACATTAAAA+GGG | + | chr7_4:33955858-33955877 | Msa1150500:intron | 30.0% | |
| !!! | GACTTTCATGTCATTTTAGA+TGG | - | chr7_4:33955966-33955985 | None:intergenic | 30.0% |
| ! | TCTAAAATGACATGAAAGTC+AGG | + | chr7_4:33955966-33955985 | Msa1150500:intron | 30.0% |
| CTGAAGACAAAAAAGCAATT+AGG | - | chr7_4:33956002-33956021 | None:intergenic | 30.0% | |
| CAATGAGTGTTTCATTTGAA+TGG | + | chr7_4:33956189-33956208 | Msa1150500:intron | 30.0% | |
| AATGGACATTTCTATTTCCA+GGG | + | chr7_4:33956207-33956226 | Msa1150500:intron | 30.0% | |
| TGCAAACTATGTAATGACAA+CGG | - | chr7_4:33956328-33956347 | None:intergenic | 30.0% | |
| GTCAGATATATGATTGGAAA+GGG | - | chr7_4:33956398-33956417 | None:intergenic | 30.0% | |
| TGTCAGATATATGATTGGAA+AGG | - | chr7_4:33956399-33956418 | None:intergenic | 30.0% | |
| CTGATTGTCAGATATATGAT+TGG | - | chr7_4:33956404-33956423 | None:intergenic | 30.0% | |
| TCTAATACTCACTCTCTTAT+TGG | + | chr7_4:33956441-33956460 | Msa1150500:intron | 30.0% | |
| ATTATATTAGAAGATCCGCA+TGG | - | chr7_4:33956574-33956593 | None:intergenic | 30.0% | |
| !! | GTAGTTGTTATTTAGGAAGA+AGG | - | chr7_4:33956766-33956785 | None:intergenic | 30.0% |
| CAAATTAATGGCTTACTCTT+TGG | + | chr7_4:33956803-33956822 | Msa1150500:intron | 30.0% | |
| GAAAACTATATACTATTCGC+TGG | + | chr7_4:33956881-33956900 | Msa1150500:intron | 30.0% | |
| CTTCTATTGAATAAAATGGC+TGG | + | chr7_4:33957161-33957180 | Msa1150500:intron | 30.0% | |
| GAGTAATAAAACCTTATGCT+AGG | + | chr7_4:33957283-33957302 | Msa1150500:intron | 30.0% | |
| TAAAATCAATGGCTAGGATT+TGG | + | chr7_4:33957342-33957361 | Msa1150500:intron | 30.0% | |
| CATATAATGAAGTCACACTT+TGG | - | chr7_4:33957809-33957828 | None:intergenic | 30.0% | |
| ! | GCTTTTTGCTTGACATAAAT+AGG | + | chr7_4:33957836-33957855 | Msa1150500:intron | 30.0% |
| !!! | CAGTTTTTTGTTTGGAAACT+CGG | + | chr7_4:33957914-33957933 | Msa1150500:intron | 30.0% |
| AGTATCATTCAGTATGAACA+TGG | - | chr7_4:33958218-33958237 | None:intergenic | 30.0% | |
| !!! | AATAAATGGTTGCTGTTTTC+TGG | - | chr7_4:33958434-33958453 | None:intergenic | 30.0% |
| TTATGACTATCGACAAACAA+GGG | - | chr7_4:33958512-33958531 | None:intergenic | 30.0% | |
| ATTATGACTATCGACAAACA+AGG | - | chr7_4:33958513-33958532 | None:intergenic | 30.0% | |
| CTGTTCAATAAAATCAGTTC+TGG | - | chr7_4:33958657-33958676 | None:intergenic | 30.0% | |
| TGATTAGAGAGAAGGAAAAA+AGG | - | chr7_4:33958850-33958869 | None:intergenic | 30.0% | |
| ! | TTAAATGTAATCGAAAGTGC+CGG | - | chr7_4:33958931-33958950 | None:intergenic | 30.0% |
| CTAACAAGTTATGTGCAATA+TGG | + | chr7_4:33959131-33959150 | Msa1150500:intron | 30.0% | |
| GAACAAAATACATGTCAAGT+TGG | - | chr7_4:33959239-33959258 | None:intergenic | 30.0% | |
| ! | CGTTTTGCAAACAATGTTTA+TGG | + | chr7_4:33959417-33959436 | Msa1150500:CDS | 30.0% |
| TTTGCAAACAATGTTTATGG+TGG | + | chr7_4:33959420-33959439 | Msa1150500:CDS | 30.0% | |
| ! | TCTAGCCATAAATTTTCTTG+AGG | + | chr7_4:33959543-33959562 | Msa1150500:three_prime_UTR | 30.0% |
| TTCGACCTCAAGAAAATTTA+TGG | - | chr7_4:33959551-33959570 | None:intergenic | 30.0% | |
| CCTTAATCTTTGGTCATTAT+AGG | - | chr7_4:33959602-33959621 | None:intergenic | 30.0% | |
| CCTATAATGACCAAAGATTA+AGG | + | chr7_4:33959599-33959618 | Msa1150500:three_prime_UTR | 30.0% | |
| !!! | GATTGGTTTAGAAAGGTTTT+AGG | + | chr7_4:33959629-33959648 | Msa1150500:three_prime_UTR | 30.0% |
| AACAGTAGACTTCATCATTA+AGG | - | chr7_4:33959703-33959722 | None:intergenic | 30.0% | |
| TAATAGGGAAATGCTAACAC+TGG | + | chr7_4:33953684-33953703 | Msa1150500:intron | 35.0% | |
| CTGGTTAAGGATGCTAAAAA+CGG | + | chr7_4:33953703-33953722 | Msa1150500:intron | 35.0% | |
| ! | ATAATGAAGTATGAGGGTAC+TGG | - | chr7_4:33953831-33953850 | None:intergenic | 35.0% |
| CAAATAATTGACACCTAGCA+TGG | - | chr7_4:33953945-33953964 | None:intergenic | 35.0% | |
| !!! | GGAAAATTCATGCCATTTTC+TGG | - | chr7_4:33953970-33953989 | None:intergenic | 35.0% |
| TGAGTGTACCTAAGCAATTT+GGG | - | chr7_4:33954014-33954033 | None:intergenic | 35.0% | |
| AAATGAAAGTAAAACAGCCC+AGG | - | chr7_4:33954348-33954367 | None:intergenic | 35.0% | |
| CAAATGTTAATGCATGCTTC+TGG | - | chr7_4:33954421-33954440 | None:intergenic | 35.0% | |
| ! | ATTCCTTGTCTTTTGCAGAT+TGG | + | chr7_4:33954475-33954494 | Msa1150500:intron | 35.0% |
| AATCCAATCTGCAAAAGACA+AGG | - | chr7_4:33954481-33954500 | None:intergenic | 35.0% | |
| ! | TCTTTTGCAGATTGGATTTG+AGG | + | chr7_4:33954483-33954502 | Msa1150500:intron | 35.0% |
| !! | ATTTGAGGTGTGATCTGTTT+TGG | + | chr7_4:33954498-33954517 | Msa1150500:five_prime_UTR | 35.0% |
| GTTTCTTTGTATTGTTGAGC+TGG | + | chr7_4:33954520-33954539 | Msa1150500:five_prime_UTR | 35.0% | |
| !!! | TGGTGATTTTTTTTTCCCTG+GGG | + | chr7_4:33954579-33954598 | Msa1150500:five_prime_UTR | 35.0% |
| AATTCTATCGTACTTACAGC+AGG | - | chr7_4:33954892-33954911 | None:intergenic | 35.0% | |
| AGTACGATAGAATTATCGGA+AGG | + | chr7_4:33954898-33954917 | Msa1150500:CDS | 35.0% | |
| GTACGATAGAATTATCGGAA+GGG | + | chr7_4:33954899-33954918 | Msa1150500:CDS | 35.0% | |
| TACGATAGAATTATCGGAAG+GGG | + | chr7_4:33954900-33954919 | Msa1150500:CDS | 35.0% | |
| ! | GGGAAAGGAACAGAAAATTT+TGG | + | chr7_4:33954939-33954958 | Msa1150500:CDS | 35.0% |
| ATCATCATTTCCAACACTCT+TGG | - | chr7_4:33954980-33954999 | None:intergenic | 35.0% | |
| !! | GATAATGGTGTTGTGTTTGA+TGG | + | chr7_4:33954997-33955016 | Msa1150500:CDS | 35.0% |
| ! | TACCCTTCCTTTTGATATGT+TGG | + | chr7_4:33955167-33955186 | Msa1150500:CDS | 35.0% |
| CTCCAACATATCAAAAGGAA+GGG | - | chr7_4:33955172-33955191 | None:intergenic | 35.0% | |
| ATCTAAGAAGAAGCAACTTC+GGG | - | chr7_4:33955215-33955234 | None:intergenic | 35.0% | |
| AACAACAACGTTAAACTCCT+AGG | - | chr7_4:33955321-33955340 | None:intergenic | 35.0% | |
| AAGCATAGAACATGATCTCA+TGG | - | chr7_4:33955389-33955408 | None:intergenic | 35.0% | |
| !! | TCTTTTCAAAATTGGCTCAG+AGG | + | chr7_4:33955438-33955457 | Msa1150500:CDS | 35.0% |
| ! | AGAGCACTTAGTCAAAGAAT+TGG | - | chr7_4:33955545-33955564 | None:intergenic | 35.0% |
| CGGATTACTTAAGATAGAGA+AGG | - | chr7_4:33955592-33955611 | None:intergenic | 35.0% | |
| CTGCGTATCATGAGTTAAAT+CGG | - | chr7_4:33955612-33955631 | None:intergenic | 35.0% | |
| ! | CTTTTGATATTCAGCAACAG+TGG | - | chr7_4:33955657-33955676 | None:intergenic | 35.0% |
| GTTGCTGAATATCAAAAGAG+AGG | + | chr7_4:33955659-33955678 | Msa1150500:CDS | 35.0% | |
| ! | AAAAGAGAGGCAAAGACTTT+TGG | + | chr7_4:33955672-33955691 | Msa1150500:CDS | 35.0% |
| TATGTTGCAGATCTTCTTGT+TGG | + | chr7_4:33955710-33955729 | Msa1150500:CDS | 35.0% | |
| ATGTTGCAGATCTTCTTGTT+GGG | + | chr7_4:33955711-33955730 | Msa1150500:CDS | 35.0% | |
| !! | GTTGTTAATGTTGCTTTGGT+TGG | + | chr7_4:33955737-33955756 | Msa1150500:CDS | 35.0% |
| AGGAATCCCTTAGATATTGA+TGG | - | chr7_4:33955794-33955813 | None:intergenic | 35.0% | |
| TCAATATCTAAGGGATTCCT+TGG | + | chr7_4:33955794-33955813 | Msa1150500:CDS | 35.0% | |
| AAGCTTTCTGCATATTACCA+AGG | - | chr7_4:33955814-33955833 | None:intergenic | 35.0% | |
| CTACTCGTCATGACATTAAA+AGG | + | chr7_4:33955857-33955876 | Msa1150500:intron | 35.0% | |
| !!! | CATTAAAAGGGCCTTGTTTT+TGG | + | chr7_4:33955870-33955889 | Msa1150500:intron | 35.0% |
| ACTTGGAACATACTTCTTCA+AGG | + | chr7_4:33956118-33956137 | Msa1150500:CDS | 35.0% | |
| GAATGGACATTTCTATTTCC+AGG | + | chr7_4:33956206-33956225 | Msa1150500:intron | 35.0% | |
| GGATTTGGATGTGGTATTAT+AGG | + | chr7_4:33956249-33956268 | Msa1150500:CDS | 35.0% | |
| TTATCATGTTTGCAATGCCT+TGG | - | chr7_4:33956275-33956294 | None:intergenic | 35.0% | |
| ! | ACATGATAATGACTGCAAAG+CGG | + | chr7_4:33956286-33956305 | Msa1150500:CDS | 35.0% |
| ATCTGACAATCAGAAATGCT+AGG | + | chr7_4:33956411-33956430 | Msa1150500:intron | 35.0% | |
| TCAATGTGTGTTGAACAGTT+TGG | + | chr7_4:33956469-33956488 | Msa1150500:intron | 35.0% | |
| ATACTTACTCTTGGAGTCAA+TGG | - | chr7_4:33957376-33957395 | None:intergenic | 35.0% | |
| TCACTAGTAATGACTAGCAT+AGG | + | chr7_4:33956729-33956748 | Msa1150500:intron | 35.0% | |
| CACTAGTAATGACTAGCATA+GGG | + | chr7_4:33956730-33956749 | Msa1150500:intron | 35.0% | |
| ATACTTACTCTTGGAGTCAA+TGG | + | chr7_4:33957376-33957395 | Msa1150500:intron | 35.0% | |
| GACTATTTGAGCTTATCTAC+CGG | + | chr7_4:33957562-33957581 | Msa1150500:intron | 35.0% | |
| ! | CATATTTTCGTAAGCTCTCT+TGG | + | chr7_4:33957662-33957681 | Msa1150500:intron | 35.0% |
| GCTTGACATAAATAGGTTCT+AGG | + | chr7_4:33957843-33957862 | Msa1150500:intron | 35.0% | |
| ! | TCTAGGAGCAGATTTTAAAC+AGG | + | chr7_4:33957860-33957879 | Msa1150500:intron | 35.0% |
| ! | ACTTTGCTATGGCTTCAATT+GGG | - | chr7_4:33958001-33958020 | None:intergenic | 35.0% |
| GTGACAACAATTCTTGTGTT+GGG | - | chr7_4:33958038-33958057 | None:intergenic | 35.0% | |
| ACTGTGTAGTTCAATTAGAG+TGG | + | chr7_4:33958743-33958762 | Msa1150500:intron | 35.0% | |
| CAACACTAACACATAAACAC+CGG | - | chr7_4:33958979-33958998 | None:intergenic | 35.0% | |
| GAAGCATAAATTTCTACCTC+AGG | + | chr7_4:33959568-33959587 | Msa1150500:three_prime_UTR | 35.0% | |
| AAATTTCTACCTCAGGTTCA+TGG | + | chr7_4:33959575-33959594 | Msa1150500:three_prime_UTR | 35.0% | |
| ! | AGCATTTGTTCCCTCTATTT+TGG | + | chr7_4:33959670-33959689 | Msa1150500:three_prime_UTR | 35.0% |
| ! | GGAAATGCTAACACTGGTTA+AGG | + | chr7_4:33953690-33953709 | Msa1150500:intron | 40.0% |
| !! | AAGTATGAGGGTACTGGTTA+AGG | - | chr7_4:33953825-33953844 | None:intergenic | 40.0% |
| GTGAGTGTACCTAAGCAATT+TGG | - | chr7_4:33954015-33954034 | None:intergenic | 40.0% | |
| AATGACACAATAGTGGCAGT+GGG | - | chr7_4:33954052-33954071 | None:intergenic | 40.0% | |
| ! | CGGGTTGTTCATCGAATTTT+GGG | + | chr7_4:33954644-33954663 | Msa1150500:CDS | 40.0% |
| ! | GGGTTGTTCATCGAATTTTG+GGG | + | chr7_4:33954645-33954664 | Msa1150500:CDS | 40.0% |
| !! | TTGTTCATCGAATTTTGGGG+TGG | + | chr7_4:33954648-33954667 | Msa1150500:CDS | 40.0% |
| CACTTGTTCACACAAATTGC+TGG | - | chr7_4:33954787-33954806 | None:intergenic | 40.0% | |
| GCAATTTGTGTGAACAAGTG+CGG | + | chr7_4:33954787-33954806 | Msa1150500:CDS | 40.0% | |
| ACGATAGAATTATCGGAAGG+GGG | + | chr7_4:33954901-33954920 | Msa1150500:CDS | 40.0% | |
| ! | AAGTGATAGTGTTGTGGGAA+AGG | + | chr7_4:33954924-33954943 | Msa1150500:CDS | 40.0% |
| !! | TTTGATGGTAGTGGTGGTAA+TGG | + | chr7_4:33955012-33955031 | Msa1150500:CDS | 40.0% |
| ! | TGATGATGACGACAAAGATG+AGG | + | chr7_4:33955083-33955102 | Msa1150500:CDS | 40.0% |
| ! | GATGATGACGACAAAGATGA+GGG | + | chr7_4:33955084-33955103 | Msa1150500:CDS | 40.0% |
| ! | ATGATGACGACAAAGATGAG+GGG | + | chr7_4:33955085-33955104 | Msa1150500:CDS | 40.0% |
| ACAAAGATGAGGGGGAATTT+GGG | + | chr7_4:33955094-33955113 | Msa1150500:CDS | 40.0% | |
| !!! | ACCTCGTCGTATTTTAGCAT+TGG | - | chr7_4:33955120-33955139 | None:intergenic | 40.0% |
| CCTCCAACATATCAAAAGGA+AGG | - | chr7_4:33955173-33955192 | None:intergenic | 40.0% | |
| ! | CCTTCCTTTTGATATGTTGG+AGG | + | chr7_4:33955170-33955189 | Msa1150500:CDS | 40.0% |
| GAGATGTCCATGTATGCTAT+TGG | + | chr7_4:33955258-33955277 | Msa1150500:intron | 40.0% | |
| ! | CTCAATTGCAGGGATCTTTT+TGG | + | chr7_4:33955350-33955369 | Msa1150500:intron | 40.0% |
| GATCTCATGGCAAATCCTAA+AGG | - | chr7_4:33955376-33955395 | None:intergenic | 40.0% | |
| ! | GACGGTTGTTAATGTTGCTT+TGG | + | chr7_4:33955733-33955752 | Msa1150500:CDS | 40.0% |
| !! | TGTTGCTTTGGTTGGAATGT+TGG | + | chr7_4:33955745-33955764 | Msa1150500:CDS | 40.0% |
| ! | GGTTTTCCAATTCGAGCATA+AGG | - | chr7_4:33955773-33955792 | None:intergenic | 40.0% |
| ! | GCAGTGTATTTGAAGCTGAA+AGG | + | chr7_4:33956066-33956085 | Msa1150500:intron | 40.0% |
| TGCACAGAAAATCTACATCC+TGG | - | chr7_4:33956092-33956111 | None:intergenic | 40.0% | |
| TTGGTCAACGCAATTATGAG+AGG | + | chr7_4:33956163-33956182 | Msa1150500:intron | 40.0% | |
| TTCCAGGGTATAATGTATGC+AGG | + | chr7_4:33956222-33956241 | Msa1150500:intron | 40.0% | |
| GGTATAATGTATGCAGGTGT+TGG | + | chr7_4:33956228-33956247 | Msa1150500:CDS | 40.0% | |
| !! | ATGTATGCAGGTGTTGGATT+TGG | + | chr7_4:33956234-33956253 | Msa1150500:CDS | 40.0% |
| ATAATGACTGCAAAGCGGTA+TGG | + | chr7_4:33956291-33956310 | Msa1150500:intron | 40.0% | |
| TTTGGAAATGAGTCTCCACA+TGG | + | chr7_4:33956487-33956506 | Msa1150500:intron | 40.0% | |
| TTGGAAATGAGTCTCCACAT+GGG | + | chr7_4:33956488-33956507 | Msa1150500:intron | 40.0% | |
| CCAATAGGATTAAACCCATG+TGG | - | chr7_4:33956505-33956524 | None:intergenic | 40.0% | |
| CCACATGGGTTTAATCCTAT+TGG | + | chr7_4:33956502-33956521 | Msa1150500:intron | 40.0% | |
| GTTTAATCCTATTGGAGAGC+AGG | + | chr7_4:33956510-33956529 | Msa1150500:intron | 40.0% | |
| TTTAACACCTGCTCTCCAAT+AGG | - | chr7_4:33956520-33956539 | None:intergenic | 40.0% | |
| ! | GATTGTTTTCACGTGTAGTC+AGG | + | chr7_4:33957244-33957263 | Msa1150500:intron | 40.0% |
| AACCTTATGCTAGGGATTAG+TGG | + | chr7_4:33957292-33957311 | Msa1150500:intron | 40.0% | |
| TAAGCACTTGTGAGACTCTT+TGG | + | chr7_4:33957587-33957606 | Msa1150500:intron | 40.0% | |
| AAGCACTTGTGAGACTCTTT+GGG | + | chr7_4:33957588-33957607 | Msa1150500:intron | 40.0% | |
| !! | AGTCACACTTTGGCTCTATT+TGG | - | chr7_4:33957799-33957818 | None:intergenic | 40.0% |
| TTGTTTGGAAACTCGGTATC+TGG | + | chr7_4:33957921-33957940 | Msa1150500:intron | 40.0% | |
| ! | GACTTTGCTATGGCTTCAAT+TGG | - | chr7_4:33958002-33958021 | None:intergenic | 40.0% |
| GGTGACAACAATTCTTGTGT+TGG | - | chr7_4:33958039-33958058 | None:intergenic | 40.0% | |
| ACACAAGAATTGTTGTCACC+TGG | + | chr7_4:33958039-33958058 | Msa1150500:intron | 40.0% | |
| CACAAGAATTGTTGTCACCT+GGG | + | chr7_4:33958040-33958059 | Msa1150500:intron | 40.0% | |
| ACAAGAATTGTTGTCACCTG+GGG | + | chr7_4:33958041-33958060 | Msa1150500:intron | 40.0% | |
| ! | GAAATTTTTAACAACCCCCC+AGG | - | chr7_4:33958161-33958180 | None:intergenic | 40.0% |
| CTCTGATGTCTTTATGTTCC+TGG | - | chr7_4:33958307-33958326 | None:intergenic | 40.0% | |
| CAGGAACATAAAGACATCAG+AGG | + | chr7_4:33958305-33958324 | Msa1150500:intron | 40.0% | |
| !!! | TTTTGAAGAGTGCTGCTCTT+TGG | + | chr7_4:33958349-33958368 | Msa1150500:CDS | 40.0% |
| !! | TTTGAAGAGTGCTGCTCTTT+GGG | + | chr7_4:33958350-33958369 | Msa1150500:CDS | 40.0% |
| GTGTAGTTCAATTAGAGTGG+TGG | + | chr7_4:33958746-33958765 | Msa1150500:intron | 40.0% | |
| AGTTCAATTAGAGTGGTGGT+TGG | + | chr7_4:33958750-33958769 | Msa1150500:intron | 40.0% | |
| GAGAGAAGGAAAAAAGGAAG+AGG | - | chr7_4:33958844-33958863 | None:intergenic | 40.0% | |
| ! | CTGAAGTGCTAGTACTACAT+TGG | - | chr7_4:33958882-33958901 | None:intergenic | 40.0% |
| TAGTGTTGTGTCCATATCAC+CGG | + | chr7_4:33958991-33959010 | Msa1150500:intron | 40.0% | |
| ACACATAAACACCGGTGATA+TGG | - | chr7_4:33959005-33959024 | None:intergenic | 40.0% | |
| !! | TTGTTTTGTGCTACGAAGCA+CGG | - | chr7_4:33959058-33959077 | None:intergenic | 40.0% |
| ATTATAGGTCCATGAACCTG+AGG | - | chr7_4:33959587-33959606 | None:intergenic | 40.0% | |
| ATCCATGCACCCTTAATCTT+TGG | - | chr7_4:33959612-33959631 | None:intergenic | 40.0% | |
| ! | AAGATTAAGGGTGCATGGAT+TGG | + | chr7_4:33959612-33959631 | Msa1150500:three_prime_UTR | 40.0% |
| !! | GTGCATGGATTGGTTTAGAA+AGG | + | chr7_4:33959622-33959641 | Msa1150500:three_prime_UTR | 40.0% |
| CTATTGTGTTGTGCCATGCT+AGG | + | chr7_4:33953929-33953948 | Msa1150500:intron | 45.0% | |
| ATGACACAATAGTGGCAGTG+GGG | - | chr7_4:33954051-33954070 | None:intergenic | 45.0% | |
| GAATGACACAATAGTGGCAG+TGG | - | chr7_4:33954053-33954072 | None:intergenic | 45.0% | |
| !! | TTTTCCCTGGGGTAGTTTTG+TGG | + | chr7_4:33954590-33954609 | Msa1150500:five_prime_UTR | 45.0% |
| TCTACCACAAAACTACCCCA+GGG | - | chr7_4:33954597-33954616 | None:intergenic | 45.0% | |
| TTCTACCACAAAACTACCCC+AGG | - | chr7_4:33954598-33954617 | None:intergenic | 45.0% | |
| !! | GCGGGTTGTTCATCGAATTT+TGG | + | chr7_4:33954643-33954662 | Msa1150500:CDS | 45.0% |
| GAGTGCGATGTTGTTGAATG+AGG | + | chr7_4:33954753-33954772 | Msa1150500:CDS | 45.0% | |
| ATTTGTGTGAACAAGTGCGG+TGG | + | chr7_4:33954790-33954809 | Msa1150500:CDS | 45.0% | |
| ! | GGTGTTGTGTTTGATGGTAG+TGG | + | chr7_4:33955003-33955022 | Msa1150500:CDS | 45.0% |
| !! | GTTGTGTTTGATGGTAGTGG+TGG | + | chr7_4:33955006-33955025 | Msa1150500:CDS | 45.0% |
| !! | AGTGGTGGTAATGGAAGCTT+TGG | + | chr7_4:33955021-33955040 | Msa1150500:CDS | 45.0% |
| !! | GGTAATGGAAGCTTTGGAAG+TGG | + | chr7_4:33955027-33955046 | Msa1150500:CDS | 45.0% |
| !! | AATGGAAGCTTTGGAAGTGG+CGG | + | chr7_4:33955030-33955049 | Msa1150500:CDS | 45.0% |
| ! | TGATGACGACAAAGATGAGG+GGG | + | chr7_4:33955086-33955105 | Msa1150500:CDS | 45.0% |
| GACAAAGATGAGGGGGAATT+TGG | + | chr7_4:33955093-33955112 | Msa1150500:CDS | 45.0% | |
| GCCAATGCTAAAATACGACG+AGG | + | chr7_4:33955116-33955135 | Msa1150500:CDS | 45.0% | |
| GCAGCCTCCAACATATCAAA+AGG | - | chr7_4:33955177-33955196 | None:intergenic | 45.0% | |
| !! | CAGGGATCTTTTTGGCCTTT+AGG | + | chr7_4:33955358-33955377 | Msa1150500:intron | 45.0% |
| TATGCTTCGCAATCGAATGC+TGG | + | chr7_4:33955402-33955421 | Msa1150500:CDS | 45.0% | |
| TGCAGATCTTCTTGTTGGGA+CGG | + | chr7_4:33955715-33955734 | Msa1150500:CDS | 45.0% | |
| TTGGCACCTTATGCTCGAAT+TGG | + | chr7_4:33955764-33955783 | Msa1150500:CDS | 45.0% | |
| CTTATGCAGCTTTACCTAGC+AGG | + | chr7_4:33955831-33955850 | Msa1150500:CDS | 45.0% | |
| ATGACGAGTAGTAACCTGCT+AGG | - | chr7_4:33955848-33955867 | None:intergenic | 45.0% | |
| ! | GTATTTGAAGCTGAAAGGCC+AGG | + | chr7_4:33956071-33956090 | Msa1150500:CDS | 45.0% |
| ! | TTTTCTGTGCAGCAGAGACT+TGG | + | chr7_4:33956101-33956120 | Msa1150500:CDS | 45.0% |
| CACCTGCATACATTATACCC+TGG | - | chr7_4:33956227-33956246 | None:intergenic | 45.0% | |
| GGATGTGGTATTATAGGCCA+AGG | + | chr7_4:33956255-33956274 | Msa1150500:CDS | 45.0% | |
| ! | CAATGCAGAGTGTCTGAACA+TGG | - | chr7_4:33956373-33956392 | None:intergenic | 45.0% |
| ATGGCCAATTGTCAGATGAG+GGG | - | chr7_4:33956555-33956574 | None:intergenic | 45.0% | |
| CATGGCCAATTGTCAGATGA+GGG | - | chr7_4:33956556-33956575 | None:intergenic | 45.0% | |
| TCATCTGACAATTGGCCATG+CGG | + | chr7_4:33956556-33956575 | Msa1150500:intron | 45.0% | |
| ! | TGTTTTCACGTGTAGTCAGG+TGG | + | chr7_4:33957247-33957266 | Msa1150500:intron | 45.0% |
| ! | GTTTTCACGTGTAGTCAGGT+GGG | + | chr7_4:33957248-33957267 | Msa1150500:intron | 45.0% |
| !! | TGTAGTCAGGTGGGTTGTTT+AGG | + | chr7_4:33957257-33957276 | Msa1150500:intron | 45.0% |
| CACCACTAATCCCTAGCATA+AGG | - | chr7_4:33957297-33957316 | None:intergenic | 45.0% | |
| AGTCTCACAAGTGCTTATGC+CGG | - | chr7_4:33957584-33957603 | None:intergenic | 45.0% | |
| !! | AGACTCTTTGGGAGAGCTTT+TGG | + | chr7_4:33957599-33957618 | Msa1150500:intron | 45.0% |
| ! | GATTGGTCCCCAAGATTAGA+CGG | - | chr7_4:33957955-33957974 | None:intergenic | 45.0% |
| CAATCCTACTGTCCAGTAGA+GGG | + | chr7_4:33957970-33957989 | Msa1150500:intron | 45.0% | |
| AATCCTACTGTCCAGTAGAG+GGG | + | chr7_4:33957971-33957990 | Msa1150500:intron | 45.0% | |
| AGCCATAGCAAAGTCCTGTA+TGG | + | chr7_4:33958007-33958026 | Msa1150500:intron | 45.0% | |
| GTCCATACAGGACTTTGCTA+TGG | - | chr7_4:33958012-33958031 | None:intergenic | 45.0% | |
| CAAGAATTGTTGTCACCTGG+GGG | + | chr7_4:33958042-33958061 | Msa1150500:intron | 45.0% | |
| GGGATTCGAACATGAGATCT+GGG | + | chr7_4:33958062-33958081 | Msa1150500:intron | 45.0% | |
| GGATTCGAACATGAGATCTG+GGG | + | chr7_4:33958063-33958082 | Msa1150500:intron | 45.0% | |
| TTCGAACATGAGACCTAGAG+AGG | + | chr7_4:33958087-33958106 | Msa1150500:intron | 45.0% | |
| ! | TTTTAACAACCCCCCAGGAT+TGG | - | chr7_4:33958156-33958175 | None:intergenic | 45.0% |
| TGTTCCTGGTAGCAAAGAAG+AGG | - | chr7_4:33958293-33958312 | None:intergenic | 45.0% | |
| CTCTTCAAAAGAGGTGGTAC+AGG | - | chr7_4:33958339-33958358 | None:intergenic | 45.0% | |
| AGAGCAGCACTCTTCAAAAG+AGG | - | chr7_4:33958348-33958367 | None:intergenic | 45.0% | |
| !! | TTGAAGAGTGCTGCTCTTTG+GGG | + | chr7_4:33958351-33958370 | Msa1150500:CDS | 45.0% |
| GCTAGTACTACATTGGTCGT+CGG | - | chr7_4:33958875-33958894 | None:intergenic | 45.0% | |
| GTGCTTCGTAGCACAAAACA+AGG | + | chr7_4:33959057-33959076 | Msa1150500:intron | 45.0% | |
| AACACACCTGCATGGATGTT+CGG | - | chr7_4:33959279-33959298 | None:intergenic | 45.0% | |
| ATCTTCAAACACGCGATACC+AGG | + | chr7_4:33959308-33959327 | Msa1150500:CDS | 45.0% | |
| ATACCAGGTCATCAATGGAC+TGG | + | chr7_4:33959323-33959342 | Msa1150500:CDS | 45.0% | |
| !! | CATCAATGGACTGGAACGTT+TGG | + | chr7_4:33959332-33959351 | Msa1150500:CDS | 45.0% |
| !! | TTTGGTAGAAGCATCGCCAA+TGG | + | chr7_4:33959350-33959369 | Msa1150500:CDS | 45.0% |
| !! | TGGCATGCAGTTTGTTGACT+GGG | + | chr7_4:33959440-33959459 | Msa1150500:CDS | 45.0% |
| ! | GACCAAAGATTAAGGGTGCA+TGG | + | chr7_4:33959607-33959626 | Msa1150500:three_prime_UTR | 45.0% |
| !! | ATATATATATATATATATAG+AGG | + | chr7_4:33956619-33956638 | Msa1150500:intron | 5.0% |
| !! | TATATATATATATATATATG+AGG | - | chr7_4:33957408-33957427 | None:intergenic | 5.0% |
| ! | GTGGCTCGAGTTGTAAGTGT+CGG | + | chr7_4:33954667-33954686 | Msa1150500:CDS | 50.0% |
| ! | TGGCTCGAGTTGTAAGTGTC+GGG | + | chr7_4:33954668-33954687 | Msa1150500:CDS | 50.0% |
| !! | GTAAGTGTCGGGAAAGAAGC+TGG | + | chr7_4:33954679-33954698 | Msa1150500:CDS | 50.0% |
| TGTCGGGAAAGAAGCTGGTT+TGG | + | chr7_4:33954684-33954703 | Msa1150500:CDS | 50.0% | |
| ! | GTCGGGAAAGAAGCTGGTTT+GGG | + | chr7_4:33954685-33954704 | Msa1150500:CDS | 50.0% |
| !! | TCGGGAAAGAAGCTGGTTTG+GGG | + | chr7_4:33954686-33954705 | Msa1150500:CDS | 50.0% |
| ! | AGGGGGAAGTGATAGTGTTG+TGG | + | chr7_4:33954918-33954937 | Msa1150500:CDS | 50.0% |
| ! | GGGGGAAGTGATAGTGTTGT+GGG | + | chr7_4:33954919-33954938 | Msa1150500:CDS | 50.0% |
| ! | GAGTCGGATTCCAAGAGTGT+TGG | + | chr7_4:33954967-33954986 | Msa1150500:CDS | 50.0% |
| !! | CGAGGTATTGAGAGAGACAG+AGG | + | chr7_4:33955134-33955153 | Msa1150500:CDS | 50.0% |
| TTGGAGGCTGCTAAGACTGT+GGG | + | chr7_4:33955186-33955205 | Msa1150500:CDS | 50.0% | |
| !! | GCAGGTGTTGGATTTGGATG+TGG | + | chr7_4:33956240-33956259 | Msa1150500:CDS | 50.0% |
| !! | ATTGTCAGATGAGGGGTGCT+AGG | - | chr7_4:33956548-33956567 | None:intergenic | 50.0% |
| AGCACCCCTCATCTGACAAT+TGG | + | chr7_4:33956548-33956567 | Msa1150500:intron | 50.0% | |
| GCATGGCCAATTGTCAGATG+AGG | - | chr7_4:33956557-33956576 | None:intergenic | 50.0% | |
| TGCAATCGTGAACTCTCTGC+AGG | - | chr7_4:33957106-33957125 | None:intergenic | 50.0% | |
| !! | GTCAGGTGGGTTGTTTAGGA+AGG | + | chr7_4:33957261-33957280 | Msa1150500:intron | 50.0% |
| AAACTCGGTATCTGGCCCAA+TGG | + | chr7_4:33957929-33957948 | Msa1150500:intron | 50.0% | |
| CCCAAGATTAGACGGCCATT+GGG | - | chr7_4:33957947-33957966 | None:intergenic | 50.0% | |
| CCCAATGGCCGTCTAATCTT+GGG | + | chr7_4:33957944-33957963 | Msa1150500:intron | 50.0% | |
| CCAATGGCCGTCTAATCTTG+GGG | + | chr7_4:33957945-33957964 | Msa1150500:intron | 50.0% | |
| CCTCTACTGGACAGTAGGAT+TGG | - | chr7_4:33957972-33957991 | None:intergenic | 50.0% | |
| CCAATCCTACTGTCCAGTAG+AGG | + | chr7_4:33957969-33957988 | Msa1150500:intron | 50.0% | |
| ATCCTACTGTCCAGTAGAGG+GGG | + | chr7_4:33957972-33957991 | Msa1150500:intron | 50.0% | |
| !! | TGTGTTGGGCTAGTCCATAC+AGG | - | chr7_4:33958024-33958043 | None:intergenic | 50.0% |
| ATCTCATGTTCGAATCCCCC+AGG | - | chr7_4:33958060-33958079 | None:intergenic | 50.0% | |
| GGGGATTCGAACATGAGATC+TGG | + | chr7_4:33958061-33958080 | Msa1150500:intron | 50.0% | |
| TTCACCAACAGGCCAATCCT+GGG | + | chr7_4:33958141-33958160 | Msa1150500:intron | 50.0% | |
| CTCACCTCTTCTTTGCTACC+AGG | + | chr7_4:33958286-33958305 | Msa1150500:intron | 50.0% | |
| GCAGCACTCTTCAAAAGAGG+TGG | - | chr7_4:33958345-33958364 | None:intergenic | 50.0% | |
| CGTCGGAGTGATTAGAGAGA+AGG | - | chr7_4:33958858-33958877 | None:intergenic | 50.0% | |
| !! | AAAGTGCCGGTGTTGGACAT+CGG | - | chr7_4:33958918-33958937 | None:intergenic | 50.0% |
| !! | GTAATCGAAAGTGCCGGTGT+TGG | - | chr7_4:33958925-33958944 | None:intergenic | 50.0% |
| TGTTTCCCGAACATCCATGC+AGG | + | chr7_4:33959270-33959289 | Msa1150500:intron | 50.0% | |
| ACACACCTGCATGGATGTTC+GGG | - | chr7_4:33959278-33959297 | None:intergenic | 50.0% | |
| ATCCATGCAGGTGTGTTCCT+TGG | + | chr7_4:33959282-33959301 | Msa1150500:intron | 50.0% | |
| TCCATGCAGGTGTGTTCCTT+GGG | + | chr7_4:33959283-33959302 | Msa1150500:intron | 50.0% | |
| GCGTGTTTGAAGATACCCCA+AGG | - | chr7_4:33959302-33959321 | None:intergenic | 50.0% | |
| ACGCGATACCAGGTCATCAA+TGG | + | chr7_4:33959318-33959337 | Msa1150500:CDS | 50.0% | |
| ! | GTTCCAGTCCATTGATGACC+TGG | - | chr7_4:33959329-33959348 | None:intergenic | 50.0% |
| ACTGTGAAAGCCAGAGCAAC+TGG | - | chr7_4:33959390-33959409 | None:intergenic | 50.0% | |
| !! | GTTGCTCTGGCTTTCACAGT+TGG | + | chr7_4:33959390-33959409 | Msa1150500:CDS | 50.0% |
| !! | GTGGCATGCAGTTTGTTGAC+TGG | + | chr7_4:33959439-33959458 | Msa1150500:CDS | 50.0% |
| !! | TGCAGTTTGTTGACTGGGCT+AGG | + | chr7_4:33959445-33959464 | Msa1150500:CDS | 50.0% |
| !! | AGTTTGTTGACTGGGCTAGG+TGG | + | chr7_4:33959448-33959467 | Msa1150500:CDS | 50.0% |
| TAGTGGCAGTGGGGAAGATG+CGG | - | chr7_4:33954042-33954061 | None:intergenic | 55.0% | |
| TGTGTGAACAAGTGCGGTGG+TGG | + | chr7_4:33954793-33954812 | Msa1150500:CDS | 55.0% | |
| ACAGCAGGCTGTGAATCAGC+CGG | - | chr7_4:33954877-33954896 | None:intergenic | 55.0% | |
| ! | TTGAGAGAGACAGAGGCACG+CGG | + | chr7_4:33955141-33955160 | Msa1150500:CDS | 55.0% |
| GTTGGAGGCTGCTAAGACTG+TGG | + | chr7_4:33955185-33955204 | Msa1150500:CDS | 55.0% | |
| GCCCAATGGCCGTCTAATCT+TGG | + | chr7_4:33957943-33957962 | Msa1150500:intron | 55.0% | |
| CCCCAAGATTAGACGGCCAT+TGG | - | chr7_4:33957948-33957967 | None:intergenic | 55.0% | |
| TCCTACTGTCCAGTAGAGGG+GGG | + | chr7_4:33957973-33957992 | Msa1150500:intron | 55.0% | |
| TAGAGAGGAGCAGACTCCCA+GGG | + | chr7_4:33958102-33958121 | Msa1150500:intron | 55.0% | |
| ! | TGGCCTGTTGGTGAAGGCTT+GGG | - | chr7_4:33958136-33958155 | None:intergenic | 55.0% |
| ! | TTGGCCTGTTGGTGAAGGCT+TGG | - | chr7_4:33958137-33958156 | None:intergenic | 55.0% |
| !! | CAGGATTGGCCTGTTGGTGA+AGG | - | chr7_4:33958142-33958161 | None:intergenic | 55.0% |
| CTTCACCAACAGGCCAATCC+TGG | + | chr7_4:33958140-33958159 | Msa1150500:intron | 55.0% | |
| TCACCAACAGGCCAATCCTG+GGG | + | chr7_4:33958142-33958161 | Msa1150500:intron | 55.0% | |
| GTGTGTCCGATGTCCAACAC+CGG | + | chr7_4:33958909-33958928 | Msa1150500:intron | 55.0% | |
| ACGGACACATACGCGGATTC+TGG | - | chr7_4:33959039-33959058 | None:intergenic | 55.0% | |
| ACGAAGCACGGACACATACG+CGG | - | chr7_4:33959046-33959065 | None:intergenic | 55.0% | |
| CCATGCAGGTGTGTTCCTTG+GGG | + | chr7_4:33959284-33959303 | Msa1150500:intron | 55.0% | |
| AGCATCGCCAATGGCAAAGC+AGG | + | chr7_4:33959359-33959378 | Msa1150500:CDS | 55.0% | |
| GGTGGAACCTGCTTTGCCAT+TGG | - | chr7_4:33959369-33959388 | None:intergenic | 55.0% | |
| GTGAAAGCCAGAGCAACTGG+TGG | - | chr7_4:33959387-33959406 | None:intergenic | 55.0% | |
| TTCGTGTGTGTGGGTCGCGT+GGG | - | chr7_4:33953880-33953899 | None:intergenic | 60.0% | |
| TTTCGTGTGTGTGGGTCGCG+TGG | - | chr7_4:33953881-33953900 | None:intergenic | 60.0% | |
| !! | AGCTTTGGAAGTGGCGGAGC+AGG | + | chr7_4:33955036-33955055 | Msa1150500:CDS | 60.0% |
| CCTACTGTCCAGTAGAGGGG+GGG | + | chr7_4:33957974-33957993 | Msa1150500:intron | 60.0% | |
| AATTGGGTCCCCCCCTCTAC+TGG | - | chr7_4:33957985-33958004 | None:intergenic | 60.0% | |
| CTGGGAGTCTGCTCCTCTCT+AGG | - | chr7_4:33958103-33958122 | None:intergenic | 60.0% | |
| CTAGAGAGGAGCAGACTCCC+AGG | + | chr7_4:33958101-33958120 | Msa1150500:intron | 60.0% | |
| GAGCAGACTCCCAGGGCTAT+AGG | + | chr7_4:33958109-33958128 | Msa1150500:intron | 60.0% | |
| GGCTTGGGACCTATAGCCCT+GGG | - | chr7_4:33958121-33958140 | None:intergenic | 60.0% | |
| AGGCTTGGGACCTATAGCCC+TGG | - | chr7_4:33958122-33958141 | None:intergenic | 60.0% | |
| GGTCCCAAGCCTTCACCAAC+AGG | + | chr7_4:33958130-33958149 | Msa1150500:intron | 60.0% | |
| CACCAACAGGCCAATCCTGG+GGG | + | chr7_4:33958143-33958162 | Msa1150500:intron | 60.0% | |
| ACCAACAGGCCAATCCTGGG+GGG | + | chr7_4:33958144-33958163 | Msa1150500:intron | 60.0% | |
| CCCCAAGGAACACACCTGCA+TGG | - | chr7_4:33959287-33959306 | None:intergenic | 60.0% | |
| GCAGGTTCCACCAGTTGCTC+TGG | + | chr7_4:33959377-33959396 | Msa1150500:CDS | 60.0% | |
| ! | GTTGACTGGGCTAGGTGGAG+TGG | + | chr7_4:33959453-33959472 | Msa1150500:CDS | 60.0% |
| CATGTGCATGTCGCAGCCGC+CGG | + | chr7_4:33954855-33954874 | Msa1150500:CDS | 65.0% | |
| GCAGGCTGTGAATCAGCCGG+CGG | - | chr7_4:33954874-33954893 | None:intergenic | 65.0% | |
| ! | GGAAGTGGCGGAGCAGGAGA+TGG | + | chr7_4:33955042-33955061 | Msa1150500:CDS | 65.0% |
| ! | AGTGGCGGAGCAGGAGATGG+CGG | + | chr7_4:33955045-33955064 | Msa1150500:CDS | 65.0% |
| CCCCCCCTCTACTGGACAGT+AGG | - | chr7_4:33957977-33957996 | None:intergenic | 65.0% | |
| !! | ACCCCCCAGGATTGGCCTGT+TGG | - | chr7_4:33958148-33958167 | None:intergenic | 65.0% |
| CGGCGGCTGCGACATGCACA+TGG | - | chr7_4:33954857-33954876 | None:intergenic | 70.0% | |
| ! | GGAGCAGGAGATGGCGGTGG+TGG | + | chr7_4:33955051-33955070 | Msa1150500:CDS | 70.0% |
| ! | GCAGGAGATGGCGGTGGTGG+CGG | + | chr7_4:33955054-33955073 | Msa1150500:CDS | 70.0% |
| ! | GGCGGAGCAGGAGATGGCGG+TGG | + | chr7_4:33955048-33955067 | Msa1150500:CDS | 75.0% |
| !! | GGAGATGGCGGTGGTGGCGG+TGG | + | chr7_4:33955057-33955076 | Msa1150500:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 33953647 | 33959728 | 33953647 | ID=Msa1150500;Name=Msa1150500 |
| chr7_4 | mRNA | 33953647 | 33959728 | 33953647 | ID=Msa1150500-mRNA-1;Parent=Msa1150500;Name=Msa1150500-mRNA-1;_AED=0.09;_eAED=0.09;_QI=235|1|1|1|0.75|0.66|9|243|445 |
| chr7_4 | exon | 33953647 | 33953681 | 33953647 | ID=Msa1150500-mRNA-1:exon:8074;Parent=Msa1150500-mRNA-1 |
| chr7_4 | exon | 33954037 | 33954089 | 33954037 | ID=Msa1150500-mRNA-1:exon:8075;Parent=Msa1150500-mRNA-1 |
| chr7_4 | exon | 33954493 | 33955248 | 33954493 | ID=Msa1150500-mRNA-1:exon:8076;Parent=Msa1150500-mRNA-1 |
| chr7_4 | exon | 33955361 | 33955459 | 33955361 | ID=Msa1150500-mRNA-1:exon:8077;Parent=Msa1150500-mRNA-1 |
| chr7_4 | exon | 33955632 | 33955852 | 33955632 | ID=Msa1150500-mRNA-1:exon:8078;Parent=Msa1150500-mRNA-1 |
| chr7_4 | exon | 33956070 | 33956139 | 33956070 | ID=Msa1150500-mRNA-1:exon:8079;Parent=Msa1150500-mRNA-1 |
| chr7_4 | exon | 33956228 | 33956307 | 33956228 | ID=Msa1150500-mRNA-1:exon:8080;Parent=Msa1150500-mRNA-1 |
| chr7_4 | exon | 33958308 | 33958372 | 33958308 | ID=Msa1150500-mRNA-1:exon:8081;Parent=Msa1150500-mRNA-1 |
| chr7_4 | exon | 33959292 | 33959728 | 33959292 | ID=Msa1150500-mRNA-1:exon:8082;Parent=Msa1150500-mRNA-1 |
| chr7_4 | five_prime_UTR | 33953647 | 33953681 | 33953647 | ID=Msa1150500-mRNA-1:five_prime_utr;Parent=Msa1150500-mRNA-1 |
| chr7_4 | five_prime_UTR | 33954037 | 33954089 | 33954037 | ID=Msa1150500-mRNA-1:five_prime_utr;Parent=Msa1150500-mRNA-1 |
| chr7_4 | five_prime_UTR | 33954493 | 33954639 | 33954493 | ID=Msa1150500-mRNA-1:five_prime_utr;Parent=Msa1150500-mRNA-1 |
| chr7_4 | CDS | 33954640 | 33955248 | 33954640 | ID=Msa1150500-mRNA-1:cds;Parent=Msa1150500-mRNA-1 |
| chr7_4 | CDS | 33955361 | 33955459 | 33955361 | ID=Msa1150500-mRNA-1:cds;Parent=Msa1150500-mRNA-1 |
| chr7_4 | CDS | 33955632 | 33955852 | 33955632 | ID=Msa1150500-mRNA-1:cds;Parent=Msa1150500-mRNA-1 |
| chr7_4 | CDS | 33956070 | 33956139 | 33956070 | ID=Msa1150500-mRNA-1:cds;Parent=Msa1150500-mRNA-1 |
| chr7_4 | CDS | 33956228 | 33956307 | 33956228 | ID=Msa1150500-mRNA-1:cds;Parent=Msa1150500-mRNA-1 |
| chr7_4 | CDS | 33958308 | 33958372 | 33958308 | ID=Msa1150500-mRNA-1:cds;Parent=Msa1150500-mRNA-1 |
| chr7_4 | CDS | 33959292 | 33959485 | 33959292 | ID=Msa1150500-mRNA-1:cds;Parent=Msa1150500-mRNA-1 |
| chr7_4 | three_prime_UTR | 33959486 | 33959728 | 33959486 | ID=Msa1150500-mRNA-1:three_prime_utr;Parent=Msa1150500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
