AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1107110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1107110 MtrunA17_Chr7g0240371 95.000 520 21 3 1 519 1 516 0.0 963
Msa1107110 MtrunA17_Chr4g0008591 50.164 608 204 17 2 519 3 601 1.28e-168 489
Msa1107110 MtrunA17_Chr4g0028701 42.543 409 166 13 127 469 231 636 6.81e-83 270
Msa1107110 MtrunA17_Chr2g0327021 47.719 285 109 7 128 380 235 511 1.68e-76 252
Msa1107110 MtrunA17_Chr8g0387321 35.763 439 214 12 141 516 185 618 7.22e-65 221
Msa1107110 MtrunA17_Chr8g0373801 42.532 308 135 8 122 395 364 663 2.38e-63 221
Msa1107110 MtrunA17_Chr1g0155681 40.196 306 148 6 145 427 174 467 2.64e-61 212
Msa1107110 MtrunA17_Chr4g0025521 44.128 281 119 7 141 395 217 485 3.47e-61 213
Msa1107110 MtrunA17_Chr5g0403251 42.254 284 137 7 137 395 330 611 5.18e-61 213
Msa1107110 MtrunA17_Chr3g0141941 40.909 264 128 6 137 378 158 415 3.26e-59 204
Msa1107110 MtrunA17_Chr3g0141931 42.593 270 129 7 138 386 162 426 5.38e-59 201
Msa1107110 MtrunA17_Chr1g0177751 44.674 291 132 7 140 409 160 442 7.79e-59 206
Msa1107110 MtrunA17_Chr7g0267481 53.061 196 82 4 203 392 250 441 1.69e-58 205
Msa1107110 MtrunA17_Chr1g0151681 30.925 346 196 12 61 375 158 491 4.48e-38 146
Msa1107110 MtrunA17_Chr5g0398181 38.889 90 50 2 297 381 201 290 2.03e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1107110 AT2G27990.1 50.794 252 115 4 131 380 252 496 4.59e-76 251
Msa1107110 AT2G16400.1 36.750 400 213 11 135 519 108 482 3.98e-67 224
Msa1107110 AT1G75410.1 46.415 265 110 9 136 378 162 416 6.37e-67 225
Msa1107110 AT1G75410.2 46.415 265 110 9 136 378 162 416 6.37e-67 225
Msa1107110 AT1G19700.1 44.610 269 114 7 137 378 161 421 8.36e-67 225
Msa1107110 AT1G19700.3 44.610 269 114 7 137 378 161 421 8.36e-67 225
Msa1107110 AT1G19700.5 44.610 269 114 7 137 378 161 421 8.36e-67 225
Msa1107110 AT1G19700.4 44.610 269 114 7 137 378 161 421 8.36e-67 225
Msa1107110 AT1G19700.2 44.610 269 114 7 137 378 161 421 8.36e-67 225
Msa1107110 AT4G34610.2 38.936 357 164 12 145 468 144 479 2.66e-61 210
Msa1107110 AT4G34610.4 38.936 357 164 12 145 468 144 479 2.66e-61 210
Msa1107110 AT4G34610.3 38.936 357 164 12 145 468 144 479 2.66e-61 210
Msa1107110 AT4G34610.1 38.936 357 164 12 145 468 144 479 2.66e-61 210
Msa1107110 AT5G41410.1 34.965 429 216 14 142 518 194 611 3.06e-58 204
Msa1107110 AT4G36870.2 45.136 257 116 8 141 375 312 565 9.65e-58 204
Msa1107110 AT4G36870.1 45.136 257 116 8 141 375 312 565 9.65e-58 204
Msa1107110 AT2G27220.1 40.441 272 133 7 147 409 82 333 2.85e-57 197
Msa1107110 AT2G27220.3 40.441 272 133 7 147 409 82 333 2.85e-57 197
Msa1107110 AT2G23760.2 42.803 264 113 7 141 375 237 491 4.23e-57 201
Msa1107110 AT2G23760.1 42.803 264 113 7 141 375 237 491 4.23e-57 201
Msa1107110 AT2G23760.3 42.803 264 113 7 141 375 237 491 4.23e-57 201
Msa1107110 AT2G35940.3 44.061 261 109 5 142 369 190 446 2.72e-55 197
Msa1107110 AT2G35940.1 44.061 261 109 5 142 369 190 446 2.72e-55 197
Msa1107110 AT2G35940.2 44.061 261 109 5 142 369 190 446 2.72e-55 197
Msa1107110 AT2G27220.2 38.732 284 139 7 147 409 82 351 1.03e-53 188
Msa1107110 AT1G75430.1 37.500 272 143 4 142 390 17 284 5.65e-53 181
Msa1107110 AT1G75410.3 43.802 242 104 9 136 355 162 393 1.41e-52 184
Msa1107110 AT2G23760.4 32.200 441 174 14 141 469 237 664 7.24e-48 176
Msa1107110 AT2G27990.2 42.718 206 109 4 131 334 252 450 6.94e-45 164
Msa1107110 AT4G36870.4 41.597 238 114 8 141 356 312 546 4.98e-44 164
Msa1107110 AT4G36870.3 41.102 236 114 8 141 354 312 544 1.07e-42 160
Msa1107110 AT4G32980.1 31.633 294 179 7 96 375 154 439 1.86e-38 147
Msa1107110 AT4G32980.2 31.633 294 179 7 96 375 154 439 1.86e-38 147
Msa1107110 AT1G75430.2 30.556 216 123 4 142 334 17 228 1.58e-25 106
Msa1107110 AT1G62990.1 42.105 76 39 2 297 367 200 275 2.29e-11 65.1
Msa1107110 AT1G23380.2 50.909 55 27 0 315 369 255 309 3.80e-11 65.1
Msa1107110 AT1G23380.1 50.909 55 27 0 315 369 253 307 4.11e-11 64.7
Msa1107110 AT1G70510.1 50.909 55 27 0 315 369 237 291 9.04e-11 63.5
Msa1107110 AT1G70510.2 50.909 55 27 0 315 369 241 295 9.76e-11 63.5

Find 117 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATGATCTTATACGTAAAT+TGG 0.128783 7_3:+48519870 None:intergenic
GAAACCTGCACAACAATTAT+TGG 0.152856 7_3:-48519265 Msa1107110:CDS
CAATTCCAGAATAGGCAATT+TGG 0.193263 7_3:-48515944 Msa1107110:CDS
ACTTCATTTGAATATGTTTC+CGG 0.224546 7_3:-48517277 Msa1107110:CDS
CTCTCCCAAATTGCCTATTC+TGG 0.259082 7_3:+48515939 None:intergenic
AACTACTAACCATGTTTCTT+TGG 0.259391 7_3:-48515853 Msa1107110:three_prime_UTR
CTTCATCAAAATCATGGAAT+TGG 0.260611 7_3:-48516049 Msa1107110:CDS
TCATAATCACAAGATAAATT+AGG 0.276291 7_3:-48515828 Msa1107110:three_prime_UTR
CTGTTGTTGATCATGTTTCT+AGG 0.276539 7_3:-48519350 Msa1107110:CDS
ATTGAAATTTGATTCTAGTT+TGG 0.276820 7_3:-48515801 Msa1107110:three_prime_UTR
CGCAGCTCCGTATGCAAGTT+TGG 0.286462 7_3:-48517245 Msa1107110:CDS
TTTGAATATGTTTCCGGCCT+TGG 0.297614 7_3:-48517271 Msa1107110:CDS
TTGAAATTTGATTCTAGTTT+GGG 0.301180 7_3:-48515800 Msa1107110:three_prime_UTR
TCATCTCTTTGTGATTCCTT+TGG 0.313062 7_3:+48516289 None:intergenic
AGCGTGCTGTCAGTGTTCTT+AGG 0.318063 7_3:-48517012 Msa1107110:CDS
TTTCAAGAATCTAAAATGTT+TGG 0.323804 7_3:+48517207 None:intergenic
TCTAGGAACACGGTTCCATT+AGG 0.325865 7_3:-48519333 Msa1107110:CDS
GAAGGTAAAGGTGAATAGTT+AGG 0.327476 7_3:+48519591 None:intergenic
CAGCAGCACTCATCTGATTC+TGG 0.330179 7_3:+48519391 None:intergenic
GTTCCATTAGGGCCATTTAC+AGG 0.333535 7_3:-48519321 Msa1107110:CDS
TCAATCCTGAACAGGTTTGC+AGG 0.345113 7_3:-48517339 Msa1107110:intron
ACAGAAGCATAACCTGTAAA+TGG 0.347909 7_3:+48519309 None:intergenic
AATTCCAGAATAGGCAATTT+GGG 0.349127 7_3:-48515943 Msa1107110:CDS
GATGATAAAGATAAAGATAA+AGG 0.358607 7_3:+48519426 None:intergenic
AAGATTCAATGAAACTTGTT+TGG 0.360190 7_3:+48519628 None:intergenic
TGCTGCTGATGCATCTTTGA+TGG 0.376363 7_3:-48519199 Msa1107110:CDS
ATGTGTTACAGGTGTCTAAT+TGG 0.376653 7_3:-48516384 Msa1107110:intron
GCGTGCTGTCAGTGTTCTTA+GGG 0.378409 7_3:-48517011 Msa1107110:CDS
TAACCTGTAAATGGCCCTAA+TGG 0.383820 7_3:+48519318 None:intergenic
GGTAACAGTGGAATGATTAA+TGG 0.384759 7_3:-48519165 Msa1107110:CDS
TTTCTCTTCTGCTTTGTTGT+GGG 0.388583 7_3:+48519673 None:intergenic
GATGATCTTATACGTAAATT+GGG 0.393261 7_3:+48519871 None:intergenic
TAAATGCAAGAGTAAGGCTT+TGG 0.400143 7_3:-48516357 Msa1107110:CDS
TGAGGAGTTTGATAAAGAAA+AGG 0.401340 7_3:+48519519 None:intergenic
AAAATCAATAATAAAGAATA+GGG 0.402142 7_3:+48519751 None:intergenic
GAGGAGTTTGATAAAGAAAA+GGG 0.406406 7_3:+48519520 None:intergenic
CCTCTTTGAGGTCGCCAAAC+AGG 0.409862 7_3:+48517043 None:intergenic
AACCCTGGCCTTTGACTGTA+AGG 0.411066 7_3:+48517085 None:intergenic
TTCATCAAAATCATGGAATT+GGG 0.411246 7_3:-48516048 Msa1107110:CDS
CTAGGAACACGGTTCCATTA+GGG 0.419262 7_3:-48519332 Msa1107110:CDS
GGTTTATAAATGCAAGAGTA+AGG 0.420041 7_3:-48516363 Msa1107110:CDS
AACATGTTCAACAACCTGTT+TGG 0.421813 7_3:-48517057 Msa1107110:CDS
TCATCCAATAATTGTTGTGC+AGG 0.423901 7_3:+48519261 None:intergenic
CGCTCAGGGAGCCCTCTTTG+AGG 0.433129 7_3:+48517031 None:intergenic
ACTGACCAGCTTCAGTATAT+CGG 0.436419 7_3:-48517175 Msa1107110:CDS
AGGTGAATAGTTAGGGTTAA+GGG 0.439612 7_3:+48519599 None:intergenic
GATTCTAGTTTGGGATTAAG+TGG 0.440527 7_3:-48515791 Msa1107110:three_prime_UTR
CTAATGTTGGCTAAACAAAC+TGG 0.446507 7_3:-48516507 Msa1107110:CDS
TTGTATACATGATTCATTTG+AGG 0.448929 7_3:+48519501 None:intergenic
AAGGTGAATAGTTAGGGTTA+AGG 0.455170 7_3:+48519598 None:intergenic
CTCGGTCTTCATCAAAATCA+TGG 0.458609 7_3:-48516055 Msa1107110:CDS
AATCAACAAGTTGGTAATGT+TGG 0.479434 7_3:-48516127 Msa1107110:CDS
GTTTAGTACTATGGCTGATG+AGG 0.481895 7_3:-48519718 Msa1107110:exon
AAGGTAAAGGTGAATAGTTA+GGG 0.487879 7_3:+48519592 None:intergenic
GCCCCTTACAGTCAAAGGCC+AGG 0.493461 7_3:-48517088 Msa1107110:CDS
AGAACACTGACAGCACGCTC+AGG 0.494420 7_3:+48517016 None:intergenic
GATAGTGAAATGAAAAGATA+TGG 0.499077 7_3:+48519832 None:intergenic
TTGCTTGCGATACTATGATT+CGG 0.499860 7_3:+48516148 None:intergenic
TTTAGTACTATGGCTGATGA+GGG 0.503174 7_3:-48519717 Msa1107110:exon
TTACTGTTTATAGCATCTAA+AGG 0.509725 7_3:+48519543 None:intergenic
GATGATACACTTGGTGATGA+TGG 0.511653 7_3:-48519135 Msa1107110:CDS
ATGTGTATTTCCTCCACCAT+TGG 0.521327 7_3:+48516331 None:intergenic
CGGAGCTGCGTTACCAAGGC+CGG 0.523680 7_3:+48517258 None:intergenic
CAACATTAGCTTGTCAGTAT+CGG 0.536944 7_3:+48516521 None:intergenic
CCATCGCCGTTGTGAAACCT+TGG 0.538655 7_3:+48517112 None:intergenic
TTATCAGATAAGCAATAGAA+AGG 0.539123 7_3:-48517143 Msa1107110:CDS
CCAAGGTTTCACAACGGCGA+TGG 0.539915 7_3:-48517112 Msa1107110:CDS
ATCGCAAGCAATCAACAAGT+TGG 0.542496 7_3:-48516136 Msa1107110:CDS
CTGTCAGTGTTCTTAGGGGA+TGG 0.544619 7_3:-48517006 Msa1107110:CDS
AAAAGAGAGAAAGAGAGTGA+TGG 0.545762 7_3:+48519787 None:intergenic
CCCTGGCCTTTGACTGTAAG+GGG 0.546356 7_3:+48517087 None:intergenic
GGAGTGAGCATGATGAATAA+TGG 0.547619 7_3:-48516106 Msa1107110:CDS
AACTTGTCTGTGGAGGTAGA+TGG 0.550200 7_3:+48516223 None:intergenic
ATGGAGCCCCTTACAGTCAA+AGG 0.556822 7_3:-48517093 Msa1107110:CDS
ACTTGCCGATATACTGAAGC+TGG 0.560095 7_3:+48517170 None:intergenic
CGATACTGACAAGCTAATGT+TGG 0.560183 7_3:-48516520 Msa1107110:CDS
ATTAGCTTGTCAGTATCGGT+AGG 0.560382 7_3:+48516525 None:intergenic
AAAGAGAGTGATGGAAGTGA+TGG 0.560810 7_3:+48519796 None:intergenic
AGTGAAGGATCGTAAAGAGA+AGG 0.562891 7_3:+48519573 None:intergenic
GGATCGTAAAGAGAAGGTAA+AGG 0.570346 7_3:+48519579 None:intergenic
TTGGATGAGATATGTGATGT+TGG 0.571767 7_3:-48519246 Msa1107110:CDS
TTTATAGCCAAACTTGCATA+CGG 0.572894 7_3:+48517238 None:intergenic
AACTGGTCTATCTCGTAACC+AGG 0.577110 7_3:-48516490 Msa1107110:intron
AATGGTGTATCTTTGACGCT+CGG 0.578190 7_3:-48516073 Msa1107110:CDS
TCTTTGATGGAAACTAATCA+TGG 0.579826 7_3:-48519186 Msa1107110:CDS
GCTTTGGAAGCCAATGGTGG+AGG 0.582607 7_3:-48516341 Msa1107110:CDS
GAACACTGACAGCACGCTCA+GGG 0.586445 7_3:+48517017 None:intergenic
CTGTTTGGCGACCTCAAAGA+GGG 0.600827 7_3:-48517042 Msa1107110:CDS
GAATCTAAAATGTTTGGACA+TGG 0.606211 7_3:+48517213 None:intergenic
CCCCTTACAGTCAAAGGCCA+GGG 0.608843 7_3:-48517087 Msa1107110:CDS
GAAACTAATCATGGTAACAG+TGG 0.611291 7_3:-48519177 Msa1107110:CDS
ATTATTAACAGTGCTTGATG+AGG 0.616917 7_3:-48519094 Msa1107110:intron
AATAATGGTGCAACAAGCAA+TGG 0.619469 7_3:-48516091 Msa1107110:CDS
TGAATAGTTAGGGTTAAGGG+TGG 0.619527 7_3:+48519602 None:intergenic
GGCACTCATGTTGAAAGACT+CGG 0.619920 7_3:+48516021 None:intergenic
AGTAAGGCTTTGGAAGCCAA+TGG 0.623632 7_3:-48516347 Msa1107110:CDS
TGATCATGTTTCTAGGAACA+CGG 0.625288 7_3:-48519343 Msa1107110:CDS
CCTGTTTGGCGACCTCAAAG+AGG 0.626862 7_3:-48517043 Msa1107110:CDS
ACCCTGGCCTTTGACTGTAA+GGG 0.629132 7_3:+48517086 None:intergenic
TGAATCACAGCAATCTCCAA+AGG 0.631385 7_3:-48516305 Msa1107110:CDS
TGAACATGTTCTATAAACCC+TGG 0.636335 7_3:+48517070 None:intergenic
TTAGCTTGTCAGTATCGGTA+GGG 0.637894 7_3:+48516526 None:intergenic
TCTAAAGGTGAAATGAGTGA+AGG 0.639475 7_3:+48519558 None:intergenic
ATACACTTGGTGATGATGGA+AGG 0.640811 7_3:-48519131 Msa1107110:CDS
AAGGCTTTGGAAGCCAATGG+TGG 0.647272 7_3:-48516344 Msa1107110:CDS
ATAGAAAGGATGAATCTCCA+AGG 0.653144 7_3:-48517129 Msa1107110:CDS
ATGAATCATGTATACAACGA+TGG 0.656023 7_3:-48519495 Msa1107110:CDS
ATCGTGAAACTTGTCTGTGG+AGG 0.656497 7_3:+48516216 None:intergenic
CGTGCTGTCAGTGTTCTTAG+GGG 0.662282 7_3:-48517010 Msa1107110:CDS
ATTATGAAACCAAAGAAACA+TGG 0.673561 7_3:+48515844 None:intergenic
GAATAGTTAGGGTTAAGGGT+GGG 0.680467 7_3:+48519603 None:intergenic
CTGGAATTGAAAACCACTCG+CGG 0.686077 7_3:+48515958 None:intergenic
AATCATGTATACAACGATGG+TGG 0.691205 7_3:-48519492 Msa1107110:CDS
ATCCTGAACAGGTTTGCAGG+AGG 0.698719 7_3:-48517336 Msa1107110:intron
GGTGTTGATGATGATACACT+TGG 0.700349 7_3:-48519144 Msa1107110:CDS
AACATCGTGAAACTTGTCTG+TGG 0.748355 7_3:+48516213 None:intergenic
GAATCTCCAAGGTTTCACAA+CGG 0.755483 7_3:-48517118 Msa1107110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATCAATAATAAAGAATA+GGG + chr7_3:48515867-48515886 None:intergenic 10.0%
!! AAAAATCAATAATAAAGAAT+AGG + chr7_3:48515868-48515887 None:intergenic 10.0%
!! GAAAAAAACAATATAAAAAT+TGG - chr7_3:48516690-48516709 Msa1107110:intron 10.0%
!!! ATGAATTTAATATCTTTTTT+AGG + chr7_3:48516932-48516951 None:intergenic 10.0%
!!! TTAATTTAGTTTATATTGTT+TGG - chr7_3:48517143-48517162 Msa1107110:CDS 10.0%
!!! ATATAATCCAATGTAATTTT+TGG - chr7_3:48516779-48516798 Msa1107110:intron 15.0%
!!! TTTTTTACCAAAAATTACAT+TGG + chr7_3:48516789-48516808 None:intergenic 15.0%
!!! ATTTAATATCTTTTTTAGGA+AGG + chr7_3:48516928-48516947 None:intergenic 15.0%
!! TATAAACTAAATTAAAAACG+TGG + chr7_3:48517138-48517157 None:intergenic 15.0%
!! AATGTAATTAAAAACATTGT+CGG - chr7_3:48517188-48517207 Msa1107110:CDS 15.0%
!! AAAAAACATTAAAACTCATT+TGG - chr7_3:48517290-48517309 Msa1107110:CDS 15.0%
!!! ATTTTATTAAAGTGATTGAT+TGG - chr7_3:48517625-48517644 Msa1107110:intron 15.0%
!! AAAAAAAGTTGAAATAACAA+CGG - chr7_3:48518888-48518907 Msa1107110:intron 15.0%
!! GATGATAAAGATAAAGATAA+AGG + chr7_3:48516192-48516211 None:intergenic 20.0%
!!! TTTTTTGTTCTTTCTCTTTT+AGG - chr7_3:48516561-48516580 Msa1107110:intron 20.0%
!!! ATTCTGATCACTTTTTTATT+TGG - chr7_3:48516818-48516837 Msa1107110:intron 20.0%
!!! TTCTGATCACTTTTTTATTT+GGG - chr7_3:48516819-48516838 Msa1107110:intron 20.0%
!! GATGTTTAAAGAAAAAACAA+TGG - chr7_3:48517399-48517418 Msa1107110:intron 20.0%
!! AAACTTATCCTATAGAATAT+CGG + chr7_3:48517494-48517513 None:intergenic 20.0%
!! TCACTTTAATAAAATACTCA+TGG + chr7_3:48517620-48517639 None:intergenic 20.0%
!!! TAAATCAAAACACACTTTTT+TGG + chr7_3:48517679-48517698 None:intergenic 20.0%
!!! GCAAAAAACTTTTTTTTAGA+AGG + chr7_3:48517757-48517776 None:intergenic 20.0%
!!! TATTTTGAGATCTTACAAAT+CGG + chr7_3:48517970-48517989 None:intergenic 20.0%
!!! TTTCAAGAATCTAAAATGTT+TGG + chr7_3:48518411-48518430 None:intergenic 20.0%
!! AAGGGTTTAAAAAGAATATA+TGG + chr7_3:48518803-48518822 None:intergenic 20.0%
!! AAAAAAGTTGAAATAACAAC+GGG - chr7_3:48518889-48518908 Msa1107110:intron 20.0%
!! ATATATTTAATGACCGAAAT+TGG + chr7_3:48518922-48518941 None:intergenic 20.0%
!! TAAACACATGTCTTATAAAA+CGG + chr7_3:48519036-48519055 None:intergenic 20.0%
!! TTAATCATGAAAAATTTACC+TGG + chr7_3:48519146-48519165 None:intergenic 20.0%
!! TCATAATCACAAGATAAATT+AGG - chr7_3:48519787-48519806 Msa1107110:five_prime_UTR 20.0%
!!! ATTGAAATTTGATTCTAGTT+TGG - chr7_3:48519814-48519833 Msa1107110:five_prime_UTR 20.0%
!!! TTGAAATTTGATTCTAGTTT+GGG - chr7_3:48519815-48519834 Msa1107110:five_prime_UTR 20.0%
! GATAGTGAAATGAAAAGATA+TGG + chr7_3:48515786-48515805 None:intergenic 25.0%
!!! GTTTTGTTTGTTTAGTACTA+TGG - chr7_3:48515888-48515907 Msa1107110:exon 25.0%
!! AAGATTCAATGAAACTTGTT+TGG + chr7_3:48515990-48516009 None:intergenic 25.0%
! TTACTGTTTATAGCATCTAA+AGG + chr7_3:48516075-48516094 None:intergenic 25.0%
! TTGTATACATGATTCATTTG+AGG + chr7_3:48516117-48516136 None:intergenic 25.0%
! ATAAAAGTTAGACATCGTAT+TGG - chr7_3:48516628-48516647 Msa1107110:intron 25.0%
! AGTTGTTAAAATGAAAACCA+CGG + chr7_3:48516860-48516879 None:intergenic 25.0%
! TCGCAACATAATAAAAATAC+TGG - chr7_3:48516888-48516907 Msa1107110:intron 25.0%
! GTTGTATTTATGTGACTATA+TGG - chr7_3:48517455-48517474 Msa1107110:intron 25.0%
! AACTTATCCTATAGAATATC+GGG + chr7_3:48517493-48517512 None:intergenic 25.0%
!!! TTTCAAAAGTATTGATGAGA+AGG - chr7_3:48517533-48517552 Msa1107110:intron 25.0%
!! TGGTATAAAATCTTTGCTAT+GGG + chr7_3:48517600-48517619 None:intergenic 25.0%
! ATGGTATAAAATCTTTGCTA+TGG + chr7_3:48517601-48517620 None:intergenic 25.0%
! TATTAAAGTGATTGATTGGT+AGG - chr7_3:48517629-48517648 Msa1107110:intron 25.0%
!! GGAGTAAATATCTTTTCTAA+AGG + chr7_3:48517658-48517677 None:intergenic 25.0%
! GATTTATTCATCTTGTTCAA+AGG - chr7_3:48517693-48517712 Msa1107110:intron 25.0%
! ATAGAATCAGAATATGCAAA+TGG - chr7_3:48517840-48517859 Msa1107110:intron 25.0%
! AATGTCCAATCTCAAAATAT+CGG - chr7_3:48517902-48517921 Msa1107110:intron 25.0%
!! TGAAACAGTATATTTTCTAC+CGG + chr7_3:48518047-48518066 None:intergenic 25.0%
!! CTGTTTCACTTTAATTTATC+CGG - chr7_3:48518059-48518078 Msa1107110:intron 25.0%
! AATTTCATCTTGCATCAAAT+TGG + chr7_3:48518097-48518116 None:intergenic 25.0%
! AATTTGATGCAAGATGAAAT+TGG - chr7_3:48518096-48518115 Msa1107110:intron 25.0%
! ATTACAACCTAAAGATCTAA+AGG + chr7_3:48518163-48518182 None:intergenic 25.0%
! AAAAGATTAAGATGTAGAAG+TGG - chr7_3:48518204-48518223 Msa1107110:intron 25.0%
! ACTTCATTTGAATATGTTTC+CGG - chr7_3:48518338-48518357 Msa1107110:intron 25.0%
! TTATCAGATAAGCAATAGAA+AGG - chr7_3:48518472-48518491 Msa1107110:intron 25.0%
! AGATTGAAATAACACACTTA+CGG + chr7_3:48518656-48518675 None:intergenic 25.0%
!!! TTTTTTAGAAATCACAGTTG+AGG - chr7_3:48518738-48518757 Msa1107110:intron 25.0%
! TTCATCAAAATCATGGAATT+GGG - chr7_3:48519567-48519586 Msa1107110:CDS 25.0%
! ATTATGAAACCAAAGAAACA+TGG + chr7_3:48519774-48519793 None:intergenic 25.0%
!! CATTCTTTTTATCTTAGTAG+TGG - chr7_3:48519854-48519873 Msa1107110:five_prime_UTR 25.0%
AAGGTAAAGGTGAATAGTTA+GGG + chr7_3:48516026-48516045 None:intergenic 30.0%
GAGGAGTTTGATAAAGAAAA+GGG + chr7_3:48516098-48516117 None:intergenic 30.0%
TGAGGAGTTTGATAAAGAAA+AGG + chr7_3:48516099-48516118 None:intergenic 30.0%
ATGAATCATGTATACAACGA+TGG - chr7_3:48516120-48516139 Msa1107110:CDS 30.0%
TCTTTGATGGAAACTAATCA+TGG - chr7_3:48516429-48516448 Msa1107110:intron 30.0%
ATTATTAACAGTGCTTGATG+AGG - chr7_3:48516521-48516540 Msa1107110:CDS 30.0%
!!! GATCACTTTTTTATTTGGGT+TGG - chr7_3:48516823-48516842 Msa1107110:intron 30.0%
!!! CTTTTTTATTTGGGTTGGTT+TGG - chr7_3:48516828-48516847 Msa1107110:intron 30.0%
! AATGGTTGTACTCTTTTTGT+GGG - chr7_3:48517417-48517436 Msa1107110:intron 30.0%
! CTTTTTACCCGATATTCTAT+AGG - chr7_3:48517483-48517502 Msa1107110:intron 30.0%
AAGGAATATATGCTGAAGAA+TGG - chr7_3:48517552-48517571 Msa1107110:intron 30.0%
AGGAATATATGCTGAAGAAT+GGG - chr7_3:48517553-48517572 Msa1107110:intron 30.0%
!!! AGTTTTTTGCCTAAAGAGAT+TGG - chr7_3:48517767-48517786 Msa1107110:intron 30.0%
TTTCAGAAACCAATCTCTTT+AGG + chr7_3:48517779-48517798 None:intergenic 30.0%
!!! GAGATTGGTTTCTGAAATTT+TGG - chr7_3:48517782-48517801 Msa1107110:intron 30.0%
AAAACTGCGTGATACAATTA+CGG + chr7_3:48517874-48517893 None:intergenic 30.0%
AAATTGGTCATAGTAATTGC+CGG + chr7_3:48518081-48518100 None:intergenic 30.0%
TTTATAGCCAAACTTGCATA+CGG + chr7_3:48518380-48518399 None:intergenic 30.0%
! GAATCTAAAATGTTTGGACA+TGG + chr7_3:48518405-48518424 None:intergenic 30.0%
! TTCTAGTTGTGACATGTATA+TGG - chr7_3:48519001-48519020 Msa1107110:intron 30.0%
GGTTTATAAATGCAAGAGTA+AGG - chr7_3:48519252-48519271 Msa1107110:CDS 30.0%
!! AATCAACAAGTTGGTAATGT+TGG - chr7_3:48519488-48519507 Msa1107110:CDS 30.0%
CTTCATCAAAATCATGGAAT+TGG - chr7_3:48519566-48519585 Msa1107110:CDS 30.0%
AATTCCAGAATAGGCAATTT+GGG - chr7_3:48519672-48519691 Msa1107110:CDS 30.0%
! CAATTTGGGAGAGATTTTAT+TGG - chr7_3:48519686-48519705 Msa1107110:CDS 30.0%
AACTACTAACCATGTTTCTT+TGG - chr7_3:48519762-48519781 Msa1107110:five_prime_UTR 30.0%
AAAAGAGAGAAAGAGAGTGA+TGG + chr7_3:48515831-48515850 None:intergenic 35.0%
TTTAGTACTATGGCTGATGA+GGG - chr7_3:48515898-48515917 Msa1107110:CDS 35.0%
! TTTCTCTTCTGCTTTGTTGT+GGG + chr7_3:48515945-48515964 None:intergenic 35.0%
!! TTTTCTCTTCTGCTTTGTTG+TGG + chr7_3:48515946-48515965 None:intergenic 35.0%
AGGTGAATAGTTAGGGTTAA+GGG + chr7_3:48516019-48516038 None:intergenic 35.0%
AAGGTGAATAGTTAGGGTTA+AGG + chr7_3:48516020-48516039 None:intergenic 35.0%
GAAGGTAAAGGTGAATAGTT+AGG + chr7_3:48516027-48516046 None:intergenic 35.0%
TCTAAAGGTGAAATGAGTGA+AGG + chr7_3:48516060-48516079 None:intergenic 35.0%
AATCATGTATACAACGATGG+TGG - chr7_3:48516123-48516142 Msa1107110:CDS 35.0%
CTGTTGTTGATCATGTTTCT+AGG - chr7_3:48516265-48516284 Msa1107110:CDS 35.0%
!! TGATCATGTTTCTAGGAACA+CGG - chr7_3:48516272-48516291 Msa1107110:CDS 35.0%
! ACAGAAGCATAACCTGTAAA+TGG + chr7_3:48516309-48516328 None:intergenic 35.0%
!! AGGTTATGCTTCTGTTTTGA+AGG - chr7_3:48516314-48516333 Msa1107110:CDS 35.0%
!! GGTTATGCTTCTGTTTTGAA+GGG - chr7_3:48516315-48516334 Msa1107110:CDS 35.0%
GAAACCTGCACAACAATTAT+TGG - chr7_3:48516350-48516369 Msa1107110:CDS 35.0%
TCATCCAATAATTGTTGTGC+AGG + chr7_3:48516357-48516376 None:intergenic 35.0%
TTGGATGAGATATGTGATGT+TGG - chr7_3:48516369-48516388 Msa1107110:CDS 35.0%
GAAACTAATCATGGTAACAG+TGG - chr7_3:48516438-48516457 Msa1107110:intron 35.0%
GGTAACAGTGGAATGATTAA+TGG - chr7_3:48516450-48516469 Msa1107110:intron 35.0%
GGAAACCCTATTCATACATA+CGG - chr7_3:48516711-48516730 Msa1107110:intron 35.0%
CAACACCGTATGTATGAATA+GGG + chr7_3:48516719-48516738 None:intergenic 35.0%
TCAACACCGTATGTATGAAT+AGG + chr7_3:48516720-48516739 None:intergenic 35.0%
!! TTATTTGGGTTGGTTTGGTT+TGG - chr7_3:48516833-48516852 Msa1107110:intron 35.0%
AACATTGTCGGAAACATTGT+TGG - chr7_3:48517200-48517219 Msa1107110:CDS 35.0%
! TTGATAGCTCCATTGAACTA+AGG + chr7_3:48517318-48517337 None:intergenic 35.0%
TTCAATGGAGCTATCAACTT+GGG - chr7_3:48517321-48517340 Msa1107110:CDS 35.0%
GGACATGGCATTAATAACAA+TGG - chr7_3:48517342-48517361 Msa1107110:intron 35.0%
CATGGCATTAATAACAATGG+TGG - chr7_3:48517345-48517364 Msa1107110:intron 35.0%
! CAATGGTTGTACTCTTTTTG+TGG - chr7_3:48517416-48517435 Msa1107110:intron 35.0%
! CTCTTTTTGTGGGTAGATTT+TGG - chr7_3:48517427-48517446 Msa1107110:intron 35.0%
AGAATATGCAAATGGATGTG+CGG - chr7_3:48517848-48517867 Msa1107110:intron 35.0%
TCCAATCTCAAAATATCGGT+CGG - chr7_3:48517906-48517925 Msa1107110:intron 35.0%
! AAGATCTAAAGGTGCACTTT+AGG + chr7_3:48518152-48518171 None:intergenic 35.0%
AAGTGCACCTTTAGATCTTT+AGG - chr7_3:48518153-48518172 Msa1107110:intron 35.0%
TTAAGATGTAGAAGTGGAAG+TGG - chr7_3:48518210-48518229 Msa1107110:intron 35.0%
ATAGAAAGGATGAATCTCCA+AGG - chr7_3:48518486-48518505 Msa1107110:intron 35.0%
TGAACATGTTCTATAAACCC+TGG + chr7_3:48518548-48518567 None:intergenic 35.0%
AACATGTTCAACAACCTGTT+TGG - chr7_3:48518558-48518577 Msa1107110:intron 35.0%
TCAGCTGTGATATACACATT+AGG - chr7_3:48518838-48518857 Msa1107110:intron 35.0%
AAGTTGAAATAACAACGGGT+TGG - chr7_3:48518893-48518912 Msa1107110:intron 35.0%
CACATGTCTTATAAAACGGT+TGG + chr7_3:48519032-48519051 None:intergenic 35.0%
!! CAACATTAGCTTGTCAGTAT+CGG + chr7_3:48519097-48519116 None:intergenic 35.0%
! CTAATGTTGGCTAAACAAAC+TGG - chr7_3:48519108-48519127 Msa1107110:CDS 35.0%
ATGTGTTACAGGTGTCTAAT+TGG - chr7_3:48519231-48519250 Msa1107110:CDS 35.0%
TAAATGCAAGAGTAAGGCTT+TGG - chr7_3:48519258-48519277 Msa1107110:CDS 35.0%
TCATCTCTTTGTGATTCCTT+TGG + chr7_3:48519329-48519348 None:intergenic 35.0%
TTGCTTGCGATACTATGATT+CGG + chr7_3:48519470-48519489 None:intergenic 35.0%
AATAATGGTGCAACAAGCAA+TGG - chr7_3:48519524-48519543 Msa1107110:CDS 35.0%
! GTGGTTTTCAATTCCAGAAT+AGG - chr7_3:48519663-48519682 Msa1107110:CDS 35.0%
CAATTCCAGAATAGGCAATT+TGG - chr7_3:48519671-48519690 Msa1107110:CDS 35.0%
! TTTGGGAGAGATTTTATTGG+TGG - chr7_3:48519689-48519708 Msa1107110:CDS 35.0%
! TTGGGAGAGATTTTATTGGT+GGG - chr7_3:48519690-48519709 Msa1107110:CDS 35.0%
!! GATTCTAGTTTGGGATTAAG+TGG - chr7_3:48519824-48519843 Msa1107110:five_prime_UTR 35.0%
! AAAGAGAGTGATGGAAGTGA+TGG + chr7_3:48515822-48515841 None:intergenic 40.0%
GTTTAGTACTATGGCTGATG+AGG - chr7_3:48515897-48515916 Msa1107110:exon 40.0%
GAATAGTTAGGGTTAAGGGT+GGG + chr7_3:48516015-48516034 None:intergenic 40.0%
TGAATAGTTAGGGTTAAGGG+TGG + chr7_3:48516016-48516035 None:intergenic 40.0%
GGATCGTAAAGAGAAGGTAA+AGG + chr7_3:48516039-48516058 None:intergenic 40.0%
AGTGAAGGATCGTAAAGAGA+AGG + chr7_3:48516045-48516064 None:intergenic 40.0%
TAACCTGTAAATGGCCCTAA+TGG + chr7_3:48516300-48516319 None:intergenic 40.0%
!! GGTGTTGATGATGATACACT+TGG - chr7_3:48516471-48516490 Msa1107110:intron 40.0%
!! GATGATACACTTGGTGATGA+TGG - chr7_3:48516480-48516499 Msa1107110:intron 40.0%
!! ATACACTTGGTGATGATGGA+AGG - chr7_3:48516484-48516503 Msa1107110:intron 40.0%
!! TCATACATACGGTGTTGATG+TGG - chr7_3:48516722-48516741 Msa1107110:intron 40.0%
! CATTTGGCTCCTTAGTTCAA+TGG - chr7_3:48517306-48517325 Msa1107110:CDS 40.0%
GTTCAATGGAGCTATCAACT+TGG - chr7_3:48517320-48517339 Msa1107110:CDS 40.0%
CCAATCTCAAAATATCGGTC+GGG - chr7_3:48517907-48517926 Msa1107110:intron 40.0%
TACTCTTGGAAATCTGGATC+CGG - chr7_3:48518025-48518044 Msa1107110:intron 40.0%
CTTCTTTGTCAATCCTGAAC+AGG - chr7_3:48518268-48518287 Msa1107110:intron 40.0%
TTTGAATATGTTTCCGGCCT+TGG - chr7_3:48518344-48518363 Msa1107110:intron 40.0%
ACTGACCAGCTTCAGTATAT+CGG - chr7_3:48518440-48518459 Msa1107110:intron 40.0%
GAATCTCCAAGGTTTCACAA+CGG - chr7_3:48518497-48518516 Msa1107110:intron 40.0%
CACTTAGCGACAGAAATTAG+AGG - chr7_3:48518942-48518961 Msa1107110:intron 40.0%
!! TTAGCTTGTCAGTATCGGTA+GGG + chr7_3:48519092-48519111 None:intergenic 40.0%
!! ATTAGCTTGTCAGTATCGGT+AGG + chr7_3:48519093-48519112 None:intergenic 40.0%
CGATACTGACAAGCTAATGT+TGG - chr7_3:48519095-48519114 Msa1107110:CDS 40.0%
TCTGTTTCATTTCTTGCGTG+AGG - chr7_3:48519176-48519195 Msa1107110:CDS 40.0%
CGACAATGTCTATGTGTTAC+AGG - chr7_3:48519220-48519239 Msa1107110:CDS 40.0%
ATGTGTATTTCCTCCACCAT+TGG + chr7_3:48519287-48519306 None:intergenic 40.0%
TGAATCACAGCAATCTCCAA+AGG - chr7_3:48519310-48519329 Msa1107110:CDS 40.0%
AACATCGTGAAACTTGTCTG+TGG + chr7_3:48519405-48519424 None:intergenic 40.0%
ATCGCAAGCAATCAACAAGT+TGG - chr7_3:48519479-48519498 Msa1107110:CDS 40.0%
GGAGTGAGCATGATGAATAA+TGG - chr7_3:48519509-48519528 Msa1107110:CDS 40.0%
AATGGTGTATCTTTGACGCT+CGG - chr7_3:48519542-48519561 Msa1107110:CDS 40.0%
CTCGGTCTTCATCAAAATCA+TGG - chr7_3:48519560-48519579 Msa1107110:CDS 40.0%
! CAACTTTTGCGTGACTATGT+AGG - chr7_3:48519713-48519732 Msa1107110:exon 40.0%
!!! TGAGTGCTGCTGATTTTCAG+CGG - chr7_3:48516235-48516254 Msa1107110:CDS 45.0%
TCTAGGAACACGGTTCCATT+AGG - chr7_3:48516282-48516301 Msa1107110:CDS 45.0%
CTAGGAACACGGTTCCATTA+GGG - chr7_3:48516283-48516302 Msa1107110:CDS 45.0%
GTTCCATTAGGGCCATTTAC+AGG - chr7_3:48516294-48516313 Msa1107110:CDS 45.0%
!!! CTTCTGTTTTGAAGGGATCG+AGG - chr7_3:48516322-48516341 Msa1107110:CDS 45.0%
TGCTGCTGATGCATCTTTGA+TGG - chr7_3:48516416-48516435 Msa1107110:intron 45.0%
!!! CCCGACCGATATTTTGAGAT+TGG + chr7_3:48517910-48517929 None:intergenic 45.0%
TCAATCCTGAACAGGTTTGC+AGG - chr7_3:48518276-48518295 Msa1107110:intron 45.0%
ACTTGCCGATATACTGAAGC+TGG + chr7_3:48518448-48518467 None:intergenic 45.0%
TGAAGCGCGACTTGATAGAA+GGG + chr7_3:48518821-48518840 None:intergenic 45.0%
!! AACGGGTTGGTCACCAATTT+CGG - chr7_3:48518906-48518925 Msa1107110:intron 45.0%
! AACTGGTCTATCTCGTAACC+AGG - chr7_3:48519125-48519144 Msa1107110:CDS 45.0%
!! AGTAAGGCTTTGGAAGCCAA+TGG - chr7_3:48519268-48519287 Msa1107110:CDS 45.0%
AACTTGTCTGTGGAGGTAGA+TGG + chr7_3:48519395-48519414 None:intergenic 45.0%
ATCGTGAAACTTGTCTGTGG+AGG + chr7_3:48519402-48519421 None:intergenic 45.0%
GGCACTCATGTTGAAAGACT+CGG + chr7_3:48519597-48519616 None:intergenic 45.0%
CTGGAATTGAAAACCACTCG+CGG + chr7_3:48519660-48519679 None:intergenic 45.0%
CTCTCCCAAATTGCCTATTC+TGG + chr7_3:48519679-48519698 None:intergenic 45.0%
CAGCAGCACTCATCTGATTC+TGG + chr7_3:48516227-48516246 None:intergenic 50.0%
!!! GCTGCTGATTTTCAGCGGTA+TGG - chr7_3:48516240-48516259 Msa1107110:CDS 50.0%
GGAGCTATCAACTTGGGACA+TGG - chr7_3:48517327-48517346 Msa1107110:CDS 50.0%
! GTGCATATGCGTGCTACTCT+TGG - chr7_3:48518011-48518030 Msa1107110:intron 50.0%
! GCGTGCTACTCTTGGAAATC+TGG - chr7_3:48518019-48518038 Msa1107110:intron 50.0%
ATCCTGAACAGGTTTGCAGG+AGG - chr7_3:48518279-48518298 Msa1107110:intron 50.0%
TACCTCCTGCAAACCTGTTC+AGG + chr7_3:48518284-48518303 None:intergenic 50.0%
ATGGAGCCCCTTACAGTCAA+AGG - chr7_3:48518522-48518541 Msa1107110:intron 50.0%
! ACCCTGGCCTTTGACTGTAA+GGG + chr7_3:48518532-48518551 None:intergenic 50.0%
! AACCCTGGCCTTTGACTGTA+AGG + chr7_3:48518533-48518552 None:intergenic 50.0%
CTGTTTGGCGACCTCAAAGA+GGG - chr7_3:48518573-48518592 Msa1107110:intron 50.0%
AGCGTGCTGTCAGTGTTCTT+AGG - chr7_3:48518603-48518622 Msa1107110:intron 50.0%
GCGTGCTGTCAGTGTTCTTA+GGG - chr7_3:48518604-48518623 Msa1107110:intron 50.0%
CGTGCTGTCAGTGTTCTTAG+GGG - chr7_3:48518605-48518624 Msa1107110:intron 50.0%
CTGTCAGTGTTCTTAGGGGA+TGG - chr7_3:48518609-48518628 Msa1107110:intron 50.0%
CTGAAGCGCGACTTGATAGA+AGG + chr7_3:48518822-48518841 None:intergenic 50.0%
!! AAGGCTTTGGAAGCCAATGG+TGG - chr7_3:48519271-48519290 Msa1107110:CDS 50.0%
!! GGTTGGTTTGGTTTGGTCCG+TGG - chr7_3:48516840-48516859 Msa1107110:intron 55.0%
CATACGGAGCTGCGTTACCA+AGG + chr7_3:48518364-48518383 None:intergenic 55.0%
CGCAGCTCCGTATGCAAGTT+TGG - chr7_3:48518370-48518389 Msa1107110:intron 55.0%
CCATCGCCGTTGTGAAACCT+TGG + chr7_3:48518506-48518525 None:intergenic 55.0%
CCAAGGTTTCACAACGGCGA+TGG - chr7_3:48518503-48518522 Msa1107110:intron 55.0%
! CCCTGGCCTTTGACTGTAAG+GGG + chr7_3:48518531-48518550 None:intergenic 55.0%
CCCCTTACAGTCAAAGGCCA+GGG - chr7_3:48518528-48518547 Msa1107110:intron 55.0%
!! CCTCTTTGAGGTCGCCAAAC+AGG + chr7_3:48518575-48518594 None:intergenic 55.0%
CCTGTTTGGCGACCTCAAAG+AGG - chr7_3:48518572-48518591 Msa1107110:intron 55.0%
GAACACTGACAGCACGCTCA+GGG + chr7_3:48518601-48518620 None:intergenic 55.0%
AGAACACTGACAGCACGCTC+AGG + chr7_3:48518602-48518621 None:intergenic 55.0%
!! GCTTTGGAAGCCAATGGTGG+AGG - chr7_3:48519274-48519293 Msa1107110:CDS 55.0%
GCCCCTTACAGTCAAAGGCC+AGG - chr7_3:48518527-48518546 Msa1107110:intron 60.0%
!! ATGAGTGCCGCGCAGCGTTT+TGG - chr7_3:48519608-48519627 Msa1107110:CDS 60.0%
CGCAAGACCAAAACGCTGCG+CGG + chr7_3:48519618-48519637 None:intergenic 60.0%
CCACTCGCGGCGTAACTATC+AGG + chr7_3:48519647-48519666 None:intergenic 60.0%
CCTGATAGTTACGCCGCGAG+TGG - chr7_3:48519644-48519663 Msa1107110:CDS 60.0%
CGGAGCTGCGTTACCAAGGC+CGG + chr7_3:48518360-48518379 None:intergenic 65.0%
CGCTCAGGGAGCCCTCTTTG+AGG + chr7_3:48518587-48518606 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 48515746 48519891 48515746 ID=Msa1107110;Name=Msa1107110
chr7_3 mRNA 48515746 48519891 48515746 ID=Msa1107110-mRNA-1;Parent=Msa1107110;Name=Msa1107110-mRNA-1;_AED=0.04;_eAED=0.04;_QI=161|1|1|1|1|1|4|152|519
chr7_3 exon 48515746 48516395 48515746 ID=Msa1107110-mRNA-1:exon:9873;Parent=Msa1107110-mRNA-1
chr7_3 exon 48516491 48516551 48516491 ID=Msa1107110-mRNA-1:exon:9872;Parent=Msa1107110-mRNA-1
chr7_3 exon 48516983 48517347 48516983 ID=Msa1107110-mRNA-1:exon:9871;Parent=Msa1107110-mRNA-1
chr7_3 exon 48519095 48519891 48519095 ID=Msa1107110-mRNA-1:exon:9870;Parent=Msa1107110-mRNA-1
chr7_3 five_prime_UTR 48519731 48519891 48519731 ID=Msa1107110-mRNA-1:five_prime_utr;Parent=Msa1107110-mRNA-1
chr7_3 CDS 48519095 48519730 48519095 ID=Msa1107110-mRNA-1:cds;Parent=Msa1107110-mRNA-1
chr7_3 CDS 48516983 48517347 48516983 ID=Msa1107110-mRNA-1:cds;Parent=Msa1107110-mRNA-1
chr7_3 CDS 48516491 48516551 48516491 ID=Msa1107110-mRNA-1:cds;Parent=Msa1107110-mRNA-1
chr7_3 CDS 48515898 48516395 48515898 ID=Msa1107110-mRNA-1:cds;Parent=Msa1107110-mRNA-1
chr7_3 three_prime_UTR 48515746 48515897 48515746 ID=Msa1107110-mRNA-1:three_prime_utr;Parent=Msa1107110-mRNA-1
Gene Sequence

>Msa1107110

ATGGCTGATGAGGGTTTTGAAAATTATTATCATATCCCACAACAAAGCAGAAGAGAAAAACTTCGTTATTTATCTCAAAACCAAACAAGTTTCATTGAATCTTCACCCACCCTTAACCCTAACTATTCACCTTTACCTTCTCTTTACGATCCTTCACTCATTTCACCTTTAGATGCTATAAACAGTAACCCTTTTCTTTATCAAACTCCTCAAATGAATCATGTATACAACGATGGTGGTAGTAGTAGTAACAACAATGAAGTTATGTTGTTAAAATCTGAACCTTTATCTTTATCTTTATCATCAAACAAAAACAACCAGAATCAGATGAGTGCTGCTGATTTTCAGCGGTATGGTTCTGTTGTTGATCATGTTTCTAGGAACACGGTTCCATTAGGGCCATTTACAGGTTATGCTTCTGTTTTGAAGGGATCGAGGTTTTTGAAACCTGCACAACAATTATTGGATGAGATATGTGATGTTGGTGTTCGTGCTGAGAAGATTATTGCTGCTGCTGATGCATCTTTGATGGAAACTAATCATGGTAACAGTGGAATGATTAATGGTGTTGATGATGATACACTTGGTGATGATGGAAGGAAGAACAAGTCTAGATTATTAACAGTGCTTGATGAGGTTTGCAGGAGGTACAGACAGTACTATCAGCAGATTCATGCAGTAATAACTTCATTTGAATATGTTTCCGGCCTTGGTAACGCAGCTCCGTATGCAAGTTTGGCTATAAATGCCATGTCCAAACATTTTAGATTCTTGAAAAATGTGATTACTGACCAGCTTCAGTATATCGGCAAGTCTAATTATCAGATAAGCAATAGAAAGGATGAATCTCCAAGGTTTCACAACGGCGATGGAGCCCCTTACAGTCAAAGGCCAGGGTTTATAGAACATGTTCAACAACCTGTTTGGCGACCTCAAAGAGGGCTCCCTGAGCGTGCTGTCAGTGTTCTTAGGGGATGGTTGTTTGAACACTTTTTGCATCCTTACCCTACCGATACTGACAAGCTAATGTTGGCTAAACAAACTGGTCTATCTCGTAACCAGGTGTCTAATTGGTTTATAAATGCAAGAGTAAGGCTTTGGAAGCCAATGGTGGAGGAAATACACATGCTTGAATCACAGCAATCTCCAAAGGAATCACAAAGAGATGAACATAGTCGAAACAATTTATGCGAGAACAACATTGCTGAGAATCCATCTACCTCCACAGACAAGTTTCACGATGTTGCATATAAACGTACTAGAAACGAACTTCACAACATGTCAGTGCCGAATCATAGTATCGCAAGCAATCAACAAGTTGGTAATGTTGGAGTGAGCATGATGAATAATGGTGCAACAAGCAATGGTGTATCTTTGACGCTCGGTCTTCATCAAAATCATGGAATTGGGTTATCCGAGTCTTTCAACATGAGTGCCGCGCAGCGTTTTGGTCTTGCGCATCAACCTGATAGTTACGCCGCGAGTGGTTTTCAATTCCAGAATAGGCAATTTGGGAGAGATTTTATTGGTGGGCAACTTTTGCGTGACTATGTAGGATGA

Protein sequence

>Msa1107110

MADEGFENYYHIPQQSRREKLRYLSQNQTSFIESSPTLNPNYSPLPSLYDPSLISPLDAINSNPFLYQTPQMNHVYNDGGSSSNNNEVMLLKSEPLSLSLSSNKNNQNQMSAADFQRYGSVVDHVSRNTVPLGPFTGYASVLKGSRFLKPAQQLLDEICDVGVRAEKIIAAADASLMETNHGNSGMINGVDDDTLGDDGRKNKSRLLTVLDEVCRRYRQYYQQIHAVITSFEYVSGLGNAAPYASLAINAMSKHFRFLKNVITDQLQYIGKSNYQISNRKDESPRFHNGDGAPYSQRPGFIEHVQQPVWRPQRGLPERAVSVLRGWLFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPMVEEIHMLESQQSPKESQRDEHSRNNLCENNIAENPSTSTDKFHDVAYKRTRNELHNMSVPNHSIASNQQVGNVGVSMMNNGATSNGVSLTLGLHQNHGIGLSESFNMSAAQRFGLAHQPDSYAASGFQFQNRQFGRDFIGGQLLRDYVG*