AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1108060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1108060 MtrunA17_Chr7g0241651 91.555 746 49 3 15 751 15 755 0.0 1326
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1108060 AT2G38040.1 60.569 738 257 11 1 719 4 726 0.0 874
Msa1108060 AT2G38040.2 60.569 738 257 11 1 719 4 726 0.0 874

Find 202 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATTCTTTGATTCCGAATT+TGG 0.097093 7_3:+50632214 None:intergenic
CCTGCTATTGTTACTGGTTT+AGG 0.157647 7_3:-50635463 Msa1108060:CDS
CTTTAGTATTTCTACCCTTT+TGG 0.213712 7_3:+50635404 None:intergenic
CTGCTATTGTTACTGGTTTA+GGG 0.223138 7_3:-50635462 Msa1108060:CDS
GATGATCCTGCTATTGTTAC+TGG 0.229959 7_3:-50635469 Msa1108060:CDS
GAAGCCAAAGCCGGTCATTT+TGG 0.247758 7_3:-50636595 Msa1108060:CDS
TCTTCTTCTGCAACCCTTGC+TGG 0.255629 7_3:-50636846 Msa1108060:CDS
AGGAGTGTGGTTAGGAAATA+TGG 0.261294 7_3:-50636871 Msa1108060:exon
CCAGTTATTTCTATAGTTAT+TGG 0.269049 7_3:-50634463 Msa1108060:CDS
CAGTTATTTCTATAGTTATT+GGG 0.280842 7_3:-50634462 Msa1108060:CDS
ACTAAACAAGGATGTGAAAA+AGG 0.281837 7_3:-50632323 Msa1108060:CDS
AACTCAAAACAAATACAAAA+TGG 0.293574 7_3:+50631274 None:intergenic
CGAAAAGCCTCTTGTTGATC+TGG 0.302936 7_3:-50636568 Msa1108060:CDS
CAGTGATCAGATTCGCTCAT+TGG 0.305709 7_3:-50636347 Msa1108060:CDS
CGCATCCTCAGCAAGCGATT+TGG 0.313461 7_3:-50632491 Msa1108060:CDS
CCATTCAGCAATGGATCAAT+AGG 0.322029 7_3:+50632757 None:intergenic
AACCTTGATCCCAATGTTAA+AGG 0.325787 7_3:-50636660 Msa1108060:CDS
ACGAGATGGCAACGGGCTTT+TGG 0.338656 7_3:-50632362 Msa1108060:CDS
AAATCCAAAATGACCGGCTT+TGG 0.343249 7_3:+50636591 None:intergenic
GAAAGTATAAAGCGTAACTT+TGG 0.347984 7_3:-50635382 Msa1108060:CDS
TTCATTCCTTCACACACATT+TGG 0.360960 7_3:-50638374 Msa1108060:five_prime_UTR
TCAAGGAAAGTTGGCCTGTT+AGG 0.363340 7_3:+50635684 None:intergenic
AAAGAAACTGGAAGAGAAAC+TGG 0.369228 7_3:-50632887 Msa1108060:CDS
TTCTTCAGCTTGTTAGCATT+AGG 0.371644 7_3:+50632685 None:intergenic
CATGAATAATCCTAGAATAA+AGG 0.371751 7_3:-50632554 Msa1108060:CDS
CCCCAGAGGTTTCAGACATC+AGG 0.379604 7_3:+50632110 None:intergenic
GAAAATCATTGCGTTCAATA+AGG 0.380574 7_3:-50632452 Msa1108060:CDS
CGGAAGATGGCAGAGGAAAC+TGG 0.382674 7_3:-50636379 Msa1108060:CDS
GAGAGAGTTGTTAATATTGT+TGG 0.382743 7_3:+50638302 None:intergenic
CACCTTTAACATTGGGATCA+AGG 0.383060 7_3:+50636658 None:intergenic
CAATAAGGAGGTAGACTTGC+AGG 0.384155 7_3:-50632437 Msa1108060:CDS
ATTTGGTGTCCCTCCAGCTT+TGG 0.385342 7_3:+50632231 None:intergenic
GTGTTGTTGAAATAATTATA+AGG 0.387323 7_3:+50638237 None:intergenic
GTGAAGGAATGAATAGTTAG+AGG 0.388563 7_3:+50638384 None:intergenic
GGTAGGACCTACATGTTTAT+AGG 0.394998 7_3:-50635430 Msa1108060:CDS
CCAATAACTATAGAAATAAC+TGG 0.397560 7_3:+50634463 None:intergenic
GAGATGAATGAATGAGAGAT+TGG 0.401192 7_3:+50638332 None:intergenic
GATGGCAGAGGAAACTGGTT+TGG 0.413460 7_3:-50636374 Msa1108060:CDS
GAGTTTGAAGGAGTGTGGTT+AGG 0.414173 7_3:-50636879 Msa1108060:five_prime_UTR
CATAATTTGAGATCCATGTT+TGG 0.415282 7_3:-50634496 Msa1108060:CDS
AGATGAGGCGATAAAGAAAC+TGG 0.418414 7_3:-50632899 Msa1108060:CDS
ACTGGTTTAGGGAGTATAGA+TGG 0.423701 7_3:-50635451 Msa1108060:CDS
AGCTGGAGGGACACCAAATT+CGG 0.428121 7_3:-50632227 Msa1108060:CDS
GGTTAAGTTCCTCAGATTTG+AGG 0.430996 7_3:+50634627 None:intergenic
GTTATTGGGGAAGGTGGATC+TGG 0.432236 7_3:-50634448 Msa1108060:CDS
GTCTGAGGCCGCTAAAGCAT+TGG 0.441183 7_3:-50632842 Msa1108060:CDS
CAACACCCCACCTTTAACAT+TGG 0.442532 7_3:+50636650 None:intergenic
TTGAGAACCTTGGGAAGGAC+AGG 0.442756 7_3:-50636768 Msa1108060:CDS
AAAGTGGAGGTCGCCAAAGC+TGG 0.442807 7_3:-50632244 Msa1108060:CDS
GGTGTCCCTTTGAGAACCTT+GGG 0.443297 7_3:-50636777 Msa1108060:CDS
GCATTGCACGACATCCTAAC+AGG 0.443350 7_3:-50635698 Msa1108060:CDS
GCAATGCTGACCCTCTGTAT+AGG 0.444927 7_3:+50635714 None:intergenic
TCTGGTGGTGCCCTTGCCAT+TGG 0.444951 7_3:-50634430 Msa1108060:CDS
TCTGAGGCCGCTAAAGCATT+GGG 0.445067 7_3:-50632841 Msa1108060:CDS
AAGATTGCAGCACACGCCTC+TGG 0.445070 7_3:+50633751 None:intergenic
GTTAATGTTGTGAAGTCGGT+TGG 0.448137 7_3:-50632412 Msa1108060:CDS
TGTTAAGCCCAATGCTTTAG+CGG 0.448616 7_3:+50632834 None:intergenic
GCCTCATCTAAATCGAGTTT+CGG 0.448664 7_3:+50632913 None:intergenic
AGTTCGACTGGCGGTTTCAC+TGG 0.456175 7_3:-50636798 Msa1108060:CDS
TTCTCTTTGAGTGGCTTGAA+AGG 0.456237 7_3:+50636615 None:intergenic
AACACCCCACCTTTAACATT+GGG 0.457049 7_3:+50636651 None:intergenic
ACCTGATGTCTGAAACCTCT+GGG 0.457541 7_3:-50632111 Msa1108060:CDS
ATCTGTTGAGAGGTCCAACT+TGG 0.458156 7_3:+50633272 None:intergenic
AGATGAATGAATGAGAGATT+GGG 0.461617 7_3:+50638333 None:intergenic
AACCAGGACGAGATGGCAAC+GGG 0.467150 7_3:-50632369 Msa1108060:CDS
GTTGAACTCACATTAAGAAA+AGG 0.472332 7_3:+50632018 None:intergenic
GTACAAGTGGCTGAAGATAT+TGG 0.474915 7_3:+50631425 None:intergenic
GTAAGTTTGAAAGTAGGAAA+TGG 0.475700 7_3:-50632085 Msa1108060:CDS
GTGTCAATGAAAGTAACTAC+TGG 0.476868 7_3:+50634668 None:intergenic
TTGGATCTCTACTCAATCAC+TGG 0.479855 7_3:-50638181 Msa1108060:intron
AAGAAAGAGTATCCATGGTC+TGG 0.483621 7_3:-50636684 Msa1108060:CDS
AACCTGATGTCTGAAACCTC+TGG 0.484029 7_3:-50632112 Msa1108060:CDS
CATCTTTAACATAACTGATA+AGG 0.485279 7_3:-50635658 Msa1108060:intron
GTTACTTTCATTGACACCCC+TGG 0.490262 7_3:-50634662 Msa1108060:CDS
TCAGAATCAGAAACTTTCTC+AGG 0.495099 7_3:+50632994 None:intergenic
AATGATGGAGCAATTGAAAG+TGG 0.495125 7_3:-50632260 Msa1108060:CDS
TTACTTTCATTGACACCCCT+GGG 0.498078 7_3:-50634661 Msa1108060:CDS
GGCTTTGGCTTCTCTTTGAG+TGG 0.498440 7_3:+50636606 None:intergenic
CATGTTTATAGGCCACCAAA+AGG 0.499286 7_3:-50635419 Msa1108060:CDS
AAGATGTGATCAAGGAAAGT+TGG 0.499589 7_3:+50635675 None:intergenic
CAGAGCCTTGCAGAGGCCGT+AGG 0.500417 7_3:-50632163 Msa1108060:CDS
ATTGGAGAATAAGTACCAAA+AGG 0.500470 7_3:-50636329 Msa1108060:intron
GAAATGTATGGCCATGATGC+TGG 0.502340 7_3:+50631397 None:intergenic
AATTAAAATCAATGAAGCTA+TGG 0.503820 7_3:-50633246 Msa1108060:CDS
TCTATAGTTATTGGGGAAGG+TGG 0.505891 7_3:-50634454 Msa1108060:CDS
AAAGTATAAAGCGTAACTTT+GGG 0.506447 7_3:-50635381 Msa1108060:CDS
TTGAGAACAGGTTCGGAAGA+TGG 0.510369 7_3:-50636392 Msa1108060:intron
TTGTTTAGTTCTTCTATCTG+AGG 0.510370 7_3:+50632337 None:intergenic
TGGTGTCCCTTTGAGAACCT+TGG 0.511170 7_3:-50636778 Msa1108060:CDS
AGCCCGTTGCCATCTCGTCC+TGG 0.511791 7_3:+50632367 None:intergenic
GGTTTGAGTTTGAAGGAGTG+TGG 0.512150 7_3:-50636884 Msa1108060:five_prime_UTR
GAGATCCATGTTTGGTCTGA+AGG 0.512636 7_3:-50634488 Msa1108060:CDS
CCTATTGATCCATTGCTGAA+TGG 0.516317 7_3:-50632757 Msa1108060:CDS
TCATGTGGAGTTGGTGAAGA+TGG 0.522794 7_3:-50631495 Msa1108060:three_prime_UTR
CTGCTGCTTCTGATCTTCTG+AGG 0.528168 7_3:-50636821 Msa1108060:CDS
TCCTTCCCAAGGTTCTCAAA+GGG 0.530202 7_3:+50636772 None:intergenic
GTCCTTCCCAAGGTTCTCAA+AGG 0.530876 7_3:+50636771 None:intergenic
TTATGTTAAAGATGTGATCA+AGG 0.532154 7_3:+50635667 None:intergenic
CCTAAACCAGTAACAATAGC+AGG 0.532918 7_3:+50635463 None:intergenic
TAGAATAAAGGAAAACTATG+AGG 0.534393 7_3:-50632542 Msa1108060:CDS
AACAGATATTAAGAGAATGA+TGG 0.535873 7_3:-50632275 Msa1108060:CDS
TTGGTGGCCTATAAACATGT+AGG 0.538172 7_3:+50635423 None:intergenic
TAGGAAAGCTCTACGCATGA+TGG 0.538333 7_3:-50634714 Msa1108060:CDS
TTAATGTTGTGAAGTCGGTT+GGG 0.540162 7_3:-50632411 Msa1108060:CDS
TTGAGGTCAGCATATGCCCC+AGG 0.543733 7_3:+50634644 None:intergenic
CAGTTGTTGCGTAAGTGTTG+CGG 0.544001 7_3:+50632597 None:intergenic
AGAGGGCGATACTTCTTATG+TGG 0.545448 7_3:+50638402 None:intergenic
TGGCACCTTCAGACCAAACA+TGG 0.545741 7_3:+50634483 None:intergenic
ATCAGCATGTGCACCACCGA+GGG 0.548379 7_3:+50633295 None:intergenic
TGAAGAAGAAAGAGTATCCA+TGG 0.548999 7_3:-50636689 Msa1108060:CDS
GGGGATGTAAGTTTGAAAGT+AGG 0.551350 7_3:-50632091 Msa1108060:CDS
ATGGAATATGCAGATCATCA+TGG 0.552837 7_3:-50634695 Msa1108060:CDS
TGGACATACCCATGTGGAGT+TGG 0.554403 7_3:+50635355 None:intergenic
TTGCAGTTTATGGAACTCCA+TGG 0.555261 7_3:-50635508 Msa1108060:intron
AACCTTGGGAAGGACAGGGC+TGG 0.556563 7_3:-50636763 Msa1108060:CDS
ATTGGGGAAGGTGGATCTGG+TGG 0.559129 7_3:-50634445 Msa1108060:CDS
GATCTTCTGAGGAGTTCGAC+TGG 0.560887 7_3:-50636810 Msa1108060:CDS
ATTTCTATAGTTATTGGGGA+AGG 0.562173 7_3:-50634457 Msa1108060:CDS
TTCGTAGAGATCGTCAATGA+AGG 0.565853 7_3:+50638269 None:intergenic
TATTAGCGCATCCAATGGCA+AGG 0.566745 7_3:+50634419 None:intergenic
TTGATCCCAATGTTAAAGGT+GGG 0.568886 7_3:-50636656 Msa1108060:CDS
AGAAGCAGCAGAACCAGCAA+GGG 0.570441 7_3:+50636833 None:intergenic
CAGAAGCAGCAGAACCAGCA+AGG 0.570891 7_3:+50636832 None:intergenic
AGTTATTTCTATAGTTATTG+GGG 0.571294 7_3:-50634461 Msa1108060:CDS
TGCAAATTGAAAGTTGCAGA+TGG 0.571774 7_3:-50633582 Msa1108060:CDS
GAGTTCTAAAGCTGCTCCCA+AGG 0.573415 7_3:-50633722 Msa1108060:intron
ATGCAGTGTTCTATGTTGCC+AGG 0.573587 7_3:-50634378 Msa1108060:intron
AACTGGAAGAGAAACTGGAA+AGG 0.576046 7_3:-50632882 Msa1108060:CDS
CTTGATCCCAATGTTAAAGG+TGG 0.579720 7_3:-50636657 Msa1108060:CDS
TCTATCTTACCATTCAGCAA+TGG 0.580411 7_3:+50632748 None:intergenic
GTGGAGGTCGCCAAAGCTGG+AGG 0.581724 7_3:-50632241 Msa1108060:CDS
TATATCAGCCACACTTCGCA+TGG 0.583957 7_3:+50631339 None:intergenic
GAATGCTGCTCATGTGGAGT+TGG 0.585199 7_3:-50631504 Msa1108060:three_prime_UTR
TTGTACATCATCCAGCATCA+TGG 0.585215 7_3:-50631408 Msa1108060:three_prime_UTR
ACTCAAAGAGAAGCCAAAGC+CGG 0.586838 7_3:-50636604 Msa1108060:CDS
GATGAATGAATGAGAGATTG+GGG 0.586906 7_3:+50638334 None:intergenic
TTAGTAAAACCAGGACGAGA+TGG 0.587670 7_3:-50632376 Msa1108060:CDS
TTTGGGATGCCAACTCCACA+TGG 0.588251 7_3:-50635364 Msa1108060:CDS
GTCAGAGAATGCTGCTCATG+TGG 0.589684 7_3:-50631510 Msa1108060:intron
TCAGCAATGGATCAATAGGT+TGG 0.591042 7_3:+50632761 None:intergenic
CTTCTGAGGAGTTCGACTGG+CGG 0.591267 7_3:-50636807 Msa1108060:CDS
AGGCGTGTGCTGCAATCTTG+TGG 0.591336 7_3:-50633747 Msa1108060:CDS
TGTTACTGCTAAGTTGAGGA+AGG 0.592738 7_3:-50636712 Msa1108060:CDS
GAATCAGAAACTTTCTCAGG+AGG 0.593450 7_3:+50632997 None:intergenic
ATGTTTATAGGCCACCAAAA+GGG 0.597100 7_3:-50635418 Msa1108060:CDS
AACCAGCCCTGTCCTTCCCA+AGG 0.598935 7_3:+50636761 None:intergenic
AAACCAGGACGAGATGGCAA+CGG 0.599480 7_3:-50632370 Msa1108060:CDS
TCCCTTTGAGAACCTTGGGA+AGG 0.600292 7_3:-50636773 Msa1108060:CDS
GGTGGTTAATGTTGTGAAGT+CGG 0.601364 7_3:-50632416 Msa1108060:CDS
TGAGAACCTTGGGAAGGACA+GGG 0.604097 7_3:-50636767 Msa1108060:CDS
TTTCAAACTAGAAGAGCCTA+CGG 0.606963 7_3:+50632147 None:intergenic
TGTCAATGAAAGTAACTACT+GGG 0.607100 7_3:+50634669 None:intergenic
AAAATCGGTGGGTTCAAGGA+AGG 0.607904 7_3:-50633069 Msa1108060:CDS
TGAGGTCAGCATATGCCCCA+GGG 0.609072 7_3:+50634645 None:intergenic
ACAGGTTCGGAAGATGGCAG+AGG 0.609168 7_3:-50636386 Msa1108060:intron
TAATTTATTAGCGCATCCAA+TGG 0.611684 7_3:+50634414 None:intergenic
ATCATCCAAATCGCTTGCTG+AGG 0.612600 7_3:+50632486 None:intergenic
TGATCCCAATGTTAAAGGTG+GGG 0.614480 7_3:-50636655 Msa1108060:CDS
TGAAGGAATGAATAGTTAGA+GGG 0.616679 7_3:+50638385 None:intergenic
ACTGGAAGAGAAACTGGAAA+GGG 0.617331 7_3:-50632881 Msa1108060:CDS
AACAAGCTGAAGAAGAAGCA+TGG 0.620631 7_3:-50632676 Msa1108060:CDS
GAACTCCATGGTGATCGAGA+AGG 0.624613 7_3:-50635496 Msa1108060:CDS
TGGAGGTCGCCAAAGCTGGA+GGG 0.627204 7_3:-50632240 Msa1108060:CDS
ACATCTAACTCCTATACAGA+GGG 0.627693 7_3:-50635724 Msa1108060:CDS
GTGCACATGCTGATCCAAGT+TGG 0.629050 7_3:-50633286 Msa1108060:CDS
GATGTTCAGTTAGTAAAACC+AGG 0.630796 7_3:-50632385 Msa1108060:CDS
TTCCAATAGGAGCCCCTCGG+TGG 0.630832 7_3:-50633308 Msa1108060:intron
ATTAGCGCATCCAATGGCAA+GGG 0.632392 7_3:+50634420 None:intergenic
AAGAGCCTACGGCCTCTGCA+AGG 0.633658 7_3:+50632158 None:intergenic
GTTTAGGGAGTATAGATGGT+AGG 0.635023 7_3:-50635447 Msa1108060:CDS
AAGATAATAACATGATGTTG+TGG 0.637488 7_3:-50631121 Msa1108060:three_prime_UTR
GGATCAAGGTTACCAGACCA+TGG 0.639384 7_3:+50636672 None:intergenic
AATCATTGCGTTCAATAAGG+AGG 0.642813 7_3:-50632449 Msa1108060:CDS
TCTTCTGTCAGACAGAAACA+AGG 0.643125 7_3:-50632623 Msa1108060:CDS
TCATCTAAATCGAGTTTCGG+AGG 0.646059 7_3:+50632916 None:intergenic
TATTACGTGATTTAGTCCAG+AGG 0.647057 7_3:-50633767 Msa1108060:intron
ATATGCTGACCTCAAATCTG+AGG 0.648116 7_3:-50634636 Msa1108060:CDS
ATGAGATACCATGCGAAGTG+TGG 0.649672 7_3:-50631347 Msa1108060:three_prime_UTR
TCCGAAACTCGATTTAGATG+AGG 0.652577 7_3:-50632914 Msa1108060:CDS
GAGTTTCGGAGGCTCAGAAG+AGG 0.652851 7_3:+50632927 None:intergenic
GGAAGAGAAACTGGAAAGGG+AGG 0.655471 7_3:-50632878 Msa1108060:CDS
GACGAGTTGAGAGAGAAAGT+TGG 0.658637 7_3:-50632052 Msa1108060:CDS
AATAAAGCAGAGCCTTGCAG+AGG 0.662404 7_3:-50632170 Msa1108060:CDS
GGTGAAGATGGTGCTGACAG+TGG 0.662968 7_3:-50631483 Msa1108060:three_prime_UTR
CATAACCTTCTCGATCACCA+TGG 0.668344 7_3:+50635491 None:intergenic
TTAGTGTTACTGCTAAGTTG+AGG 0.669331 7_3:-50636716 Msa1108060:CDS
TCAGATAGAAGAACTAAACA+AGG 0.670049 7_3:-50632335 Msa1108060:CDS
GATCAGCATGTGCACCACCG+AGG 0.670304 7_3:+50633294 None:intergenic
CACATCTAACTCCTATACAG+AGG 0.673529 7_3:-50635725 Msa1108060:CDS
GTAGCAAGTATTGTTGTGGT+GGG 0.675237 7_3:-50638503 None:intergenic
TTGGGATGCCAACTCCACAT+GGG 0.681170 7_3:-50635363 Msa1108060:intron
GATGCTGGATGATGTACAAG+TGG 0.683716 7_3:+50631412 None:intergenic
TCAGCATGTGCACCACCGAG+GGG 0.685493 7_3:+50633296 None:intergenic
TACTTTCATTGACACCCCTG+GGG 0.686879 7_3:-50634660 Msa1108060:CDS
GGTTGATCAAGAATTGTCTG+AGG 0.689586 7_3:-50632857 Msa1108060:CDS
TTTCAAACTTACATCCCCAG+AGG 0.692038 7_3:+50632096 None:intergenic
GATGGAGCAATTGAAAGTGG+AGG 0.703918 7_3:-50632257 Msa1108060:CDS
GAGGTCAGCATATGCCCCAG+GGG 0.708544 7_3:+50634646 None:intergenic
TAAGGAGGTAGACTTGCAGG+TGG 0.724305 7_3:-50632434 Msa1108060:CDS
CCTGATGTCTGAAACCTCTG+GGG 0.731070 7_3:-50632110 Msa1108060:CDS
TTCTAGTGGACATACCCATG+TGG 0.731314 7_3:+50635349 None:intergenic
TCTGTCAGACAGAAACAAGG+AGG 0.753606 7_3:-50632620 Msa1108060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATTAGTTTATTTTTCT+TGG - chr7_3:50632593-50632612 Msa1108060:CDS 10.0%
!!! TAATTGTAATGTTTTTTTAA+TGG - chr7_3:50633127-50633146 Msa1108060:CDS 10.0%
!! TCGATTATATATTAAAAAAA+AGG + chr7_3:50634599-50634618 None:intergenic 10.0%
!! ATAATTAATAAGATTATTAC+AGG + chr7_3:50635993-50636012 None:intergenic 10.0%
!!! TTTTTATTTTTTTTTCCAAT+AGG - chr7_3:50636221-50636240 Msa1108060:intron 10.0%
!! AAAATATTATTAAGAGATAA+AGG + chr7_3:50637995-50638014 None:intergenic 10.0%
!! ATATAGTAATTGGATAAAAA+GGG + chr7_3:50631406-50631425 None:intergenic 15.0%
!! ATTAAGCTTAATTAAGTTAA+TGG - chr7_3:50631585-50631604 Msa1108060:intron 15.0%
!! TTAAGCTTAATTAAGTTAAT+GGG - chr7_3:50631586-50631605 Msa1108060:intron 15.0%
!! ATTAAGCTTAATTAAGTTAT+TGG - chr7_3:50631861-50631880 Msa1108060:intron 15.0%
!! TTAAGCTTAATTAAGTTATT+GGG - chr7_3:50631862-50631881 Msa1108060:intron 15.0%
!! TTATAAATATAATTAGTTGC+TGG - chr7_3:50632085-50632104 Msa1108060:CDS 15.0%
!! TTTGATATATAATTAGATAC+TGG - chr7_3:50632171-50632190 Msa1108060:CDS 15.0%
!! TATGATATATAATTAGATAC+TGG - chr7_3:50632502-50632521 Msa1108060:CDS 15.0%
!!! TTTATAGATTTTGGTAATTT+GGG - chr7_3:50632635-50632654 Msa1108060:CDS 15.0%
!! AAAAGTGACTAAAATATATT+AGG - chr7_3:50633519-50633538 Msa1108060:intron 15.0%
!! AAAGTGACTAAAATATATTA+GGG - chr7_3:50633520-50633539 Msa1108060:intron 15.0%
!! ATTAGTATACGTAAAATAAA+AGG - chr7_3:50633648-50633667 Msa1108060:intron 15.0%
!! TAATAGTTATTCATATTTCA+TGG - chr7_3:50633675-50633694 Msa1108060:intron 15.0%
!!! TTGCATTCTTATATTTTAAT+TGG - chr7_3:50633959-50633978 Msa1108060:intron 15.0%
!! ATTATAAAACTTGAAAATGA+TGG + chr7_3:50635207-50635226 None:intergenic 15.0%
!! TATATACATATATATACCTT+GGG + chr7_3:50635839-50635858 None:intergenic 15.0%
!! TATATATGTATATACAAAAC+TGG - chr7_3:50635845-50635864 Msa1108060:intron 15.0%
!!! ATTATTTATTTTATCTTTGC+AGG - chr7_3:50635902-50635921 Msa1108060:intron 15.0%
!! ACATACGAAAAAAAAAATTA+CGG + chr7_3:50636025-50636044 None:intergenic 15.0%
!! TGATAATTTATATCAAACTT+TGG - chr7_3:50636377-50636396 Msa1108060:CDS 15.0%
!!! TATCTCTTAATAATATTTTG+TGG - chr7_3:50637996-50638015 Msa1108060:intron 15.0%
!!! GTATTTTTCAAAAATAAGTA+GGG + chr7_3:50638478-50638497 None:intergenic 15.0%
!!! AGTATTTTTCAAAAATAAGT+AGG + chr7_3:50638479-50638498 None:intergenic 15.0%
!!! GTGTTGTTGAAATAATTATA+AGG + chr7_3:50631308-50631327 None:intergenic 20.0%
!! GATATAGTAATTGGATAAAA+AGG + chr7_3:50631407-50631426 None:intergenic 20.0%
!! AATGAACATGATATAGTAAT+TGG + chr7_3:50631416-50631435 None:intergenic 20.0%
!! AAAACCCAAAATCAAAAAAT+GGG + chr7_3:50631527-50631546 None:intergenic 20.0%
!! AAAAACCCAAAATCAAAAAA+TGG + chr7_3:50631528-50631547 None:intergenic 20.0%
!!! CTAGTTAAAAGTTTTGTTTT+TGG - chr7_3:50631609-50631628 Msa1108060:intron 20.0%
!! TAAGCTTAATTAAGTTATTG+GGG - chr7_3:50631863-50631882 Msa1108060:intron 20.0%
!!! GGTTTTTAAAGTTTACTTTT+TGG - chr7_3:50631884-50631903 Msa1108060:intron 20.0%
!!! TTTTTTTGTCACTCTTTTTT+AGG - chr7_3:50631929-50631948 Msa1108060:intron 20.0%
!!! TCATTTTCTTAATGAAGTAA+TGG - chr7_3:50631982-50632001 Msa1108060:intron 20.0%
!!! TAACTTTTTTTGTGAAAACT+CGG + chr7_3:50632471-50632490 None:intergenic 20.0%
!! AATTACCAAAATCTATAAAC+AGG + chr7_3:50632634-50632653 None:intergenic 20.0%
!!! GTTTATAGATTTTGGTAATT+TGG - chr7_3:50632634-50632653 Msa1108060:CDS 20.0%
!!! TTATAGATTTTGGTAATTTG+GGG - chr7_3:50632636-50632655 Msa1108060:CDS 20.0%
!!! GTATAAGAGTATATTTTTCA+AGG - chr7_3:50633098-50633117 Msa1108060:CDS 20.0%
!! AATTTGATTACTTGAATGAT+AGG - chr7_3:50633273-50633292 Msa1108060:CDS 20.0%
!!! CTTTTATCAATTTAAGCAAT+TGG - chr7_3:50633450-50633469 Msa1108060:intron 20.0%
!!! TTTTACGTATACTAATTGTA+AGG + chr7_3:50633644-50633663 None:intergenic 20.0%
!! AAATAAAGAAAGTAACATAG+TGG + chr7_3:50634632-50634651 None:intergenic 20.0%
!!! TTTTCAAATCAAACAGTTAT+AGG - chr7_3:50634809-50634828 Msa1108060:intron 20.0%
!!! GTTATGCTTTATTTATACTT+AGG - chr7_3:50634951-50634970 Msa1108060:intron 20.0%
!!! CAGTTATTTCTATAGTTATT+GGG - chr7_3:50635080-50635099 Msa1108060:intron 20.0%
!!! AGTTATTTCTATAGTTATTG+GGG - chr7_3:50635081-50635100 Msa1108060:intron 20.0%
!!! TTTTCTTTGCAAATTATATG+TGG - chr7_3:50635322-50635341 Msa1108060:intron 20.0%
!!! ACAAAACTACGAAATTTTTT+GGG + chr7_3:50635505-50635524 None:intergenic 20.0%
!!! TACAAAACTACGAAATTTTT+TGG + chr7_3:50635506-50635525 None:intergenic 20.0%
!!! ATTTTTCCTCATTTACTAAT+TGG - chr7_3:50635713-50635732 Msa1108060:CDS 20.0%
!!! TTTTTCCTCATTTACTAATT+GGG - chr7_3:50635714-50635733 Msa1108060:CDS 20.0%
!! CTAAATCACGTAATAAATAA+AGG + chr7_3:50635770-50635789 None:intergenic 20.0%
!! GTATATACATATATATACCT+TGG + chr7_3:50635840-50635859 None:intergenic 20.0%
!! CATACGAAAAAAAAAATTAC+GGG + chr7_3:50636024-50636043 None:intergenic 20.0%
!!! TAAACCTTTTAATGTCTATT+TGG - chr7_3:50636069-50636088 Msa1108060:intron 20.0%
!!! TTTAATTTTTATCTGTTGAG+AGG + chr7_3:50636283-50636302 None:intergenic 20.0%
!! AATTAAAATCAATGAAGCTA+TGG - chr7_3:50636296-50636315 Msa1108060:intron 20.0%
!!! TTCATGTTTCTTTTTTTCTT+GGG + chr7_3:50636512-50636531 None:intergenic 20.0%
!!! AACTATCTTACAAATGTTTT+TGG + chr7_3:50637880-50637899 None:intergenic 20.0%
!!! GTTTTAATGTAGTATGATAT+TGG - chr7_3:50637897-50637916 Msa1108060:intron 20.0%
!! ATTAAGAGATAAAGGTTTAA+AGG + chr7_3:50637987-50638006 None:intergenic 20.0%
!! AACTCAAAACAAATACAAAA+TGG + chr7_3:50638271-50638290 None:intergenic 20.0%
!!! AACATGTTTCATTGTTGTTT+AGG - chr7_3:50631451-50631470 Msa1108060:three_prime_UTR 25.0%
!!! AATGACCCATTTTTTGATTT+TGG - chr7_3:50631519-50631538 Msa1108060:intron 25.0%
!!! ATGACCCATTTTTTGATTTT+GGG - chr7_3:50631520-50631539 Msa1108060:intron 25.0%
!!! TGTTTTTTAGTATTGCTTTC+TGG - chr7_3:50631666-50631685 Msa1108060:intron 25.0%
!!! GTTTTTTAGTATTGCTTTCT+GGG - chr7_3:50631667-50631686 Msa1108060:intron 25.0%
!!! TTTATGAGTTGATGAATCAA+TGG - chr7_3:50631777-50631796 Msa1108060:intron 25.0%
!! TTTGTCCTGTTTATAGATTT+TGG - chr7_3:50632626-50632645 Msa1108060:CDS 25.0%
!!! TATAGATTTTGGTAATTTGG+GGG - chr7_3:50632637-50632656 Msa1108060:CDS 25.0%
! TACTTAAGTGAGAATGAATT+AGG - chr7_3:50633076-50633095 Msa1108060:CDS 25.0%
!!! TTTTTTTAATGGTTGAGAAC+AGG - chr7_3:50633138-50633157 Msa1108060:intron 25.0%
! ATAACGATTAAATGTTATCC+CGG - chr7_3:50633246-50633265 Msa1108060:CDS 25.0%
!! TCAAGTAATCAAATTTTCTC+CGG + chr7_3:50633268-50633287 None:intergenic 25.0%
! TGTATCAATCTTTGATATTG+CGG - chr7_3:50633369-50633388 Msa1108060:intron 25.0%
! AAGCAATTGGATATACTTTA+TGG - chr7_3:50633463-50633482 Msa1108060:intron 25.0%
! TTATGTTAAAGATGTGATCA+AGG + chr7_3:50633878-50633897 None:intergenic 25.0%
! CATCTTTAACATAACTGATA+AGG - chr7_3:50633884-50633903 Msa1108060:intron 25.0%
! AAAGATGAGAATTCTATTAG+AGG + chr7_3:50634006-50634025 None:intergenic 25.0%
! AAAGTATAAAGCGTAACTTT+GGG - chr7_3:50634161-50634180 Msa1108060:intron 25.0%
! AGTATCAATTAGAATTCTAG+TGG + chr7_3:50634210-50634229 None:intergenic 25.0%
!!! AGTAATAATTATTGACTCCT+CGG + chr7_3:50634480-50634499 None:intergenic 25.0%
! TAGTGCGTACAAATAAAAAA+GGG + chr7_3:50634567-50634586 None:intergenic 25.0%
! ATAGTGCGTACAAATAAAAA+AGG + chr7_3:50634568-50634587 None:intergenic 25.0%
! CCAATAACTATAGAAATAAC+TGG + chr7_3:50635082-50635101 None:intergenic 25.0%
!!! CCAGTTATTTCTATAGTTAT+TGG - chr7_3:50635079-50635098 Msa1108060:intron 25.0%
! GAGTTAAAAATTAAATCACC+TGG + chr7_3:50635185-50635204 None:intergenic 25.0%
!!! CCAGTAAAATTTTGAGAAAA+TGG + chr7_3:50635435-50635454 None:intergenic 25.0%
!! CCATTTTCTCAAAATTTTAC+TGG - chr7_3:50635432-50635451 Msa1108060:CDS 25.0%
! CTAACTAACAATCTTATATC+CGG + chr7_3:50635581-50635600 None:intergenic 25.0%
! AGTTAATAATGTGCTTATGA+TGG - chr7_3:50635599-50635618 Msa1108060:intron 25.0%
! ATTTAATACGCAGATAAGAT+AGG - chr7_3:50635674-50635693 Msa1108060:CDS 25.0%
! ATTAACCCAATTAGTAAATG+AGG + chr7_3:50635722-50635741 None:intergenic 25.0%
! AAAGGTTTAAACCATTAAGA+TGG + chr7_3:50636058-50636077 None:intergenic 25.0%
! AACTCCAAATAGACATTAAA+AGG + chr7_3:50636076-50636095 None:intergenic 25.0%
! AACTTGAAAAATGATAACAC+GGG + chr7_3:50636125-50636144 None:intergenic 25.0%
! CAACTTGAAAAATGATAACA+CGG + chr7_3:50636126-50636145 None:intergenic 25.0%
!!! CTTCATGTTTCTTTTTTTCT+TGG + chr7_3:50636513-50636532 None:intergenic 25.0%
! AAAAAAGAAACATGAAGAAG+AGG - chr7_3:50636516-50636535 Msa1108060:intron 25.0%
! AAAAAGAAACATGAAGAAGA+GGG - chr7_3:50636517-50636536 Msa1108060:intron 25.0%
! TGGTAAGATAGAAAAACTAA+AGG - chr7_3:50636805-50636824 Msa1108060:CDS 25.0%
! CATGAATAATCCTAGAATAA+AGG - chr7_3:50636988-50637007 Msa1108060:intron 25.0%
!! TCATAGTTTTCCTTTATTCT+AGG + chr7_3:50637001-50637020 None:intergenic 25.0%
! TAGAATAAAGGAAAACTATG+AGG - chr7_3:50637000-50637019 Msa1108060:intron 25.0%
!! GAAAAAGGAAATTGAAGTTT+TGG - chr7_3:50637234-50637253 Msa1108060:intron 25.0%
! AACAGATATTAAGAGAATGA+TGG - chr7_3:50637267-50637286 Msa1108060:intron 25.0%
!!! GACATTTTCTAAGAAATGTA+TGG + chr7_3:50638160-50638179 None:intergenic 25.0%
! AAGACTAAGGAAGAAAAAAA+AGG + chr7_3:50638351-50638370 None:intergenic 25.0%
! AAGATAATAACATGATGTTG+TGG - chr7_3:50638421-50638440 Msa1108060:five_prime_UTR 25.0%
! TCAATGAATACAGCTCTTTT+CGG + chr7_3:50631095-50631114 None:intergenic 30.0%
TGAAGGAATGAATAGTTAGA+GGG + chr7_3:50631160-50631179 None:intergenic 30.0%
AGATGAATGAATGAGAGATT+GGG + chr7_3:50631212-50631231 None:intergenic 30.0%
GAGAGAGTTGTTAATATTGT+TGG + chr7_3:50631243-50631262 None:intergenic 30.0%
!!! TATCTTTCTCTCTCCTTTTT+TGG - chr7_3:50631342-50631361 Msa1108060:three_prime_UTR 30.0%
ATTGAGTAGAGATCCAAAAA+AGG + chr7_3:50631358-50631377 None:intergenic 30.0%
! TGTTCATTTTCCTCAATGTT+AGG - chr7_3:50631705-50631724 Msa1108060:intron 30.0%
AAAACCCAAAATCCAAAACT+GGG + chr7_3:50631803-50631822 None:intergenic 30.0%
AAAAACCCAAAATCCAAAAC+TGG + chr7_3:50631804-50631823 None:intergenic 30.0%
!!! CTTTTTTAGGATTTGCTTTC+TGG - chr7_3:50631942-50631961 Msa1108060:intron 30.0%
! GTAGACTTTTCATGAAGTAA+AGG - chr7_3:50632140-50632159 Msa1108060:CDS 30.0%
ATAGTTTAATTCTAACCACC+AGG - chr7_3:50632246-50632265 Msa1108060:CDS 30.0%
!!! TACTGGTAGTGATCTTTTTT+TGG - chr7_3:50632519-50632538 Msa1108060:CDS 30.0%
!!! ACTGGTAGTGATCTTTTTTT+GGG - chr7_3:50632520-50632539 Msa1108060:CDS 30.0%
! TTTTCGAAATCCAAAATGAC+CGG + chr7_3:50632960-50632979 None:intergenic 30.0%
ATTGGAGAATAAGTACCAAA+AGG - chr7_3:50633213-50633232 Msa1108060:intron 30.0%
! GTTATTACAGTCAAACCTTT+TGG + chr7_3:50633231-50633250 None:intergenic 30.0%
! CAAGTAATCAAATTTTCTCC+GGG + chr7_3:50633267-50633286 None:intergenic 30.0%
!!! TAGGTTTTGAATTGTGATTG+CGG - chr7_3:50633337-50633356 Msa1108060:intron 30.0%
CGGAAAATTGTATATGAATG+TGG - chr7_3:50633389-50633408 Msa1108060:intron 30.0%
!! TGAGAATTTTGGGGAATATA+AGG + chr7_3:50633724-50633743 None:intergenic 30.0%
! TTTAAAGCCTGAAATAGCAA+TGG + chr7_3:50633786-50633805 None:intergenic 30.0%
!!! TTCCTCTTTTTTGCAGTTTA+TGG - chr7_3:50634024-50634043 Msa1108060:intron 30.0%
TTCCATAAACTGCAAAAAAG+AGG + chr7_3:50634029-50634048 None:intergenic 30.0%
!! CTTTAGTATTTCTACCCTTT+TGG + chr7_3:50634141-50634160 None:intergenic 30.0%
! GAAAGTATAAAGCGTAACTT+TGG - chr7_3:50634160-50634179 Msa1108060:intron 30.0%
!! GCTTTAAAATAGGTCCTATT+TGG + chr7_3:50634451-50634470 None:intergenic 30.0%
!!! TCGGTTTTCTGCTTTAAAAT+AGG + chr7_3:50634461-50634480 None:intergenic 30.0%
!!! TATTTTAAAGCAGAAAACCG+AGG - chr7_3:50634460-50634479 Msa1108060:CDS 30.0%
!! ACACTATTTGCTATTTCACT+TGG - chr7_3:50634659-50634678 Msa1108060:CDS 30.0%
! TATTTCACTTGGAGGATTTT+TGG - chr7_3:50634670-50634689 Msa1108060:CDS 30.0%
TCATCTGAATTCATATCATG+CGG + chr7_3:50634732-50634751 None:intergenic 30.0%
TGTCAATGAAAGTAACTACT+GGG + chr7_3:50634876-50634895 None:intergenic 30.0%
GAAAGTCGATCATTATCAAA+CGG + chr7_3:50635001-50635020 None:intergenic 30.0%
! CATAATTTGAGATCCATGTT+TGG - chr7_3:50635046-50635065 Msa1108060:intron 30.0%
ATTTCTATAGTTATTGGGGA+AGG - chr7_3:50635085-50635104 Msa1108060:intron 30.0%
TAATTTATTAGCGCATCCAA+TGG + chr7_3:50635131-50635150 None:intergenic 30.0%
ATTCATCTAACATGCACTAT+TGG + chr7_3:50635277-50635296 None:intergenic 30.0%
TTGTGTGATTATGTTCAAAC+CGG - chr7_3:50635559-50635578 Msa1108060:intron 30.0%
! GCTTATGATGGAATTCAATT+TGG - chr7_3:50635611-50635630 Msa1108060:intron 30.0%
!! TAAGATGCTTTTTGTACGAT+TGG + chr7_3:50635648-50635667 None:intergenic 30.0%
!! AATCGTACAAAAAGCATCTT+AGG - chr7_3:50635647-50635666 Msa1108060:intron 30.0%
TAAATGAGGAAAAATAACGC+AGG + chr7_3:50635708-50635727 None:intergenic 30.0%
!! AATGTTCTGATTTGTTCTAC+TGG - chr7_3:50635739-50635758 Msa1108060:CDS 30.0%
! TTGATCTTAACTTTTGACCT+TGG - chr7_3:50636096-50636115 Msa1108060:intron 30.0%
ATGCATAAGTTCCGAAAAAT+CGG - chr7_3:50636458-50636477 Msa1108060:intron 30.0%
!! TAAAGGCAGATTTTAATCGA+AGG - chr7_3:50636822-50636841 Msa1108060:CDS 30.0%
GAAAATCATTGCGTTCAATA+AGG - chr7_3:50637090-50637109 Msa1108060:intron 30.0%
!! TTGTTTAGTTCTTCTATCTG+AGG + chr7_3:50637208-50637227 None:intergenic 30.0%
TCAGATAGAAGAACTAAACA+AGG - chr7_3:50637207-50637226 Msa1108060:intron 30.0%
ACTAAACAAGGATGTGAAAA+AGG - chr7_3:50637219-50637238 Msa1108060:intron 30.0%
CTATTCTTTGATTCCGAATT+TGG + chr7_3:50637331-50637350 None:intergenic 30.0%
GTAAGTTTGAAAGTAGGAAA+TGG - chr7_3:50637457-50637476 Msa1108060:intron 30.0%
GTTGAACTCACATTAAGAAA+AGG + chr7_3:50637527-50637546 None:intergenic 30.0%
AAGGATAGTACATCTTTCAA+TGG + chr7_3:50637638-50637657 None:intergenic 30.0%
! ATCCTTCTAAAAACTTTGCA+TGG - chr7_3:50637652-50637671 Msa1108060:intron 30.0%
ATGCCTTCAATCTTAAGTAT+TGG + chr7_3:50637692-50637711 None:intergenic 30.0%
! CTTAAGATTGAAGGCATATT+TGG - chr7_3:50637695-50637714 Msa1108060:intron 30.0%
! TAATAATTTGCGAAAACGGA+AGG + chr7_3:50637783-50637802 None:intergenic 30.0%
! CAGGTAATAATTTGCGAAAA+CGG + chr7_3:50637787-50637806 None:intergenic 30.0%
TCTAGTTGAAAACTACATCT+TGG - chr7_3:50637850-50637869 Msa1108060:intron 30.0%
TGTTCATCTATGTCTATTCA+GGG + chr7_3:50638382-50638401 None:intergenic 30.0%
ATGTTCATCTATGTCTATTC+AGG + chr7_3:50638383-50638402 None:intergenic 30.0%
GTGAAGGAATGAATAGTTAG+AGG + chr7_3:50631161-50631180 None:intergenic 35.0%
TTCATTCCTTCACACACATT+TGG - chr7_3:50631168-50631187 Msa1108060:intron 35.0%
AAAAAGCCAAATGTGTGTGA+AGG + chr7_3:50631177-50631196 None:intergenic 35.0%
GATGAATGAATGAGAGATTG+GGG + chr7_3:50631211-50631230 None:intergenic 35.0%
GAGATGAATGAATGAGAGAT+TGG + chr7_3:50631213-50631232 None:intergenic 35.0%
TTGTTTAGGAACGTGTTTCA+TGG - chr7_3:50631465-50631484 Msa1108060:three_prime_UTR 35.0%
GAATCATGTTCCTAACATTG+AGG + chr7_3:50631718-50631737 None:intergenic 35.0%
!!! ACTTTTTGGTGTTTAGATCG+AGG - chr7_3:50631898-50631917 Msa1108060:intron 35.0%
! TACTCGTAGTGATCTTTTTC+TGG - chr7_3:50632027-50632046 Msa1108060:intron 35.0%
!!! CTGGTAGCGATATTTTTTCT+TGG - chr7_3:50632190-50632209 Msa1108060:CDS 35.0%
AGGAACTGTTGACACTTAAA+AGG + chr7_3:50632345-50632364 None:intergenic 35.0%
! TTTTGTGAAAACTCGGTATC+CGG + chr7_3:50632464-50632483 None:intergenic 35.0%
! TTAGTGTTACTGCTAAGTTG+AGG - chr7_3:50632826-50632845 Msa1108060:CDS 35.0%
!! TGAAGAAGAAAGAGTATCCA+TGG - chr7_3:50632853-50632872 Msa1108060:CDS 35.0%
AACCTTGATCCCAATGTTAA+AGG - chr7_3:50632882-50632901 Msa1108060:CDS 35.0%
TTGATCCCAATGTTAAAGGT+GGG - chr7_3:50632886-50632905 Msa1108060:CDS 35.0%
! TTCTTTTCCAGATCAACAAG+AGG + chr7_3:50632984-50633003 None:intergenic 35.0%
TTAATGGTTGAGAACAGGTT+CGG - chr7_3:50633143-50633162 Msa1108060:intron 35.0%
AATATGTGCACAATCTTGCT+AGG - chr7_3:50633318-50633337 Msa1108060:intron 35.0%
TGCAGTCGTAAATCAAAATG+TGG - chr7_3:50633419-50633438 Msa1108060:intron 35.0%
! ATTGTGTTTTCATATCGTGC+TGG - chr7_3:50633566-50633585 Msa1108060:intron 35.0%
ATATTCCCCAAAATTCTCAC+CGG - chr7_3:50633725-50633744 Msa1108060:CDS 35.0%
! AGAATTTTACCAGCGTTTAC+CGG + chr7_3:50633747-50633766 None:intergenic 35.0%
ACATCTAACTCCTATACAGA+GGG - chr7_3:50633818-50633837 Msa1108060:intron 35.0%
AAGATGTGATCAAGGAAAGT+TGG + chr7_3:50633870-50633889 None:intergenic 35.0%
GAGAATTCTATTAGAGGTAG+TGG + chr7_3:50634000-50634019 None:intergenic 35.0%
!! CTGCTATTGTTACTGGTTTA+GGG - chr7_3:50634080-50634099 Msa1108060:intron 35.0%
ATGTTTATAGGCCACCAAAA+GGG - chr7_3:50634124-50634143 Msa1108060:intron 35.0%
!! TAGTATTTCTACCCTTTTGG+TGG + chr7_3:50634138-50634157 None:intergenic 35.0%
CATTGCTAACACTTAACAAG+TGG + chr7_3:50634243-50634262 None:intergenic 35.0%
ATTGTCCTAATAGCAAAGCT+AGG + chr7_3:50634282-50634301 None:intergenic 35.0%
!! CTTTGCTATTAGGACAATAG+CGG - chr7_3:50634284-50634303 Msa1108060:intron 35.0%
GCGTACAAATAAAAAAGGGA+TGG + chr7_3:50634563-50634582 None:intergenic 35.0%
GAAATAGCAAATAGTGTTGC+AGG + chr7_3:50634656-50634675 None:intergenic 35.0%
!! CTATTTGCTATTTCACTTGG+AGG - chr7_3:50634662-50634681 Msa1108060:CDS 35.0%
ACCATCTGTCAGTATCAAAT+GGG + chr7_3:50634786-50634805 None:intergenic 35.0%
TACCATCTGTCAGTATCAAA+TGG + chr7_3:50634787-50634806 None:intergenic 35.0%
ATGGAATATGCAGATCATCA+TGG - chr7_3:50634847-50634866 Msa1108060:intron 35.0%
GTGTCAATGAAAGTAACTAC+TGG + chr7_3:50634877-50634896 None:intergenic 35.0%
!!! AGGCTTTGTTTTTGTTACCA+TGG - chr7_3:50634971-50634990 Msa1108060:intron 35.0%
!! CATTATCAAACGGATTACCA+TGG + chr7_3:50634991-50635010 None:intergenic 35.0%
TCTAACATGCACTATTGGAA+GGG + chr7_3:50635272-50635291 None:intergenic 35.0%
ATCTAACATGCACTATTGGA+AGG + chr7_3:50635273-50635292 None:intergenic 35.0%
ACATCATTACAAAGAAGCTC+AGG + chr7_3:50635303-50635322 None:intergenic 35.0%
!! TCTGATTTGTTCTACTGGTT+TGG - chr7_3:50635744-50635763 Msa1108060:CDS 35.0%
TATTACGTGATTTAGTCCAG+AGG - chr7_3:50635775-50635794 Msa1108060:intron 35.0%
TGCAAATTGAAAGTTGCAGA+TGG - chr7_3:50635960-50635979 Msa1108060:intron 35.0%
! GCTATGGATGTAAGTTTTAC+TGG - chr7_3:50636312-50636331 Msa1108060:intron 35.0%
!!! TATGCATGCGATGTTTTAAC+AGG + chr7_3:50636445-50636464 None:intergenic 35.0%
ATAAGTTCCGAAAAATCGGT+GGG - chr7_3:50636462-50636481 Msa1108060:intron 35.0%
!!! CTTTTTTTCTTGGGATCTAC+AGG + chr7_3:50636503-50636522 None:intergenic 35.0%
TCAGAATCAGAAACTTTCTC+AGG + chr7_3:50636551-50636570 None:intergenic 35.0%
AAAGAAACTGGAAGAGAAAC+TGG - chr7_3:50636655-50636674 Msa1108060:CDS 35.0%
TCTATCTTACCATTCAGCAA+TGG + chr7_3:50636797-50636816 None:intergenic 35.0%
!! TTCTTCAGCTTGTTAGCATT+AGG + chr7_3:50636860-50636879 None:intergenic 35.0%
AATCATTGCGTTCAATAAGG+AGG - chr7_3:50637093-50637112 Msa1108060:intron 35.0%
TTAATGTTGTGAAGTCGGTT+GGG - chr7_3:50637131-50637150 Msa1108060:intron 35.0%
GATGTTCAGTTAGTAAAACC+AGG - chr7_3:50637157-50637176 Msa1108060:intron 35.0%
! AATGATGGAGCAATTGAAAG+TGG - chr7_3:50637282-50637301 Msa1108060:intron 35.0%
TTTCAAACTAGAAGAGCCTA+CGG + chr7_3:50637398-50637417 None:intergenic 35.0%
!! TGCCATGCAAAGTTTTTAGA+AGG + chr7_3:50637657-50637676 None:intergenic 35.0%
GCACCAATACTTAAGATTGA+AGG - chr7_3:50637686-50637705 Msa1108060:intron 35.0%
ATTACCTGTGTTTGTGTCTA+TGG - chr7_3:50637799-50637818 Msa1108060:intron 35.0%
TTCATAGCTAACGCATATAG+CGG - chr7_3:50637825-50637844 Msa1108060:intron 35.0%
!!! TCTTTTCGGTTTGGCAGTTA+TGG + chr7_3:50631081-50631100 None:intergenic 40.0%
! GAATACAGCTCTTTTCGGTT+TGG + chr7_3:50631090-50631109 None:intergenic 40.0%
TTCGTAGAGATCGTCAATGA+AGG + chr7_3:50631276-50631295 None:intergenic 40.0%
TTGGATCTCTACTCAATCAC+TGG - chr7_3:50631361-50631380 Msa1108060:three_prime_UTR 40.0%
!!! TGTTTTTGGCGTTAAGATCG+AGG - chr7_3:50631623-50631642 Msa1108060:intron 40.0%
! ATGAATCAATGGCCCAGTTT+TGG - chr7_3:50631788-50631807 Msa1108060:intron 40.0%
!!! AATGGCCCAGTTTTGGATTT+TGG - chr7_3:50631795-50631814 Msa1108060:intron 40.0%
!!! ATGGCCCAGTTTTGGATTTT+GGG - chr7_3:50631796-50631815 Msa1108060:intron 40.0%
AATCCAACTGTTCGCTAACA+GGG + chr7_3:50632414-50632433 None:intergenic 40.0%
! ATTTGGGGGTTTGAGTTTGA+AGG - chr7_3:50632651-50632670 Msa1108060:CDS 40.0%
! AGGAGTGTGGTTAGGAAATA+TGG - chr7_3:50632671-50632690 Msa1108060:CDS 40.0%
!!! AGGGCTGGTTTTGAAAAGAA+GGG - chr7_3:50632794-50632813 Msa1108060:CDS 40.0%
! TGTTACTGCTAAGTTGAGGA+AGG - chr7_3:50632830-50632849 Msa1108060:CDS 40.0%
!! AAGAAAGAGTATCCATGGTC+TGG - chr7_3:50632858-50632877 Msa1108060:CDS 40.0%
CACCTTTAACATTGGGATCA+AGG + chr7_3:50632887-50632906 None:intergenic 40.0%
CTTGATCCCAATGTTAAAGG+TGG - chr7_3:50632885-50632904 Msa1108060:CDS 40.0%
TGATCCCAATGTTAAAGGTG+GGG - chr7_3:50632887-50632906 Msa1108060:CDS 40.0%
AACACCCCACCTTTAACATT+GGG + chr7_3:50632894-50632913 None:intergenic 40.0%
TTCTCTTTGAGTGGCTTGAA+AGG + chr7_3:50632930-50632949 None:intergenic 40.0%
! AAATCCAAAATGACCGGCTT+TGG + chr7_3:50632954-50632973 None:intergenic 40.0%
GGGTATGTTATGTTATGCTG+AGG - chr7_3:50633540-50633559 Msa1108060:intron 40.0%
! TGTTCTGAGTGTTATTCACC+TGG - chr7_3:50633591-50633610 Msa1108060:CDS 40.0%
! GTTTACCGGTGAGAATTTTG+GGG + chr7_3:50633733-50633752 None:intergenic 40.0%
! CGTTTACCGGTGAGAATTTT+GGG + chr7_3:50633734-50633753 None:intergenic 40.0%
!! ACTGTCTCCATTGCTATTTC+AGG - chr7_3:50633776-50633795 Msa1108060:intron 40.0%
CACATCTAACTCCTATACAG+AGG - chr7_3:50633817-50633836 Msa1108060:intron 40.0%
TTGCAGTTTATGGAACTCCA+TGG - chr7_3:50634034-50634053 Msa1108060:intron 40.0%
GATGATCCTGCTATTGTTAC+TGG - chr7_3:50634073-50634092 Msa1108060:intron 40.0%
CCTAAACCAGTAACAATAGC+AGG + chr7_3:50634082-50634101 None:intergenic 40.0%
!! CCTGCTATTGTTACTGGTTT+AGG - chr7_3:50634079-50634098 Msa1108060:intron 40.0%
! ACTGGTTTAGGGAGTATAGA+TGG - chr7_3:50634091-50634110 Msa1108060:intron 40.0%
! GTTTAGGGAGTATAGATGGT+AGG - chr7_3:50634095-50634114 Msa1108060:intron 40.0%
GGTAGGACCTACATGTTTAT+AGG - chr7_3:50634112-50634131 Msa1108060:intron 40.0%
! TTGGTGGCCTATAAACATGT+AGG + chr7_3:50634122-50634141 None:intergenic 40.0%
CATGTTTATAGGCCACCAAA+AGG - chr7_3:50634123-50634142 Msa1108060:intron 40.0%
!! GCTATCCTAGCTTTGCTATT+AGG - chr7_3:50634274-50634293 Msa1108060:intron 40.0%
TGCATGTATGTGTGCCAAAT+AGG - chr7_3:50634434-50634453 Msa1108060:CDS 40.0%
CCACGTATTACTGGGAATAA+AGG + chr7_3:50634503-50634522 None:intergenic 40.0%
CCTTTATTCCCAGTAATACG+TGG - chr7_3:50634500-50634519 Msa1108060:CDS 40.0%
TGAAACGACCACGTATTACT+GGG + chr7_3:50634511-50634530 None:intergenic 40.0%
TTGAAACGACCACGTATTAC+TGG + chr7_3:50634512-50634531 None:intergenic 40.0%
CCATCTGTCAGTATCAAATG+GGG + chr7_3:50634785-50634804 None:intergenic 40.0%
TTACTTTCATTGACACCCCT+GGG - chr7_3:50634881-50634900 Msa1108060:intron 40.0%
ATATGCTGACCTCAAATCTG+AGG - chr7_3:50634906-50634925 Msa1108060:intron 40.0%
GGTTAAGTTCCTCAGATTTG+AGG + chr7_3:50634918-50634937 None:intergenic 40.0%
AGCATAACTAGCGACATACT+TGG + chr7_3:50634939-50634958 None:intergenic 40.0%
TCTATAGTTATTGGGGAAGG+TGG - chr7_3:50635088-50635107 Msa1108060:intron 40.0%
! AATGATAACACGGGTTACCA+AGG + chr7_3:50636116-50636135 None:intergenic 40.0%
TGAGTTCCTACACAATGAAC+AGG + chr7_3:50636403-50636422 None:intergenic 40.0%
CATAAGTTCCGAAAAATCGG+TGG - chr7_3:50636461-50636480 Msa1108060:intron 40.0%
GAATCAGAAACTTTCTCAGG+AGG + chr7_3:50636548-50636567 None:intergenic 40.0%
TCATCTAAATCGAGTTTCGG+AGG + chr7_3:50636629-50636648 None:intergenic 40.0%
TCCGAAACTCGATTTAGATG+AGG - chr7_3:50636628-50636647 Msa1108060:CDS 40.0%
GCCTCATCTAAATCGAGTTT+CGG + chr7_3:50636632-50636651 None:intergenic 40.0%
AGATGAGGCGATAAAGAAAC+TGG - chr7_3:50636643-50636662 Msa1108060:CDS 40.0%
AACTGGAAGAGAAACTGGAA+AGG - chr7_3:50636660-50636679 Msa1108060:CDS 40.0%
ACTGGAAGAGAAACTGGAAA+GGG - chr7_3:50636661-50636680 Msa1108060:CDS 40.0%
GGTTGATCAAGAATTGTCTG+AGG - chr7_3:50636685-50636704 Msa1108060:CDS 40.0%
TGTTAAGCCCAATGCTTTAG+CGG + chr7_3:50636711-50636730 None:intergenic 40.0%
TCAGCAATGGATCAATAGGT+TGG + chr7_3:50636784-50636803 None:intergenic 40.0%
CCATTCAGCAATGGATCAAT+AGG + chr7_3:50636788-50636807 None:intergenic 40.0%
CCTATTGATCCATTGCTGAA+TGG - chr7_3:50636785-50636804 Msa1108060:CDS 40.0%
AACAAGCTGAAGAAGAAGCA+TGG - chr7_3:50636866-50636885 Msa1108060:exon 40.0%
TCTTCTGTCAGACAGAAACA+AGG - chr7_3:50636919-50636938 Msa1108060:intron 40.0%
GGTGGTTAATGTTGTGAAGT+CGG - chr7_3:50637126-50637145 Msa1108060:intron 40.0%
GTTAATGTTGTGAAGTCGGT+TGG - chr7_3:50637130-50637149 Msa1108060:intron 40.0%
TTAGTAAAACCAGGACGAGA+TGG - chr7_3:50637166-50637185 Msa1108060:intron 40.0%
TTTCAAACTTACATCCCCAG+AGG + chr7_3:50637449-50637468 None:intergenic 40.0%
GGGGATGTAAGTTTGAAAGT+AGG - chr7_3:50637451-50637470 Msa1108060:intron 40.0%
GTACAAGTGGCTGAAGATAT+TGG + chr7_3:50638120-50638139 None:intergenic 40.0%
TTGTACATCATCCAGCATCA+TGG - chr7_3:50638134-50638153 Msa1108060:intron 40.0%
CAGGGAAACATTCAAGACTA+AGG + chr7_3:50638364-50638383 None:intergenic 40.0%
AGAGGGCGATACTTCTTATG+TGG + chr7_3:50631143-50631162 None:intergenic 45.0%
AGTGTCAACAGTTCCTGTGT+TGG - chr7_3:50632349-50632368 Msa1108060:CDS 45.0%
GTGTCAACAGTTCCTGTGTT+GGG - chr7_3:50632350-50632369 Msa1108060:CDS 45.0%
GCTTTGCTCCGACTTCAATT+GGG - chr7_3:50632386-50632405 Msa1108060:CDS 45.0%
ATCCAACTGTTCGCTAACAG+GGG + chr7_3:50632413-50632432 None:intergenic 45.0%
CAATCCAACTGTTCGCTAAC+AGG + chr7_3:50632415-50632434 None:intergenic 45.0%
CTGTTAGCGAACAGTTGGAT+TGG - chr7_3:50632413-50632432 Msa1108060:CDS 45.0%
ACCAAAGTCCGACTAATCCA+GGG + chr7_3:50632441-50632460 None:intergenic 45.0%
! GGTTTGAGTTTGAAGGAGTG+TGG - chr7_3:50632658-50632677 Msa1108060:CDS 45.0%
! GAGTTTGAAGGAGTGTGGTT+AGG - chr7_3:50632663-50632682 Msa1108060:CDS 45.0%
TCCTTCCCAAGGTTCTCAAA+GGG + chr7_3:50632773-50632792 None:intergenic 45.0%
!!! CAGGGCTGGTTTTGAAAAGA+AGG - chr7_3:50632793-50632812 Msa1108060:CDS 45.0%
CAACACCCCACCTTTAACAT+TGG + chr7_3:50632895-50632914 None:intergenic 45.0%
ACTCAAAGAGAAGCCAAAGC+CGG - chr7_3:50632938-50632957 Msa1108060:CDS 45.0%
CGAAAAGCCTCTTGTTGATC+TGG - chr7_3:50632974-50632993 Msa1108060:CDS 45.0%
TGTTAGTGTGTGTGTGTGTG+TGG - chr7_3:50633037-50633056 Msa1108060:CDS 45.0%
TTGAGAACAGGTTCGGAAGA+TGG - chr7_3:50633150-50633169 Msa1108060:intron 45.0%
CAGTGATCAGATTCGCTCAT+TGG - chr7_3:50633195-50633214 Msa1108060:intron 45.0%
AGTGCAATATGCACAAGTCC+AGG + chr7_3:50633612-50633631 None:intergenic 45.0%
! GCGTTTACCGGTGAGAATTT+TGG + chr7_3:50633735-50633754 None:intergenic 45.0%
AAATTCTCACCGGTAAACGC+TGG - chr7_3:50633735-50633754 Msa1108060:CDS 45.0%
! TCAAGGAAAGTTGGCCTGTT+AGG + chr7_3:50633861-50633880 None:intergenic 45.0%
CATAACCTTCTCGATCACCA+TGG + chr7_3:50634054-50634073 None:intergenic 45.0%
! TTCTAGTGGACATACCCATG+TGG + chr7_3:50634196-50634215 None:intergenic 45.0%
CCCCATTTGATACTGACAGA+TGG - chr7_3:50634782-50634801 Msa1108060:intron 45.0%
TAGGAAAGCTCTACGCATGA+TGG - chr7_3:50634828-50634847 Msa1108060:intron 45.0%
! GTTACTTTCATTGACACCCC+TGG - chr7_3:50634880-50634899 Msa1108060:intron 45.0%
TACTTTCATTGACACCCCTG+GGG - chr7_3:50634882-50634901 Msa1108060:intron 45.0%
! TGATCGACTTTCATGTACGC+AGG - chr7_3:50635009-50635028 Msa1108060:intron 45.0%
! GATCGACTTTCATGTACGCA+GGG - chr7_3:50635010-50635029 Msa1108060:intron 45.0%
GAGATCCATGTTTGGTCTGA+AGG - chr7_3:50635054-50635073 Msa1108060:intron 45.0%
ATTAGCGCATCCAATGGCAA+GGG + chr7_3:50635125-50635144 None:intergenic 45.0%
TATTAGCGCATCCAATGGCA+AGG + chr7_3:50635126-50635145 None:intergenic 45.0%
ATGCAGTGTTCTATGTTGCC+AGG - chr7_3:50635164-50635183 Msa1108060:intron 45.0%
TGGAAGGGAGGACAAAAGAA+AGG + chr7_3:50635257-50635276 None:intergenic 45.0%
AACATGCACTATTGGAAGGG+AGG + chr7_3:50635269-50635288 None:intergenic 45.0%
!! AAGTGTCGGTACTACAGAGT+TGG + chr7_3:50635348-50635367 None:intergenic 45.0%
ACTTCCGATTGAGTGTCCAA+TGG - chr7_3:50635364-50635383 Msa1108060:CDS 45.0%
TGATCCTTTGCATGCAGCAA+AGG - chr7_3:50636144-50636163 Msa1108060:intron 45.0%
CTATCCTTTGCTGCATGCAA+AGG + chr7_3:50636151-50636170 None:intergenic 45.0%
! TTTTTCCAATAGGAGCCCCT+CGG - chr7_3:50636231-50636250 Msa1108060:intron 45.0%
ATCTGTTGAGAGGTCCAACT+TGG + chr7_3:50636273-50636292 None:intergenic 45.0%
CTTTGGCCTGTTCATTGTGT+AGG - chr7_3:50636394-50636413 Msa1108060:intron 45.0%
!!! CCTTGAACCCACCGATTTTT+CGG + chr7_3:50636472-50636491 None:intergenic 45.0%
! AAAATCGGTGGGTTCAAGGA+AGG - chr7_3:50636473-50636492 Msa1108060:intron 45.0%
TCTGTCAGACAGAAACAAGG+AGG - chr7_3:50636922-50636941 Msa1108060:intron 45.0%
! CAGTTGTTGCGTAAGTGTTG+CGG + chr7_3:50636948-50636967 None:intergenic 45.0%
! ATCATCCAAATCGCTTGCTG+AGG + chr7_3:50637059-50637078 None:intergenic 45.0%
CAATAAGGAGGTAGACTTGC+AGG - chr7_3:50637105-50637124 Msa1108060:intron 45.0%
GATGGAGCAATTGAAAGTGG+AGG - chr7_3:50637285-50637304 Msa1108060:intron 45.0%
AATAAAGCAGAGCCTTGCAG+AGG - chr7_3:50637372-50637391 Msa1108060:intron 45.0%
! AACCTGATGTCTGAAACCTC+TGG - chr7_3:50637430-50637449 Msa1108060:intron 45.0%
! ACCTGATGTCTGAAACCTCT+GGG - chr7_3:50637431-50637450 Msa1108060:intron 45.0%
! GACGAGTTGAGAGAGAAAGT+TGG - chr7_3:50637490-50637509 Msa1108060:intron 45.0%
TGTCTGACACTGACATGTGT+CGG + chr7_3:50637724-50637743 None:intergenic 45.0%
TAGAATGCAATCACACGCGT+CGG + chr7_3:50637758-50637777 None:intergenic 45.0%
AGCACCATAGACACAAACAC+AGG + chr7_3:50637806-50637825 None:intergenic 45.0%
!! TCATGTGGAGTTGGTGAAGA+TGG - chr7_3:50638047-50638066 Msa1108060:intron 45.0%
GATGCTGGATGATGTACAAG+TGG + chr7_3:50638133-50638152 None:intergenic 45.0%
GAAATGTATGGCCATGATGC+TGG + chr7_3:50638148-50638167 None:intergenic 45.0%
ATGAGATACCATGCGAAGTG+TGG - chr7_3:50638195-50638214 Msa1108060:five_prime_UTR 45.0%
TATATCAGCCACACTTCGCA+TGG + chr7_3:50638206-50638225 None:intergenic 45.0%
!! AAGATAAAATAATAATAAAA+CGG - chr7_3:50634408-50634427 Msa1108060:CDS 5.0%
ATTCTAACCACCAGGCAAGC+CGG - chr7_3:50632254-50632273 Msa1108060:CDS 50.0%
! TCACAGAGGAGCACACTCTT+AGG + chr7_3:50632301-50632320 None:intergenic 50.0%
TTCGAACCTGAGACTCACAG+AGG + chr7_3:50632315-50632334 None:intergenic 50.0%
GGCTTTGCTCCGACTTCAAT+TGG - chr7_3:50632385-50632404 Msa1108060:CDS 50.0%
ACAGGGGACCCAATTGAAGT+CGG + chr7_3:50632397-50632416 None:intergenic 50.0%
!! GATTGGTCCCCTGGATTAGT+CGG - chr7_3:50632430-50632449 Msa1108060:CDS 50.0%
CCAAAGTCCGACTAATCCAG+GGG + chr7_3:50632440-50632459 None:intergenic 50.0%
GACCAAAGTCCGACTAATCC+AGG + chr7_3:50632442-50632461 None:intergenic 50.0%
!! GGATTAGTCGGACTTTGGTC+CGG - chr7_3:50632442-50632461 Msa1108060:CDS 50.0%
TCTTCTTCTGCAACCCTTGC+TGG - chr7_3:50632696-50632715 Msa1108060:CDS 50.0%
AGAAGCAGCAGAACCAGCAA+GGG + chr7_3:50632712-50632731 None:intergenic 50.0%
! CTGCTGCTTCTGATCTTCTG+AGG - chr7_3:50632721-50632740 Msa1108060:CDS 50.0%
! GATCTTCTGAGGAGTTCGAC+TGG - chr7_3:50632732-50632751 Msa1108060:CDS 50.0%
! TGGTGTCCCTTTGAGAACCT+TGG - chr7_3:50632764-50632783 Msa1108060:CDS 50.0%
! GGTGTCCCTTTGAGAACCTT+GGG - chr7_3:50632765-50632784 Msa1108060:CDS 50.0%
! TCCCTTTGAGAACCTTGGGA+AGG - chr7_3:50632769-50632788 Msa1108060:CDS 50.0%
GTCCTTCCCAAGGTTCTCAA+AGG + chr7_3:50632774-50632793 None:intergenic 50.0%
TTGAGAACCTTGGGAAGGAC+AGG - chr7_3:50632774-50632793 Msa1108060:CDS 50.0%
TGAGAACCTTGGGAAGGACA+GGG - chr7_3:50632775-50632794 Msa1108060:CDS 50.0%
GGATCAAGGTTACCAGACCA+TGG + chr7_3:50632873-50632892 None:intergenic 50.0%
! GGCTTTGGCTTCTCTTTGAG+TGG + chr7_3:50632939-50632958 None:intergenic 50.0%
! GAAGCCAAAGCCGGTCATTT+TGG - chr7_3:50632947-50632966 Msa1108060:CDS 50.0%
GATGGCAGAGGAAACTGGTT+TGG - chr7_3:50633168-50633187 Msa1108060:intron 50.0%
GCAATGCTGACCCTCTGTAT+AGG + chr7_3:50633831-50633850 None:intergenic 50.0%
GCATTGCACGACATCCTAAC+AGG - chr7_3:50633844-50633863 Msa1108060:intron 50.0%
GAACTCCATGGTGATCGAGA+AGG - chr7_3:50634046-50634065 Msa1108060:intron 50.0%
! TTTGGGATGCCAACTCCACA+TGG - chr7_3:50634178-50634197 Msa1108060:intron 50.0%
TTGGGATGCCAACTCCACAT+GGG - chr7_3:50634179-50634198 Msa1108060:intron 50.0%
TGGACATACCCATGTGGAGT+TGG + chr7_3:50634190-50634209 None:intergenic 50.0%
GTCGCTATACCAGTTTCTGC+TGG - chr7_3:50634306-50634325 Msa1108060:intron 50.0%
CTAGATGAGCCAGCAGAAAC+TGG + chr7_3:50634318-50634337 None:intergenic 50.0%
!! GTTTCTGCTGGCTCATCTAG+CGG - chr7_3:50634318-50634337 Msa1108060:intron 50.0%
TGGCACCTTCAGACCAAACA+TGG + chr7_3:50635062-50635081 None:intergenic 50.0%
GTTATTGGGGAAGGTGGATC+TGG - chr7_3:50635094-50635113 Msa1108060:intron 50.0%
! GGACACTCAATCGGAAGTGT+CGG + chr7_3:50635362-50635381 None:intergenic 50.0%
CCGACCATTGGACACTCAAT+CGG + chr7_3:50635371-50635390 None:intergenic 50.0%
CCGATTGAGTGTCCAATGGT+CGG - chr7_3:50635368-50635387 Msa1108060:CDS 50.0%
! TTCGTGTCATTGCCGACCAT+TGG + chr7_3:50635383-50635402 None:intergenic 50.0%
AGTGTCTGTCCTTGCTTCGT+AGG - chr7_3:50635477-50635496 Msa1108060:CDS 50.0%
! TTTTGGGCACCTACGAAGCA+AGG + chr7_3:50635489-50635508 None:intergenic 50.0%
!! GAGTTCTAAAGCTGCTCCCA+AGG - chr7_3:50635820-50635839 Msa1108060:intron 50.0%
GTGCACATGCTGATCCAAGT+TGG - chr7_3:50636256-50636275 Msa1108060:intron 50.0%
! CCGAAAAATCGGTGGGTTCA+AGG - chr7_3:50636469-50636488 Msa1108060:intron 50.0%
GGAAGAGAAACTGGAAAGGG+AGG - chr7_3:50636664-50636683 Msa1108060:CDS 50.0%
! TCTGAGGCCGCTAAAGCATT+GGG - chr7_3:50636701-50636720 Msa1108060:CDS 50.0%
TAAGGAGGTAGACTTGCAGG+TGG - chr7_3:50637108-50637127 Msa1108060:intron 50.0%
AAACCAGGACGAGATGGCAA+CGG - chr7_3:50637172-50637191 Msa1108060:intron 50.0%
!! ATTTGGTGTCCCTCCAGCTT+TGG + chr7_3:50637314-50637333 None:intergenic 50.0%
AGCTGGAGGGACACCAAATT+CGG - chr7_3:50637315-50637334 Msa1108060:intron 50.0%
! CCTGATGTCTGAAACCTCTG+GGG - chr7_3:50637432-50637451 Msa1108060:intron 50.0%
GTCAGAGAATGCTGCTCATG+TGG - chr7_3:50638032-50638051 Msa1108060:intron 50.0%
GAATGCTGCTCATGTGGAGT+TGG - chr7_3:50638038-50638057 Msa1108060:intron 50.0%
TGTGCTCCTCTGTGAGTCTC+AGG - chr7_3:50632306-50632325 Msa1108060:CDS 55.0%
TGTGTTGGGCCGTCCATACA+GGG - chr7_3:50632364-50632383 Msa1108060:CDS 55.0%
GGAGCAAAGCCCTGTATGGA+CGG + chr7_3:50632376-50632395 None:intergenic 55.0%
AGTCGGAGCAAAGCCCTGTA+TGG + chr7_3:50632380-50632399 None:intergenic 55.0%
GTCCCCTGTTAGCGAACAGT+TGG - chr7_3:50632408-50632427 Msa1108060:CDS 55.0%
!! GAACAGTTGGATTGGTCCCC+TGG - chr7_3:50632421-50632440 Msa1108060:CDS 55.0%
!! CCCCTGGATTAGTCGGACTT+TGG - chr7_3:50632437-50632456 Msa1108060:CDS 55.0%
CAGAAGCAGCAGAACCAGCA+AGG + chr7_3:50632713-50632732 None:intergenic 55.0%
! CTTCTGAGGAGTTCGACTGG+CGG - chr7_3:50632735-50632754 Msa1108060:CDS 55.0%
AGTTCGACTGGCGGTTTCAC+TGG - chr7_3:50632744-50632763 Msa1108060:CDS 55.0%
ACAGGTTCGGAAGATGGCAG+AGG - chr7_3:50633156-50633175 Msa1108060:intron 55.0%
CGGAAGATGGCAGAGGAAAC+TGG - chr7_3:50633163-50633182 Msa1108060:intron 55.0%
TGAGGTCAGCATATGCCCCA+GGG + chr7_3:50634900-50634919 None:intergenic 55.0%
TTGAGGTCAGCATATGCCCC+AGG + chr7_3:50634901-50634920 None:intergenic 55.0%
ATTGGGGAAGGTGGATCTGG+TGG - chr7_3:50635097-50635116 Msa1108060:intron 55.0%
AAGATTGCAGCACACGCCTC+TGG + chr7_3:50635794-50635813 None:intergenic 55.0%
AGGCGTGTGCTGCAATCTTG+TGG - chr7_3:50635795-50635814 Msa1108060:intron 55.0%
ATCAGCATGTGCACCACCGA+GGG + chr7_3:50636250-50636269 None:intergenic 55.0%
GAGTTTCGGAGGCTCAGAAG+AGG + chr7_3:50636618-50636637 None:intergenic 55.0%
! GTCTGAGGCCGCTAAAGCAT+TGG - chr7_3:50636700-50636719 Msa1108060:CDS 55.0%
CGCATCCTCAGCAAGCGATT+TGG - chr7_3:50637051-50637070 Msa1108060:intron 55.0%
AACCAGGACGAGATGGCAAC+GGG - chr7_3:50637173-50637192 Msa1108060:intron 55.0%
!! ACGAGATGGCAACGGGCTTT+TGG - chr7_3:50637180-50637199 Msa1108060:intron 55.0%
AAAGTGGAGGTCGCCAAAGC+TGG - chr7_3:50637298-50637317 Msa1108060:intron 55.0%
CCCCAGAGGTTTCAGACATC+AGG + chr7_3:50637435-50637454 None:intergenic 55.0%
!! GGTGAAGATGGTGCTGACAG+TGG - chr7_3:50638059-50638078 Msa1108060:intron 55.0%
TGAAGCCTTCACCACCAGGC+CGG + chr7_3:50632276-50632295 None:intergenic 60.0%
! GGTCTGAAGCCTTCACCACC+AGG + chr7_3:50632280-50632299 None:intergenic 60.0%
CTGTATGGACGGCCCAACAC+AGG + chr7_3:50632365-50632384 None:intergenic 60.0%
CTGTGTTGGGCCGTCCATAC+AGG - chr7_3:50632363-50632382 Msa1108060:CDS 60.0%
AACCTTGGGAAGGACAGGGC+TGG - chr7_3:50632779-50632798 Msa1108060:CDS 60.0%
AACCAGCCCTGTCCTTCCCA+AGG + chr7_3:50632784-50632803 None:intergenic 60.0%
GAGGTCAGCATATGCCCCAG+GGG + chr7_3:50634899-50634918 None:intergenic 60.0%
! TCTGGTGGTGCCCTTGCCAT+TGG - chr7_3:50635112-50635131 Msa1108060:intron 60.0%
TTCCAATAGGAGCCCCTCGG+TGG - chr7_3:50636234-50636253 Msa1108060:intron 60.0%
TCAGCATGTGCACCACCGAG+GGG + chr7_3:50636249-50636268 None:intergenic 60.0%
GATCAGCATGTGCACCACCG+AGG + chr7_3:50636251-50636270 None:intergenic 60.0%
TGGAGGTCGCCAAAGCTGGA+GGG - chr7_3:50637302-50637321 Msa1108060:intron 60.0%
AAGAGCCTACGGCCTCTGCA+AGG + chr7_3:50637387-50637406 None:intergenic 60.0%
GGCTCATCTAGCGGCAGCAG+CGG - chr7_3:50634327-50634346 Msa1108060:intron 65.0%
CACCACCGAGGGGCTCCTAT+TGG + chr7_3:50636239-50636258 None:intergenic 65.0%
CTGAGGATGCGCTAGCACGC+TGG + chr7_3:50637042-50637061 None:intergenic 65.0%
AGCCCGTTGCCATCTCGTCC+TGG + chr7_3:50637178-50637197 None:intergenic 65.0%
GTGGAGGTCGCCAAAGCTGG+AGG - chr7_3:50637301-50637320 Msa1108060:intron 65.0%
CAGAGCCTTGCAGAGGCCGT+AGG - chr7_3:50637379-50637398 Msa1108060:intron 65.0%
!! CACACGCGTCGGTGTTGCGT+CGG + chr7_3:50637747-50637766 None:intergenic 65.0%
AACCACCAGGCAAGCCGGCC+TGG - chr7_3:50632259-50632278 Msa1108060:CDS 70.0%
! GCAAGCCGGCCTGGTGGTGA+AGG - chr7_3:50632268-50632287 Msa1108060:CDS 70.0%
!! CACCAGGCCGGCTTGCCTGG+TGG + chr7_3:50632264-50632283 None:intergenic 75.0%
CACCAGGCAAGCCGGCCTGG+TGG - chr7_3:50632262-50632281 Msa1108060:CDS 75.0%
!! CACCACCAGGCCGGCTTGCC+TGG + chr7_3:50632267-50632286 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 50631054 50638510 50631054 ID=Msa1108060;Name=Msa1108060
chr7_3 mRNA 50631054 50638510 50631054 ID=Msa1108060-mRNA-1;Parent=Msa1108060;Name=Msa1108060-mRNA-1;_AED=0.10;_eAED=0.10;_QI=377|1|1|1|0.75|0.69|13|443|751
chr7_3 exon 50631054 50631177 50631054 ID=Msa1108060-mRNA-1:exon:10394;Parent=Msa1108060-mRNA-1
chr7_3 exon 50631210 50631527 50631210 ID=Msa1108060-mRNA-1:exon:10393;Parent=Msa1108060-mRNA-1
chr7_3 exon 50632029 50633148 50632029 ID=Msa1108060-mRNA-1:exon:10392;Parent=Msa1108060-mRNA-1
chr7_3 exon 50633244 50633321 50633244 ID=Msa1108060-mRNA-1:exon:10391;Parent=Msa1108060-mRNA-1
chr7_3 exon 50633572 50633640 50633572 ID=Msa1108060-mRNA-1:exon:10390;Parent=Msa1108060-mRNA-1
chr7_3 exon 50633723 50633774 50633723 ID=Msa1108060-mRNA-1:exon:10389;Parent=Msa1108060-mRNA-1
chr7_3 exon 50634379 50634533 50634379 ID=Msa1108060-mRNA-1:exon:10388;Parent=Msa1108060-mRNA-1
chr7_3 exon 50634625 50634739 50634625 ID=Msa1108060-mRNA-1:exon:10387;Parent=Msa1108060-mRNA-1
chr7_3 exon 50635364 50635524 50635364 ID=Msa1108060-mRNA-1:exon:10386;Parent=Msa1108060-mRNA-1
chr7_3 exon 50635659 50635766 50635659 ID=Msa1108060-mRNA-1:exon:10385;Parent=Msa1108060-mRNA-1
chr7_3 exon 50636330 50636404 50636330 ID=Msa1108060-mRNA-1:exon:10384;Parent=Msa1108060-mRNA-1
chr7_3 exon 50636551 50636922 50636551 ID=Msa1108060-mRNA-1:exon:10383;Parent=Msa1108060-mRNA-1
chr7_3 exon 50638182 50638510 50638182 ID=Msa1108060-mRNA-1:exon:10382;Parent=Msa1108060-mRNA-1
chr7_3 five_prime_UTR 50638182 50638510 50638182 ID=Msa1108060-mRNA-1:five_prime_utr;Parent=Msa1108060-mRNA-1
chr7_3 five_prime_UTR 50636875 50636922 50636875 ID=Msa1108060-mRNA-1:five_prime_utr;Parent=Msa1108060-mRNA-1
chr7_3 CDS 50636551 50636874 50636551 ID=Msa1108060-mRNA-1:cds;Parent=Msa1108060-mRNA-1
chr7_3 CDS 50636330 50636404 50636330 ID=Msa1108060-mRNA-1:cds;Parent=Msa1108060-mRNA-1
chr7_3 CDS 50635659 50635766 50635659 ID=Msa1108060-mRNA-1:cds;Parent=Msa1108060-mRNA-1
chr7_3 CDS 50635364 50635524 50635364 ID=Msa1108060-mRNA-1:cds;Parent=Msa1108060-mRNA-1
chr7_3 CDS 50634625 50634739 50634625 ID=Msa1108060-mRNA-1:cds;Parent=Msa1108060-mRNA-1
chr7_3 CDS 50634379 50634533 50634379 ID=Msa1108060-mRNA-1:cds;Parent=Msa1108060-mRNA-1
chr7_3 CDS 50633723 50633774 50633723 ID=Msa1108060-mRNA-1:cds;Parent=Msa1108060-mRNA-1
chr7_3 CDS 50633572 50633640 50633572 ID=Msa1108060-mRNA-1:cds;Parent=Msa1108060-mRNA-1
chr7_3 CDS 50633244 50633321 50633244 ID=Msa1108060-mRNA-1:cds;Parent=Msa1108060-mRNA-1
chr7_3 CDS 50632030 50633148 50632030 ID=Msa1108060-mRNA-1:cds;Parent=Msa1108060-mRNA-1
chr7_3 three_prime_UTR 50632029 50632029 50632029 ID=Msa1108060-mRNA-1:three_prime_utr;Parent=Msa1108060-mRNA-1
chr7_3 three_prime_UTR 50631210 50631527 50631210 ID=Msa1108060-mRNA-1:three_prime_utr;Parent=Msa1108060-mRNA-1
chr7_3 three_prime_UTR 50631054 50631177 50631054 ID=Msa1108060-mRNA-1:three_prime_utr;Parent=Msa1108060-mRNA-1
Gene Sequence

>Msa1108060

ATGGCTTCTTCTTCTGCAACCCTTGCTGGTTCTGCTGCTTCTGATCTTCTGAGGAGTTCGACTGGCGGTTTCACTGGTGTCCCTTTGAGAACCTTGGGAAGGACAGGGCTGGTTTTGAAAAGAAGGGATTTAACAGTTAGTGTTACTGCTAAGTTGAGGAAGGTGAAGAAGAAAGAGTATCCATGGTCTGGTAACCTTGATCCCAATGTTAAAGGTGGGGTGTTGACTCATCTCTCTCCTTTCAAGCCACTCAAAGAGAAGCCAAAGCCGGTCATTTTGGATTTCGAAAAGCCTCTTGTTGATCTGGAAAAGAAGATCAGCGATGTTCGGAAGATGGCAGAGGAAACTGGTTTGGATTTCAGTGATCAGATTCGCTCATTGGAGAATAAGTACCAAAAGGCTTTAAAGAATCTATATACACATCTAACTCCTATACAGAGGGTCAGCATTGCACGACATCCTAACAGGCCAACTTTCCTTGATCACATCTTTAACATAACTGATAAGTTTATGGAACTCCATGGTGATCGAGAAGGTTATGATGATCCTGCTATTGTTACTGGTTTAGGGAGTATAGATGGTAGGACCTACATGTTTATAGGCCACCAAAAGGGTAGAAATACTAAAGAAAGTATAAAGCGTAACTTTGGGATGCCAACTCCACATGGTTATAGGAAAGCTCTACGCATGATGGAATATGCAGATCATCATGGATTCCCAGTAGTTACTTTCATTGACACCCCTGGGGCATATGCTGACCTCAAATCTGAGGAACTTAACCAAGGTGAAGCAATTGCTCATAATTTGAGATCCATGTTTGGTCTGAAGGTGCCAGTTATTTCTATAGTTATTGGGGAAGGTGGATCTGGTGGTGCCCTTGCCATTGGATGCGCTAATAAATTACTCATGCTTGAAAATGCAGTGTTCTATGTTGCCAGTCCAGAGGCGTGTGCTGCAATCTTGTGGAAGAGTTCTAAAGCTGCTCCCAAGGCTGCTAAAAAACTGAAGATTACAGCGACTGAATTGTGCAAATTGAAAGTTGCAGATGGAGTTATACCTGAGCCCCTCGGTGGTGCACATGCTGATCCAAGTTGGACCTCTCAACAGATAAAAATTAAAATCAATGAAGCTATGGATGAACTCACTAAGATGAACACAGAAGACCTGTTAAAACATCGCATGCATAAGTTCCGAAAAATCGGTGGGTTCAAGGAAGGAGTTCCTGTAGATCCCAAGAAAAAAAGAAACATGAAGAAGAGGGATATACCTCCTGAGAAAGTTTCTGATTCTGAATTAGAAGTTCAGATTGAGAAGCTGAAGCAACAAATTTTGAAGTCCTCTTCTGAGCCTCCGAAACTCGATTTAGATGAGGCGATAAAGAAACTGGAAGAGAAACTGGAAAGGGAGGTTGATCAAGAATTGTCTGAGGCCGCTAAAGCATTGGGCTTAACAGAAAGTTTGTCGAAACTACGTGATGAATTTTCAAAAGCAAGTTCAGATGACCAACCTATTGATCCATTGCTGAATGGTAAGATAGAAAAACTAAAGGCAGATTTTAATCGAAGGTTGTCAGCAGCTCCTAATGCTAACAAGCTGAAGAAGAAGCATGGCATGTTGAGAGAATTGAATAAACTGAAGCTTCTTCTGTCAGACAGAAACAAGGAGGCCGCAACACTTACGCAACAACTGAAGAAGAAATTTGATGATGTCATGAATAATCCTAGAATAAAGGAAAACTATGAGGCGTTACAGTCTGAAATCCAGCGTGCTAGCGCATCCTCAGCAAGCGATTTGGATGATGAATTGAAGAAGAAAATCATTGCGTTCAATAAGGAGGTAGACTTGCAGGTGGTTAATGTTGTGAAGTCGGTTGGGTTAGATGTTCAGTTAGTAAAACCAGGACGAGATGGCAACGGGCTTTTGGTGCCTCAGATAGAAGAACTAAACAAGGATGTGAAAAAGGAAATTGAAGTTTTGGCAAACTCGTCAACAGATATTAAGAGAATGATGGAGCAATTGAAAGTGGAGGTCGCCAAAGCTGGAGGGACACCAAATTCGGAATCAAAGAATAGAATTGTTGCTTTGACGCAAAAAATAAAGCAGAGCCTTGCAGAGGCCGTAGGCTCTTCTAGTTTGAAAGAGAGATATGAAAACCTGATGTCTGAAACCTCTGGGGATGTAAGTTTGAAAGTAGGAAATGGTCTCACTGATGACGAGTTGAGAGAGAAAGTTGGTGCAAATCGCTCCTTTTCTTAA

Protein sequence

>Msa1108060

MASSSATLAGSAASDLLRSSTGGFTGVPLRTLGRTGLVLKRRDLTVSVTAKLRKVKKKEYPWSGNLDPNVKGGVLTHLSPFKPLKEKPKPVILDFEKPLVDLEKKISDVRKMAEETGLDFSDQIRSLENKYQKALKNLYTHLTPIQRVSIARHPNRPTFLDHIFNITDKFMELHGDREGYDDPAIVTGLGSIDGRTYMFIGHQKGRNTKESIKRNFGMPTPHGYRKALRMMEYADHHGFPVVTFIDTPGAYADLKSEELNQGEAIAHNLRSMFGLKVPVISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSSKAAPKAAKKLKITATELCKLKVADGVIPEPLGGAHADPSWTSQQIKIKINEAMDELTKMNTEDLLKHRMHKFRKIGGFKEGVPVDPKKKRNMKKRDIPPEKVSDSELEVQIEKLKQQILKSSSEPPKLDLDEAIKKLEEKLEREVDQELSEAAKALGLTESLSKLRDEFSKASSDDQPIDPLLNGKIEKLKADFNRRLSAAPNANKLKKKHGMLRELNKLKLLLSDRNKEAATLTQQLKKKFDDVMNNPRIKENYEALQSEIQRASASSASDLDDELKKKIIAFNKEVDLQVVNVVKSVGLDVQLVKPGRDGNGLLVPQIEELNKDVKKEIEVLANSSTDIKRMMEQLKVEVAKAGGTPNSESKNRIVALTQKIKQSLAEAVGSSSLKERYENLMSETSGDVSLKVGNGLTDDELREKVGANRSFS*