AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1063850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1063850 MtrunA17_Chr7g0241651 91.689 746 48 3 15 751 15 755 0.0 1330
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1063850 AT2G38040.1 60.705 738 256 11 1 719 4 726 0.0 876
Msa1063850 AT2G38040.2 60.705 738 256 11 1 719 4 726 0.0 876

Find 199 sgRNAs with CRISPR-Local

Find 479 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATTCTTTGATTCCGAATT+TGG 0.097093 7_2:+56053499 None:intergenic
CCTGCTATTGTTACTGGTTT+AGG 0.157647 7_2:-56056730 Msa1063850:CDS
CTTTAGTATTTCTACCCTTT+TGG 0.213712 7_2:+56056671 None:intergenic
CTGCTATTGTTACTGGTTTA+GGG 0.223138 7_2:-56056729 Msa1063850:CDS
TCCTCTTCTGCAACTCTTGC+TGG 0.228752 7_2:-56058109 Msa1063850:CDS
GATGATCCTGCTATTGTTAC+TGG 0.229959 7_2:-56056736 Msa1063850:CDS
GAAGCCAAAGCCGGTCATTT+TGG 0.247758 7_2:-56057858 Msa1063850:CDS
CCAGTTATTTCTATAGTTAT+TGG 0.269049 7_2:-56055733 Msa1063850:CDS
CAGTTATTTCTATAGTTATT+GGG 0.280842 7_2:-56055732 Msa1063850:CDS
ACTAAACAAGGATGTGAAAA+AGG 0.281837 7_2:-56053608 Msa1063850:CDS
CGAAAAGCCTCTTGTTGATC+TGG 0.302936 7_2:-56057831 Msa1063850:CDS
CAGTGATCAGATTCGCTCAT+TGG 0.305709 7_2:-56057614 Msa1063850:CDS
TAACTCAAACAAATACAAAA+TGG 0.309765 7_2:+56052569 None:intergenic
CGCATCCTCAGCAAGCGATT+TGG 0.313461 7_2:-56053776 Msa1063850:CDS
GTGTTGTTGAAATAATTATA+AGG 0.321274 7_2:+56059479 None:intergenic
CCATTCAGCAATGGATCAAT+AGG 0.322029 7_2:+56054042 None:intergenic
AACCTTGATCCCAATGTTAA+AGG 0.325787 7_2:-56057923 Msa1063850:CDS
ACGAGATGGCAACGAGCTTT+TGG 0.331198 7_2:-56053647 Msa1063850:CDS
AAATCCAAAATGACCGGCTT+TGG 0.343249 7_2:+56057854 None:intergenic
TTCATTCTTTCACACACATT+TGG 0.345283 7_2:-56059617 Msa1063850:five_prime_UTR
GAAAGTATAAAGCGTAACTT+TGG 0.347984 7_2:-56056649 Msa1063850:CDS
CCCCAGAGGTTTCAGACATC+AGG 0.360996 7_2:+56053395 None:intergenic
TCAAGGAAAGTTGGCCTGTT+AGG 0.363340 7_2:+56056951 None:intergenic
AAAGAAACTGGAAGAGAAAC+TGG 0.369228 7_2:-56054172 Msa1063850:CDS
TTCTTCAGCTTGTTAGCATT+AGG 0.371644 7_2:+56053970 None:intergenic
CATGAATAATCCTAGAATAA+AGG 0.371751 7_2:-56053839 Msa1063850:CDS
AGGAGTGTGATAAGGAAATA+TGG 0.373816 7_2:-56058134 Msa1063850:exon
GTGAAAGAATGAATAGTTAG+AGG 0.378805 7_2:+56059627 None:intergenic
GAAAATCATTGCGTTCAATA+AGG 0.380574 7_2:-56053737 Msa1063850:CDS
CGGAAGATGGCAGAGGAAAC+TGG 0.382674 7_2:-56057646 Msa1063850:CDS
GAGAGAGTTGTTAATATTGT+TGG 0.382743 7_2:+56059545 None:intergenic
CACCTTTAACATTGGGATCA+AGG 0.383060 7_2:+56057921 None:intergenic
CAATAAGGAGGTAGACTTGC+AGG 0.384155 7_2:-56053722 Msa1063850:CDS
ATTTGGTGTCCCTCCAGCTT+TGG 0.385342 7_2:+56053516 None:intergenic
GGTAGGACCTACATGTTTAT+AGG 0.394998 7_2:-56056697 Msa1063850:CDS
CCAATAACTATAGAAATAAC+TGG 0.397560 7_2:+56055733 None:intergenic
GAGATGAATGAATGAGAGAT+TGG 0.401192 7_2:+56059575 None:intergenic
GATGGCAGAGGAAACTGGTT+TGG 0.413460 7_2:-56057641 Msa1063850:CDS
CATAATTTGAGATCCATGTT+TGG 0.415282 7_2:-56055766 Msa1063850:CDS
AGATGAGGCGATAAAGAAAC+TGG 0.418414 7_2:-56054184 Msa1063850:CDS
ACTGGTTTAGGGAGTATAGA+TGG 0.423701 7_2:-56056718 Msa1063850:CDS
AGCTGGAGGGACACCAAATT+CGG 0.428121 7_2:-56053512 Msa1063850:CDS
GGTGTTCCTTTGAGAACCTT+GGG 0.428985 7_2:-56058040 Msa1063850:CDS
GGTTAAGTTCCTCAGATTTG+AGG 0.430996 7_2:+56055897 None:intergenic
GTTATTGGGGAAGGTGGATC+TGG 0.432236 7_2:-56055718 Msa1063850:CDS
TGTTGTTGAAATAATTATAA+GGG 0.434114 7_2:+56059480 None:intergenic
GTCTGAGGCCGCTAAAGCAT+TGG 0.441183 7_2:-56054127 Msa1063850:CDS
CAACACCCCACCTTTAACAT+TGG 0.442532 7_2:+56057913 None:intergenic
TTGAGAACCTTGGGAAGGAC+AGG 0.442756 7_2:-56058031 Msa1063850:CDS
AAAGTGGAGGTCGCCAAAGC+TGG 0.442807 7_2:-56053529 Msa1063850:CDS
GCATTGCACGACATCCTAAC+AGG 0.443350 7_2:-56056965 Msa1063850:CDS
GCAATGCTGACCCTCTGTAT+AGG 0.444927 7_2:+56056981 None:intergenic
TCTGGTGGTGCCCTTGCCAT+TGG 0.444951 7_2:-56055700 Msa1063850:CDS
TCTGAGGCCGCTAAAGCATT+GGG 0.445067 7_2:-56054126 Msa1063850:CDS
AAGATTGCAGCACACGCCTC+TGG 0.445070 7_2:+56055036 None:intergenic
GTTAATGTTGTGAAGTCGGT+TGG 0.448137 7_2:-56053697 Msa1063850:CDS
TGTTAAGCCCAATGCTTTAG+CGG 0.448616 7_2:+56054119 None:intergenic
GCCTCATCTAAATCGAGTTT+CGG 0.448664 7_2:+56054198 None:intergenic
GAGTTTGAAGGAGTGTGATA+AGG 0.454220 7_2:-56058142 Msa1063850:five_prime_UTR
AGTTCGACTGGCGGTTTCAC+TGG 0.456175 7_2:-56058061 Msa1063850:CDS
TTCTCTTTGAGTGGCTTGAA+AGG 0.456237 7_2:+56057878 None:intergenic
AACACCCCACCTTTAACATT+GGG 0.457049 7_2:+56057914 None:intergenic
ACCTGATGTCTGAAACCTCT+GGG 0.457541 7_2:-56053396 Msa1063850:CDS
ATCTGTTGAGAGGTCCAACT+TGG 0.458156 7_2:+56054557 None:intergenic
AGATGAATGAATGAGAGATT+GGG 0.461617 7_2:+56059576 None:intergenic
ACCAGCAAGAGTTGCAGAAG+AGG 0.467780 7_2:+56058108 None:intergenic
GTTGAACTCACATTAAGAAA+AGG 0.472332 7_2:+56053303 None:intergenic
AGCTCGTTGCCATCTCGTCC+TGG 0.474435 7_2:+56053652 None:intergenic
GTACAAGTGGCTGAAGATAT+TGG 0.474915 7_2:+56052719 None:intergenic
GTGTCAATGAAAGTAACTAC+TGG 0.476868 7_2:+56055938 None:intergenic
TTGGATCTCTACTCAATCAC+TGG 0.479855 7_2:-56059423 Msa1063850:intron
AAGAAAGAGTATCCATGGTC+TGG 0.483621 7_2:-56057947 Msa1063850:CDS
AACCTGATGTCTGAAACCTC+TGG 0.484029 7_2:-56053397 Msa1063850:CDS
CATCTTTAACATAACTGATA+AGG 0.485279 7_2:-56056925 Msa1063850:intron
GTTACTTTCATTGACACCCC+TGG 0.490262 7_2:-56055932 Msa1063850:CDS
TCAGAATCAGAAACTTTCTC+AGG 0.495099 7_2:+56054279 None:intergenic
AATGATGGAGCAATTGAAAG+TGG 0.495125 7_2:-56053545 Msa1063850:CDS
GGAAGTTTGAAAGTAGGAAA+TGG 0.497527 7_2:-56053370 Msa1063850:CDS
TGGTGTTCCTTTGAGAACCT+TGG 0.497984 7_2:-56058041 Msa1063850:CDS
TTACTTTCATTGACACCCCT+GGG 0.498078 7_2:-56055931 Msa1063850:CDS
GGCTTTGGCTTCTCTTTGAG+TGG 0.498440 7_2:+56057869 None:intergenic
CATGTTTATAGGCCACCAAA+AGG 0.499286 7_2:-56056686 Msa1063850:CDS
AAGATGTGATCAAGGAAAGT+TGG 0.499589 7_2:+56056942 None:intergenic
CAGAGCCTTGCAGAGGCCGT+AGG 0.500417 7_2:-56053448 Msa1063850:CDS
ATTGGAGAATAAGTACCAAA+AGG 0.500470 7_2:-56057596 Msa1063850:intron
AATTAAAATCAATGAAGCTA+TGG 0.503820 7_2:-56054531 Msa1063850:CDS
TCTATAGTTATTGGGGAAGG+TGG 0.505891 7_2:-56055724 Msa1063850:CDS
AAAGTATAAAGCGTAACTTT+GGG 0.506447 7_2:-56056648 Msa1063850:CDS
TTGAGAACAGGTTCGGAAGA+TGG 0.510369 7_2:-56057659 Msa1063850:intron
TTGTTTAGTTCTTCTATCTG+AGG 0.510370 7_2:+56053622 None:intergenic
GAGATCCATGTTTGGTCTGA+AGG 0.512636 7_2:-56055758 Msa1063850:CDS
CCTATTGATCCATTGCTGAA+TGG 0.516317 7_2:-56054042 Msa1063850:CDS
GAAATGTATGGCCATGATGC+TGG 0.517647 7_2:+56052691 None:intergenic
TCATGTGGAGTTGGTGAAGA+TGG 0.522794 7_2:-56052789 Msa1063850:three_prime_UTR
CTGCTGCTTCTGATCTTCTG+AGG 0.528168 7_2:-56058084 Msa1063850:CDS
TTATGTTAAAGATGTGATCA+AGG 0.532154 7_2:+56056934 None:intergenic
CCTAAACCAGTAACAATAGC+AGG 0.532918 7_2:+56056730 None:intergenic
TAGAATAAAGGAAAACTATG+AGG 0.534393 7_2:-56053827 Msa1063850:CDS
AACAGATATTAAGAGAATGA+TGG 0.535873 7_2:-56053560 Msa1063850:CDS
TTGGTGGCCTATAAACATGT+AGG 0.538172 7_2:+56056690 None:intergenic
TAGGAAAGCTCTACGCATGA+TGG 0.538333 7_2:-56055984 Msa1063850:CDS
TTAATGTTGTGAAGTCGGTT+GGG 0.540162 7_2:-56053696 Msa1063850:CDS
TTGAGGTCAGCATATGCCCC+AGG 0.543733 7_2:+56055914 None:intergenic
CAGTTGTTGCGTAAGTGTTG+CGG 0.544001 7_2:+56053882 None:intergenic
TGGCACCTTCAGACCAAACA+TGG 0.545741 7_2:+56055753 None:intergenic
ATCAGCATGTGCACCACCGA+GGG 0.548379 7_2:+56054580 None:intergenic
TGAAGAAGAAAGAGTATCCA+TGG 0.548999 7_2:-56057952 Msa1063850:CDS
ATGTCTGAAACCTCTGGGGA+TGG 0.551656 7_2:-56053391 Msa1063850:CDS
ATGGAATATGCAGATCATCA+TGG 0.552837 7_2:-56055965 Msa1063850:CDS
TTTCAAGCTAGAAGAGCCTA+CGG 0.553369 7_2:+56053432 None:intergenic
TGGACATACCCATGTGGAGT+TGG 0.554403 7_2:+56056622 None:intergenic
TTGCAGTTTATGGAACTCCA+TGG 0.555261 7_2:-56056775 Msa1063850:intron
AACCTTGGGAAGGACAGGGC+TGG 0.556563 7_2:-56058026 Msa1063850:CDS
ATTGGGGAAGGTGGATCTGG+TGG 0.559129 7_2:-56055715 Msa1063850:CDS
GATCTTCTGAGGAGTTCGAC+TGG 0.560887 7_2:-56058073 Msa1063850:CDS
GTAGTAAGTATTGTTGTGGT+GGG 0.561236 7_2:-56059746 None:intergenic
ATTTCTATAGTTATTGGGGA+AGG 0.562173 7_2:-56055727 Msa1063850:CDS
GGGGATGGAAGTTTGAAAGT+AGG 0.564045 7_2:-56053376 Msa1063850:CDS
TTTCTCTCTCAACTCGTCAT+CGG 0.564143 7_2:+56053342 None:intergenic
TATTAGCGCATCCAATGGCA+AGG 0.566745 7_2:+56055689 None:intergenic
TTGATCCCAATGTTAAAGGT+GGG 0.568886 7_2:-56057919 Msa1063850:CDS
TTCCTTTGAGAACCTTGGGA+AGG 0.571275 7_2:-56058036 Msa1063850:CDS
AGTTATTTCTATAGTTATTG+GGG 0.571294 7_2:-56055731 Msa1063850:CDS
TGCAAATTGAAAGTTGCAGA+TGG 0.571774 7_2:-56054867 Msa1063850:CDS
GAGTTCTAAAGCTGCTCCCA+AGG 0.573415 7_2:-56055007 Msa1063850:intron
ATGCAGTGTTCTATGTTGCC+AGG 0.573587 7_2:-56055648 Msa1063850:intron
TTCGTGGAGATCGTCAATGA+AGG 0.576001 7_2:+56059511 None:intergenic
AACTGGAAGAGAAACTGGAA+AGG 0.576046 7_2:-56054167 Msa1063850:CDS
TGAAAGAATGAATAGTTAGA+GGG 0.577422 7_2:+56059628 None:intergenic
CTTGATCCCAATGTTAAAGG+TGG 0.579720 7_2:-56057920 Msa1063850:CDS
TCTATCTTACCATTCAGCAA+TGG 0.580411 7_2:+56054033 None:intergenic
GTGGAGGTCGCCAAAGCTGG+AGG 0.581724 7_2:-56053526 Msa1063850:CDS
GAATGCTGCTCATGTGGAGT+TGG 0.585199 7_2:-56052798 Msa1063850:three_prime_UTR
TTGTACATCATCCAGCATCA+TGG 0.585215 7_2:-56052702 Msa1063850:three_prime_UTR
ACTCAAAGAGAAGCCAAAGC+CGG 0.586838 7_2:-56057867 Msa1063850:CDS
GATGAATGAATGAGAGATTG+GGG 0.586906 7_2:+56059577 None:intergenic
TTAGTAAAACCAGGACGAGA+TGG 0.587670 7_2:-56053661 Msa1063850:CDS
TTTGGGATGCCAACTCCACA+TGG 0.588251 7_2:-56056631 Msa1063850:CDS
GTCAGAGAATGCTGCTCATG+TGG 0.589684 7_2:-56052804 Msa1063850:intron
TCAGCAATGGATCAATAGGT+TGG 0.591042 7_2:+56054046 None:intergenic
CTTCTGAGGAGTTCGACTGG+CGG 0.591267 7_2:-56058070 Msa1063850:CDS
GTCCTTCCCAAGGTTCTCAA+AGG 0.591322 7_2:+56058034 None:intergenic
AGGCGTGTGCTGCAATCTTG+TGG 0.591336 7_2:-56055032 Msa1063850:CDS
TGTTACTGCTAAGTTGAGGA+AGG 0.592738 7_2:-56057975 Msa1063850:CDS
GAATCAGAAACTTTCTCAGG+AGG 0.593450 7_2:+56054282 None:intergenic
ATATACAGCCACACTTCGCA+TGG 0.594775 7_2:+56052633 None:intergenic
ATGTTTATAGGCCACCAAAA+GGG 0.597100 7_2:-56056685 Msa1063850:CDS
GACGAGTTGAGAGAGAAAGT+TGG 0.597575 7_2:-56053337 Msa1063850:CDS
AACCAGCCCTGTCCTTCCCA+AGG 0.598935 7_2:+56058024 None:intergenic
GGTGGTTAATGTTGTGAAGT+CGG 0.601364 7_2:-56053701 Msa1063850:CDS
TGAGAACCTTGGGAAGGACA+GGG 0.604097 7_2:-56058030 Msa1063850:CDS
TGTCAATGAAAGTAACTACT+GGG 0.607100 7_2:+56055939 None:intergenic
AAAATCGGTGGGTTCAAGGA+AGG 0.607904 7_2:-56054354 Msa1063850:CDS
TGAGGTCAGCATATGCCCCA+GGG 0.609072 7_2:+56055915 None:intergenic
ACAGGTTCGGAAGATGGCAG+AGG 0.609168 7_2:-56057653 Msa1063850:intron
TAATTTATTAGCGCATCCAA+TGG 0.611684 7_2:+56055684 None:intergenic
ATCATCCAAATCGCTTGCTG+AGG 0.612600 7_2:+56053771 None:intergenic
TGATCCCAATGTTAAAGGTG+GGG 0.614480 7_2:-56057918 Msa1063850:CDS
ACTGGAAGAGAAACTGGAAA+GGG 0.617331 7_2:-56054166 Msa1063850:CDS
AACAAGCTGAAGAAGAAGCA+TGG 0.620631 7_2:-56053961 Msa1063850:CDS
GAACTCCATGGTGATCGAGA+AGG 0.624613 7_2:-56056763 Msa1063850:CDS
TGGAGGTCGCCAAAGCTGGA+GGG 0.627204 7_2:-56053525 Msa1063850:CDS
ACATCTAACTCCTATACAGA+GGG 0.627693 7_2:-56056991 Msa1063850:CDS
GTGCACATGCTGATCCAAGT+TGG 0.629050 7_2:-56054571 Msa1063850:CDS
GATGTTCAGTTAGTAAAACC+AGG 0.630796 7_2:-56053670 Msa1063850:CDS
TTCCAATAGGAGCCCCTCGG+TGG 0.630832 7_2:-56054593 Msa1063850:intron
ATTAGCGCATCCAATGGCAA+GGG 0.632392 7_2:+56055690 None:intergenic
AAGAGCCTACGGCCTCTGCA+AGG 0.633658 7_2:+56053443 None:intergenic
GTTTAGGGAGTATAGATGGT+AGG 0.635023 7_2:-56056714 Msa1063850:CDS
AAGATAATAACATGATGTTG+TGG 0.637488 7_2:-56052417 Msa1063850:three_prime_UTR
GGATCAAGGTTACCAGACCA+TGG 0.639384 7_2:+56057935 None:intergenic
AATCATTGCGTTCAATAAGG+AGG 0.642813 7_2:-56053734 Msa1063850:CDS
GCTTCTGTCAGACAGAAACA+AGG 0.643125 7_2:-56053908 Msa1063850:CDS
TCATCTAAATCGAGTTTCGG+AGG 0.646059 7_2:+56054201 None:intergenic
TATTACGTGATTTAGTCCAG+AGG 0.647057 7_2:-56055052 Msa1063850:intron
ATATGCTGACCTCAAATCTG+AGG 0.648116 7_2:-56055906 Msa1063850:CDS
ATGAGATACCATGCGAAGTG+TGG 0.649672 7_2:-56052641 Msa1063850:three_prime_UTR
TCCGAAACTCGATTTAGATG+AGG 0.652577 7_2:-56054199 Msa1063850:CDS
GAGTTTCGGAGGCTCAGAAG+AGG 0.652851 7_2:+56054212 None:intergenic
GGAAGAGAAACTGGAAAGGG+AGG 0.655471 7_2:-56054163 Msa1063850:CDS
AATAAAGCAGAGCCTTGCAG+AGG 0.662404 7_2:-56053455 Msa1063850:CDS
GGTGAAGATGGTGCTGACAG+TGG 0.662968 7_2:-56052777 Msa1063850:three_prime_UTR
CATAACCTTCTCGATCACCA+TGG 0.668344 7_2:+56056758 None:intergenic
TTAGTGTTACTGCTAAGTTG+AGG 0.669331 7_2:-56057979 Msa1063850:CDS
TCAGATAGAAGAACTAAACA+AGG 0.670049 7_2:-56053620 Msa1063850:CDS
GATCAGCATGTGCACCACCG+AGG 0.670304 7_2:+56054579 None:intergenic
CACATCTAACTCCTATACAG+AGG 0.673529 7_2:-56056992 Msa1063850:CDS
TTGGGATGCCAACTCCACAT+GGG 0.681170 7_2:-56056630 Msa1063850:intron
GATGCTGGATGATGTACAAG+TGG 0.683716 7_2:+56052706 None:intergenic
TCAGCATGTGCACCACCGAG+GGG 0.685493 7_2:+56054581 None:intergenic
TACTTTCATTGACACCCCTG+GGG 0.686879 7_2:-56055930 Msa1063850:CDS
GGTTGATCAAGAATTGTCTG+AGG 0.689586 7_2:-56054142 Msa1063850:CDS
TTTCAAACTTCCATCCCCAG+AGG 0.689826 7_2:+56053381 None:intergenic
GATGGAGCAATTGAAAGTGG+AGG 0.703918 7_2:-56053542 Msa1063850:CDS
GAGGTCAGCATATGCCCCAG+GGG 0.708544 7_2:+56055916 None:intergenic
TAAGGAGGTAGACTTGCAGG+TGG 0.724305 7_2:-56053719 Msa1063850:CDS
CCTGATGTCTGAAACCTCTG+GGG 0.731070 7_2:-56053395 Msa1063850:CDS
TTCTAGTGGACATACCCATG+TGG 0.731314 7_2:+56056616 None:intergenic
TCTGTCAGACAGAAACAAGG+AGG 0.753606 7_2:-56053905 Msa1063850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAAATATAATTAAATGC+CGG - chr7_2:56053361-56053380 Msa1063850:CDS 10.0%
!! AAAATTAAACTATAAATTCA+TGG + chr7_2:56053515-56053534 None:intergenic 10.0%
!!! TATAATTAGTTTATTTTTCT+TGG - chr7_2:56053869-56053888 Msa1063850:CDS 10.0%
!!! TAATTGTAATGTTTTTTTAA+TGG - chr7_2:56054399-56054418 Msa1063850:CDS 10.0%
!! TCGATTATATATTAAAAAAA+AGG + chr7_2:56055868-56055887 None:intergenic 10.0%
!! ATAATTAATAAGATTATTAC+AGG + chr7_2:56057247-56057266 None:intergenic 10.0%
!!! TTTTTATTTTTTTTTCCAAT+AGG - chr7_2:56057475-56057494 Msa1063850:intron 10.0%
!! AAAATATTATTAAGAGATAA+AGG + chr7_2:56059240-56059259 None:intergenic 10.0%
!! AAGGAAAAAAAAAAAAAAAA+AGG + chr7_2:56059588-56059607 None:intergenic 10.0%
!! TGTTGTTGAAATAATTATAA+GGG + chr7_2:56052604-56052623 None:intergenic 15.0%
!! ATATAGTAATTGGATAAAAA+GGG + chr7_2:56052703-56052722 None:intergenic 15.0%
!! ATTAAGCTTAATTAAGTTAA+TGG - chr7_2:56052875-56052894 Msa1063850:intron 15.0%
!! TTAAGCTTAATTAAGTTAAT+GGG - chr7_2:56052876-56052895 Msa1063850:intron 15.0%
!!! GTTTTTAAAAGTTTACTTTT+TGG - chr7_2:56053175-56053194 Msa1063850:intron 15.0%
!!! TCATTTTATTAATGAAGTAA+TGG - chr7_2:56053226-56053245 Msa1063850:intron 15.0%
!! TTTGATATATAATTAGATAC+TGG - chr7_2:56053447-56053466 Msa1063850:CDS 15.0%
!! TATGATATATAATTAGATAC+TGG - chr7_2:56053778-56053797 Msa1063850:CDS 15.0%
!!! TTTATAGATTTTGGTAATTT+GGG - chr7_2:56053911-56053930 Msa1063850:CDS 15.0%
!! AAAAGTGACTAAAATATATT+AGG - chr7_2:56054791-56054810 Msa1063850:intron 15.0%
!! AAAGTGACTAAAATATATTA+GGG - chr7_2:56054792-56054811 Msa1063850:intron 15.0%
!! ATTAGTATACGTAAAATAAA+AGG - chr7_2:56054920-56054939 Msa1063850:intron 15.0%
!! TAATAGTTATTCATATTTCA+TGG - chr7_2:56054947-56054966 Msa1063850:intron 15.0%
!!! TTGCATTCTTATATTTTAAT+TGG - chr7_2:56055231-56055250 Msa1063850:intron 15.0%
!! ATTATAAAACTTGAAAATGA+TGG + chr7_2:56056476-56056495 None:intergenic 15.0%
!! TATATACATATATATACCTT+GGG + chr7_2:56057093-56057112 None:intergenic 15.0%
!! TATATATGTATATACAAAAC+TGG - chr7_2:56057099-56057118 Msa1063850:intron 15.0%
!!! ATTATTTATTTTATCTTTGC+AGG - chr7_2:56057156-56057175 Msa1063850:intron 15.0%
!! TGATAATTTATATCAAACTT+TGG - chr7_2:56057631-56057650 Msa1063850:CDS 15.0%
!!! TATCTCTTAATAATATTTTG+TGG - chr7_2:56059241-56059260 Msa1063850:intron 15.0%
!!! GTGTTGTTGAAATAATTATA+AGG + chr7_2:56052605-56052624 None:intergenic 20.0%
!! GATATAGTAATTGGATAAAA+AGG + chr7_2:56052704-56052723 None:intergenic 20.0%
!! AATGAACATGATATAGTAAT+TGG + chr7_2:56052713-56052732 None:intergenic 20.0%
!! AAAACCCAAAATCAAAAAAT+GGG + chr7_2:56052817-56052836 None:intergenic 20.0%
!! AAAAACCCAAAATCAAAAAA+TGG + chr7_2:56052818-56052837 None:intergenic 20.0%
!!! TTTTGTTGATTCTTTTTCAT+TGG - chr7_2:56052834-56052853 Msa1063850:intron 20.0%
!!! CTAGTTAAAAGTTTTGTTTT+TGG - chr7_2:56052899-56052918 Msa1063850:intron 20.0%
!! ATTAAGCTTAATTAAGTTCA+TGG - chr7_2:56053151-56053170 Msa1063850:intron 20.0%
!! TTAAGCTTAATTAAGTTCAT+GGG - chr7_2:56053152-56053171 Msa1063850:intron 20.0%
!!! TTTTTTTGAAAGATTCTTCT+GGG - chr7_2:56053295-56053314 Msa1063850:intron 20.0%
!!! TAACTTTTTTTGTGAAAACT+CGG + chr7_2:56053747-56053766 None:intergenic 20.0%
!! AATTACCAAAATCTATAAAC+AGG + chr7_2:56053910-56053929 None:intergenic 20.0%
!!! GTTTATAGATTTTGGTAATT+TGG - chr7_2:56053910-56053929 Msa1063850:CDS 20.0%
!!! TTATAGATTTTGGTAATTTG+GGG - chr7_2:56053912-56053931 Msa1063850:CDS 20.0%
!!! GTATAAGAGTATATTTTTCA+AGG - chr7_2:56054370-56054389 Msa1063850:CDS 20.0%
!! AATTTGATTACTTGAATGAT+AGG - chr7_2:56054545-56054564 Msa1063850:CDS 20.0%
!!! CTTTTATCAATTTAAGCAAT+TGG - chr7_2:56054722-56054741 Msa1063850:intron 20.0%
!!! TTTTACGTATACTAATTGTA+AGG + chr7_2:56054916-56054935 None:intergenic 20.0%
!! AAATAAAGAAAGTAACATAG+TGG + chr7_2:56055901-56055920 None:intergenic 20.0%
!!! TTTTCAAATCAAACAGTTAT+AGG - chr7_2:56056078-56056097 Msa1063850:intron 20.0%
!!! GTTATGCTTTATTTATACTT+TGG - chr7_2:56056220-56056239 Msa1063850:intron 20.0%
!!! CAGTTATTTCTATAGTTATT+GGG - chr7_2:56056349-56056368 Msa1063850:intron 20.0%
!!! AGTTATTTCTATAGTTATTG+GGG - chr7_2:56056350-56056369 Msa1063850:intron 20.0%
!!! TCCATTTTCTCAAAATTTTA+CGG - chr7_2:56056704-56056723 Msa1063850:CDS 20.0%
!!! ACAAAACTACGAAATTTTTT+GGG + chr7_2:56056777-56056796 None:intergenic 20.0%
!!! TACAAAACTACGAAATTTTT+TGG + chr7_2:56056778-56056797 None:intergenic 20.0%
!!! ATTTTTCCTCATTTACTAAT+TGG - chr7_2:56056967-56056986 Msa1063850:CDS 20.0%
!!! TTTTTCCTCATTTACTAATT+GGG - chr7_2:56056968-56056987 Msa1063850:CDS 20.0%
!! CTAAATCACGTAATAAATAA+AGG + chr7_2:56057024-56057043 None:intergenic 20.0%
!! GTATATACATATATATACCT+TGG + chr7_2:56057094-56057113 None:intergenic 20.0%
!! ACATACGGAAAAAAAAATTA+CGG + chr7_2:56057279-56057298 None:intergenic 20.0%
!!! TAAACCTTTTAATGTCTATT+TGG - chr7_2:56057323-56057342 Msa1063850:intron 20.0%
!!! TTTAATTTTTATCTGTTGAG+AGG + chr7_2:56057537-56057556 None:intergenic 20.0%
!! AATTAAAATCAATGAAGCTA+TGG - chr7_2:56057550-56057569 Msa1063850:intron 20.0%
!!! TTCATGTTTCTTTTTTTCTT+GGG + chr7_2:56057766-56057785 None:intergenic 20.0%
!!! AACTATCTTACAAATGTTTT+TGG + chr7_2:56059104-56059123 None:intergenic 20.0%
!! ATTAAGAGATAAAGGTTTAA+AGG + chr7_2:56059232-56059251 None:intergenic 20.0%
!! TAACTCAAACAAATACAAAA+TGG + chr7_2:56059515-56059534 None:intergenic 20.0%
!! GTATTCTTCAAAAATAAGTA+GGG + chr7_2:56059721-56059740 None:intergenic 20.0%
!! AGTATTCTTCAAAAATAAGT+AGG + chr7_2:56059722-56059741 None:intergenic 20.0%
! TGAAAGAATGAATAGTTAGA+GGG + chr7_2:56052456-56052475 None:intergenic 25.0%
!!! AACATGTTTCATTGTTGTTT+AGG - chr7_2:56052748-56052767 Msa1063850:three_prime_UTR 25.0%
!!! AATGACCCATTTTTTGATTT+TGG - chr7_2:56052809-56052828 Msa1063850:intron 25.0%
!!! ATGACCCATTTTTTGATTTT+GGG - chr7_2:56052810-56052829 Msa1063850:intron 25.0%
!!! TGTTTTTTAGTATTGCTTTC+TGG - chr7_2:56052956-56052975 Msa1063850:intron 25.0%
!!! GTTTTTTAGTATTGCTTTCT+GGG - chr7_2:56052957-56052976 Msa1063850:intron 25.0%
!!! TTTATGAGTTGATGAATCAA+TGG - chr7_2:56053067-56053086 Msa1063850:intron 25.0%
! AAAACCCAAAATCCAAAAAT+GGG + chr7_2:56053093-56053112 None:intergenic 25.0%
! AAAAACCCAAAATCCAAAAA+TGG + chr7_2:56053094-56053113 None:intergenic 25.0%
! TAAGCTTAATTAAGTTCATG+GGG - chr7_2:56053153-56053172 Msa1063850:intron 25.0%
!!! GTTTTTTTGAAAGATTCTTC+TGG - chr7_2:56053294-56053313 Msa1063850:intron 25.0%
!!! ATAGTTTAATTTTAACCACC+AGG - chr7_2:56053522-56053541 Msa1063850:CDS 25.0%
!!! TATAGATTTTGGTAATTTGG+GGG - chr7_2:56053913-56053932 Msa1063850:CDS 25.0%
! TACTTAAGTGAGAATGAATT+AGG - chr7_2:56054348-56054367 Msa1063850:CDS 25.0%
!!! TTTTTTTAATGGTTGAGAAC+AGG - chr7_2:56054410-56054429 Msa1063850:CDS 25.0%
! ATAACGATTAAATGTTATCC+CGG - chr7_2:56054518-56054537 Msa1063850:intron 25.0%
!! TCAAGTAATCAAATTTTCTC+CGG + chr7_2:56054540-56054559 None:intergenic 25.0%
! TGTATCAATCTTTGATATTG+CGG - chr7_2:56054641-56054660 Msa1063850:intron 25.0%
! AAGCAATTGGATATACTTTA+TGG - chr7_2:56054735-56054754 Msa1063850:intron 25.0%
! TTATGTTAAAGATGTGATCA+AGG + chr7_2:56055150-56055169 None:intergenic 25.0%
! CATCTTTAACATAACTGATA+AGG - chr7_2:56055156-56055175 Msa1063850:intron 25.0%
! AAAGATGAGAATTCTATTAG+AGG + chr7_2:56055278-56055297 None:intergenic 25.0%
! AAAGTATAAAGCGTAACTTT+GGG - chr7_2:56055433-56055452 Msa1063850:intron 25.0%
! AGTATCAATTAGAATTCTAG+TGG + chr7_2:56055482-56055501 None:intergenic 25.0%
!!! AGTAATAATTATTGACTCCT+CGG + chr7_2:56055749-56055768 None:intergenic 25.0%
! TAGTGCGTACAAATAAAAAA+GGG + chr7_2:56055836-56055855 None:intergenic 25.0%
! ATAGTGCGTACAAATAAAAA+AGG + chr7_2:56055837-56055856 None:intergenic 25.0%
! CCAATAACTATAGAAATAAC+TGG + chr7_2:56056351-56056370 None:intergenic 25.0%
!!! CCAGTTATTTCTATAGTTAT+TGG - chr7_2:56056348-56056367 Msa1063850:intron 25.0%
! GAGTTAAAAATTAAATCACC+TGG + chr7_2:56056454-56056473 None:intergenic 25.0%
!! TTTTCTCTGCAAATTATATG+TGG - chr7_2:56056591-56056610 Msa1063850:intron 25.0%
!!! ACCGTAAAATTTTGAGAAAA+TGG + chr7_2:56056708-56056727 None:intergenic 25.0%
! AGTTAATAATGTGCTTATGA+TGG - chr7_2:56056871-56056890 Msa1063850:intron 25.0%
! ATTTAATACGCAGATAAGAT+AGG - chr7_2:56056928-56056947 Msa1063850:CDS 25.0%
! ATTAACCCAATTAGTAAATG+AGG + chr7_2:56056976-56056995 None:intergenic 25.0%
! CATACGGAAAAAAAAATTAC+GGG + chr7_2:56057278-56057297 None:intergenic 25.0%
! AAAGGTTTAAACCATTAAGA+TGG + chr7_2:56057312-56057331 None:intergenic 25.0%
! AACTCCAAATAGACATTAAA+AGG + chr7_2:56057330-56057349 None:intergenic 25.0%
! AACTTGAAAAATGATAACAC+GGG + chr7_2:56057379-56057398 None:intergenic 25.0%
! CAACTTGAAAAATGATAACA+CGG + chr7_2:56057380-56057399 None:intergenic 25.0%
!!! CTTCATGTTTCTTTTTTTCT+TGG + chr7_2:56057767-56057786 None:intergenic 25.0%
! AAAAAAGAAACATGAAGAAG+AGG - chr7_2:56057770-56057789 Msa1063850:intron 25.0%
! AAAAAGAAACATGAAGAAGA+GGG - chr7_2:56057771-56057790 Msa1063850:intron 25.0%
! TGGTAAGATAGAAAAACTAA+AGG - chr7_2:56058059-56058078 Msa1063850:CDS 25.0%
! CATGAATAATCCTAGAATAA+AGG - chr7_2:56058242-56058261 Msa1063850:intron 25.0%
!! TCATAGTTTTCCTTTATTCT+AGG + chr7_2:56058255-56058274 None:intergenic 25.0%
! TAGAATAAAGGAAAACTATG+AGG - chr7_2:56058254-56058273 Msa1063850:intron 25.0%
!! GAAAAAGGAAATTGAAGTTT+TGG - chr7_2:56058488-56058507 Msa1063850:intron 25.0%
! AACAGATATTAAGAGAATGA+TGG - chr7_2:56058521-56058540 Msa1063850:intron 25.0%
!!! GTTTTAATGTAGTATGATCT+TGG - chr7_2:56059121-56059140 Msa1063850:intron 25.0%
! AAGATAATAACATGATGTTG+TGG - chr7_2:56059664-56059683 Msa1063850:five_prime_UTR 25.0%
! TCAATGAATACAGCTCTTTT+CGG + chr7_2:56052391-56052410 None:intergenic 30.0%
GTGAAAGAATGAATAGTTAG+AGG + chr7_2:56052457-56052476 None:intergenic 30.0%
TTCATTCTTTCACACACATT+TGG - chr7_2:56052464-56052483 Msa1063850:intron 30.0%
AGATGAATGAATGAGAGATT+GGG + chr7_2:56052508-56052527 None:intergenic 30.0%
GAGAGAGTTGTTAATATTGT+TGG + chr7_2:56052539-56052558 None:intergenic 30.0%
!!! TATCTTTCTCTCTCCTTTTT+TGG - chr7_2:56052639-56052658 Msa1063850:three_prime_UTR 30.0%
ATTGAGTAGAGATCCAAAAA+AGG + chr7_2:56052655-56052674 None:intergenic 30.0%
!! GAAACATGTTTCTAAGATTG+AGG + chr7_2:56052738-56052757 None:intergenic 30.0%
! TTGTTTAGGAACGTGTTTTA+TGG - chr7_2:56052762-56052781 Msa1063850:three_prime_UTR 30.0%
! TGTTCATTTTCCTCAATGTT+AGG - chr7_2:56052995-56053014 Msa1063850:intron 30.0%
! CTAGACTTTTCATGAAGTAA+TGG - chr7_2:56053416-56053435 Msa1063850:CDS 30.0%
AGGAATTGTTGACACTTAAA+AGG + chr7_2:56053621-56053640 None:intergenic 30.0%
!!! TACTGGTAGTGATCTTTTTT+TGG - chr7_2:56053795-56053814 Msa1063850:CDS 30.0%
!!! ACTGGTAGTGATCTTTTTTT+GGG - chr7_2:56053796-56053815 Msa1063850:CDS 30.0%
! TTCGTCCTGTTTATAGATTT+TGG - chr7_2:56053902-56053921 Msa1063850:CDS 30.0%
! TTTTCGAAATCCAAAATGAC+CGG + chr7_2:56054236-56054255 None:intergenic 30.0%
ATTGGAGAATAAGTACCAAA+AGG - chr7_2:56054485-56054504 Msa1063850:intron 30.0%
! GTTATTACAGTCAAACCTTT+TGG + chr7_2:56054503-56054522 None:intergenic 30.0%
! CAAGTAATCAAATTTTCTCC+GGG + chr7_2:56054539-56054558 None:intergenic 30.0%
!!! TAGGTTTTGAATTGTGATTG+CGG - chr7_2:56054609-56054628 Msa1063850:intron 30.0%
CGGAAAATTGTATATGAATG+TGG - chr7_2:56054661-56054680 Msa1063850:intron 30.0%
!! TGAGAATTTTGGGGAATATA+AGG + chr7_2:56054996-56055015 None:intergenic 30.0%
! TTTAAAGCCTGAAATAGCAA+TGG + chr7_2:56055058-56055077 None:intergenic 30.0%
!!! TTCCTCTTTTTTGCAGTTTA+TGG - chr7_2:56055296-56055315 Msa1063850:intron 30.0%
TTCCATAAACTGCAAAAAAG+AGG + chr7_2:56055301-56055320 None:intergenic 30.0%
!! CTTTAGTATTTCTACCCTTT+TGG + chr7_2:56055413-56055432 None:intergenic 30.0%
! GAAAGTATAAAGCGTAACTT+TGG - chr7_2:56055432-56055451 Msa1063850:intron 30.0%
!! GCTTTAAAATAGGTCCTATT+TGG + chr7_2:56055720-56055739 None:intergenic 30.0%
!!! TCGGTTTTCTGCTTTAAAAT+AGG + chr7_2:56055730-56055749 None:intergenic 30.0%
!!! TATTTTAAAGCAGAAAACCG+AGG - chr7_2:56055729-56055748 Msa1063850:CDS 30.0%
!! ACACTATTTGCTATTTCACT+TGG - chr7_2:56055928-56055947 Msa1063850:CDS 30.0%
! TATTTCACTTGGAGGATTTT+TGG - chr7_2:56055939-56055958 Msa1063850:CDS 30.0%
TCATCTGAATTCATATCATG+TGG + chr7_2:56056001-56056020 None:intergenic 30.0%
TGTCAATGAAAGTAACTACT+GGG + chr7_2:56056145-56056164 None:intergenic 30.0%
GAAAGTCGATCATTATCAAA+CGG + chr7_2:56056270-56056289 None:intergenic 30.0%
! CATAATTTGAGATCCATGTT+TGG - chr7_2:56056315-56056334 Msa1063850:intron 30.0%
ATTTCTATAGTTATTGGGGA+AGG - chr7_2:56056354-56056373 Msa1063850:intron 30.0%
TAATTTATTAGCGCATCCAA+TGG + chr7_2:56056400-56056419 None:intergenic 30.0%
ATTCATCTAACATGCACTAT+TGG + chr7_2:56056546-56056565 None:intergenic 30.0%
! GCTTATGATGGAATTCAATT+TGG - chr7_2:56056883-56056902 Msa1063850:intron 30.0%
!! TTTGGTACAAAAAGCATCTT+AGG - chr7_2:56056901-56056920 Msa1063850:intron 30.0%
TAAATGAGGAAAAATAACGC+AGG + chr7_2:56056962-56056981 None:intergenic 30.0%
!! AATGTTCTGATTTGTTCTAC+TGG - chr7_2:56056993-56057012 Msa1063850:CDS 30.0%
TATGAACTATGCCATCTTAA+TGG - chr7_2:56057298-56057317 Msa1063850:intron 30.0%
! TTGATCTTAACTTTTGACCT+TGG - chr7_2:56057350-56057369 Msa1063850:intron 30.0%
ATGCATAAGTTCCGAAAAAT+CGG - chr7_2:56057712-56057731 Msa1063850:intron 30.0%
!! TAAAGGCAGATTTTAATCGA+AGG - chr7_2:56058076-56058095 Msa1063850:CDS 30.0%
GAAAATCATTGCGTTCAATA+AGG - chr7_2:56058344-56058363 Msa1063850:intron 30.0%
!! TTGTTTAGTTCTTCTATCTG+AGG + chr7_2:56058462-56058481 None:intergenic 30.0%
TCAGATAGAAGAACTAAACA+AGG - chr7_2:56058461-56058480 Msa1063850:intron 30.0%
ACTAAACAAGGATGTGAAAA+AGG - chr7_2:56058473-56058492 Msa1063850:intron 30.0%
CTATTCTTTGATTCCGAATT+TGG + chr7_2:56058585-56058604 None:intergenic 30.0%
GTTGAACTCACATTAAGAAA+AGG + chr7_2:56058781-56058800 None:intergenic 30.0%
AAGGATAGTACATCTTTCAA+TGG + chr7_2:56058882-56058901 None:intergenic 30.0%
! ATCCTTCTAAAAACTTTGCA+TGG - chr7_2:56058896-56058915 Msa1063850:intron 30.0%
ATGCCTTCAATCTTAAGTAT+TGG + chr7_2:56058936-56058955 None:intergenic 30.0%
! CTTAAGATTGAAGGCATATT+TGG - chr7_2:56058939-56058958 Msa1063850:intron 30.0%
! CAGGTAATAATTTGCGAAAA+CGG + chr7_2:56059011-56059030 None:intergenic 30.0%
!! ATTACCTGTGTTTGTTTCTA+TGG - chr7_2:56059023-56059042 Msa1063850:intron 30.0%
TTCATAGCTAACACATATAG+CGG - chr7_2:56059049-56059068 Msa1063850:intron 30.0%
TCTAGTTGAAAACTACATCT+TGG - chr7_2:56059074-56059093 Msa1063850:intron 30.0%
!! GACATTTTCTGAGAAATGTA+TGG + chr7_2:56059405-56059424 None:intergenic 30.0%
TGTTCATCTATGTCTATTCA+GGG + chr7_2:56059625-56059644 None:intergenic 30.0%
ATGTTCATCTATGTCTATTC+AGG + chr7_2:56059626-56059645 None:intergenic 30.0%
GATGAATGAATGAGAGATTG+GGG + chr7_2:56052507-56052526 None:intergenic 35.0%
GAGATGAATGAATGAGAGAT+TGG + chr7_2:56052509-56052528 None:intergenic 35.0%
!!! TATAAGGGTATTTTGCTTCG+TGG + chr7_2:56052589-56052608 None:intergenic 35.0%
GAATCATGTTCCTAACATTG+AGG + chr7_2:56053008-56053027 None:intergenic 35.0%
! ATGAATCAATGGCCCATTTT+TGG - chr7_2:56053078-56053097 Msa1063850:intron 35.0%
!! AATGGCCCATTTTTGGATTT+TGG - chr7_2:56053085-56053104 Msa1063850:intron 35.0%
!! ATGGCCCATTTTTGGATTTT+GGG - chr7_2:56053086-56053105 Msa1063850:intron 35.0%
!!! ACTTTTTGGTGTTTAGATCG+AGG - chr7_2:56053189-56053208 Msa1063850:intron 35.0%
TACTCACAATGATCTTCTTC+TGG - chr7_2:56053271-56053290 Msa1063850:intron 35.0%
ACTCACAATGATCTTCTTCT+GGG - chr7_2:56053272-56053291 Msa1063850:intron 35.0%
!!! CTGGTAGCGATATTTTTTCT+TGG - chr7_2:56053466-56053485 Msa1063850:CDS 35.0%
! TTTTGTGAAAACTCGGTATC+CGG + chr7_2:56053740-56053759 None:intergenic 35.0%
! AGGAGTGTGATAAGGAAATA+TGG - chr7_2:56053947-56053966 Msa1063850:CDS 35.0%
! TTAGTGTTACTGCTAAGTTG+AGG - chr7_2:56054102-56054121 Msa1063850:CDS 35.0%
!! TGAAGAAGAAAGAGTATCCA+TGG - chr7_2:56054129-56054148 Msa1063850:CDS 35.0%
AACCTTGATCCCAATGTTAA+AGG - chr7_2:56054158-56054177 Msa1063850:CDS 35.0%
TTGATCCCAATGTTAAAGGT+GGG - chr7_2:56054162-56054181 Msa1063850:CDS 35.0%
! TTCTTTTCCAGATCAACAAG+AGG + chr7_2:56054260-56054279 None:intergenic 35.0%
TTAATGGTTGAGAACAGGTT+CGG - chr7_2:56054415-56054434 Msa1063850:intron 35.0%
AATATGTGCACAATCTTGCT+AGG - chr7_2:56054590-56054609 Msa1063850:intron 35.0%
TGCAGTCGTAAATCAAAATG+TGG - chr7_2:56054691-56054710 Msa1063850:intron 35.0%
! ATTGTGTTTTCATATCGTGC+TGG - chr7_2:56054838-56054857 Msa1063850:intron 35.0%
ATATTCCCCAAAATTCTCAC+CGG - chr7_2:56054997-56055016 Msa1063850:intron 35.0%
! AGAATTTTACCAGCGTTTAC+CGG + chr7_2:56055019-56055038 None:intergenic 35.0%
ACATCTAACTCCTATACAGA+GGG - chr7_2:56055090-56055109 Msa1063850:intron 35.0%
AAGATGTGATCAAGGAAAGT+TGG + chr7_2:56055142-56055161 None:intergenic 35.0%
GAGAATTCTATTAGAGGTAG+TGG + chr7_2:56055272-56055291 None:intergenic 35.0%
!! CTGCTATTGTTACTGGTTTA+GGG - chr7_2:56055352-56055371 Msa1063850:intron 35.0%
ATGTTTATAGGCCACCAAAA+GGG - chr7_2:56055396-56055415 Msa1063850:intron 35.0%
!! TAGTATTTCTACCCTTTTGG+TGG + chr7_2:56055410-56055429 None:intergenic 35.0%
CATTGCTAACACTTAACAAG+TGG + chr7_2:56055515-56055534 None:intergenic 35.0%
ATTGTCCTAATAGCAAAGCT+AGG + chr7_2:56055554-56055573 None:intergenic 35.0%
!! CTTTGCTATTAGGACAATAG+CGG - chr7_2:56055556-56055575 Msa1063850:intron 35.0%
GCGTACAAATAAAAAAGGGA+TGG + chr7_2:56055832-56055851 None:intergenic 35.0%
GAAATAGCAAATAGTGTTGC+AGG + chr7_2:56055925-56055944 None:intergenic 35.0%
!! CTATTTGCTATTTCACTTGG+AGG - chr7_2:56055931-56055950 Msa1063850:CDS 35.0%
ACCATCTGTCAGTATCAAAT+GGG + chr7_2:56056055-56056074 None:intergenic 35.0%
TACCATCTGTCAGTATCAAA+TGG + chr7_2:56056056-56056075 None:intergenic 35.0%
ATGGAATATGCAGATCATCA+TGG - chr7_2:56056116-56056135 Msa1063850:intron 35.0%
GTGTCAATGAAAGTAACTAC+TGG + chr7_2:56056146-56056165 None:intergenic 35.0%
AGCATAACTAGCAACATACT+TGG + chr7_2:56056208-56056227 None:intergenic 35.0%
!!! TGGCATTGTTTTTGTTACCA+TGG - chr7_2:56056240-56056259 Msa1063850:intron 35.0%
!! CATTATCAAACGGATTACCA+TGG + chr7_2:56056260-56056279 None:intergenic 35.0%
TCTAACATGCACTATTGGAA+GGG + chr7_2:56056541-56056560 None:intergenic 35.0%
ATCTAACATGCACTATTGGA+AGG + chr7_2:56056542-56056561 None:intergenic 35.0%
ACATCATTACAAAGAAGCTC+AGG + chr7_2:56056572-56056591 None:intergenic 35.0%
CTCACTAGCAATCTTATATC+TGG + chr7_2:56056853-56056872 None:intergenic 35.0%
!! TCTGATTTGTTCTACTGGTT+TGG - chr7_2:56056998-56057017 Msa1063850:CDS 35.0%
TATTACGTGATTTAGTCCAG+AGG - chr7_2:56057029-56057048 Msa1063850:intron 35.0%
TGCAAATTGAAAGTTGCAGA+TGG - chr7_2:56057214-56057233 Msa1063850:intron 35.0%
GATGGCATAGTTCATACATA+CGG + chr7_2:56057294-56057313 None:intergenic 35.0%
! GCTATGGATGTAAGTTTTAC+TGG - chr7_2:56057566-56057585 Msa1063850:intron 35.0%
!!! TATGCATGCGATGTTTTAAC+AGG + chr7_2:56057699-56057718 None:intergenic 35.0%
ATAAGTTCCGAAAAATCGGT+GGG - chr7_2:56057716-56057735 Msa1063850:intron 35.0%
!!! CTTTTTTTCTTGGGATCTAC+AGG + chr7_2:56057757-56057776 None:intergenic 35.0%
TCAGAATCAGAAACTTTCTC+AGG + chr7_2:56057805-56057824 None:intergenic 35.0%
AAAGAAACTGGAAGAGAAAC+TGG - chr7_2:56057909-56057928 Msa1063850:CDS 35.0%
TCTATCTTACCATTCAGCAA+TGG + chr7_2:56058051-56058070 None:intergenic 35.0%
!! TTCTTCAGCTTGTTAGCATT+AGG + chr7_2:56058114-56058133 None:intergenic 35.0%
AATCATTGCGTTCAATAAGG+AGG - chr7_2:56058347-56058366 Msa1063850:intron 35.0%
TTAATGTTGTGAAGTCGGTT+GGG - chr7_2:56058385-56058404 Msa1063850:intron 35.0%
GATGTTCAGTTAGTAAAACC+AGG - chr7_2:56058411-56058430 Msa1063850:intron 35.0%
! AATGATGGAGCAATTGAAAG+TGG - chr7_2:56058536-56058555 Msa1063850:intron 35.0%
GGAAGTTTGAAAGTAGGAAA+TGG - chr7_2:56058711-56058730 Msa1063850:intron 35.0%
!! TGCCATGCAAAGTTTTTAGA+AGG + chr7_2:56058901-56058920 None:intergenic 35.0%
GCACCAATACTTAAGATTGA+AGG - chr7_2:56058930-56058949 Msa1063850:intron 35.0%
! GAATACAGCTCTTTTCGGTT+TGG + chr7_2:56052386-56052405 None:intergenic 40.0%
TTGGATCTCTACTCAATCAC+TGG - chr7_2:56052658-56052677 Msa1063850:three_prime_UTR 40.0%
!!! TGTTTTTGGCGTTAAGATCG+AGG - chr7_2:56052913-56052932 Msa1063850:intron 40.0%
CCCAGAAAAATGATCACTAC+CGG + chr7_2:56053383-56053402 None:intergenic 40.0%
!! CCGGTAGTGATCATTTTTCT+GGG - chr7_2:56053380-56053399 Msa1063850:CDS 40.0%
!! ATTTTAACCACCAGGCAATC+CGG - chr7_2:56053530-56053549 Msa1063850:CDS 40.0%
GTGTCAACAATTCCTGTGTT+AGG - chr7_2:56053626-56053645 Msa1063850:CDS 40.0%
AATCCAACCGTTCACTAACA+GGG + chr7_2:56053690-56053709 None:intergenic 40.0%
ATTTGGGGGATTGAGTTTGA+AGG - chr7_2:56053927-56053946 Msa1063850:CDS 40.0%
! GAGTTTGAAGGAGTGTGATA+AGG - chr7_2:56053939-56053958 Msa1063850:CDS 40.0%
!!! AGGGCTGGTTTTGAAAAGAA+GGG - chr7_2:56054070-56054089 Msa1063850:CDS 40.0%
! TGTTACTGCTAAGTTGAGGA+AGG - chr7_2:56054106-56054125 Msa1063850:CDS 40.0%
!! AAGAAAGAGTATCCATGGTC+TGG - chr7_2:56054134-56054153 Msa1063850:CDS 40.0%
CACCTTTAACATTGGGATCA+AGG + chr7_2:56054163-56054182 None:intergenic 40.0%
CTTGATCCCAATGTTAAAGG+TGG - chr7_2:56054161-56054180 Msa1063850:CDS 40.0%
TGATCCCAATGTTAAAGGTG+GGG - chr7_2:56054163-56054182 Msa1063850:CDS 40.0%
AACACCCCACCTTTAACATT+GGG + chr7_2:56054170-56054189 None:intergenic 40.0%
TTCTCTTTGAGTGGCTTGAA+AGG + chr7_2:56054206-56054225 None:intergenic 40.0%
! AAATCCAAAATGACCGGCTT+TGG + chr7_2:56054230-56054249 None:intergenic 40.0%
GGGTATGTTATGTTATGCTG+AGG - chr7_2:56054812-56054831 Msa1063850:intron 40.0%
! TGTTCTGAGTGTTATTCACC+TGG - chr7_2:56054863-56054882 Msa1063850:CDS 40.0%
! GTTTACCGGTGAGAATTTTG+GGG + chr7_2:56055005-56055024 None:intergenic 40.0%
! CGTTTACCGGTGAGAATTTT+GGG + chr7_2:56055006-56055025 None:intergenic 40.0%
!! ACTGTCTCCATTGCTATTTC+AGG - chr7_2:56055048-56055067 Msa1063850:intron 40.0%
CACATCTAACTCCTATACAG+AGG - chr7_2:56055089-56055108 Msa1063850:intron 40.0%
TTGCAGTTTATGGAACTCCA+TGG - chr7_2:56055306-56055325 Msa1063850:intron 40.0%
GATGATCCTGCTATTGTTAC+TGG - chr7_2:56055345-56055364 Msa1063850:intron 40.0%
CCTAAACCAGTAACAATAGC+AGG + chr7_2:56055354-56055373 None:intergenic 40.0%
!! CCTGCTATTGTTACTGGTTT+AGG - chr7_2:56055351-56055370 Msa1063850:intron 40.0%
! ACTGGTTTAGGGAGTATAGA+TGG - chr7_2:56055363-56055382 Msa1063850:intron 40.0%
! GTTTAGGGAGTATAGATGGT+AGG - chr7_2:56055367-56055386 Msa1063850:intron 40.0%
GGTAGGACCTACATGTTTAT+AGG - chr7_2:56055384-56055403 Msa1063850:intron 40.0%
! TTGGTGGCCTATAAACATGT+AGG + chr7_2:56055394-56055413 None:intergenic 40.0%
CATGTTTATAGGCCACCAAA+AGG - chr7_2:56055395-56055414 Msa1063850:intron 40.0%
!! GCTATCCTAGCTTTGCTATT+AGG - chr7_2:56055546-56055565 Msa1063850:intron 40.0%
TGCATGTATGTGTGCCAAAT+AGG - chr7_2:56055703-56055722 Msa1063850:CDS 40.0%
CCACGTATTACTGGGAATAA+AGG + chr7_2:56055772-56055791 None:intergenic 40.0%
CCTTTATTCCCAGTAATACG+TGG - chr7_2:56055769-56055788 Msa1063850:CDS 40.0%
TGAAACGACCACGTATTACT+GGG + chr7_2:56055780-56055799 None:intergenic 40.0%
TTGAAACGACCACGTATTAC+TGG + chr7_2:56055781-56055800 None:intergenic 40.0%
CCATCTGTCAGTATCAAATG+GGG + chr7_2:56056054-56056073 None:intergenic 40.0%
TTACTTTCATTGACACCCCT+GGG - chr7_2:56056150-56056169 Msa1063850:intron 40.0%
ATATGCTGACCTCAAATCTG+AGG - chr7_2:56056175-56056194 Msa1063850:intron 40.0%
GGTTAAGTTCCTCAGATTTG+AGG + chr7_2:56056187-56056206 None:intergenic 40.0%
! TGATCGACTTTCATGTATGC+AGG - chr7_2:56056278-56056297 Msa1063850:intron 40.0%
! GATCGACTTTCATGTATGCA+GGG - chr7_2:56056279-56056298 Msa1063850:intron 40.0%
TCTATAGTTATTGGGGAAGG+TGG - chr7_2:56056357-56056376 Msa1063850:intron 40.0%
TGGAAGGGAAGACAAAAGAA+AGG + chr7_2:56056526-56056545 None:intergenic 40.0%
! AATGATAACACGGGTTACCA+AGG + chr7_2:56057370-56057389 None:intergenic 40.0%
TGAGTTCCTACACAATGAAC+AGG + chr7_2:56057657-56057676 None:intergenic 40.0%
CATAAGTTCCGAAAAATCGG+TGG - chr7_2:56057715-56057734 Msa1063850:intron 40.0%
GAATCAGAAACTTTCTCAGG+AGG + chr7_2:56057802-56057821 None:intergenic 40.0%
TCATCTAAATCGAGTTTCGG+AGG + chr7_2:56057883-56057902 None:intergenic 40.0%
TCCGAAACTCGATTTAGATG+AGG - chr7_2:56057882-56057901 Msa1063850:CDS 40.0%
GCCTCATCTAAATCGAGTTT+CGG + chr7_2:56057886-56057905 None:intergenic 40.0%
AGATGAGGCGATAAAGAAAC+TGG - chr7_2:56057897-56057916 Msa1063850:CDS 40.0%
AACTGGAAGAGAAACTGGAA+AGG - chr7_2:56057914-56057933 Msa1063850:CDS 40.0%
ACTGGAAGAGAAACTGGAAA+GGG - chr7_2:56057915-56057934 Msa1063850:CDS 40.0%
GGTTGATCAAGAATTGTCTG+AGG - chr7_2:56057939-56057958 Msa1063850:CDS 40.0%
TGTTAAGCCCAATGCTTTAG+CGG + chr7_2:56057965-56057984 None:intergenic 40.0%
TCAGCAATGGATCAATAGGT+TGG + chr7_2:56058038-56058057 None:intergenic 40.0%
CCATTCAGCAATGGATCAAT+AGG + chr7_2:56058042-56058061 None:intergenic 40.0%
CCTATTGATCCATTGCTGAA+TGG - chr7_2:56058039-56058058 Msa1063850:CDS 40.0%
AACAAGCTGAAGAAGAAGCA+TGG - chr7_2:56058120-56058139 Msa1063850:exon 40.0%
GGTGGTTAATGTTGTGAAGT+CGG - chr7_2:56058380-56058399 Msa1063850:intron 40.0%
GTTAATGTTGTGAAGTCGGT+TGG - chr7_2:56058384-56058403 Msa1063850:intron 40.0%
TTAGTAAAACCAGGACGAGA+TGG - chr7_2:56058420-56058439 Msa1063850:intron 40.0%
TTTCAAGCTAGAAGAGCCTA+CGG + chr7_2:56058652-56058671 None:intergenic 40.0%
TTTCTCTCTCAACTCGTCAT+CGG + chr7_2:56058742-56058761 None:intergenic 40.0%
TGTCTGACAATGACATGTGT+CGG + chr7_2:56058968-56058987 None:intergenic 40.0%
AGCACCATAGAAACAAACAC+AGG + chr7_2:56059030-56059049 None:intergenic 40.0%
ATGATTGCAGAGAAGAAGTG+AGG - chr7_2:56059151-56059170 Msa1063850:intron 40.0%
GTACAAGTGGCTGAAGATAT+TGG + chr7_2:56059365-56059384 None:intergenic 40.0%
TTGTACATCATCCAGCATCA+TGG - chr7_2:56059379-56059398 Msa1063850:intron 40.0%
CAGGGAAACATTCAAGACTA+AGG + chr7_2:56059607-56059626 None:intergenic 40.0%
TTCGTGGAGATCGTCAATGA+AGG + chr7_2:56052573-56052592 None:intergenic 45.0%
!! GCCGGTAGTGATCATTTTTC+TGG - chr7_2:56053379-56053398 Msa1063850:CDS 45.0%
GCTTTGCTCCGACTTCAATT+GGG - chr7_2:56053662-56053681 Msa1063850:CDS 45.0%
ATCCAACCGTTCACTAACAG+GGG + chr7_2:56053689-56053708 None:intergenic 45.0%
CAATCCAACCGTTCACTAAC+AGG + chr7_2:56053691-56053710 None:intergenic 45.0%
CTGTTAGTGAACGGTTGGAT+TGG - chr7_2:56053689-56053708 Msa1063850:CDS 45.0%
ACCAAAGTCCGACTAATCCA+GGG + chr7_2:56053717-56053736 None:intergenic 45.0%
! TGGTGTTCCTTTGAGAACCT+TGG - chr7_2:56054040-56054059 Msa1063850:CDS 45.0%
! GGTGTTCCTTTGAGAACCTT+GGG - chr7_2:56054041-56054060 Msa1063850:CDS 45.0%
! TTCCTTTGAGAACCTTGGGA+AGG - chr7_2:56054045-56054064 Msa1063850:CDS 45.0%
!!! CAGGGCTGGTTTTGAAAAGA+AGG - chr7_2:56054069-56054088 Msa1063850:CDS 45.0%
CAACACCCCACCTTTAACAT+TGG + chr7_2:56054171-56054190 None:intergenic 45.0%
ACTCAAAGAGAAGCCAAAGC+CGG - chr7_2:56054214-56054233 Msa1063850:CDS 45.0%
CGAAAAGCCTCTTGTTGATC+TGG - chr7_2:56054250-56054269 Msa1063850:CDS 45.0%
CTGTTGTTAGTGTGTGTGTG+TGG - chr7_2:56054309-56054328 Msa1063850:CDS 45.0%
TTGAGAACAGGTTCGGAAGA+TGG - chr7_2:56054422-56054441 Msa1063850:intron 45.0%
CAGTGATCAGATTCGCTCAT+TGG - chr7_2:56054467-56054486 Msa1063850:intron 45.0%
AGTGCAATATGCACAAGTCC+AGG + chr7_2:56054884-56054903 None:intergenic 45.0%
! GCGTTTACCGGTGAGAATTT+TGG + chr7_2:56055007-56055026 None:intergenic 45.0%
AAATTCTCACCGGTAAACGC+TGG - chr7_2:56055007-56055026 Msa1063850:intron 45.0%
! TCAAGGAAAGTTGGCCTGTT+AGG + chr7_2:56055133-56055152 None:intergenic 45.0%
CATAACCTTCTCGATCACCA+TGG + chr7_2:56055326-56055345 None:intergenic 45.0%
! TTCTAGTGGACATACCCATG+TGG + chr7_2:56055468-56055487 None:intergenic 45.0%
CCCCATTTGATACTGACAGA+TGG - chr7_2:56056051-56056070 Msa1063850:intron 45.0%
TAGGAAAGCTCTACGCATGA+TGG - chr7_2:56056097-56056116 Msa1063850:intron 45.0%
! GTTACTTTCATTGACACCCC+TGG - chr7_2:56056149-56056168 Msa1063850:intron 45.0%
TACTTTCATTGACACCCCTG+GGG - chr7_2:56056151-56056170 Msa1063850:intron 45.0%
GAGATCCATGTTTGGTCTGA+AGG - chr7_2:56056323-56056342 Msa1063850:intron 45.0%
ATTAGCGCATCCAATGGCAA+GGG + chr7_2:56056394-56056413 None:intergenic 45.0%
TATTAGCGCATCCAATGGCA+AGG + chr7_2:56056395-56056414 None:intergenic 45.0%
ATGCAGTGTTCTATGTTGCC+AGG - chr7_2:56056433-56056452 Msa1063850:intron 45.0%
!! AAGTGTCGGTACTACAGAGT+TGG + chr7_2:56056617-56056636 None:intergenic 45.0%
! GTACCGACACTTCAGATTGA+TGG - chr7_2:56056625-56056644 Msa1063850:intron 45.0%
! ACGCCATCAATCTGAAGTGT+CGG + chr7_2:56056631-56056650 None:intergenic 45.0%
! TTCGTGTCATTACCGACCAT+CGG + chr7_2:56056656-56056675 None:intergenic 45.0%
TGATCCTTTGCATGCAGCAA+AGG - chr7_2:56057398-56057417 Msa1063850:intron 45.0%
CTATCCTTTGCTGCATGCAA+AGG + chr7_2:56057405-56057424 None:intergenic 45.0%
! TTTTTCCAATAGGAGCCCCT+CGG - chr7_2:56057485-56057504 Msa1063850:intron 45.0%
ATCTGTTGAGAGGTCCAACT+TGG + chr7_2:56057527-56057546 None:intergenic 45.0%
CTTTGGCCTGTTCATTGTGT+AGG - chr7_2:56057648-56057667 Msa1063850:CDS 45.0%
!!! CCTTGAACCCACCGATTTTT+CGG + chr7_2:56057726-56057745 None:intergenic 45.0%
! AAAATCGGTGGGTTCAAGGA+AGG - chr7_2:56057727-56057746 Msa1063850:intron 45.0%
GCTTCTGTCAGACAGAAACA+AGG - chr7_2:56058173-56058192 Msa1063850:intron 45.0%
TCTGTCAGACAGAAACAAGG+AGG - chr7_2:56058176-56058195 Msa1063850:intron 45.0%
! CAGTTGTTGCGTAAGTGTTG+CGG + chr7_2:56058202-56058221 None:intergenic 45.0%
! ATCATCCAAATCGCTTGCTG+AGG + chr7_2:56058313-56058332 None:intergenic 45.0%
CAATAAGGAGGTAGACTTGC+AGG - chr7_2:56058359-56058378 Msa1063850:intron 45.0%
GATGGAGCAATTGAAAGTGG+AGG - chr7_2:56058539-56058558 Msa1063850:intron 45.0%
AATAAAGCAGAGCCTTGCAG+AGG - chr7_2:56058626-56058645 Msa1063850:intron 45.0%
! AACCTGATGTCTGAAACCTC+TGG - chr7_2:56058684-56058703 Msa1063850:intron 45.0%
! ACCTGATGTCTGAAACCTCT+GGG - chr7_2:56058685-56058704 Msa1063850:intron 45.0%
TTTCAAACTTCCATCCCCAG+AGG + chr7_2:56058703-56058722 None:intergenic 45.0%
GGGGATGGAAGTTTGAAAGT+AGG - chr7_2:56058705-56058724 Msa1063850:intron 45.0%
! GACGAGTTGAGAGAGAAAGT+TGG - chr7_2:56058744-56058763 Msa1063850:intron 45.0%
!! TCATGTGGAGTTGGTGAAGA+TGG - chr7_2:56059292-56059311 Msa1063850:intron 45.0%
GATGCTGGATGATGTACAAG+TGG + chr7_2:56059378-56059397 None:intergenic 45.0%
GAAATGTATGGCCATGATGC+TGG + chr7_2:56059393-56059412 None:intergenic 45.0%
ATGAGATACCATGCGAAGTG+TGG - chr7_2:56059440-56059459 Msa1063850:five_prime_UTR 45.0%
ATATACAGCCACACTTCGCA+TGG + chr7_2:56059451-56059470 None:intergenic 45.0%
!! AAGATAAAATAATAATAAAA+CGG - chr7_2:56055677-56055696 Msa1063850:CDS 5.0%
! TCACAGAGGAGCACACTCTT+AGG + chr7_2:56053577-56053596 None:intergenic 50.0%
TTCGAACCTGAGACTCACAG+AGG + chr7_2:56053591-56053610 None:intergenic 50.0%
TGTGTTAGGCCGTCCAAACA+GGG - chr7_2:56053640-56053659 Msa1063850:CDS 50.0%
GGCTTTGCTCCGACTTCAAT+TGG - chr7_2:56053661-56053680 Msa1063850:CDS 50.0%
ACAGGGGACCCAATTGAAGT+CGG + chr7_2:56053673-56053692 None:intergenic 50.0%
TTGGGTCCCCTGTTAGTGAA+CGG - chr7_2:56053680-56053699 Msa1063850:CDS 50.0%
!! GATTGGTCCCCTGGATTAGT+CGG - chr7_2:56053706-56053725 Msa1063850:CDS 50.0%
CCAAAGTCCGACTAATCCAG+GGG + chr7_2:56053716-56053735 None:intergenic 50.0%
GACCAAAGTCCGACTAATCC+AGG + chr7_2:56053718-56053737 None:intergenic 50.0%
!! GGATTAGTCGGACTTTGGTC+CGG - chr7_2:56053718-56053737 Msa1063850:CDS 50.0%
TCCTCTTCTGCAACTCTTGC+TGG - chr7_2:56053972-56053991 Msa1063850:CDS 50.0%
ACCAGCAAGAGTTGCAGAAG+AGG + chr7_2:56053976-56053995 None:intergenic 50.0%
! CTGCTGCTTCTGATCTTCTG+AGG - chr7_2:56053997-56054016 Msa1063850:CDS 50.0%
! GATCTTCTGAGGAGTTCGAC+TGG - chr7_2:56054008-56054027 Msa1063850:CDS 50.0%
GTCCTTCCCAAGGTTCTCAA+AGG + chr7_2:56054050-56054069 None:intergenic 50.0%
TTGAGAACCTTGGGAAGGAC+AGG - chr7_2:56054050-56054069 Msa1063850:CDS 50.0%
TGAGAACCTTGGGAAGGACA+GGG - chr7_2:56054051-56054070 Msa1063850:CDS 50.0%
GGATCAAGGTTACCAGACCA+TGG + chr7_2:56054149-56054168 None:intergenic 50.0%
! GGCTTTGGCTTCTCTTTGAG+TGG + chr7_2:56054215-56054234 None:intergenic 50.0%
! GAAGCCAAAGCCGGTCATTT+TGG - chr7_2:56054223-56054242 Msa1063850:CDS 50.0%
GATGGCAGAGGAAACTGGTT+TGG - chr7_2:56054440-56054459 Msa1063850:intron 50.0%
GCAATGCTGACCCTCTGTAT+AGG + chr7_2:56055103-56055122 None:intergenic 50.0%
GCATTGCACGACATCCTAAC+AGG - chr7_2:56055116-56055135 Msa1063850:intron 50.0%
GAACTCCATGGTGATCGAGA+AGG - chr7_2:56055318-56055337 Msa1063850:intron 50.0%
! TTTGGGATGCCAACTCCACA+TGG - chr7_2:56055450-56055469 Msa1063850:intron 50.0%
TTGGGATGCCAACTCCACAT+GGG - chr7_2:56055451-56055470 Msa1063850:intron 50.0%
TGGACATACCCATGTGGAGT+TGG + chr7_2:56055462-56055481 None:intergenic 50.0%
GTCGCTATACCAGTTTCTGC+TGG - chr7_2:56055578-56055597 Msa1063850:intron 50.0%
CTAGATGAGCCAGCAGAAAC+TGG + chr7_2:56055590-56055609 None:intergenic 50.0%
!! GTTTCTGCTGGCTCATCTAG+CGG - chr7_2:56055590-56055609 Msa1063850:intron 50.0%
TGGCACCTTCAGACCAAACA+TGG + chr7_2:56056331-56056350 None:intergenic 50.0%
GTTATTGGGGAAGGTGGATC+TGG - chr7_2:56056363-56056382 Msa1063850:intron 50.0%
AGTGTCTGTCCTTGCTTCGT+AGG - chr7_2:56056749-56056768 Msa1063850:CDS 50.0%
! TTTTGGGCACCTACGAAGCA+AGG + chr7_2:56056761-56056780 None:intergenic 50.0%
!! GAGTTCTAAAGCTGCTCCCA+AGG - chr7_2:56057074-56057093 Msa1063850:intron 50.0%
GTGCACATGCTGATCCAAGT+TGG - chr7_2:56057510-56057529 Msa1063850:intron 50.0%
! CCGAAAAATCGGTGGGTTCA+AGG - chr7_2:56057723-56057742 Msa1063850:intron 50.0%
GGAAGAGAAACTGGAAAGGG+AGG - chr7_2:56057918-56057937 Msa1063850:CDS 50.0%
! TCTGAGGCCGCTAAAGCATT+GGG - chr7_2:56057955-56057974 Msa1063850:CDS 50.0%
TAAGGAGGTAGACTTGCAGG+TGG - chr7_2:56058362-56058381 Msa1063850:intron 50.0%
! ACGAGATGGCAACGAGCTTT+TGG - chr7_2:56058434-56058453 Msa1063850:intron 50.0%
!! ATTTGGTGTCCCTCCAGCTT+TGG + chr7_2:56058568-56058587 None:intergenic 50.0%
AGCTGGAGGGACACCAAATT+CGG - chr7_2:56058569-56058588 Msa1063850:intron 50.0%
! CCTGATGTCTGAAACCTCTG+GGG - chr7_2:56058686-56058705 Msa1063850:intron 50.0%
! ATGTCTGAAACCTCTGGGGA+TGG - chr7_2:56058690-56058709 Msa1063850:intron 50.0%
GTCAGAGAATGCTGCTCATG+TGG - chr7_2:56059277-56059296 Msa1063850:intron 50.0%
GAATGCTGCTCATGTGGAGT+TGG - chr7_2:56059283-56059302 Msa1063850:intron 50.0%
TGAAGCCTTCACCACCAAGC+CGG + chr7_2:56053552-56053571 None:intergenic 55.0%
TGTGCTCCTCTGTGAGTCTC+AGG - chr7_2:56053582-56053601 Msa1063850:CDS 55.0%
CTGTTTGGACGGCCTAACAC+AGG + chr7_2:56053641-56053660 None:intergenic 55.0%
CTGTGTTAGGCCGTCCAAAC+AGG - chr7_2:56053639-56053658 Msa1063850:CDS 55.0%
GGAGCAAAGCCCTGTTTGGA+CGG + chr7_2:56053652-56053671 None:intergenic 55.0%
AGTCGGAGCAAAGCCCTGTT+TGG + chr7_2:56053656-56053675 None:intergenic 55.0%
GTCCCCTGTTAGTGAACGGT+TGG - chr7_2:56053684-56053703 Msa1063850:CDS 55.0%
!! CCCCTGGATTAGTCGGACTT+TGG - chr7_2:56053713-56053732 Msa1063850:CDS 55.0%
! CTTCTGAGGAGTTCGACTGG+CGG - chr7_2:56054011-56054030 Msa1063850:CDS 55.0%
AGTTCGACTGGCGGTTTCAC+TGG - chr7_2:56054020-56054039 Msa1063850:CDS 55.0%
ACAGGTTCGGAAGATGGCAG+AGG - chr7_2:56054428-56054447 Msa1063850:intron 55.0%
CGGAAGATGGCAGAGGAAAC+TGG - chr7_2:56054435-56054454 Msa1063850:intron 55.0%
TGAGGTCAGCATATGCCCCA+GGG + chr7_2:56056169-56056188 None:intergenic 55.0%
TTGAGGTCAGCATATGCCCC+AGG + chr7_2:56056170-56056189 None:intergenic 55.0%
ATTGGGGAAGGTGGATCTGG+TGG - chr7_2:56056366-56056385 Msa1063850:intron 55.0%
!! CAGATTGATGGCGTGTCCGA+TGG - chr7_2:56056637-56056656 Msa1063850:CDS 55.0%
!! TTGATGGCGTGTCCGATGGT+CGG - chr7_2:56056641-56056660 Msa1063850:CDS 55.0%
AAGATTGCAGCACACGCCTC+TGG + chr7_2:56057048-56057067 None:intergenic 55.0%
AGGCGTGTGCTGCAATCTTG+TGG - chr7_2:56057049-56057068 Msa1063850:intron 55.0%
ATCAGCATGTGCACCACCGA+GGG + chr7_2:56057504-56057523 None:intergenic 55.0%
GAGTTTCGGAGGCTCAGAAG+AGG + chr7_2:56057872-56057891 None:intergenic 55.0%
! GTCTGAGGCCGCTAAAGCAT+TGG - chr7_2:56057954-56057973 Msa1063850:CDS 55.0%
CGCATCCTCAGCAAGCGATT+TGG - chr7_2:56058305-56058324 Msa1063850:intron 55.0%
AAAGTGGAGGTCGCCAAAGC+TGG - chr7_2:56058552-56058571 Msa1063850:intron 55.0%
CCCCAGAGGTTTCAGACATC+AGG + chr7_2:56058689-56058708 None:intergenic 55.0%
!! GGTGAAGATGGTGCTGACAG+TGG - chr7_2:56059304-56059323 Msa1063850:intron 55.0%
AACCACCAGGCAATCCGGCT+TGG - chr7_2:56053535-56053554 Msa1063850:CDS 60.0%
!! GCAATCCGGCTTGGTGGTGA+AGG - chr7_2:56053544-56053563 Msa1063850:CDS 60.0%
!! GAACGGTTGGATTGGTCCCC+TGG - chr7_2:56053697-56053716 Msa1063850:CDS 60.0%
AACCTTGGGAAGGACAGGGC+TGG - chr7_2:56054055-56054074 Msa1063850:CDS 60.0%
AACCAGCCCTGTCCTTCCCA+AGG + chr7_2:56054060-56054079 None:intergenic 60.0%
GAGGTCAGCATATGCCCCAG+GGG + chr7_2:56056168-56056187 None:intergenic 60.0%
! TCTGGTGGTGCCCTTGCCAT+TGG - chr7_2:56056381-56056400 Msa1063850:intron 60.0%
TTCCAATAGGAGCCCCTCGG+TGG - chr7_2:56057488-56057507 Msa1063850:intron 60.0%
TCAGCATGTGCACCACCGAG+GGG + chr7_2:56057503-56057522 None:intergenic 60.0%
GATCAGCATGTGCACCACCG+AGG + chr7_2:56057505-56057524 None:intergenic 60.0%
AGCTCGTTGCCATCTCGTCC+TGG + chr7_2:56058432-56058451 None:intergenic 60.0%
TGGAGGTCGCCAAAGCTGGA+GGG - chr7_2:56058556-56058575 Msa1063850:intron 60.0%
AAGAGCCTACGGCCTCTGCA+AGG + chr7_2:56058641-56058660 None:intergenic 60.0%
CACCAAGCCGGATTGCCTGG+TGG + chr7_2:56053540-56053559 None:intergenic 65.0%
!! CACCAGGCAATCCGGCTTGG+TGG - chr7_2:56053538-56053557 Msa1063850:CDS 65.0%
CACCACCAAGCCGGATTGCC+TGG + chr7_2:56053543-56053562 None:intergenic 65.0%
GGCTCATCTAGCGGCAGCAG+CGG - chr7_2:56055599-56055618 Msa1063850:intron 65.0%
CACCACCGAGGGGCTCCTAT+TGG + chr7_2:56057493-56057512 None:intergenic 65.0%
CTGAGGATGCGCTAGCACGC+TGG + chr7_2:56058296-56058315 None:intergenic 65.0%
GTGGAGGTCGCCAAAGCTGG+AGG - chr7_2:56058555-56058574 Msa1063850:intron 65.0%
CAGAGCCTTGCAGAGGCCGT+AGG - chr7_2:56058633-56058652 Msa1063850:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 56052350 56059753 56052350 ID=Msa1063850;Name=Msa1063850
chr7_2 mRNA 56052350 56059753 56052350 ID=Msa1063850-mRNA-1;Parent=Msa1063850;Name=Msa1063850-mRNA-1;_AED=0.10;_eAED=0.10;_QI=378|1|1|1|0.75|0.61|13|435|751
chr7_2 exon 56052350 56052473 56052350 ID=Msa1063850-mRNA-1:exon:10558;Parent=Msa1063850-mRNA-1
chr7_2 exon 56052512 56052821 56052512 ID=Msa1063850-mRNA-1:exon:10557;Parent=Msa1063850-mRNA-1
chr7_2 exon 56053314 56054433 56053314 ID=Msa1063850-mRNA-1:exon:10556;Parent=Msa1063850-mRNA-1
chr7_2 exon 56054529 56054606 56054529 ID=Msa1063850-mRNA-1:exon:10555;Parent=Msa1063850-mRNA-1
chr7_2 exon 56054857 56054925 56054857 ID=Msa1063850-mRNA-1:exon:10554;Parent=Msa1063850-mRNA-1
chr7_2 exon 56055008 56055059 56055008 ID=Msa1063850-mRNA-1:exon:10553;Parent=Msa1063850-mRNA-1
chr7_2 exon 56055649 56055803 56055649 ID=Msa1063850-mRNA-1:exon:10552;Parent=Msa1063850-mRNA-1
chr7_2 exon 56055895 56056009 56055895 ID=Msa1063850-mRNA-1:exon:10551;Parent=Msa1063850-mRNA-1
chr7_2 exon 56056631 56056791 56056631 ID=Msa1063850-mRNA-1:exon:10550;Parent=Msa1063850-mRNA-1
chr7_2 exon 56056926 56057033 56056926 ID=Msa1063850-mRNA-1:exon:10549;Parent=Msa1063850-mRNA-1
chr7_2 exon 56057597 56057671 56057597 ID=Msa1063850-mRNA-1:exon:10548;Parent=Msa1063850-mRNA-1
chr7_2 exon 56057814 56058185 56057814 ID=Msa1063850-mRNA-1:exon:10547;Parent=Msa1063850-mRNA-1
chr7_2 exon 56059424 56059753 56059424 ID=Msa1063850-mRNA-1:exon:10546;Parent=Msa1063850-mRNA-1
chr7_2 five_prime_UTR 56059424 56059753 56059424 ID=Msa1063850-mRNA-1:five_prime_utr;Parent=Msa1063850-mRNA-1
chr7_2 five_prime_UTR 56058138 56058185 56058138 ID=Msa1063850-mRNA-1:five_prime_utr;Parent=Msa1063850-mRNA-1
chr7_2 CDS 56057814 56058137 56057814 ID=Msa1063850-mRNA-1:cds;Parent=Msa1063850-mRNA-1
chr7_2 CDS 56057597 56057671 56057597 ID=Msa1063850-mRNA-1:cds;Parent=Msa1063850-mRNA-1
chr7_2 CDS 56056926 56057033 56056926 ID=Msa1063850-mRNA-1:cds;Parent=Msa1063850-mRNA-1
chr7_2 CDS 56056631 56056791 56056631 ID=Msa1063850-mRNA-1:cds;Parent=Msa1063850-mRNA-1
chr7_2 CDS 56055895 56056009 56055895 ID=Msa1063850-mRNA-1:cds;Parent=Msa1063850-mRNA-1
chr7_2 CDS 56055649 56055803 56055649 ID=Msa1063850-mRNA-1:cds;Parent=Msa1063850-mRNA-1
chr7_2 CDS 56055008 56055059 56055008 ID=Msa1063850-mRNA-1:cds;Parent=Msa1063850-mRNA-1
chr7_2 CDS 56054857 56054925 56054857 ID=Msa1063850-mRNA-1:cds;Parent=Msa1063850-mRNA-1
chr7_2 CDS 56054529 56054606 56054529 ID=Msa1063850-mRNA-1:cds;Parent=Msa1063850-mRNA-1
chr7_2 CDS 56053315 56054433 56053315 ID=Msa1063850-mRNA-1:cds;Parent=Msa1063850-mRNA-1
chr7_2 three_prime_UTR 56053314 56053314 56053314 ID=Msa1063850-mRNA-1:three_prime_utr;Parent=Msa1063850-mRNA-1
chr7_2 three_prime_UTR 56052512 56052821 56052512 ID=Msa1063850-mRNA-1:three_prime_utr;Parent=Msa1063850-mRNA-1
chr7_2 three_prime_UTR 56052350 56052473 56052350 ID=Msa1063850-mRNA-1:three_prime_utr;Parent=Msa1063850-mRNA-1
Gene Sequence

>Msa1063850

ATGGCTTCCTCTTCTGCAACTCTTGCTGGTTCTGCTGCTTCTGATCTTCTGAGGAGTTCGACTGGCGGTTTCACTGGTGTTCCTTTGAGAACCTTGGGAAGGACAGGGCTGGTTTTGAAAAGAAGGGATTTAACAGTTAGTGTTACTGCTAAGTTGAGGAAGGTGAAGAAGAAAGAGTATCCATGGTCTGGTAACCTTGATCCCAATGTTAAAGGTGGGGTGTTGACTCATCTCTCTCCTTTCAAGCCACTCAAAGAGAAGCCAAAGCCGGTCATTTTGGATTTCGAAAAGCCTCTTGTTGATCTGGAAAAGAAGATCAGCGATGTTCGGAAGATGGCAGAGGAAACTGGTTTGGATTTCAGTGATCAGATTCGCTCATTGGAGAATAAGTACCAAAAGGCTTTAAAGAATCTATATACACATCTAACTCCTATACAGAGGGTCAGCATTGCACGACATCCTAACAGGCCAACTTTCCTTGATCACATCTTTAACATAACTGATAAGTTTATGGAACTCCATGGTGATCGAGAAGGTTATGATGATCCTGCTATTGTTACTGGTTTAGGGAGTATAGATGGTAGGACCTACATGTTTATAGGCCACCAAAAGGGTAGAAATACTAAAGAAAGTATAAAGCGTAACTTTGGGATGCCAACTCCACATGGTTATAGGAAAGCTCTACGCATGATGGAATATGCAGATCATCATGGATTCCCAGTAGTTACTTTCATTGACACCCCTGGGGCATATGCTGACCTCAAATCTGAGGAACTTAACCAAGGTGAAGCAATTGCTCATAATTTGAGATCCATGTTTGGTCTGAAGGTGCCAGTTATTTCTATAGTTATTGGGGAAGGTGGATCTGGTGGTGCCCTTGCCATTGGATGCGCTAATAAATTACTCATGCTTGAAAATGCAGTGTTCTATGTTGCCAGTCCAGAGGCGTGTGCTGCAATCTTGTGGAAGAGTTCTAAAGCTGCTCCCAAGGCTGCTAAAAAACTGAAGATTACAGCGACTGAATTGTGCAAATTGAAAGTTGCAGATGGAGTTATACCTGAGCCCCTCGGTGGTGCACATGCTGATCCAAGTTGGACCTCTCAACAGATAAAAATTAAAATCAATGAAGCTATGGATGAACTCACTAAGATGAACACAGAAGACCTGTTAAAACATCGCATGCATAAGTTCCGAAAAATCGGTGGGTTCAAGGAAGGAGTTCCTGTAGATCCCAAGAAAAAAAGAAACATGAAGAAGAGGGATATACCTCCTGAGAAAGTTTCTGATTCTGAATTAGAAGTTCAGATTGAGAAGCTGAAGCAACAAATTTTGAAGTCCTCTTCTGAGCCTCCGAAACTCGATTTAGATGAGGCGATAAAGAAACTGGAAGAGAAACTGGAAAGGGAGGTTGATCAAGAATTGTCTGAGGCCGCTAAAGCATTGGGCTTAACAGAAAGTTTGTCGAAACTACGTGATGAATTTTCAAAAGCAAGTTCAGATGACCAACCTATTGATCCATTGCTGAATGGTAAGATAGAAAAACTAAAGGCAGATTTTAATCGAAGGTTGTCAGCAGCTCCTAATGCTAACAAGCTGAAGAAGAAGCATGGCATGTTGAGAGAATTGAATAAACTGAAGCTGCTTCTGTCAGACAGAAACAAGGAGGCCGCAACACTTACGCAACAACTGAAGAAGAAATTTGATGATGTCATGAATAATCCTAGAATAAAGGAAAACTATGAGGCGTTACAGTCTGAAATCCAGCGTGCTAGCGCATCCTCAGCAAGCGATTTGGATGATGAATTGAAGAAGAAAATCATTGCGTTCAATAAGGAGGTAGACTTGCAGGTGGTTAATGTTGTGAAGTCGGTTGGGTTAGATGTTCAGTTAGTAAAACCAGGACGAGATGGCAACGAGCTTTTGGTGCCTCAGATAGAAGAACTAAACAAGGATGTGAAAAAGGAAATTGAAGTTTTGGCAAACTCGTCAACAGATATTAAGAGAATGATGGAGCAATTGAAAGTGGAGGTCGCCAAAGCTGGAGGGACACCAAATTCGGAATCAAAGAATAGAATTGTTGCTTTGACGCAAAAAATAAAGCAGAGCCTTGCAGAGGCCGTAGGCTCTTCTAGCTTGAAAGAAAGATATGAAAACCTGATGTCTGAAACCTCTGGGGATGGAAGTTTGAAAGTAGGAAATGGTCTCACCGATGACGAGTTGAGAGAGAAAGTTGGTGCAAATCGCTCCTTTTCTTAA

Protein sequence

>Msa1063850

MASSSATLAGSAASDLLRSSTGGFTGVPLRTLGRTGLVLKRRDLTVSVTAKLRKVKKKEYPWSGNLDPNVKGGVLTHLSPFKPLKEKPKPVILDFEKPLVDLEKKISDVRKMAEETGLDFSDQIRSLENKYQKALKNLYTHLTPIQRVSIARHPNRPTFLDHIFNITDKFMELHGDREGYDDPAIVTGLGSIDGRTYMFIGHQKGRNTKESIKRNFGMPTPHGYRKALRMMEYADHHGFPVVTFIDTPGAYADLKSEELNQGEAIAHNLRSMFGLKVPVISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSSKAAPKAAKKLKITATELCKLKVADGVIPEPLGGAHADPSWTSQQIKIKINEAMDELTKMNTEDLLKHRMHKFRKIGGFKEGVPVDPKKKRNMKKRDIPPEKVSDSELEVQIEKLKQQILKSSSEPPKLDLDEAIKKLEEKLEREVDQELSEAAKALGLTESLSKLRDEFSKASSDDQPIDPLLNGKIEKLKADFNRRLSAAPNANKLKKKHGMLRELNKLKLLLSDRNKEAATLTQQLKKKFDDVMNNPRIKENYEALQSEIQRASASSASDLDDELKKKIIAFNKEVDLQVVNVVKSVGLDVQLVKPGRDGNELLVPQIEELNKDVKKEIEVLANSSTDIKRMMEQLKVEVAKAGGTPNSESKNRIVALTQKIKQSLAEAVGSSSLKERYENLMSETSGDGSLKVGNGLTDDELREKVGANRSFS*