Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1110890 | XP_003623702.1 | 82.051 | 234 | 40 | 1 | 226 | 457 | 322 | 555 | 2.51e-113 | 357 |
| Msa1110890 | XP_003623702.1 | 94.604 | 278 | 15 | 0 | 1 | 278 | 1 | 278 | 0.0 | 532 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1110890 | sp|Q9ZVI7|GAUT7_ARATH | 43.034 | 323 | 143 | 9 | 18 | 322 | 15 | 314 | 5.52e-61 | 212 |
| Msa1110890 | sp|Q9ZVI7|GAUT7_ARATH | 59.016 | 183 | 71 | 2 | 276 | 458 | 352 | 530 | 7.64e-57 | 201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1110890 | A2Q3W2 | 82.051 | 234 | 40 | 1 | 226 | 457 | 322 | 555 | 1.20e-113 | 357 |
| Msa1110890 | A2Q3W2 | 94.604 | 278 | 15 | 0 | 1 | 278 | 1 | 278 | 0.0 | 532 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0167090 | Msa1110890 | 0.805773 | 1.135462e-49 | -8.615850e-47 |
| Msa1027330 | Msa1110890 | 0.810705 | 1.009330e-50 | -8.615850e-47 |
| Msa1027390 | Msa1110890 | 0.814671 | 1.368473e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1110890 | MtrunA17_Chr7g0245621 | 94.604 | 278 | 15 | 0 | 1 | 278 | 1 | 278 | 0.0 | 532 |
| Msa1110890 | MtrunA17_Chr7g0245621 | 82.051 | 234 | 40 | 1 | 226 | 457 | 322 | 555 | 2.30e-117 | 357 |
| Msa1110890 | MtrunA17_Chr2g0290961 | 36.464 | 181 | 104 | 4 | 280 | 449 | 390 | 570 | 1.00e-32 | 131 |
| Msa1110890 | MtrunA17_Chr8g0383241 | 35.979 | 189 | 93 | 4 | 279 | 449 | 216 | 394 | 1.16e-32 | 129 |
| Msa1110890 | MtrunA17_Chr2g0277591 | 35.484 | 186 | 99 | 4 | 280 | 449 | 258 | 438 | 2.33e-29 | 120 |
| Msa1110890 | MtrunA17_Chr7g0246371 | 33.679 | 193 | 101 | 3 | 279 | 451 | 384 | 569 | 4.97e-29 | 120 |
| Msa1110890 | MtrunA17_Chr8g0351091 | 32.474 | 194 | 102 | 4 | 280 | 451 | 331 | 517 | 1.33e-27 | 115 |
| Msa1110890 | MtrunA17_Chr4g0061711 | 35.714 | 182 | 103 | 4 | 280 | 449 | 260 | 439 | 2.87e-27 | 114 |
| Msa1110890 | MtrunA17_Chr7g0235161 | 34.921 | 189 | 101 | 4 | 279 | 449 | 279 | 463 | 1.91e-26 | 112 |
| Msa1110890 | MtrunA17_Chr2g0283461 | 33.333 | 186 | 103 | 4 | 280 | 449 | 258 | 438 | 4.37e-26 | 110 |
| Msa1110890 | MtrunA17_Chr3g0138381 | 29.744 | 195 | 108 | 4 | 279 | 451 | 383 | 570 | 2.46e-25 | 109 |
| Msa1110890 | MtrunA17_Chr7g0218571 | 34.135 | 208 | 100 | 6 | 280 | 455 | 242 | 444 | 3.17e-25 | 108 |
| Msa1110890 | MtrunA17_Chr2g0319311 | 31.527 | 203 | 112 | 5 | 280 | 455 | 246 | 448 | 1.23e-24 | 106 |
| Msa1110890 | MtrunA17_Chr3g0097091 | 29.688 | 192 | 118 | 3 | 280 | 454 | 242 | 433 | 2.39e-24 | 105 |
| Msa1110890 | MtrunA17_Chr2g0308241 | 32.222 | 180 | 112 | 4 | 280 | 449 | 260 | 439 | 8.44e-24 | 104 |
| Msa1110890 | MtrunA17_Chr6g0456071 | 32.105 | 190 | 106 | 5 | 279 | 449 | 273 | 458 | 2.16e-22 | 100 |
| Msa1110890 | MtrunA17_Chr7g0260711 | 30.851 | 188 | 103 | 5 | 280 | 458 | 397 | 566 | 1.44e-21 | 97.8 |
| Msa1110890 | MtrunA17_Chr4g0076011 | 29.907 | 214 | 110 | 7 | 280 | 455 | 169 | 380 | 1.70e-21 | 97.1 |
| Msa1110890 | MtrunA17_Chr1g0184751 | 34.066 | 182 | 91 | 5 | 280 | 451 | 340 | 502 | 1.10e-18 | 89.0 |
| Msa1110890 | MtrunA17_Chr6g0454101 | 34.286 | 210 | 101 | 7 | 278 | 455 | 235 | 439 | 3.19e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1110890 | AT2G38650.3 | 43.034 | 323 | 143 | 9 | 18 | 322 | 15 | 314 | 7.03e-63 | 213 |
| Msa1110890 | AT2G38650.3 | 59.890 | 182 | 69 | 2 | 276 | 457 | 352 | 529 | 3.18e-59 | 203 |
| Msa1110890 | AT2G38650.2 | 43.034 | 323 | 143 | 9 | 18 | 322 | 15 | 314 | 5.61e-62 | 212 |
| Msa1110890 | AT2G38650.2 | 59.016 | 183 | 71 | 2 | 276 | 458 | 352 | 530 | 7.77e-58 | 201 |
| Msa1110890 | AT2G38650.1 | 43.034 | 323 | 143 | 9 | 18 | 322 | 15 | 314 | 5.61e-62 | 212 |
| Msa1110890 | AT2G38650.1 | 59.016 | 183 | 71 | 2 | 276 | 458 | 352 | 530 | 7.77e-58 | 201 |
| Msa1110890 | AT5G47780.1 | 38.587 | 184 | 102 | 5 | 279 | 451 | 338 | 521 | 6.51e-32 | 129 |
| Msa1110890 | AT1G06780.1 | 38.462 | 182 | 81 | 5 | 280 | 449 | 330 | 492 | 1.25e-28 | 119 |
| Msa1110890 | AT1G06780.2 | 38.462 | 182 | 81 | 5 | 280 | 449 | 343 | 505 | 1.75e-28 | 119 |
| Msa1110890 | AT4G38270.2 | 32.812 | 192 | 100 | 4 | 280 | 449 | 395 | 579 | 1.85e-28 | 119 |
| Msa1110890 | AT4G38270.1 | 32.812 | 192 | 100 | 4 | 280 | 449 | 399 | 583 | 1.98e-28 | 119 |
| Msa1110890 | AT3G61130.1 | 31.892 | 185 | 114 | 4 | 279 | 451 | 394 | 578 | 1.94e-27 | 116 |
| Msa1110890 | AT3G01040.2 | 36.058 | 208 | 96 | 6 | 280 | 455 | 237 | 439 | 2.40e-26 | 112 |
| Msa1110890 | AT3G01040.3 | 36.058 | 208 | 96 | 6 | 280 | 455 | 237 | 439 | 2.40e-26 | 112 |
| Msa1110890 | AT2G30575.1 | 35.556 | 180 | 89 | 5 | 280 | 449 | 351 | 513 | 8.84e-26 | 110 |
| Msa1110890 | AT3G25140.1 | 34.921 | 189 | 101 | 4 | 279 | 449 | 278 | 462 | 1.46e-25 | 110 |
| Msa1110890 | AT5G54690.1 | 32.512 | 203 | 110 | 5 | 280 | 455 | 239 | 441 | 2.09e-25 | 109 |
| Msa1110890 | AT5G15470.1 | 33.654 | 208 | 101 | 6 | 280 | 455 | 237 | 439 | 1.31e-24 | 107 |
| Msa1110890 | AT1G18580.1 | 31.319 | 182 | 113 | 4 | 280 | 449 | 260 | 441 | 1.17e-23 | 104 |
| Msa1110890 | AT2G46480.3 | 34.946 | 186 | 106 | 5 | 279 | 449 | 258 | 443 | 1.17e-21 | 98.2 |
| Msa1110890 | AT2G46480.4 | 34.946 | 186 | 106 | 5 | 279 | 449 | 271 | 456 | 1.28e-21 | 98.2 |
| Msa1110890 | AT3G01040.1 | 33.684 | 190 | 92 | 6 | 280 | 455 | 237 | 406 | 1.55e-21 | 97.4 |
| Msa1110890 | AT3G58790.2 | 29.000 | 200 | 117 | 3 | 280 | 454 | 114 | 313 | 3.55e-21 | 95.9 |
| Msa1110890 | AT3G58790.1 | 29.000 | 200 | 117 | 3 | 280 | 454 | 246 | 445 | 1.23e-20 | 95.1 |
| Msa1110890 | AT2G20810.1 | 36.413 | 184 | 102 | 4 | 280 | 449 | 259 | 441 | 1.02e-18 | 89.4 |
| Msa1110890 | AT3G02350.1 | 32.143 | 196 | 98 | 5 | 279 | 449 | 279 | 464 | 7.81e-17 | 83.6 |
| Msa1110890 | AT2G46480.1 | 31.667 | 180 | 95 | 5 | 279 | 449 | 271 | 431 | 5.96e-15 | 77.4 |
| Msa1110890 | AT2G46480.2 | 31.667 | 180 | 95 | 5 | 279 | 449 | 258 | 418 | 6.16e-15 | 77.4 |
Find 152 sgRNAs with CRISPR-Local
Find 415 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCAGACACATCCTCTTTA+TGG | 0.206165 | 7_3:+56319554 | None:intergenic |
| GATCTGCGTTATGATAATTT+TGG | 0.219694 | 7_3:-56315625 | Msa1110890:three_prime_UTR |
| TCATCAGCAGAACTTGTCTT+AGG | 0.221662 | 7_3:+56317585 | None:intergenic |
| AAGTGATTTAACCGATTTAA+AGG | 0.226377 | 7_3:-56315332 | Msa1110890:three_prime_UTR |
| GTCTTACTCAAACTTATAAA+AGG | 0.233256 | 7_3:-56315680 | Msa1110890:CDS |
| GGTCAATTGAAAGGTTATTT+AGG | 0.241667 | 7_3:-56315783 | Msa1110890:CDS |
| AAAATTGCCCCGGTCCAATA+TGG | 0.258905 | 7_3:-56315194 | Msa1110890:three_prime_UTR |
| TTCAATTTGCTGAATATATC+AGG | 0.273389 | 7_3:+56315921 | None:intergenic |
| TGTTTAGGATTATGAACTTT+AGG | 0.280446 | 7_3:+56317633 | None:intergenic |
| GTTCCTCTCGTCTTCCTTCT+CGG | 0.292503 | 7_3:-56320892 | Msa1110890:CDS |
| TGGTTCAAGAGGAACAATTA+TGG | 0.313905 | 7_3:-56316125 | Msa1110890:CDS |
| TCCAATATTATTTCCATTGT+TGG | 0.316834 | 7_3:-56321249 | None:intergenic |
| AAATGTATTCCGTTCTAAAC+TGG | 0.321203 | 7_3:+56315973 | None:intergenic |
| ACATCCAAGCACAGGAATTA+TGG | 0.323565 | 7_3:+56315745 | None:intergenic |
| ATTGAAGAAAGTTGTTGTTC+TGG | 0.326019 | 7_3:-56315904 | Msa1110890:CDS |
| TAATAATAATAATTAATAAC+TGG | 0.331335 | 7_3:+56321148 | None:intergenic |
| AATTCCTGTGCTTGGATGTC+GGG | 0.331896 | 7_3:-56315741 | Msa1110890:CDS |
| AACATCCATCCTCTCTGATT+TGG | 0.333242 | 7_3:+56316631 | None:intergenic |
| ACAAGTTCTGCTGATGAAAC+TGG | 0.340120 | 7_3:-56317579 | Msa1110890:CDS |
| GCTGAGTGAGGAAGTTAGTT+TGG | 0.340298 | 7_3:+56321217 | None:intergenic |
| CGAGACAGTTTGTCTTGTGC+TGG | 0.341179 | 7_3:+56317417 | None:intergenic |
| TGTTCAGTGCGACCATGTTT+AGG | 0.343385 | 7_3:+56317618 | None:intergenic |
| GACGATGAAGAGCGGTGGTT+TGG | 0.345441 | 7_3:-56321007 | Msa1110890:exon |
| AATTATCATAACGCAGATCT+AGG | 0.349343 | 7_3:+56315629 | None:intergenic |
| GGTTCAAGAGGAACAATTAT+GGG | 0.352318 | 7_3:-56316124 | Msa1110890:CDS |
| ATTTCAGGTAAGTCGGAATC+AGG | 0.354076 | 7_3:-56316195 | Msa1110890:intron |
| ATTATTATGCAATGAAGCTT+TGG | 0.355164 | 7_3:-56316145 | Msa1110890:CDS |
| TAGAAGTTGGAGGTGATTGC+AGG | 0.365442 | 7_3:+56318073 | None:intergenic |
| GGTGATTGCAGGGCAGCATT+AGG | 0.392037 | 7_3:+56318084 | None:intergenic |
| AGCGAGACTTGTCATCCCTT+TGG | 0.392190 | 7_3:-56315863 | Msa1110890:CDS |
| CTAGTGAGGTGGAGAGAGTT+TGG | 0.394979 | 7_3:-56315702 | Msa1110890:CDS |
| ACGATGAAGAGCGGTGGTTT+GGG | 0.396346 | 7_3:-56321006 | Msa1110890:CDS |
| TAGTAGTAGAGGAGTCAAAT+TGG | 0.398638 | 7_3:-56315544 | Msa1110890:three_prime_UTR |
| AGTGATTTAACCGATTTAAA+GGG | 0.401107 | 7_3:-56315331 | Msa1110890:three_prime_UTR |
| CTGAGTGAGGAAGTTAGTTT+GGG | 0.403684 | 7_3:+56321218 | None:intergenic |
| ACGGCAATTAACTACCATTC+GGG | 0.412981 | 7_3:-56315386 | Msa1110890:three_prime_UTR |
| AAAGGTTATTTAGGTGAGAA+AGG | 0.419292 | 7_3:-56315774 | Msa1110890:CDS |
| TAAATTTACTAGAATTATCA+AGG | 0.419670 | 7_3:-56315136 | Msa1110890:three_prime_UTR |
| CCATTCGGCACCCTTTAAAT+CGG | 0.420444 | 7_3:+56315321 | None:intergenic |
| GCATTAGGTGGCGGTGGCGG+CGG | 0.424131 | 7_3:+56318099 | None:intergenic |
| CGAACATCATGTCTATTGTA+TGG | 0.424864 | 7_3:+56319577 | None:intergenic |
| AACGGCAATTAACTACCATT+CGG | 0.426161 | 7_3:-56315387 | Msa1110890:three_prime_UTR |
| CCTCTCCACCGTCGTTTCGC+CGG | 0.428269 | 7_3:+56320958 | None:intergenic |
| GGTCTCATCATTGCAGTTCT+CGG | 0.431074 | 7_3:-56320937 | Msa1110890:CDS |
| GTTGAAAGACCAACTATTTG+TGG | 0.435282 | 7_3:-56317472 | Msa1110890:CDS |
| TCAGCCATAATTCCTGTGCT+TGG | 0.435804 | 7_3:-56315749 | Msa1110890:CDS |
| ATTGCTGTTCAGTAGGTGAC+TGG | 0.436938 | 7_3:-56315264 | Msa1110890:three_prime_UTR |
| ATTATTGGATATAGCAGTAC+TGG | 0.443491 | 7_3:-56315594 | Msa1110890:three_prime_UTR |
| AATGAAACACGAAACTCTTC+AGG | 0.443659 | 7_3:+56316023 | None:intergenic |
| CTCTGAAGACCAGGCTATGT+GGG | 0.450075 | 7_3:+56315165 | None:intergenic |
| AATGGTAGTTAATTGCCGTT+AGG | 0.452830 | 7_3:+56315390 | None:intergenic |
| CATCAGCAGAACTTGTCTTA+GGG | 0.459464 | 7_3:+56317586 | None:intergenic |
| TATATTCGTACATTAGAAGT+TGG | 0.462976 | 7_3:+56318060 | None:intergenic |
| AAATTGCCCCGGTCCAATAT+GGG | 0.466152 | 7_3:-56315193 | Msa1110890:three_prime_UTR |
| TTATAAAAGGTTGATAAAAG+AGG | 0.486751 | 7_3:-56315667 | Msa1110890:CDS |
| CTCTCCACCGTCGTTTCGCC+GGG | 0.488637 | 7_3:+56320959 | None:intergenic |
| CCCAACAAAATGAATGTACT+AGG | 0.488924 | 7_3:-56315493 | Msa1110890:three_prime_UTR |
| AACGGTAGTTAATTGCCATT+CGG | 0.490101 | 7_3:+56315306 | None:intergenic |
| GCAGCATTAGGTGGCGGTGG+CGG | 0.490926 | 7_3:+56318096 | None:intergenic |
| CAAACTCTCTCCACCTCACT+AGG | 0.492527 | 7_3:+56315703 | None:intergenic |
| TATAGCTGTGGTAGTAGTAG+AGG | 0.494972 | 7_3:-56315555 | Msa1110890:three_prime_UTR |
| TAATTCCTGTGCTTGGATGT+CGG | 0.497334 | 7_3:-56315742 | Msa1110890:CDS |
| ATGGTAGTTAATTGCCGTTA+GGG | 0.498823 | 7_3:+56315391 | None:intergenic |
| AAAACAGAGTATACAAGAGC+TGG | 0.502955 | 7_3:-56317388 | Msa1110890:CDS |
| GGGGCCATCCCATATTGGAC+CGG | 0.503675 | 7_3:+56315185 | None:intergenic |
| CTCCCATGTCTAGGTTCCAA+AGG | 0.505256 | 7_3:+56315847 | None:intergenic |
| TGGGATGGCCCCACATAGCC+TGG | 0.508262 | 7_3:-56315174 | Msa1110890:three_prime_UTR |
| CTGTGCAATTCTGCTCAGTA+AGG | 0.509200 | 7_3:-56315809 | Msa1110890:CDS |
| CAGAGAACCTTGGGAAGAGT+TGG | 0.510880 | 7_3:+56319130 | None:intergenic |
| AAGCTCTAGCCACAAATAGT+TGG | 0.514605 | 7_3:+56317463 | None:intergenic |
| GGGCCATCCCATATTGGACC+GGG | 0.515183 | 7_3:+56315186 | None:intergenic |
| AGTAGTAGAGGAGTCAAATT+GGG | 0.515203 | 7_3:-56315543 | Msa1110890:three_prime_UTR |
| CAGTTATGATAATCCATCCA+TGG | 0.516556 | 7_3:-56315997 | Msa1110890:CDS |
| AAACACCGTTCGCTGCAAAA+CGG | 0.517951 | 7_3:+56315288 | None:intergenic |
| GAAGAGCGGTGGTTTGGGCG+CGG | 0.519255 | 7_3:-56321001 | Msa1110890:CDS |
| GGCGCGGTTCAATCATCGTA+CGG | 0.521842 | 7_3:-56320985 | Msa1110890:CDS |
| GTTCTAAACTGGCCCATGGA+TGG | 0.523266 | 7_3:+56315984 | None:intergenic |
| GTTCTGAAGAATTATTCTAA+AGG | 0.524642 | 7_3:-56318268 | Msa1110890:CDS |
| TCCCATGTCTAGGTTCCAAA+GGG | 0.527041 | 7_3:+56315848 | None:intergenic |
| GAGCAATTGCTACGTGCCTA+AGG | 0.530701 | 7_3:+56315442 | None:intergenic |
| TCAATCATCGTACGGCGTCC+CGG | 0.531968 | 7_3:-56320977 | Msa1110890:CDS |
| TGCAGGGCAGCATTAGGTGG+CGG | 0.532715 | 7_3:+56318090 | None:intergenic |
| GTGTTTAATTGCTGTTCAGT+AGG | 0.536203 | 7_3:-56315271 | Msa1110890:three_prime_UTR |
| GAAGACGAGAGGAACGAGCA+TGG | 0.536352 | 7_3:+56320900 | None:intergenic |
| GTCTTTCAACTTCTTAACCA+TGG | 0.538036 | 7_3:+56317485 | None:intergenic |
| AGGGCAGCATTAGGTGGCGG+TGG | 0.539778 | 7_3:+56318093 | None:intergenic |
| CAATGAAGCTTTGGTTCAAG+AGG | 0.541078 | 7_3:-56316136 | Msa1110890:CDS |
| TCTCTGAAGACCAGGCTATG+TGG | 0.543325 | 7_3:+56315164 | None:intergenic |
| TGAGACCAAATCAGAGAGGA+TGG | 0.545417 | 7_3:-56316636 | Msa1110890:CDS |
| AAGTCGTGCGAGCTCACATA+CGG | 0.545885 | 7_3:-56317555 | Msa1110890:CDS |
| TTGGGCTGAGCTCAATGCAT+TGG | 0.548540 | 7_3:-56315525 | Msa1110890:three_prime_UTR |
| GTTTGAACCAACTCTTCCCA+AGG | 0.550559 | 7_3:-56319137 | Msa1110890:intron |
| ACATGATGTTCGCCATAAAG+AGG | 0.551438 | 7_3:-56319566 | Msa1110890:CDS |
| TATGTGGGGCCATCCCATAT+TGG | 0.553860 | 7_3:+56315180 | None:intergenic |
| GATTGCAGGGCAGCATTAGG+TGG | 0.556142 | 7_3:+56318087 | None:intergenic |
| CAATTCTGCTCAGTAAGGCT+AGG | 0.558632 | 7_3:-56315804 | Msa1110890:CDS |
| CAGCAGAACTTGTCTTAGGG+TGG | 0.560339 | 7_3:+56317589 | None:intergenic |
| TATTCTAAAGGAGACAAGAA+TGG | 0.560838 | 7_3:-56318256 | Msa1110890:CDS |
| ATTCGTACATTAGAAGTTGG+AGG | 0.563574 | 7_3:+56318063 | None:intergenic |
| TTAACTATTCTCTGAAGACC+AGG | 0.565003 | 7_3:+56315156 | None:intergenic |
| GAGACAGTTTGTCTTGTGCT+GGG | 0.565251 | 7_3:+56317418 | None:intergenic |
| ATTATCATAACGCAGATCTA+GGG | 0.565630 | 7_3:+56315630 | None:intergenic |
| TTCCGTTCTAAACTGGCCCA+TGG | 0.569222 | 7_3:+56315980 | None:intergenic |
| CAGAAGAGTGAAAACTGTTG+TGG | 0.571274 | 7_3:+56320866 | None:intergenic |
| GCTCAATATTTCAGGTAAGT+CGG | 0.574027 | 7_3:-56316202 | Msa1110890:intron |
| GGTGCCTGTGAGCAATTGCT+AGG | 0.575074 | 7_3:-56315242 | Msa1110890:three_prime_UTR |
| ACGGCGTCCCGGCGAAACGA+CGG | 0.577353 | 7_3:-56320966 | Msa1110890:CDS |
| TTGGGTTGATCTGCCAACAA+TGG | 0.581556 | 7_3:+56321236 | None:intergenic |
| CACACCTAGCAATTGCTCAC+AGG | 0.589409 | 7_3:+56315238 | None:intergenic |
| TTGCTGTTCAGTAGGTGACT+GGG | 0.593460 | 7_3:-56315263 | Msa1110890:three_prime_UTR |
| CCGATTTAAAGGGTGCCGAA+TGG | 0.594807 | 7_3:-56315321 | Msa1110890:three_prime_UTR |
| AGCAGAACTTGTCTTAGGGT+GGG | 0.594888 | 7_3:+56317590 | None:intergenic |
| ATCCCTTTGGAACCTAGACA+TGG | 0.597008 | 7_3:-56315850 | Msa1110890:CDS |
| ATCCATGGGCCAGTTTAGAA+CGG | 0.597269 | 7_3:-56315982 | Msa1110890:CDS |
| CCGGCGAAACGACGGTGGAG+AGG | 0.597288 | 7_3:-56320958 | Msa1110890:CDS |
| AGTTATGATAATCCATCCAT+GGG | 0.597691 | 7_3:-56315996 | Msa1110890:CDS |
| TGAACAGAGAAATACTCCTC+CGG | 0.598968 | 7_3:-56319736 | Msa1110890:intron |
| AGATAAATCAAGTCATGTGA+AGG | 0.603002 | 7_3:-56319173 | Msa1110890:CDS |
| ATTATATCAGCTTACAGTGG+TGG | 0.603346 | 7_3:+56317327 | None:intergenic |
| AATCAATCAACCGCTGAGTG+AGG | 0.604146 | 7_3:+56321205 | None:intergenic |
| CAACCCCGACATCCAAGCAC+AGG | 0.604325 | 7_3:+56315737 | None:intergenic |
| GTTCAAGAGGAACAATTATG+GGG | 0.611068 | 7_3:-56316123 | Msa1110890:CDS |
| AGAAGTTGGAGGTGATTGCA+GGG | 0.611391 | 7_3:+56318074 | None:intergenic |
| TGAACATAATTGACCTAGTG+AGG | 0.613070 | 7_3:-56315716 | Msa1110890:CDS |
| AGGTTGATAAAAGAGGTTAG+TGG | 0.618261 | 7_3:-56315660 | Msa1110890:CDS |
| AACACGAAACTCTTCAGGCA+AGG | 0.619209 | 7_3:+56316028 | None:intergenic |
| AGAAGTTATGAAAGACGCCA+TGG | 0.620598 | 7_3:-56317502 | Msa1110890:CDS |
| TGCCCCGGTCCAATATGGGA+TGG | 0.621817 | 7_3:-56315189 | Msa1110890:three_prime_UTR |
| GGTAGTTAATTGCCGTTAGG+GGG | 0.621837 | 7_3:+56315393 | None:intergenic |
| GTAAGGCTAGGTCAATTGAA+AGG | 0.623160 | 7_3:-56315792 | Msa1110890:CDS |
| CCATAAAGAGGATGTGTCTG+AGG | 0.623419 | 7_3:-56319554 | Msa1110890:intron |
| TGGTAGTTAATTGCCGTTAG+GGG | 0.624621 | 7_3:+56315392 | None:intergenic |
| AAATTTACTAGAATTATCAA+GGG | 0.625338 | 7_3:-56315135 | Msa1110890:three_prime_UTR |
| ATTCCTGTGCTTGGATGTCG+GGG | 0.629527 | 7_3:-56315740 | Msa1110890:CDS |
| AAATGTTGAGCATCTTGAGA+TGG | 0.630523 | 7_3:-56316081 | Msa1110890:CDS |
| AATATTGTTAAATATAGCTG+TGG | 0.631675 | 7_3:-56315567 | Msa1110890:three_prime_UTR |
| GCGTCCCGGCGAAACGACGG+TGG | 0.638563 | 7_3:-56320963 | Msa1110890:CDS |
| CAATTAACTACCATTCGGGG+AGG | 0.645683 | 7_3:-56315382 | Msa1110890:three_prime_UTR |
| AACTGTTGTGGAGACCGAGA+AGG | 0.646476 | 7_3:+56320878 | None:intergenic |
| AAAGTTCATAATCCTAAACA+TGG | 0.649384 | 7_3:-56317630 | Msa1110890:CDS |
| AGACCGAGAAGGAAGACGAG+AGG | 0.652406 | 7_3:+56320889 | None:intergenic |
| ACATAATTGACCTAGTGAGG+TGG | 0.653949 | 7_3:-56315713 | Msa1110890:CDS |
| TCTGAAGACCAGGCTATGTG+GGG | 0.664423 | 7_3:+56315166 | None:intergenic |
| CATACGGTAGTTACTGTCTG+TGG | 0.666063 | 7_3:-56317539 | Msa1110890:CDS |
| TCCCTTTGGAACCTAGACAT+GGG | 0.674373 | 7_3:-56315849 | Msa1110890:CDS |
| GGCCATCCCATATTGGACCG+GGG | 0.682435 | 7_3:+56315187 | None:intergenic |
| CGGCAATTAACTACCATTCG+GGG | 0.689276 | 7_3:-56315385 | Msa1110890:three_prime_UTR |
| AAAACGACGATGAAGAGCGG+TGG | 0.690888 | 7_3:-56321012 | Msa1110890:exon |
| AAGAAAACGACGATGAAGAG+CGG | 0.695564 | 7_3:-56321015 | Msa1110890:exon |
| CAGAGCTAAATCAGTCCCCG+TGG | 0.710189 | 7_3:-56316600 | Msa1110890:intron |
| AAACTAACTTCCTCACTCAG+CGG | 0.730121 | 7_3:-56321215 | Msa1110890:five_prime_UTR |
| GGGTTGAGACCAAATCAGAG+AGG | 0.752411 | 7_3:-56316640 | Msa1110890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTATTTATGTATTTTTTTT+TGG | - | chr7_3:56315947-56315966 | Msa1110890:CDS | 10.0% |
| !! | AAAAAATAAGACATTATTTA+CGG | + | chr7_3:56316981-56317000 | None:intergenic | 10.0% |
| !! | GAGAATATTTATATAAATAA+CGG | - | chr7_3:56317136-56317155 | Msa1110890:intron | 10.0% |
| !!! | AAAAATATCTTTGAAAAATT+TGG | - | chr7_3:56317324-56317343 | Msa1110890:intron | 10.0% |
| !!! | AAAATATCTTTGAAAAATTT+GGG | - | chr7_3:56317325-56317344 | Msa1110890:intron | 10.0% |
| !!! | AAAATTTAAAACAGAAAAAA+AGG | + | chr7_3:56318050-56318069 | None:intergenic | 10.0% |
| !!! | ATTTTTTTATTTTTTTTGGT+GGG | - | chr7_3:56318256-56318275 | Msa1110890:CDS | 10.0% |
| !!! | GTTTTTATTTTTTGTTTGAT+TGG | + | chr7_3:56315080-56315099 | None:intergenic | 15.0% |
| !! | AAAAAAAACTCAATTAACAT+TGG | + | chr7_3:56315464-56315483 | None:intergenic | 15.0% |
| !!! | TTCTCTTTTTAATTTAATTC+AGG | - | chr7_3:56315571-56315590 | Msa1110890:three_prime_UTR | 15.0% |
| !!! | GCAGATTTTTTTATTTTTTT+TGG | - | chr7_3:56318252-56318271 | Msa1110890:CDS | 15.0% |
| !!! | GATTTTTTTATTTTTTTTGG+TGG | - | chr7_3:56318255-56318274 | Msa1110890:CDS | 15.0% |
| !! | AAACTAATTAAACTACATTA+AGG | + | chr7_3:56319103-56319122 | None:intergenic | 15.0% |
| !!! | TATTTAACTTCTATTTACTT+GGG | - | chr7_3:56319179-56319198 | Msa1110890:intron | 15.0% |
| !!! | TATTATTTTAGAACCATTTA+TGG | - | chr7_3:56319204-56319223 | Msa1110890:intron | 15.0% |
| !!! | AGTTTACAAAAAATTTTACA+AGG | - | chr7_3:56319511-56319530 | Msa1110890:intron | 15.0% |
| !! | TATTAGAGAAAATAACATAA+TGG | + | chr7_3:56319839-56319858 | None:intergenic | 15.0% |
| !! | AAGTGAAATTATTAAAATAG+TGG | + | chr7_3:56319965-56319984 | None:intergenic | 15.0% |
| !!! | ATTTTGGAAAATACTATTAT+TGG | - | chr7_3:56320584-56320603 | Msa1110890:intron | 15.0% |
| !! | TAAATTTACTAGAATTATCA+AGG | - | chr7_3:56321057-56321076 | Msa1110890:five_prime_UTR | 15.0% |
| !! | AAATTTACTAGAATTATCAA+GGG | - | chr7_3:56321058-56321077 | Msa1110890:five_prime_UTR | 15.0% |
| !! | CGCTAAAATGAAAATTTATA+TGG | + | chr7_3:56315434-56315453 | None:intergenic | 20.0% |
| !!! | TCTGCTAACTTTATTTATTT+AGG | - | chr7_3:56316238-56316257 | Msa1110890:intron | 20.0% |
| !! | TATTCTTAAAGCATAGAAAA+TGG | - | chr7_3:56316852-56316871 | Msa1110890:intron | 20.0% |
| !! | ATTCTTAAAGCATAGAAAAT+GGG | - | chr7_3:56316853-56316872 | Msa1110890:intron | 20.0% |
| !!! | AAACAATTAATCCTTTTACT+AGG | - | chr7_3:56316877-56316896 | Msa1110890:intron | 20.0% |
| !!! | TTGTAAATTGCATAGTTTTT+TGG | - | chr7_3:56317288-56317307 | Msa1110890:intron | 20.0% |
| !!! | TTACTTTGAAATACTTTCTA+CGG | + | chr7_3:56317678-56317697 | None:intergenic | 20.0% |
| !!! | AATTTGTAAGATTTAAAACC+TGG | + | chr7_3:56317792-56317811 | None:intergenic | 20.0% |
| !! | ATCAATTATGTGTTCAATAA+AGG | + | chr7_3:56318166-56318185 | None:intergenic | 20.0% |
| !! | ATATATACCATTAATCTTAG+AGG | - | chr7_3:56318229-56318248 | Msa1110890:CDS | 20.0% |
| !! | TATATACCATTAATCTTAGA+GGG | - | chr7_3:56318230-56318249 | Msa1110890:CDS | 20.0% |
| !! | GAATAAGTACTAACATAAAA+AGG | - | chr7_3:56318340-56318359 | Msa1110890:intron | 20.0% |
| !! | GAAGCTAATAAAAATAATAC+AGG | + | chr7_3:56319149-56319168 | None:intergenic | 20.0% |
| !!! | GTATTTAACTTCTATTTACT+TGG | - | chr7_3:56319178-56319197 | Msa1110890:CDS | 20.0% |
| !! | GATGTAATAAAAACATTCAT+GGG | + | chr7_3:56319442-56319461 | None:intergenic | 20.0% |
| !! | AGATGTAATAAAAACATTCA+TGG | + | chr7_3:56319443-56319462 | None:intergenic | 20.0% |
| !! | GTATTCAAAATCACTTTATA+GGG | - | chr7_3:56319533-56319552 | Msa1110890:intron | 20.0% |
| !! | TCAGAACATTAAGTTTATAT+AGG | + | chr7_3:56319704-56319723 | None:intergenic | 20.0% |
| !!! | ATCTTCAAATTTTTCTGAAT+CGG | + | chr7_3:56319805-56319824 | None:intergenic | 20.0% |
| !!! | TTATAAAAGGTTGATAAAAG+AGG | - | chr7_3:56320526-56320545 | Msa1110890:intron | 20.0% |
| !! | AATATTGTTAAATATAGCTG+TGG | - | chr7_3:56320626-56320645 | Msa1110890:intron | 20.0% |
| !!! | GGTTAAATCACTTTTTAAAT+CGG | + | chr7_3:56320854-56320873 | None:intergenic | 20.0% |
| !!! | GTTTTCATTCGTAATTAAAA+AGG | - | chr7_3:56321105-56321124 | Msa1110890:five_prime_UTR | 20.0% |
| ! | ATGTGATGAAAATGAAGAAT+TGG | + | chr7_3:56315393-56315412 | None:intergenic | 25.0% |
| ! | TTTGTACGTTTGTTCAATTA+TGG | - | chr7_3:56315609-56315628 | Msa1110890:three_prime_UTR | 25.0% |
| !!! | TTTTTTTTGGTGTTAACCTT+TGG | - | chr7_3:56315960-56315979 | Msa1110890:CDS | 25.0% |
| !!! | TTTTTTTGGTGTTAACCTTT+GGG | - | chr7_3:56315961-56315980 | Msa1110890:CDS | 25.0% |
| !!! | AAAAGTACTATTTGTAACGA+TGG | - | chr7_3:56316261-56316280 | Msa1110890:intron | 25.0% |
| ! | TGCATAAACATAACAACAAA+TGG | + | chr7_3:56316426-56316445 | None:intergenic | 25.0% |
| !!! | ATTTGTTGTTATGTTTATGC+AGG | - | chr7_3:56316425-56316444 | Msa1110890:intron | 25.0% |
| !!! | ATAACATTTTGACTCTGATT+TGG | + | chr7_3:56316595-56316614 | None:intergenic | 25.0% |
| !! | AGGCTTATTTAAAATAGCTT+GGG | + | chr7_3:56316679-56316698 | None:intergenic | 25.0% |
| !! | AAGGCTTATTTAAAATAGCT+TGG | + | chr7_3:56316680-56316699 | None:intergenic | 25.0% |
| ! | TATACTGATAACCTAGTAAA+AGG | + | chr7_3:56316891-56316910 | None:intergenic | 25.0% |
| ! | TAAAGTTCAAACAAAACACA+TGG | - | chr7_3:56316909-56316928 | Msa1110890:intron | 25.0% |
| ! | GTGTATGAAACATTCAAAAA+CGG | - | chr7_3:56316935-56316954 | Msa1110890:intron | 25.0% |
| !! | TTTTTGTAAATTTCTTCCAC+AGG | - | chr7_3:56316996-56317015 | Msa1110890:intron | 25.0% |
| !! | TTTTGTAAATTTCTTCCACA+GGG | - | chr7_3:56316997-56317016 | Msa1110890:intron | 25.0% |
| !! | AACTTTGAGAATTGACATTT+GGG | + | chr7_3:56317456-56317475 | None:intergenic | 25.0% |
| !! | AAACTTTGAGAATTGACATT+TGG | + | chr7_3:56317457-56317476 | None:intergenic | 25.0% |
| !!! | AATATCTGTCTCTTTGTTTT+TGG | - | chr7_3:56317633-56317652 | Msa1110890:CDS | 25.0% |
| !!! | TACTTTGAAATACTTTCTAC+GGG | + | chr7_3:56317677-56317696 | None:intergenic | 25.0% |
| !! | TTGAGGATTTTCATCAATAA+TGG | + | chr7_3:56317708-56317727 | None:intergenic | 25.0% |
| !! | CCAATTTTTGCAATATAAAG+AGG | + | chr7_3:56317755-56317774 | None:intergenic | 25.0% |
| ! | CCTCTTTATATTGCAAAAAT+TGG | - | chr7_3:56317752-56317771 | Msa1110890:intron | 25.0% |
| !! | CAATAATAATTTTGCATGTC+AGG | - | chr7_3:56317900-56317919 | Msa1110890:intron | 25.0% |
| !!! | GTTCTGAAGAATTATTCTAA+AGG | - | chr7_3:56317925-56317944 | Msa1110890:intron | 25.0% |
| !!! | AAAGGAAATGATTTTCAAGA+AGG | + | chr7_3:56318032-56318051 | None:intergenic | 25.0% |
| !!! | TAATTAATTTTCAGGTGTCA+AGG | - | chr7_3:56318069-56318088 | Msa1110890:intron | 25.0% |
| ! | TATATTCGTACATTAGAAGT+TGG | + | chr7_3:56318136-56318155 | None:intergenic | 25.0% |
| ! | AATGTTATAGGAGATTATAC+TGG | + | chr7_3:56318313-56318332 | None:intergenic | 25.0% |
| !! | TGTTTAGGATTATGAACTTT+AGG | + | chr7_3:56318563-56318582 | None:intergenic | 25.0% |
| ! | AAAGTTCATAATCCTAAACA+TGG | - | chr7_3:56318563-56318582 | Msa1110890:intron | 25.0% |
| ! | AAAATTGAGATGAGAAAGAA+AGG | + | chr7_3:56319282-56319301 | None:intergenic | 25.0% |
| !! | ATCTCAATTTTGTTCTATCT+CGG | - | chr7_3:56319291-56319310 | Msa1110890:intron | 25.0% |
| ! | GGTATTCAAAATCACTTTAT+AGG | - | chr7_3:56319532-56319551 | Msa1110890:intron | 25.0% |
| ! | ATTATTATGCAATGAAGCTT+TGG | - | chr7_3:56320048-56320067 | Msa1110890:intron | 25.0% |
| !! | GTTGTAATGAATTGTCTTTT+AGG | + | chr7_3:56320142-56320161 | None:intergenic | 25.0% |
| !!! | TTCAATTTGCTGAATATATC+AGG | + | chr7_3:56320275-56320294 | None:intergenic | 25.0% |
| ! | GTCTTACTCAAACTTATAAA+AGG | - | chr7_3:56320513-56320532 | Msa1110890:intron | 25.0% |
| !! | AAAACTGAAATTTTCTCCTT+AGG | - | chr7_3:56320735-56320754 | Msa1110890:intron | 25.0% |
| !! | AAGTGATTTAACCGATTTAA+AGG | - | chr7_3:56320861-56320880 | Msa1110890:intron | 25.0% |
| !! | AGTGATTTAACCGATTTAAA+GGG | - | chr7_3:56320862-56320881 | Msa1110890:intron | 25.0% |
| !! | CATCACTTTGAAGATAAAAA+AGG | - | chr7_3:56321220-56321239 | Msa1110890:five_prime_UTR | 25.0% |
| TCGACAACAATAGTGATTTA+AGG | - | chr7_3:56315808-56315827 | Msa1110890:CDS | 30.0% | |
| TTGAATGTAATCACATGTGT+CGG | - | chr7_3:56315841-56315860 | Msa1110890:CDS | 30.0% | |
| AAAGAAATTCAACTCAGAGA+TGG | + | chr7_3:56316202-56316221 | None:intergenic | 30.0% | |
| CATTTGAATTGAATGCTTAC+CGG | + | chr7_3:56316479-56316498 | None:intergenic | 30.0% | |
| TAAGACATTATTTACGGCTT+TGG | + | chr7_3:56316975-56316994 | None:intergenic | 30.0% | |
| AGATAAATCAAGTCATGTGA+AGG | - | chr7_3:56317020-56317039 | Msa1110890:intron | 30.0% | |
| CTGTAATTGTCATCATTGTA+AGG | - | chr7_3:56317230-56317249 | Msa1110890:intron | 30.0% | |
| ! | TGTCATCATTGTAAGGTTTT+TGG | - | chr7_3:56317237-56317256 | Msa1110890:intron | 30.0% |
| ! | GTCATCATTGTAAGGTTTTT+GGG | - | chr7_3:56317238-56317257 | Msa1110890:intron | 30.0% |
| ACTATGCAATTTACAAAGCT+GGG | + | chr7_3:56317284-56317303 | None:intergenic | 30.0% | |
| AACTATGCAATTTACAAAGC+TGG | + | chr7_3:56317285-56317304 | None:intergenic | 30.0% | |
| TTGGGCAAAATAAAGATAAC+CGG | - | chr7_3:56317343-56317362 | Msa1110890:CDS | 30.0% | |
| ! | GTTTCTTTCTTTTTCTGTTC+TGG | + | chr7_3:56317383-56317402 | None:intergenic | 30.0% |
| AAAGAAACATAAGAGAACAG+TGG | - | chr7_3:56317395-56317414 | Msa1110890:CDS | 30.0% | |
| ! | TTCTCAAAGTTTGTTCGAAA+TGG | - | chr7_3:56317465-56317484 | Msa1110890:CDS | 30.0% |
| ! | TATTCTAAAGGAGACAAGAA+TGG | - | chr7_3:56317937-56317956 | Msa1110890:intron | 30.0% |
| ACCAATGAAGAAAAACATAG+AGG | - | chr7_3:56317970-56317989 | Msa1110890:intron | 30.0% | |
| ! | ACCTCTATGTTTTTCTTCAT+TGG | + | chr7_3:56317974-56317993 | None:intergenic | 30.0% |
| !!! | TGATTTTCAAGAAGGTATCA+GGG | + | chr7_3:56318024-56318043 | None:intergenic | 30.0% |
| !!! | ATGATTTTCAAGAAGGTATC+AGG | + | chr7_3:56318025-56318044 | None:intergenic | 30.0% |
| TGGTGGGATAATAATTTAGT+AGG | - | chr7_3:56318272-56318291 | Msa1110890:CDS | 30.0% | |
| TATTCTGCTGTGAATGTTAT+AGG | + | chr7_3:56318325-56318344 | None:intergenic | 30.0% | |
| GCTCCATTCAAATAGTTAAT+CGG | - | chr7_3:56318373-56318392 | Msa1110890:intron | 30.0% | |
| CTCCATTCAAATAGTTAATC+GGG | - | chr7_3:56318374-56318393 | Msa1110890:intron | 30.0% | |
| !! | AAATAACCTTTAAAGTCTGC+TGG | + | chr7_3:56318486-56318505 | None:intergenic | 30.0% |
| !!! | CTTGTATACTCTGTTTTAGT+TGG | + | chr7_3:56318802-56318821 | None:intergenic | 30.0% |
| CAAATTATATCAGCTTACAG+TGG | + | chr7_3:56318872-56318891 | None:intergenic | 30.0% | |
| CTTTCTACTTGAGAAGTTAT+TGG | - | chr7_3:56318928-56318947 | Msa1110890:intron | 30.0% | |
| ATTGTCTATGGAACCATAAA+TGG | + | chr7_3:56319220-56319239 | None:intergenic | 30.0% | |
| !!! | TGGTTCCATAGACAATTTTT+TGG | - | chr7_3:56319224-56319243 | Msa1110890:intron | 30.0% |
| !!! | GGTTCCATAGACAATTTTTT+GGG | - | chr7_3:56319225-56319244 | Msa1110890:intron | 30.0% |
| TTAGCCCAAAAAATTGTCTA+TGG | + | chr7_3:56319232-56319251 | None:intergenic | 30.0% | |
| !!! | AGACAATTTTTTGGGCTAAT+AGG | - | chr7_3:56319233-56319252 | Msa1110890:intron | 30.0% |
| ! | TCTCAATTTTGTTCTATCTC+GGG | - | chr7_3:56319292-56319311 | Msa1110890:intron | 30.0% |
| ! | TTTGAGGTTAATCAACAGAA+AGG | + | chr7_3:56319329-56319348 | None:intergenic | 30.0% |
| ACAATTATATGATCTGACTG+AGG | - | chr7_3:56319644-56319663 | Msa1110890:intron | 30.0% | |
| ATCATCACATTATGAAGAAG+AGG | - | chr7_3:56319779-56319798 | Msa1110890:intron | 30.0% | |
| AGTTATGATAATCCATCCAT+GGG | - | chr7_3:56320197-56320216 | Msa1110890:intron | 30.0% | |
| ! | AAATGTATTCCGTTCTAAAC+TGG | + | chr7_3:56320223-56320242 | None:intergenic | 30.0% |
| ! | ATTGAAGAAAGTTGTTGTTC+TGG | - | chr7_3:56320289-56320308 | Msa1110890:intron | 30.0% |
| GGTCAATTGAAAGGTTATTT+AGG | - | chr7_3:56320410-56320429 | Msa1110890:intron | 30.0% | |
| AAAGGTTATTTAGGTGAGAA+AGG | - | chr7_3:56320419-56320438 | Msa1110890:intron | 30.0% | |
| ATTATCATAACGCAGATCTA+GGG | + | chr7_3:56320566-56320585 | None:intergenic | 30.0% | |
| AATTATCATAACGCAGATCT+AGG | + | chr7_3:56320567-56320586 | None:intergenic | 30.0% | |
| ! | GATCTGCGTTATGATAATTT+TGG | - | chr7_3:56320568-56320587 | Msa1110890:intron | 30.0% |
| ATTATTGGATATAGCAGTAC+TGG | - | chr7_3:56320599-56320618 | Msa1110890:intron | 30.0% | |
| ! | CCTAGTACATTCATTTTGTT+GGG | + | chr7_3:56320703-56320722 | None:intergenic | 30.0% |
| !! | TTTTAAGAGGATTGCTCTTT+AGG | + | chr7_3:56320981-56321000 | None:intergenic | 30.0% |
| ! | GTTTTCATGTCATGTATGTA+TGG | - | chr7_3:56321154-56321173 | Msa1110890:five_prime_UTR | 30.0% |
| ! | CACTTTGAAGATAAAAAAGG+TGG | - | chr7_3:56321223-56321242 | Msa1110890:five_prime_UTR | 30.0% |
| ATTGACACGTATACTTACAC+CGG | - | chr7_3:56315769-56315788 | Msa1110890:CDS | 35.0% | |
| ATTCATAGGTGGAACATTCT+TGG | + | chr7_3:56316043-56316062 | None:intergenic | 35.0% | |
| AGAACTTGAGTTCGATTCAT+AGG | + | chr7_3:56316057-56316076 | None:intergenic | 35.0% | |
| TCTCCTGAACAAATGTTCTT+TGG | - | chr7_3:56316074-56316093 | Msa1110890:CDS | 35.0% | |
| ! | AATTTTGCACGAAACTTGCA+TGG | - | chr7_3:56316284-56316303 | Msa1110890:intron | 35.0% |
| AATGACACAAGAGAAAGTGA+GGG | + | chr7_3:56316570-56316589 | None:intergenic | 35.0% | |
| AAATGACACAAGAGAAAGTG+AGG | + | chr7_3:56316571-56316590 | None:intergenic | 35.0% | |
| CGAACATCATGTCTATTGTA+TGG | + | chr7_3:56316619-56316638 | None:intergenic | 35.0% | |
| AGAATGCTAGAAGAAAAGGA+AGG | + | chr7_3:56316699-56316718 | None:intergenic | 35.0% | |
| CAGAAGAATGCTAGAAGAAA+AGG | + | chr7_3:56316703-56316722 | None:intergenic | 35.0% | |
| TTTCTTCTAGCATTCTTCTG+CGG | - | chr7_3:56316703-56316722 | Msa1110890:intron | 35.0% | |
| TGACTACAACTAAAACAGTG+AGG | + | chr7_3:56316747-56316766 | None:intergenic | 35.0% | |
| TTAGCATGCACAAACATTGA+TGG | - | chr7_3:56316828-56316847 | Msa1110890:intron | 35.0% | |
| TAGCATGCACAAACATTGAT+GGG | - | chr7_3:56316829-56316848 | Msa1110890:intron | 35.0% | |
| GTTCAAACAAAACACATGGT+TGG | - | chr7_3:56316913-56316932 | Msa1110890:intron | 35.0% | |
| ! | ATTATTTACGGCTTTGGTAG+GGG | + | chr7_3:56316969-56316988 | None:intergenic | 35.0% |
| ! | CATTATTTACGGCTTTGGTA+GGG | + | chr7_3:56316970-56316989 | None:intergenic | 35.0% |
| ! | ACATTATTTACGGCTTTGGT+AGG | + | chr7_3:56316971-56316990 | None:intergenic | 35.0% |
| AGTATTATGCAGAGAACCTT+GGG | + | chr7_3:56317075-56317094 | None:intergenic | 35.0% | |
| TTCTTGCCTAACATAATCGA+AGG | - | chr7_3:56317183-56317202 | Msa1110890:intron | 35.0% | |
| TCTTGCCTAACATAATCGAA+GGG | - | chr7_3:56317184-56317203 | Msa1110890:intron | 35.0% | |
| ! | GTTTTCCCTTCGATTATGTT+AGG | + | chr7_3:56317192-56317211 | None:intergenic | 35.0% |
| TTTACAAAGCTGGGATCTTA+AGG | + | chr7_3:56317275-56317294 | None:intergenic | 35.0% | |
| ! | TCTTTCTTTTTCTGTTCTGG+AGG | + | chr7_3:56317380-56317399 | None:intergenic | 35.0% |
| TTGAGAATTGACATTTGGGA+AGG | + | chr7_3:56317452-56317471 | None:intergenic | 35.0% | |
| ! | AGCGTTTGGTTAGTTAAGAT+AGG | + | chr7_3:56317574-56317593 | None:intergenic | 35.0% |
| TGAAATACTTTCTACGGGTT+AGG | + | chr7_3:56317672-56317691 | None:intergenic | 35.0% | |
| GACGTGGAACAATTTATTTG+AGG | + | chr7_3:56317725-56317744 | None:intergenic | 35.0% | |
| TAAATTGTTCCACGTCAAAG+TGG | - | chr7_3:56317729-56317748 | Msa1110890:intron | 35.0% | |
| !! | CAACTTGTTAATCTGGAACA+AGG | + | chr7_3:56317815-56317834 | None:intergenic | 35.0% |
| TGTTCCAGATTAACAAGTTG+TGG | - | chr7_3:56317815-56317834 | Msa1110890:intron | 35.0% | |
| GTTCCAGATTAACAAGTTGT+GGG | - | chr7_3:56317816-56317835 | Msa1110890:intron | 35.0% | |
| !! | AATCCCACAACTTGTTAATC+TGG | + | chr7_3:56317822-56317841 | None:intergenic | 35.0% |
| AGATTAACAAGTTGTGGGAT+TGG | - | chr7_3:56317821-56317840 | Msa1110890:intron | 35.0% | |
| GATTAACAAGTTGTGGGATT+GGG | - | chr7_3:56317822-56317841 | Msa1110890:intron | 35.0% | |
| ATTAACAAGTTGTGGGATTG+GGG | - | chr7_3:56317823-56317842 | Msa1110890:intron | 35.0% | |
| GGTGTAAATGCATCTTCTAT+GGG | - | chr7_3:56317844-56317863 | Msa1110890:intron | 35.0% | |
| ATTCGTACATTAGAAGTTGG+AGG | + | chr7_3:56318133-56318152 | None:intergenic | 35.0% | |
| !! | AATCTGCCCTCTAAGATTAA+TGG | + | chr7_3:56318239-56318258 | None:intergenic | 35.0% |
| GACCCGATTAACTATTTGAA+TGG | + | chr7_3:56318379-56318398 | None:intergenic | 35.0% | |
| TACTATCCAGCAGACTTTAA+AGG | - | chr7_3:56318477-56318496 | Msa1110890:intron | 35.0% | |
| GTCTTTCAACTTCTTAACCA+TGG | + | chr7_3:56318711-56318730 | None:intergenic | 35.0% | |
| GTTGAAAGACCAACTATTTG+TGG | - | chr7_3:56318721-56318740 | Msa1110890:intron | 35.0% | |
| AAAACAGAGTATACAAGAGC+TGG | - | chr7_3:56318805-56318824 | Msa1110890:intron | 35.0% | |
| ATTATATCAGCTTACAGTGG+TGG | + | chr7_3:56318869-56318888 | None:intergenic | 35.0% | |
| !! | TTCTTATTAGCTTGCAGATC+TGG | - | chr7_3:56319025-56319044 | Msa1110890:intron | 35.0% |
| !! | CAGGTCACTTTAGTTGTTTT+AGG | + | chr7_3:56319130-56319149 | None:intergenic | 35.0% |
| ATAGGTTATACTGCAAAGCA+TGG | - | chr7_3:56319251-56319270 | Msa1110890:intron | 35.0% | |
| ! | CTCAATTTTGTTCTATCTCG+GGG | - | chr7_3:56319293-56319312 | Msa1110890:intron | 35.0% |
| !! | AATCCTGAGCTTTTGATAGT+TGG | + | chr7_3:56319406-56319425 | None:intergenic | 35.0% |
| !!! | ATGAGAAAAGTGCTTTTGCA+CGG | + | chr7_3:56319479-56319498 | None:intergenic | 35.0% |
| TTCAACCTCTATGAATTCAC+TGG | + | chr7_3:56319936-56319955 | None:intergenic | 35.0% | |
| TTGTTGCTGCTCAATATTTC+AGG | - | chr7_3:56319983-56320002 | Msa1110890:intron | 35.0% | |
| ! | GCTCAATATTTCAGGTAAGT+CGG | - | chr7_3:56319991-56320010 | Msa1110890:intron | 35.0% |
| ! | GTTTTTCATGTGTTGTCTGA+TGG | - | chr7_3:56320020-56320039 | Msa1110890:intron | 35.0% |
| TGGTTCAAGAGGAACAATTA+TGG | - | chr7_3:56320068-56320087 | Msa1110890:intron | 35.0% | |
| GGTTCAAGAGGAACAATTAT+GGG | - | chr7_3:56320069-56320088 | Msa1110890:intron | 35.0% | |
| GTTCAAGAGGAACAATTATG+GGG | - | chr7_3:56320070-56320089 | Msa1110890:intron | 35.0% | |
| AAATGTTGAGCATCTTGAGA+TGG | - | chr7_3:56320112-56320131 | Msa1110890:intron | 35.0% | |
| AATGAAACACGAAACTCTTC+AGG | + | chr7_3:56320173-56320192 | None:intergenic | 35.0% | |
| CAGTTATGATAATCCATCCA+TGG | - | chr7_3:56320196-56320215 | Msa1110890:intron | 35.0% | |
| TGAACATAATTGACCTAGTG+AGG | - | chr7_3:56320477-56320496 | Msa1110890:intron | 35.0% | |
| !! | AGGTTGATAAAAGAGGTTAG+TGG | - | chr7_3:56320533-56320552 | Msa1110890:intron | 35.0% |
| TAGTAGTAGAGGAGTCAAAT+TGG | - | chr7_3:56320649-56320668 | Msa1110890:intron | 35.0% | |
| AGTAGTAGAGGAGTCAAATT+GGG | - | chr7_3:56320650-56320669 | Msa1110890:intron | 35.0% | |
| CCCAACAAAATGAATGTACT+AGG | - | chr7_3:56320700-56320719 | Msa1110890:intron | 35.0% | |
| ! | GCCTAGTACATTCATTTTGT+TGG | + | chr7_3:56320704-56320723 | None:intergenic | 35.0% |
| !! | TTTTGGGTAATTTGAGGTTC+TGG | + | chr7_3:56320778-56320797 | None:intergenic | 35.0% |
| ATGGTAGTTAATTGCCGTTA+GGG | + | chr7_3:56320805-56320824 | None:intergenic | 35.0% | |
| AATGGTAGTTAATTGCCGTT+AGG | + | chr7_3:56320806-56320825 | None:intergenic | 35.0% | |
| AACGGCAATTAACTACCATT+CGG | - | chr7_3:56320806-56320825 | Msa1110890:intron | 35.0% | |
| !! | ATTCGGGGAGGTTTTTAATT+CGG | - | chr7_3:56320823-56320842 | Msa1110890:intron | 35.0% |
| AACGGTAGTTAATTGCCATT+CGG | + | chr7_3:56320890-56320909 | None:intergenic | 35.0% | |
| ! | GTGTTTAATTGCTGTTCAGT+AGG | - | chr7_3:56320922-56320941 | Msa1110890:CDS | 35.0% |
| ATCCTCTTAAAAAATTGCCC+CGG | - | chr7_3:56320989-56321008 | Msa1110890:CDS | 35.0% | |
| ! | TTAACTATTCTCTGAAGACC+AGG | + | chr7_3:56321040-56321059 | None:intergenic | 35.0% |
| ! | CTGAGTGAGGAAGTTAGTTT+GGG | + | chr7_3:56314978-56314997 | None:intergenic | 40.0% |
| AAACTAACTTCCTCACTCAG+CGG | - | chr7_3:56314978-56314997 | Msa1110890:three_prime_UTR | 40.0% | |
| AAGAAAACGACGATGAAGAG+CGG | - | chr7_3:56315178-56315197 | Msa1110890:three_prime_UTR | 40.0% | |
| CAGAAGAGTGAAAACTGTTG+TGG | + | chr7_3:56315330-56315349 | None:intergenic | 40.0% | |
| ! | CACAACAGTTTTCACTCTTC+TGG | - | chr7_3:56315328-56315347 | Msa1110890:three_prime_UTR | 40.0% |
| TACTTACATCTTGGCCAAAC+TGG | + | chr7_3:56316013-56316032 | None:intergenic | 40.0% | |
| GGTCAGACTTACTTACATCT+TGG | + | chr7_3:56316022-56316041 | None:intergenic | 40.0% | |
| ACTTGAGTTCGATTCATAGG+TGG | + | chr7_3:56316054-56316073 | None:intergenic | 40.0% | |
| CCACCAAAGAACATTTGTTC+AGG | + | chr7_3:56316080-56316099 | None:intergenic | 40.0% | |
| CCTGAACAAATGTTCTTTGG+TGG | - | chr7_3:56316077-56316096 | Msa1110890:CDS | 40.0% | |
| CACGAAACTTGCATGGATTT+AGG | - | chr7_3:56316291-56316310 | Msa1110890:intron | 40.0% | |
| ! | GCATGGATTTAGGCATTGTT+TGG | - | chr7_3:56316301-56316320 | Msa1110890:intron | 40.0% |
| TGAACAGAGAAATACTCCTC+CGG | - | chr7_3:56316457-56316476 | Msa1110890:intron | 40.0% | |
| TTGAATTGAATGCTTACCGG+AGG | + | chr7_3:56316476-56316495 | None:intergenic | 40.0% | |
| ACATGATGTTCGCCATAAAG+AGG | - | chr7_3:56316627-56316646 | Msa1110890:CDS | 40.0% | |
| TTCTTCTAGCATTCTTCTGC+GGG | - | chr7_3:56316704-56316723 | Msa1110890:intron | 40.0% | |
| TGACTTGATTTATCTCCCTG+TGG | + | chr7_3:56317015-56317034 | None:intergenic | 40.0% | |
| GAGTATTATGCAGAGAACCT+TGG | + | chr7_3:56317076-56317095 | None:intergenic | 40.0% | |
| AGGTTCTCTGCATAATACTC+TGG | - | chr7_3:56317076-56317095 | Msa1110890:intron | 40.0% | |
| TTCTCTGCATAATACTCTGG+TGG | - | chr7_3:56317079-56317098 | Msa1110890:intron | 40.0% | |
| TACCTCTCAAGTCTCAACTA+GGG | + | chr7_3:56317541-56317560 | None:intergenic | 40.0% | |
| ATACCTCTCAAGTCTCAACT+AGG | + | chr7_3:56317542-56317561 | None:intergenic | 40.0% | |
| !! | TTGAGACTTGAGAGGTATCA+AGG | - | chr7_3:56317544-56317563 | Msa1110890:CDS | 40.0% |
| CATAAACTGCACATTGCCAA+TGG | - | chr7_3:56317605-56317624 | Msa1110890:CDS | 40.0% | |
| ! | AGACAGATATTTTGCGCCAT+TGG | + | chr7_3:56317624-56317643 | None:intergenic | 40.0% |
| !! | TTTCTACGGGTTAGGAACAA+AGG | + | chr7_3:56317664-56317683 | None:intergenic | 40.0% |
| GGGTGTAAATGCATCTTCTA+TGG | - | chr7_3:56317843-56317862 | Msa1110890:intron | 40.0% | |
| ! | ATCTTCTATGGGTTGTGTTG+TGG | - | chr7_3:56317855-56317874 | Msa1110890:intron | 40.0% |
| CAGGGCATACGATATTGAAT+CGG | + | chr7_3:56318006-56318025 | None:intergenic | 40.0% | |
| CAAATAGTTAATCGGGTCGT+AGG | - | chr7_3:56318381-56318400 | Msa1110890:intron | 40.0% | |
| GAGAGACTGTGAGTTTGATT+TGG | + | chr7_3:56318428-56318447 | None:intergenic | 40.0% | |
| CATCAGCAGAACTTGTCTTA+GGG | + | chr7_3:56318610-56318629 | None:intergenic | 40.0% | |
| TCATCAGCAGAACTTGTCTT+AGG | + | chr7_3:56318611-56318630 | None:intergenic | 40.0% | |
| ACAAGTTCTGCTGATGAAAC+TGG | - | chr7_3:56318614-56318633 | Msa1110890:intron | 40.0% | |
| AGAAGTTATGAAAGACGCCA+TGG | - | chr7_3:56318691-56318710 | Msa1110890:intron | 40.0% | |
| ! | AAGCTCTAGCCACAAATAGT+TGG | + | chr7_3:56318733-56318752 | None:intergenic | 40.0% |
| AACTGAAACATCTAAGCTGG+GGG | + | chr7_3:56318907-56318926 | None:intergenic | 40.0% | |
| CAACTGAAACATCTAAGCTG+GGG | + | chr7_3:56318908-56318927 | None:intergenic | 40.0% | |
| GCAACTGAAACATCTAAGCT+GGG | + | chr7_3:56318909-56318928 | None:intergenic | 40.0% | |
| AGCAACTGAAACATCTAAGC+TGG | + | chr7_3:56318910-56318929 | None:intergenic | 40.0% | |
| AGTCAAGGTTCACAGAACAA+CGG | + | chr7_3:56319359-56319378 | None:intergenic | 40.0% | |
| TTCTGTGAACCTTGACTTTC+AGG | - | chr7_3:56319362-56319381 | Msa1110890:intron | 40.0% | |
| GAACCAACTATCAAAAGCTC+AGG | - | chr7_3:56319400-56319419 | Msa1110890:intron | 40.0% | |
| !!! | TGAGAAAAGTGCTTTTGCAC+GGG | + | chr7_3:56319478-56319497 | None:intergenic | 40.0% |
| AACATCCATCCTCTCTGATT+TGG | + | chr7_3:56319565-56319584 | None:intergenic | 40.0% | |
| ATCAACATTGTCGCAAACCA+CGG | + | chr7_3:56319613-56319632 | None:intergenic | 40.0% | |
| ATGCACCAGTGAATTCATAG+AGG | - | chr7_3:56319928-56319947 | Msa1110890:intron | 40.0% | |
| ! | ATTTCAGGTAAGTCGGAATC+AGG | - | chr7_3:56319998-56320017 | Msa1110890:intron | 40.0% |
| ! | CAATGAAGCTTTGGTTCAAG+AGG | - | chr7_3:56320057-56320076 | Msa1110890:intron | 40.0% |
| !! | TGACTTTTTCTCCCATGTCT+AGG | + | chr7_3:56320358-56320377 | None:intergenic | 40.0% |
| GACATGGGAGAAAAAGTCAA+TGG | - | chr7_3:56320359-56320378 | Msa1110890:intron | 40.0% | |
| GTAAGGCTAGGTCAATTGAA+AGG | - | chr7_3:56320401-56320420 | Msa1110890:intron | 40.0% | |
| ACATCCAAGCACAGGAATTA+TGG | + | chr7_3:56320451-56320470 | None:intergenic | 40.0% | |
| TAATTCCTGTGCTTGGATGT+CGG | - | chr7_3:56320451-56320470 | Msa1110890:intron | 40.0% | |
| ACATAATTGACCTAGTGAGG+TGG | - | chr7_3:56320480-56320499 | Msa1110890:intron | 40.0% | |
| TATAGCTGTGGTAGTAGTAG+AGG | - | chr7_3:56320638-56320657 | Msa1110890:intron | 40.0% | |
| !! | GGGGTATTTTGGGTAATTTG+AGG | + | chr7_3:56320784-56320803 | None:intergenic | 40.0% |
| TTACCCAAAATACCCCCTAA+CGG | - | chr7_3:56320788-56320807 | Msa1110890:intron | 40.0% | |
| TGGTAGTTAATTGCCGTTAG+GGG | + | chr7_3:56320804-56320823 | None:intergenic | 40.0% | |
| ACGGCAATTAACTACCATTC+GGG | - | chr7_3:56320807-56320826 | Msa1110890:intron | 40.0% | |
| GAATTAAAAACCTCCCCGAA+TGG | + | chr7_3:56320824-56320843 | None:intergenic | 40.0% | |
| GCTGAGTGAGGAAGTTAGTT+TGG | + | chr7_3:56314979-56314998 | None:intergenic | 45.0% | |
| AATCAATCAACCGCTGAGTG+AGG | + | chr7_3:56314991-56315010 | None:intergenic | 45.0% | |
| GGTCTCATCATTGCAGTTCT+CGG | - | chr7_3:56315256-56315275 | Msa1110890:three_prime_UTR | 45.0% | |
| CGACGTGTTAATGTCATGTC+CGG | + | chr7_3:56315791-56315810 | None:intergenic | 45.0% | |
| ! | GTAATCACATGTGTCGGTGT+CGG | - | chr7_3:56315847-56315866 | Msa1110890:CDS | 45.0% |
| ! | GGTGTTAACCTTTGGGTTTC+CGG | - | chr7_3:56315968-56315987 | Msa1110890:CDS | 45.0% |
| ! | GTGTTAACCTTTGGGTTTCC+GGG | - | chr7_3:56315969-56315988 | Msa1110890:CDS | 45.0% |
| ! | TGTTAACCTTTGGGTTTCCG+GGG | - | chr7_3:56315970-56315989 | Msa1110890:CDS | 45.0% |
| TTGGCCAAACTGGATTACCA+GGG | + | chr7_3:56316003-56316022 | None:intergenic | 45.0% | |
| GTGGAGCTCATAATCCACTT+GGG | - | chr7_3:56316096-56316115 | Msa1110890:CDS | 45.0% | |
| CCTCAGACACATCCTCTTTA+TGG | + | chr7_3:56316642-56316661 | None:intergenic | 45.0% | |
| CCATAAAGAGGATGTGTCTG+AGG | - | chr7_3:56316639-56316658 | Msa1110890:CDS | 45.0% | |
| ! | AAGAGGATGTGTCTGAGGTA+CGG | - | chr7_3:56316644-56316663 | Msa1110890:intron | 45.0% |
| GTTTGAACCAACTCTTCCCA+AGG | - | chr7_3:56317056-56317075 | Msa1110890:intron | 45.0% | |
| TCAAGTCTCAACTAGGGGAT+GGG | + | chr7_3:56317535-56317554 | None:intergenic | 45.0% | |
| ACCTCTCAAGTCTCAACTAG+GGG | + | chr7_3:56317540-56317559 | None:intergenic | 45.0% | |
| TAACTAACCAAACGCTCCCA+AGG | - | chr7_3:56317578-56317597 | Msa1110890:CDS | 45.0% | |
| GTGCAGTTTATGCAGTCCTT+GGG | + | chr7_3:56317597-56317616 | None:intergenic | 45.0% | |
| TGTGCAGTTTATGCAGTCCT+TGG | + | chr7_3:56317598-56317617 | None:intergenic | 45.0% | |
| ! | ATAAAGAGGCCACTTTGACG+TGG | + | chr7_3:56317741-56317760 | None:intergenic | 45.0% |
| AGAAGTTGGAGGTGATTGCA+GGG | + | chr7_3:56318122-56318141 | None:intergenic | 45.0% | |
| TAGAAGTTGGAGGTGATTGC+AGG | + | chr7_3:56318123-56318142 | None:intergenic | 45.0% | |
| AGTCTCTCAGTCTCAGTCAA+TGG | + | chr7_3:56318208-56318227 | None:intergenic | 45.0% | |
| TGTTCAGTGCGACCATGTTT+AGG | + | chr7_3:56318578-56318597 | None:intergenic | 45.0% | |
| AGCAGAACTTGTCTTAGGGT+GGG | + | chr7_3:56318606-56318625 | None:intergenic | 45.0% | |
| CATACGGTAGTTACTGTCTG+TGG | - | chr7_3:56318654-56318673 | Msa1110890:intron | 45.0% | |
| GAGACAGTTTGTCTTGTGCT+GGG | + | chr7_3:56318778-56318797 | None:intergenic | 45.0% | |
| ACTGAAACATCTAAGCTGGG+GGG | + | chr7_3:56318906-56318925 | None:intergenic | 45.0% | |
| GTTCACAGAACAACGGCATT+GGG | + | chr7_3:56319352-56319371 | None:intergenic | 45.0% | |
| CATGACATGCCTGAAAGTCA+AGG | + | chr7_3:56319374-56319393 | None:intergenic | 45.0% | |
| !!! | AGAAAAGTGCTTTTGCACGG+GGG | + | chr7_3:56319476-56319495 | None:intergenic | 45.0% |
| !!! | GAGAAAAGTGCTTTTGCACG+GGG | + | chr7_3:56319477-56319496 | None:intergenic | 45.0% |
| TGAGACCAAATCAGAGAGGA+TGG | - | chr7_3:56319557-56319576 | Msa1110890:CDS | 45.0% | |
| TCAACATTGTCGCAAACCAC+GGG | + | chr7_3:56319612-56319631 | None:intergenic | 45.0% | |
| ! | AGGATGAAGCTGATTTCCAC+AGG | - | chr7_3:56319664-56319683 | Msa1110890:intron | 45.0% |
| ! | CAACAGTTAGTTTCAGTGCC+AGG | + | chr7_3:56319749-56319768 | None:intergenic | 45.0% |
| TAATGTGCTTGCAGCATCAG+TGG | - | chr7_3:56319857-56319876 | Msa1110890:intron | 45.0% | |
| CTGGTGCATGATTAGAAGCA+AGG | + | chr7_3:56319917-56319936 | None:intergenic | 45.0% | |
| AACACGAAACTCTTCAGGCA+AGG | + | chr7_3:56320168-56320187 | None:intergenic | 45.0% | |
| ATCCATGGGCCAGTTTAGAA+CGG | - | chr7_3:56320211-56320230 | Msa1110890:intron | 45.0% | |
| !! | ATCCCTTTGGAACCTAGACA+TGG | - | chr7_3:56320343-56320362 | Msa1110890:intron | 45.0% |
| !! | TCCCTTTGGAACCTAGACAT+GGG | - | chr7_3:56320344-56320363 | Msa1110890:intron | 45.0% |
| TCCCATGTCTAGGTTCCAAA+GGG | + | chr7_3:56320348-56320367 | None:intergenic | 45.0% | |
| CTGTGCAATTCTGCTCAGTA+AGG | - | chr7_3:56320384-56320403 | Msa1110890:intron | 45.0% | |
| CAATTCTGCTCAGTAAGGCT+AGG | - | chr7_3:56320389-56320408 | Msa1110890:intron | 45.0% | |
| TCAGCCATAATTCCTGTGCT+TGG | - | chr7_3:56320444-56320463 | Msa1110890:intron | 45.0% | |
| AATTCCTGTGCTTGGATGTC+GGG | - | chr7_3:56320452-56320471 | Msa1110890:intron | 45.0% | |
| !!! | TTGCCGTTAGGGGGTATTTT+GGG | + | chr7_3:56320794-56320813 | None:intergenic | 45.0% |
| !!! | ATTGCCGTTAGGGGGTATTT+TGG | + | chr7_3:56320795-56320814 | None:intergenic | 45.0% |
| GGTAGTTAATTGCCGTTAGG+GGG | + | chr7_3:56320803-56320822 | None:intergenic | 45.0% | |
| CGGCAATTAACTACCATTCG+GGG | - | chr7_3:56320808-56320827 | Msa1110890:intron | 45.0% | |
| CAATTAACTACCATTCGGGG+AGG | - | chr7_3:56320811-56320830 | Msa1110890:intron | 45.0% | |
| CCATTCGGCACCCTTTAAAT+CGG | + | chr7_3:56320875-56320894 | None:intergenic | 45.0% | |
| ! | AACTACCGTTTTGCAGCGAA+CGG | - | chr7_3:56320900-56320919 | Msa1110890:CDS | 45.0% |
| AAACACCGTTCGCTGCAAAA+CGG | + | chr7_3:56320908-56320927 | None:intergenic | 45.0% | |
| ! | ATTGCTGTTCAGTAGGTGAC+TGG | - | chr7_3:56320929-56320948 | Msa1110890:CDS | 45.0% |
| ! | TTGCTGTTCAGTAGGTGACT+GGG | - | chr7_3:56320930-56320949 | Msa1110890:CDS | 45.0% |
| !!! | GACCGGGGCAATTTTTTAAG+AGG | + | chr7_3:56320994-56321013 | None:intergenic | 45.0% |
| AAAATTGCCCCGGTCCAATA+TGG | - | chr7_3:56320999-56321018 | Msa1110890:CDS | 45.0% | |
| AAATTGCCCCGGTCCAATAT+GGG | - | chr7_3:56321000-56321019 | Msa1110890:CDS | 45.0% | |
| !! | TAATAATAATAATTAATAAC+TGG | + | chr7_3:56315048-56315067 | None:intergenic | 5.0% |
| !!! | TTAAATTTTAATTAATTTTC+AGG | - | chr7_3:56318061-56318080 | Msa1110890:intron | 5.0% |
| AAAACGACGATGAAGAGCGG+TGG | - | chr7_3:56315181-56315200 | Msa1110890:three_prime_UTR | 50.0% | |
| ACGATGAAGAGCGGTGGTTT+GGG | - | chr7_3:56315187-56315206 | Msa1110890:three_prime_UTR | 50.0% | |
| GTTCCTCTCGTCTTCCTTCT+CGG | - | chr7_3:56315301-56315320 | Msa1110890:three_prime_UTR | 50.0% | |
| AACTGTTGTGGAGACCGAGA+AGG | + | chr7_3:56315318-56315337 | None:intergenic | 50.0% | |
| TGTCGGACATGGACACATGT+TGG | - | chr7_3:56315864-56315883 | Msa1110890:CDS | 50.0% | |
| GCATGAACACTTCAGATCGC+AGG | + | chr7_3:56315902-56315921 | None:intergenic | 50.0% | |
| CTTGGCCAAACTGGATTACC+AGG | + | chr7_3:56316004-56316023 | None:intergenic | 50.0% | |
| GGTGGAGCTCATAATCCACT+TGG | - | chr7_3:56316095-56316114 | Msa1110890:CDS | 50.0% | |
| TCCACTTGGGCACAATTGCT+TGG | - | chr7_3:56316109-56316128 | Msa1110890:CDS | 50.0% | |
| ACCAAGCAATTGTGCCCAAG+TGG | + | chr7_3:56316113-56316132 | None:intergenic | 50.0% | |
| TTCTGCGGGATACTGTGTCA+CGG | - | chr7_3:56316718-56316737 | Msa1110890:intron | 50.0% | |
| CAGAGAACCTTGGGAAGAGT+TGG | + | chr7_3:56317066-56317085 | None:intergenic | 50.0% | |
| TCTGGAGGAATCTGTGTGTC+CGG | + | chr7_3:56317365-56317384 | None:intergenic | 50.0% | |
| CTCAACTAGGGGATGGGAAT+GGG | + | chr7_3:56317529-56317548 | None:intergenic | 50.0% | |
| TCTCAACTAGGGGATGGGAA+TGG | + | chr7_3:56317530-56317549 | None:intergenic | 50.0% | |
| CTCAAGTCTCAACTAGGGGA+TGG | + | chr7_3:56317536-56317555 | None:intergenic | 50.0% | |
| TCCCCTAGTTGAGACTTGAG+AGG | - | chr7_3:56317536-56317555 | Msa1110890:CDS | 50.0% | |
| ATCGGGTCGTAGGAAATCAG+AGG | - | chr7_3:56318391-56318410 | Msa1110890:intron | 50.0% | |
| CAGCAGAACTTGTCTTAGGG+TGG | + | chr7_3:56318607-56318626 | None:intergenic | 50.0% | |
| AAGTCGTGCGAGCTCACATA+CGG | - | chr7_3:56318638-56318657 | Msa1110890:intron | 50.0% | |
| ! | GCTGGGAGTTTTGCAATGCT+AGG | + | chr7_3:56318761-56318780 | None:intergenic | 50.0% |
| CGAGACAGTTTGTCTTGTGC+TGG | + | chr7_3:56318779-56318798 | None:intergenic | 50.0% | |
| ! | GAACAACGGCATTGGGTTTG+AGG | + | chr7_3:56319345-56319364 | None:intergenic | 50.0% |
| GGTTCACAGAACAACGGCAT+TGG | + | chr7_3:56319353-56319372 | None:intergenic | 50.0% | |
| GGGTTGAGACCAAATCAGAG+AGG | - | chr7_3:56319553-56319572 | Msa1110890:intron | 50.0% | |
| CAACATTGTCGCAAACCACG+GGG | + | chr7_3:56319611-56319630 | None:intergenic | 50.0% | |
| GGAATGCACTCTGTTTCCTG+TGG | + | chr7_3:56319683-56319702 | None:intergenic | 50.0% | |
| ! | GCCAAAGAGTTTTCACTGCC+TGG | - | chr7_3:56319728-56319747 | Msa1110890:intron | 50.0% |
| GCCAGGCAGTGAAAACTCTT+TGG | + | chr7_3:56319732-56319751 | None:intergenic | 50.0% | |
| ! | GTTCTAAACTGGCCCATGGA+TGG | + | chr7_3:56320212-56320231 | None:intergenic | 50.0% |
| ! | TTCCGTTCTAAACTGGCCCA+TGG | + | chr7_3:56320216-56320235 | None:intergenic | 50.0% |
| AGCGAGACTTGTCATCCCTT+TGG | - | chr7_3:56320330-56320349 | Msa1110890:intron | 50.0% | |
| CTCCCATGTCTAGGTTCCAA+AGG | + | chr7_3:56320349-56320368 | None:intergenic | 50.0% | |
| ATTCCTGTGCTTGGATGTCG+GGG | - | chr7_3:56320453-56320472 | Msa1110890:intron | 50.0% | |
| CAAACTCTCTCCACCTCACT+AGG | + | chr7_3:56320493-56320512 | None:intergenic | 50.0% | |
| CTAGTGAGGTGGAGAGAGTT+TGG | - | chr7_3:56320491-56320510 | Msa1110890:intron | 50.0% | |
| TTGGGCTGAGCTCAATGCAT+TGG | - | chr7_3:56320668-56320687 | Msa1110890:intron | 50.0% | |
| GAGCAATTGCTACGTGCCTA+AGG | + | chr7_3:56320754-56320773 | None:intergenic | 50.0% | |
| !! | CCGATTTAAAGGGTGCCGAA+TGG | - | chr7_3:56320872-56320891 | Msa1110890:CDS | 50.0% |
| CACACCTAGCAATTGCTCAC+AGG | + | chr7_3:56320958-56320977 | None:intergenic | 50.0% | |
| TATGTGGGGCCATCCCATAT+TGG | + | chr7_3:56321016-56321035 | None:intergenic | 50.0% | |
| TCTGAAGACCAGGCTATGTG+GGG | + | chr7_3:56321030-56321049 | None:intergenic | 50.0% | |
| ! | CTCTGAAGACCAGGCTATGT+GGG | + | chr7_3:56321031-56321050 | None:intergenic | 50.0% |
| ! | TCTCTGAAGACCAGGCTATG+TGG | + | chr7_3:56321032-56321051 | None:intergenic | 50.0% |
| GACGATGAAGAGCGGTGGTT+TGG | - | chr7_3:56315186-56315205 | Msa1110890:three_prime_UTR | 55.0% | |
| GGCGCGGTTCAATCATCGTA+CGG | - | chr7_3:56315208-56315227 | Msa1110890:three_prime_UTR | 55.0% | |
| TCAATCATCGTACGGCGTCC+CGG | - | chr7_3:56315216-56315235 | Msa1110890:three_prime_UTR | 55.0% | |
| GAAGACGAGAGGAACGAGCA+TGG | + | chr7_3:56315296-56315315 | None:intergenic | 55.0% | |
| AGACCGAGAAGGAAGACGAG+AGG | + | chr7_3:56315307-56315326 | None:intergenic | 55.0% | |
| !! | ACATGTGTCGGTGTCGGACA+TGG | - | chr7_3:56315853-56315872 | Msa1110890:CDS | 55.0% |
| ! | ACCTTTGGGTTTCCGGGGAA+AGG | - | chr7_3:56315975-56315994 | Msa1110890:CDS | 55.0% |
| ! | CCTTTGGGTTTCCGGGGAAA+GGG | - | chr7_3:56315976-56315995 | Msa1110890:CDS | 55.0% |
| ATTACCAGGGACCCTTTCCC+CGG | + | chr7_3:56315990-56316009 | None:intergenic | 55.0% | |
| GGGTCCCTGGTAATCCAGTT+TGG | - | chr7_3:56315996-56316015 | Msa1110890:CDS | 55.0% | |
| ! | AGGATGTGTCTGAGGTACGG+TGG | - | chr7_3:56316647-56316666 | Msa1110890:intron | 55.0% |
| AGGGGATGGGAATGGGTACA+TGG | + | chr7_3:56317522-56317541 | None:intergenic | 55.0% | |
| !! | ATGCAGTCCTTGGGAGCGTT+TGG | + | chr7_3:56317588-56317607 | None:intergenic | 55.0% |
| GATTGCAGGGCAGCATTAGG+TGG | + | chr7_3:56318109-56318128 | None:intergenic | 55.0% | |
| GGTGATTGCAGGGCAGCATT+AGG | + | chr7_3:56318112-56318131 | None:intergenic | 55.0% | |
| ! | CACGGGGACTGATTTAGCTC+TGG | + | chr7_3:56319595-56319614 | None:intergenic | 55.0% |
| CAGAGCTAAATCAGTCCCCG+TGG | - | chr7_3:56319593-56319612 | Msa1110890:CDS | 55.0% | |
| GGTGCCTGTGAGCAATTGCT+AGG | - | chr7_3:56320951-56320970 | Msa1110890:CDS | 55.0% | |
| CCCTTTCCCCGGAAACCCAA+AGG | + | chr7_3:56315979-56315998 | None:intergenic | 60.0% | |
| TTGGCGCACTTGTCTGCACC+AGG | - | chr7_3:56317771-56317790 | Msa1110890:intron | 60.0% | |
| TGCAGGGCAGCATTAGGTGG+CGG | + | chr7_3:56318106-56318125 | None:intergenic | 60.0% | |
| CAACCCCGACATCCAAGCAC+AGG | + | chr7_3:56320459-56320478 | None:intergenic | 60.0% | |
| TGCCCCGGTCCAATATGGGA+TGG | - | chr7_3:56321004-56321023 | Msa1110890:CDS | 60.0% | |
| GGCCATCCCATATTGGACCG+GGG | + | chr7_3:56321009-56321028 | None:intergenic | 60.0% | |
| GGGCCATCCCATATTGGACC+GGG | + | chr7_3:56321010-56321029 | None:intergenic | 60.0% | |
| GGGGCCATCCCATATTGGAC+CGG | + | chr7_3:56321011-56321030 | None:intergenic | 60.0% | |
| ! | GAAGAGCGGTGGTTTGGGCG+CGG | - | chr7_3:56315192-56315211 | Msa1110890:three_prime_UTR | 65.0% |
| CTCTCCACCGTCGTTTCGCC+GGG | + | chr7_3:56315237-56315256 | None:intergenic | 65.0% | |
| CCTCTCCACCGTCGTTTCGC+CGG | + | chr7_3:56315238-56315257 | None:intergenic | 65.0% | |
| GTTTCCGGGGAAAGGGTCCC+TGG | - | chr7_3:56315983-56316002 | Msa1110890:CDS | 65.0% | |
| ! | GCAGCATTAGGTGGCGGTGG+CGG | + | chr7_3:56318100-56318119 | None:intergenic | 65.0% |
| ! | AGGGCAGCATTAGGTGGCGG+TGG | + | chr7_3:56318103-56318122 | None:intergenic | 65.0% |
| TGGGATGGCCCCACATAGCC+TGG | - | chr7_3:56321019-56321038 | Msa1110890:exon | 65.0% | |
| ACGGCGTCCCGGCGAAACGA+CGG | - | chr7_3:56315227-56315246 | Msa1110890:three_prime_UTR | 70.0% | |
| CCGGCGAAACGACGGTGGAG+AGG | - | chr7_3:56315235-56315254 | Msa1110890:three_prime_UTR | 70.0% | |
| ! | GCATTAGGTGGCGGTGGCGG+CGG | + | chr7_3:56318097-56318116 | None:intergenic | 70.0% |
| GCGTCCCGGCGAAACGACGG+TGG | - | chr7_3:56315230-56315249 | Msa1110890:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 56314959 | 56321256 | 56314959 | ID=Msa1110890;Name=Msa1110890 |
| chr7_3 | mRNA | 56314959 | 56321256 | 56314959 | ID=Msa1110890-mRNA-1;Parent=Msa1110890;Name=Msa1110890-mRNA-1;_AED=0.25;_eAED=0.25;_QI=231|0.87|0.88|1|1|1|9|688|461 |
| chr7_3 | exon | 56314959 | 56316210 | 56314959 | ID=Msa1110890-mRNA-1:exon:11899;Parent=Msa1110890-mRNA-1 |
| chr7_3 | exon | 56316601 | 56316661 | 56316601 | ID=Msa1110890-mRNA-1:exon:11898;Parent=Msa1110890-mRNA-1 |
| chr7_3 | exon | 56317342 | 56317658 | 56317342 | ID=Msa1110890-mRNA-1:exon:11897;Parent=Msa1110890-mRNA-1 |
| chr7_3 | exon | 56318071 | 56318132 | 56318071 | ID=Msa1110890-mRNA-1:exon:11896;Parent=Msa1110890-mRNA-1 |
| chr7_3 | exon | 56318224 | 56318293 | 56318224 | ID=Msa1110890-mRNA-1:exon:11895;Parent=Msa1110890-mRNA-1 |
| chr7_3 | exon | 56319138 | 56319197 | 56319138 | ID=Msa1110890-mRNA-1:exon:11894;Parent=Msa1110890-mRNA-1 |
| chr7_3 | exon | 56319555 | 56319614 | 56319555 | ID=Msa1110890-mRNA-1:exon:11893;Parent=Msa1110890-mRNA-1 |
| chr7_3 | exon | 56319737 | 56319768 | 56319737 | ID=Msa1110890-mRNA-1:exon:11892;Parent=Msa1110890-mRNA-1 |
| chr7_3 | exon | 56320866 | 56321256 | 56320866 | ID=Msa1110890-mRNA-1:exon:11891;Parent=Msa1110890-mRNA-1 |
| chr7_3 | five_prime_UTR | 56321026 | 56321256 | 56321026 | ID=Msa1110890-mRNA-1:five_prime_utr;Parent=Msa1110890-mRNA-1 |
| chr7_3 | CDS | 56320866 | 56321025 | 56320866 | ID=Msa1110890-mRNA-1:cds;Parent=Msa1110890-mRNA-1 |
| chr7_3 | CDS | 56319737 | 56319768 | 56319737 | ID=Msa1110890-mRNA-1:cds;Parent=Msa1110890-mRNA-1 |
| chr7_3 | CDS | 56319555 | 56319614 | 56319555 | ID=Msa1110890-mRNA-1:cds;Parent=Msa1110890-mRNA-1 |
| chr7_3 | CDS | 56319138 | 56319197 | 56319138 | ID=Msa1110890-mRNA-1:cds;Parent=Msa1110890-mRNA-1 |
| chr7_3 | CDS | 56318224 | 56318293 | 56318224 | ID=Msa1110890-mRNA-1:cds;Parent=Msa1110890-mRNA-1 |
| chr7_3 | CDS | 56318071 | 56318132 | 56318071 | ID=Msa1110890-mRNA-1:cds;Parent=Msa1110890-mRNA-1 |
| chr7_3 | CDS | 56317342 | 56317658 | 56317342 | ID=Msa1110890-mRNA-1:cds;Parent=Msa1110890-mRNA-1 |
| chr7_3 | CDS | 56316601 | 56316661 | 56316601 | ID=Msa1110890-mRNA-1:cds;Parent=Msa1110890-mRNA-1 |
| chr7_3 | CDS | 56315647 | 56316210 | 56315647 | ID=Msa1110890-mRNA-1:cds;Parent=Msa1110890-mRNA-1 |
| chr7_3 | three_prime_UTR | 56314959 | 56315646 | 56314959 | ID=Msa1110890-mRNA-1:three_prime_utr;Parent=Msa1110890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
