Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027330 | XP_003623702.1 | 81.624 | 234 | 41 | 1 | 226 | 457 | 322 | 555 | 8.26e-113 | 356 |
| Msa1027330 | XP_003623702.1 | 94.964 | 278 | 14 | 0 | 1 | 278 | 1 | 278 | 0.0 | 533 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027330 | sp|Q9ZVI7|GAUT7_ARATH | 42.724 | 323 | 144 | 9 | 18 | 322 | 15 | 314 | 1.17e-60 | 211 |
| Msa1027330 | sp|Q9ZVI7|GAUT7_ARATH | 59.016 | 183 | 71 | 2 | 276 | 458 | 352 | 530 | 4.08e-57 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027330 | A2Q3W2 | 81.624 | 234 | 41 | 1 | 226 | 457 | 322 | 555 | 3.95e-113 | 356 |
| Msa1027330 | A2Q3W2 | 94.964 | 278 | 14 | 0 | 1 | 278 | 1 | 278 | 0.0 | 533 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0605530 | Msa1027330 | 0.808517 | 2.978847e-50 | -8.615850e-47 |
| Msa1027330 | Msa1027390 | 0.956501 | 2.540899e-114 | -8.615850e-47 |
| Msa1027330 | Msa1077980 | 0.894023 | 3.640198e-75 | -8.615850e-47 |
| Msa1027330 | Msa1110890 | 0.810705 | 1.009330e-50 | -8.615850e-47 |
| Msa1027330 | Msa1446670 | 0.802450 | 5.577182e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027330 | MtrunA17_Chr7g0245621 | 94.964 | 278 | 14 | 0 | 1 | 278 | 1 | 278 | 0.0 | 533 |
| Msa1027330 | MtrunA17_Chr7g0245621 | 81.624 | 234 | 41 | 1 | 226 | 457 | 322 | 555 | 7.60e-117 | 356 |
| Msa1027330 | MtrunA17_Chr2g0290961 | 36.464 | 181 | 104 | 4 | 280 | 449 | 390 | 570 | 6.76e-33 | 132 |
| Msa1027330 | MtrunA17_Chr8g0383241 | 35.979 | 189 | 93 | 4 | 279 | 449 | 216 | 394 | 9.96e-33 | 129 |
| Msa1027330 | MtrunA17_Chr2g0277591 | 35.484 | 186 | 99 | 4 | 280 | 449 | 258 | 438 | 1.73e-29 | 120 |
| Msa1027330 | MtrunA17_Chr7g0246371 | 33.679 | 193 | 101 | 3 | 279 | 451 | 384 | 569 | 3.56e-29 | 120 |
| Msa1027330 | MtrunA17_Chr8g0351091 | 32.474 | 194 | 102 | 4 | 280 | 451 | 331 | 517 | 8.43e-28 | 116 |
| Msa1027330 | MtrunA17_Chr4g0061711 | 35.714 | 182 | 103 | 4 | 280 | 449 | 260 | 439 | 2.09e-27 | 115 |
| Msa1027330 | MtrunA17_Chr7g0235161 | 34.409 | 186 | 106 | 3 | 279 | 449 | 279 | 463 | 1.53e-26 | 112 |
| Msa1027330 | MtrunA17_Chr2g0283461 | 33.333 | 186 | 103 | 4 | 280 | 449 | 258 | 438 | 3.04e-26 | 111 |
| Msa1027330 | MtrunA17_Chr2g0319311 | 32.020 | 203 | 111 | 5 | 280 | 455 | 246 | 448 | 3.19e-25 | 108 |
| Msa1027330 | MtrunA17_Chr3g0138381 | 29.231 | 195 | 109 | 4 | 279 | 451 | 383 | 570 | 7.22e-25 | 107 |
| Msa1027330 | MtrunA17_Chr7g0218571 | 33.654 | 208 | 101 | 6 | 280 | 455 | 242 | 444 | 9.39e-25 | 107 |
| Msa1027330 | MtrunA17_Chr2g0308241 | 32.222 | 180 | 112 | 4 | 280 | 449 | 260 | 439 | 5.42e-24 | 104 |
| Msa1027330 | MtrunA17_Chr3g0097091 | 29.167 | 192 | 119 | 3 | 280 | 454 | 242 | 433 | 7.52e-24 | 104 |
| Msa1027330 | MtrunA17_Chr6g0456071 | 32.086 | 187 | 110 | 4 | 279 | 449 | 273 | 458 | 8.27e-23 | 101 |
| Msa1027330 | MtrunA17_Chr4g0076011 | 29.907 | 214 | 110 | 7 | 280 | 455 | 169 | 380 | 1.11e-21 | 97.4 |
| Msa1027330 | MtrunA17_Chr7g0260711 | 30.851 | 188 | 103 | 5 | 280 | 458 | 397 | 566 | 1.14e-21 | 98.2 |
| Msa1027330 | MtrunA17_Chr1g0184751 | 34.066 | 182 | 91 | 5 | 280 | 451 | 340 | 502 | 8.53e-19 | 89.4 |
| Msa1027330 | MtrunA17_Chr6g0454101 | 34.300 | 207 | 105 | 6 | 278 | 455 | 235 | 439 | 4.18e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027330 | AT2G38650.3 | 42.724 | 323 | 144 | 9 | 18 | 322 | 15 | 314 | 1.43e-62 | 212 |
| Msa1027330 | AT2G38650.3 | 59.890 | 182 | 69 | 2 | 276 | 457 | 352 | 529 | 1.50e-59 | 204 |
| Msa1027330 | AT2G38650.2 | 42.724 | 323 | 144 | 9 | 18 | 322 | 15 | 314 | 1.19e-61 | 211 |
| Msa1027330 | AT2G38650.2 | 59.016 | 183 | 71 | 2 | 276 | 458 | 352 | 530 | 4.15e-58 | 202 |
| Msa1027330 | AT2G38650.1 | 42.724 | 323 | 144 | 9 | 18 | 322 | 15 | 314 | 1.19e-61 | 211 |
| Msa1027330 | AT2G38650.1 | 59.016 | 183 | 71 | 2 | 276 | 458 | 352 | 530 | 4.15e-58 | 202 |
| Msa1027330 | AT5G47780.1 | 38.587 | 184 | 102 | 5 | 279 | 451 | 338 | 521 | 4.54e-32 | 129 |
| Msa1027330 | AT4G38270.2 | 32.812 | 192 | 100 | 4 | 280 | 449 | 395 | 579 | 1.28e-28 | 119 |
| Msa1027330 | AT4G38270.1 | 32.812 | 192 | 100 | 4 | 280 | 449 | 399 | 583 | 1.37e-28 | 119 |
| Msa1027330 | AT1G06780.1 | 37.912 | 182 | 82 | 5 | 280 | 449 | 330 | 492 | 3.77e-28 | 117 |
| Msa1027330 | AT3G61130.1 | 32.432 | 185 | 113 | 4 | 279 | 451 | 394 | 578 | 4.99e-28 | 117 |
| Msa1027330 | AT1G06780.2 | 37.912 | 182 | 82 | 5 | 280 | 449 | 343 | 505 | 5.27e-28 | 117 |
| Msa1027330 | AT3G01040.2 | 36.098 | 205 | 100 | 5 | 280 | 455 | 237 | 439 | 2.76e-26 | 112 |
| Msa1027330 | AT3G01040.3 | 36.098 | 205 | 100 | 5 | 280 | 455 | 237 | 439 | 2.76e-26 | 112 |
| Msa1027330 | AT5G54690.1 | 33.005 | 203 | 109 | 5 | 280 | 455 | 239 | 441 | 4.16e-26 | 111 |
| Msa1027330 | AT2G30575.1 | 35.556 | 180 | 89 | 5 | 280 | 449 | 351 | 513 | 5.90e-26 | 111 |
| Msa1027330 | AT3G25140.1 | 34.409 | 186 | 106 | 3 | 279 | 449 | 278 | 462 | 8.86e-26 | 110 |
| Msa1027330 | AT5G15470.1 | 33.659 | 205 | 105 | 5 | 280 | 455 | 237 | 439 | 1.56e-24 | 106 |
| Msa1027330 | AT1G18580.1 | 31.319 | 182 | 113 | 4 | 280 | 449 | 260 | 441 | 6.94e-24 | 104 |
| Msa1027330 | AT2G46480.3 | 34.946 | 186 | 106 | 5 | 279 | 449 | 258 | 443 | 7.93e-22 | 98.6 |
| Msa1027330 | AT2G46480.4 | 34.946 | 186 | 106 | 5 | 279 | 449 | 271 | 456 | 8.45e-22 | 98.6 |
| Msa1027330 | AT3G01040.1 | 33.690 | 187 | 96 | 5 | 280 | 455 | 237 | 406 | 1.67e-21 | 97.4 |
| Msa1027330 | AT3G58790.2 | 28.500 | 200 | 118 | 3 | 280 | 454 | 114 | 313 | 9.82e-21 | 94.4 |
| Msa1027330 | AT3G58790.1 | 28.500 | 200 | 118 | 3 | 280 | 454 | 246 | 445 | 3.49e-20 | 93.6 |
| Msa1027330 | AT2G20810.1 | 36.413 | 184 | 102 | 4 | 280 | 449 | 259 | 441 | 6.68e-19 | 89.7 |
| Msa1027330 | AT3G02350.1 | 32.653 | 196 | 97 | 5 | 279 | 449 | 279 | 464 | 1.85e-17 | 85.5 |
| Msa1027330 | AT2G46480.2 | 31.667 | 180 | 95 | 5 | 279 | 449 | 258 | 418 | 3.98e-15 | 78.2 |
| Msa1027330 | AT2G46480.1 | 31.667 | 180 | 95 | 5 | 279 | 449 | 271 | 431 | 4.21e-15 | 77.8 |
Find 153 sgRNAs with CRISPR-Local
Find 437 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTGATTTAACCGATTTAA+AGG | 0.192975 | 7_1:-59646928 | Msa1027330:three_prime_UTR |
| CCTCAGACACATCCTCTTTA+TGG | 0.206165 | 7_1:+59651332 | None:intergenic |
| GATCTGCGTTATGATAATTT+TGG | 0.219694 | 7_1:-59647404 | Msa1027330:three_prime_UTR |
| TCATCAGCAGAACTTGTCTT+AGG | 0.221662 | 7_1:+59649364 | None:intergenic |
| GTCTTACTCAAACTTATAAA+AGG | 0.233256 | 7_1:-59647459 | Msa1027330:CDS |
| GGTCAATTGAAAGGTTATTT+AGG | 0.241667 | 7_1:-59647562 | Msa1027330:CDS |
| AAAATTGCCCCGGTCCAATA+TGG | 0.258905 | 7_1:-59646790 | Msa1027330:three_prime_UTR |
| TTCAATTTGCTGAATATATC+AGG | 0.273389 | 7_1:+59647700 | None:intergenic |
| TGTTTAGGATTATGAACTTT+AGG | 0.280446 | 7_1:+59649412 | None:intergenic |
| GTTCCTCTCGTCTTCCTTCT+CGG | 0.292503 | 7_1:-59652671 | Msa1027330:CDS |
| TGGTTCAAGAGGAACAATTA+TGG | 0.313905 | 7_1:-59647904 | Msa1027330:CDS |
| TCCAATATTATTTCCATTGT+TGG | 0.316834 | 7_1:-59653033 | None:intergenic |
| AAATGTATTCCGTTCTAAAC+TGG | 0.321203 | 7_1:+59647752 | None:intergenic |
| ATTGAAGAAAGTTGTTGTTC+TGG | 0.326019 | 7_1:-59647683 | Msa1027330:CDS |
| TAATAATAATAATTAATAAC+TGG | 0.331335 | 7_1:+59652931 | None:intergenic |
| AATTCCTGTGCTTGGATGTC+GGG | 0.331896 | 7_1:-59647520 | Msa1027330:CDS |
| ACATCCAAGCACAGGAATTA+TGG | 0.332444 | 7_1:+59647524 | None:intergenic |
| AACATCCATCCTCTCTGATT+TGG | 0.333242 | 7_1:+59648410 | None:intergenic |
| ACAAGTTCTGCTGATGAAAC+TGG | 0.340120 | 7_1:-59649358 | Msa1027330:CDS |
| GCTGAGTGAGGAAGTTAGTT+TGG | 0.340298 | 7_1:+59653001 | None:intergenic |
| CGAGACAGTTTGTCTTGTGC+TGG | 0.341179 | 7_1:+59649196 | None:intergenic |
| TGTTCAGTGCGACCATGTTT+AGG | 0.343385 | 7_1:+59649397 | None:intergenic |
| GACGATGAAGAGCGGTGGTT+TGG | 0.349080 | 7_1:-59652786 | Msa1027330:exon |
| AATTATCATAACGCAGATCT+AGG | 0.349343 | 7_1:+59647408 | None:intergenic |
| GGTTCAAGAGGAACAATTAT+GGG | 0.352318 | 7_1:-59647903 | Msa1027330:CDS |
| ATTTCAGGTAAGTCGGAATC+AGG | 0.354076 | 7_1:-59647974 | Msa1027330:intron |
| ATTATTATGCAATGAAGCTT+TGG | 0.355164 | 7_1:-59647924 | Msa1027330:CDS |
| TAGAAGTTGGAGGTGATTGC+AGG | 0.365442 | 7_1:+59649852 | None:intergenic |
| TTTAGGGTAATTTGAGGTGC+TGG | 0.377897 | 7_1:+59647014 | None:intergenic |
| GGTGATTGCAGGGCAGCATT+AGG | 0.392037 | 7_1:+59649863 | None:intergenic |
| AGCGAGACTTGTCATCCCTT+TGG | 0.392190 | 7_1:-59647642 | Msa1027330:CDS |
| CTAGTGAGGTGGAGAGAGTT+TGG | 0.394979 | 7_1:-59647481 | Msa1027330:CDS |
| ACGATGAAGAGCGGTGGTTT+GGG | 0.395173 | 7_1:-59652785 | Msa1027330:CDS |
| TAGTAGTAGAGGAGTCAAAT+TGG | 0.398638 | 7_1:-59647140 | Msa1027330:three_prime_UTR |
| CTGAGTGAGGAAGTTAGTTT+GGG | 0.403684 | 7_1:+59653002 | None:intergenic |
| ACGGCAATTAACTACCATTC+GGG | 0.412981 | 7_1:-59646982 | Msa1027330:three_prime_UTR |
| CCATTCGGCATCCTTTAAAT+CGG | 0.418004 | 7_1:+59646917 | None:intergenic |
| AAAGGTTATTTAGGTGAGAA+AGG | 0.419292 | 7_1:-59647553 | Msa1027330:CDS |
| TAAATTTACTAGAATTATCA+AGG | 0.419670 | 7_1:-59646732 | Msa1027330:three_prime_UTR |
| GCATTAGGTGGCGGTGGCGG+CGG | 0.424131 | 7_1:+59649878 | None:intergenic |
| CGAACATCATGTCTATTGTA+TGG | 0.424864 | 7_1:+59651355 | None:intergenic |
| AACGGCAATTAACTACCATT+CGG | 0.426161 | 7_1:-59646983 | Msa1027330:three_prime_UTR |
| CCTCTCCACCGTCGTTTCGC+CGG | 0.428269 | 7_1:+59652737 | None:intergenic |
| GGTCTCATCATTGCAGTTCT+CGG | 0.431074 | 7_1:-59652716 | Msa1027330:CDS |
| GTTGAAAGACCAACTATTTG+TGG | 0.435282 | 7_1:-59649251 | Msa1027330:CDS |
| ATTGCTGTTCAGTAGGTGAC+TGG | 0.436938 | 7_1:-59646860 | Msa1027330:three_prime_UTR |
| ATTATTGGATATAGCAGTAC+TGG | 0.443491 | 7_1:-59647373 | Msa1027330:three_prime_UTR |
| AATGAAACACGAAACTCTTC+AGG | 0.443659 | 7_1:+59647802 | None:intergenic |
| CTCTGAAGACCAGGCTATGT+GGG | 0.450075 | 7_1:+59646761 | None:intergenic |
| AATGGTAGTTAATTGCCGTT+AGG | 0.452830 | 7_1:+59646986 | None:intergenic |
| TCAACCATAATTCCTGTGCT+TGG | 0.459068 | 7_1:-59647528 | Msa1027330:CDS |
| CATCAGCAGAACTTGTCTTA+GGG | 0.459464 | 7_1:+59649365 | None:intergenic |
| TATATTCGTACATTAGAAGT+TGG | 0.462976 | 7_1:+59649839 | None:intergenic |
| AAATTGCCCCGGTCCAATAT+GGG | 0.466152 | 7_1:-59646789 | Msa1027330:three_prime_UTR |
| AACGGTAGTTAATTGCCATT+CGG | 0.483069 | 7_1:+59646902 | None:intergenic |
| TTATAAAAGGTTGATAAAAG+AGG | 0.486751 | 7_1:-59647446 | Msa1027330:CDS |
| CTCTCCACCGTCGTTTCGCC+GGG | 0.488637 | 7_1:+59652738 | None:intergenic |
| CCCAACAAAATGAATGTACT+AGG | 0.488924 | 7_1:-59647089 | Msa1027330:three_prime_UTR |
| GCAGCATTAGGTGGCGGTGG+CGG | 0.490926 | 7_1:+59649875 | None:intergenic |
| CAAACTCTCTCCACCTCACT+AGG | 0.492527 | 7_1:+59647482 | None:intergenic |
| TATAGCTGTGGTAGTAGTAG+AGG | 0.494972 | 7_1:-59647151 | Msa1027330:three_prime_UTR |
| TAATTCCTGTGCTTGGATGT+CGG | 0.498474 | 7_1:-59647521 | Msa1027330:CDS |
| ATGGTAGTTAATTGCCGTTA+GGG | 0.498823 | 7_1:+59646987 | None:intergenic |
| AAAACAGAGTATACAAGAGC+TGG | 0.502955 | 7_1:-59649167 | Msa1027330:CDS |
| GGGGCCATCCCATATTGGAC+CGG | 0.503675 | 7_1:+59646781 | None:intergenic |
| CTCCCATGTCTAGGTTCCAA+AGG | 0.505256 | 7_1:+59647626 | None:intergenic |
| TGGGATGGCCCCACATAGCC+TGG | 0.508262 | 7_1:-59646770 | Msa1027330:three_prime_UTR |
| CTGTGCAATTCTGCTCAGTA+AGG | 0.509200 | 7_1:-59647588 | Msa1027330:CDS |
| CAGAGAACCTTGGGAAGAGT+TGG | 0.510880 | 7_1:+59650908 | None:intergenic |
| AAGCTCTAGCCACAAATAGT+TGG | 0.514605 | 7_1:+59649242 | None:intergenic |
| GGGCCATCCCATATTGGACC+GGG | 0.515183 | 7_1:+59646782 | None:intergenic |
| AGTAGTAGAGGAGTCAAATT+GGG | 0.515203 | 7_1:-59647139 | Msa1027330:three_prime_UTR |
| CAGTTATGATAATCCATCCA+TGG | 0.516556 | 7_1:-59647776 | Msa1027330:CDS |
| AAACACCGTTCGCTGCAAAA+CGG | 0.517951 | 7_1:+59646884 | None:intergenic |
| GAAGAGCGGTGGTTTGGGCG+CGG | 0.519255 | 7_1:-59652780 | Msa1027330:CDS |
| GGCGCGGTTCAATCATCGTA+CGG | 0.521842 | 7_1:-59652764 | Msa1027330:CDS |
| GTTCTAAACTGGCCCATGGA+TGG | 0.523266 | 7_1:+59647763 | None:intergenic |
| GTTCTGAAGAATTATTCTAA+AGG | 0.524642 | 7_1:-59650047 | Msa1027330:CDS |
| TCCCATGTCTAGGTTCCAAA+GGG | 0.527041 | 7_1:+59647627 | None:intergenic |
| GAGCAATTGCTACGTGCCTA+AGG | 0.530701 | 7_1:+59647038 | None:intergenic |
| TCAATCATCGTACGGCGTCC+CGG | 0.531968 | 7_1:-59652756 | Msa1027330:CDS |
| TGCAGGGCAGCATTAGGTGG+CGG | 0.532715 | 7_1:+59649869 | None:intergenic |
| GTGTTTAATTGCTGTTCAGT+AGG | 0.536203 | 7_1:-59646867 | Msa1027330:three_prime_UTR |
| GAAGACGAGAGGAACGAGCA+TGG | 0.536352 | 7_1:+59652679 | None:intergenic |
| GTCTTTCAACTTCTTAACCA+TGG | 0.538036 | 7_1:+59649264 | None:intergenic |
| AGGGCAGCATTAGGTGGCGG+TGG | 0.539778 | 7_1:+59649872 | None:intergenic |
| GGGGTATTTAGGGTAATTTG+AGG | 0.539879 | 7_1:+59647008 | None:intergenic |
| CAATGAAGCTTTGGTTCAAG+AGG | 0.541078 | 7_1:-59647915 | Msa1027330:CDS |
| TCTCTGAAGACCAGGCTATG+TGG | 0.543325 | 7_1:+59646760 | None:intergenic |
| TGAGACCAAATCAGAGAGGA+TGG | 0.545417 | 7_1:-59648415 | Msa1027330:CDS |
| AAGTCGTGCGAGCTCACATA+CGG | 0.545885 | 7_1:-59649334 | Msa1027330:CDS |
| TTGGGCTGAGCTCAATGCAT+TGG | 0.548540 | 7_1:-59647121 | Msa1027330:three_prime_UTR |
| GTTTGAACCAACTCTTCCCA+AGG | 0.550559 | 7_1:-59650915 | Msa1027330:intron |
| ACATGATGTTCGCCATAAAG+AGG | 0.551438 | 7_1:-59651344 | Msa1027330:CDS |
| TATGTGGGGCCATCCCATAT+TGG | 0.553860 | 7_1:+59646776 | None:intergenic |
| GATTGCAGGGCAGCATTAGG+TGG | 0.556142 | 7_1:+59649866 | None:intergenic |
| CAATTCTGCTCAGTAAGGCT+AGG | 0.558632 | 7_1:-59647583 | Msa1027330:CDS |
| CAGCAGAACTTGTCTTAGGG+TGG | 0.560339 | 7_1:+59649368 | None:intergenic |
| TATTCTAAAGGAGACAAGAA+TGG | 0.560838 | 7_1:-59650035 | Msa1027330:CDS |
| ATTCGTACATTAGAAGTTGG+AGG | 0.563574 | 7_1:+59649842 | None:intergenic |
| TTAACTATTCTCTGAAGACC+AGG | 0.565003 | 7_1:+59646752 | None:intergenic |
| GAGACAGTTTGTCTTGTGCT+GGG | 0.565251 | 7_1:+59649197 | None:intergenic |
| ATTATCATAACGCAGATCTA+GGG | 0.565630 | 7_1:+59647409 | None:intergenic |
| TTCCGTTCTAAACTGGCCCA+TGG | 0.569222 | 7_1:+59647759 | None:intergenic |
| GCTCAATATTTCAGGTAAGT+CGG | 0.574027 | 7_1:-59647981 | Msa1027330:intron |
| GGTGCCTGTGAGCAATTGCT+AGG | 0.575074 | 7_1:-59646838 | Msa1027330:three_prime_UTR |
| ACGGCGTCCCGGCGAAACGA+CGG | 0.577353 | 7_1:-59652745 | Msa1027330:CDS |
| TTGGGTTGATCTGCCAACAA+TGG | 0.581556 | 7_1:+59653020 | None:intergenic |
| CCGATTTAAAGGATGCCGAA+TGG | 0.586954 | 7_1:-59646917 | Msa1027330:three_prime_UTR |
| CACACCTAGCAATTGCTCAC+AGG | 0.589409 | 7_1:+59646834 | None:intergenic |
| TTGCTGTTCAGTAGGTGACT+GGG | 0.593460 | 7_1:-59646859 | Msa1027330:three_prime_UTR |
| AGCAGAACTTGTCTTAGGGT+GGG | 0.594888 | 7_1:+59649369 | None:intergenic |
| ATCCCTTTGGAACCTAGACA+TGG | 0.597008 | 7_1:-59647629 | Msa1027330:CDS |
| ATCCATGGGCCAGTTTAGAA+CGG | 0.597269 | 7_1:-59647761 | Msa1027330:CDS |
| CCGGCGAAACGACGGTGGAG+AGG | 0.597288 | 7_1:-59652737 | Msa1027330:CDS |
| AGTTATGATAATCCATCCAT+GGG | 0.597691 | 7_1:-59647775 | Msa1027330:CDS |
| TGAACAGAGAAATACTCCTC+CGG | 0.598968 | 7_1:-59651514 | Msa1027330:intron |
| AGATAAATCAAGTCATGTGA+AGG | 0.603002 | 7_1:-59650951 | Msa1027330:CDS |
| ATTATATCAGCTTACAGTGG+TGG | 0.603346 | 7_1:+59649106 | None:intergenic |
| AATCAATCAACCGCTGAGTG+AGG | 0.604146 | 7_1:+59652989 | None:intergenic |
| CAACCCCGACATCCAAGCAC+AGG | 0.604325 | 7_1:+59647516 | None:intergenic |
| GTTCAAGAGGAACAATTATG+GGG | 0.611068 | 7_1:-59647902 | Msa1027330:CDS |
| AGAAGTTGGAGGTGATTGCA+GGG | 0.611391 | 7_1:+59649853 | None:intergenic |
| TGAACATAATTGACCTAGTG+AGG | 0.613070 | 7_1:-59647495 | Msa1027330:CDS |
| AGGTTGATAAAAGAGGTTAG+TGG | 0.618261 | 7_1:-59647439 | Msa1027330:CDS |
| AACACGAAACTCTTCAGGCA+AGG | 0.619209 | 7_1:+59647807 | None:intergenic |
| AGAAGTTATGAAAGACGCCA+TGG | 0.620598 | 7_1:-59649281 | Msa1027330:CDS |
| TGCCCCGGTCCAATATGGGA+TGG | 0.621817 | 7_1:-59646785 | Msa1027330:three_prime_UTR |
| GGTAGTTAATTGCCGTTAGG+GGG | 0.621837 | 7_1:+59646989 | None:intergenic |
| GTAAGGCTAGGTCAATTGAA+AGG | 0.623160 | 7_1:-59647571 | Msa1027330:CDS |
| CCATAAAGAGGATGTGTCTG+AGG | 0.623419 | 7_1:-59651332 | Msa1027330:intron |
| TGGTAGTTAATTGCCGTTAG+GGG | 0.624621 | 7_1:+59646988 | None:intergenic |
| AAATTTACTAGAATTATCAA+GGG | 0.625338 | 7_1:-59646731 | Msa1027330:three_prime_UTR |
| ATTCCTGTGCTTGGATGTCG+GGG | 0.629527 | 7_1:-59647519 | Msa1027330:CDS |
| AAATGTTGAGCATCTTGAGA+TGG | 0.630523 | 7_1:-59647860 | Msa1027330:CDS |
| GCGTCCCGGCGAAACGACGG+TGG | 0.638563 | 7_1:-59652742 | Msa1027330:CDS |
| CCTATTGTTAAATATAGCTG+TGG | 0.642291 | 7_1:-59647163 | Msa1027330:intron |
| CAATTAACTACCATTCGGGG+AGG | 0.645683 | 7_1:-59646978 | Msa1027330:three_prime_UTR |
| AACTGTTGTGGAGACCGAGA+AGG | 0.646476 | 7_1:+59652657 | None:intergenic |
| AAAGTTCATAATCCTAAACA+TGG | 0.649384 | 7_1:-59649409 | Msa1027330:CDS |
| CAGAAGTGTGAAAACTGTTG+TGG | 0.649636 | 7_1:+59652645 | None:intergenic |
| AGACCGAGAAGGAAGACGAG+AGG | 0.652406 | 7_1:+59652668 | None:intergenic |
| ACATAATTGACCTAGTGAGG+TGG | 0.653949 | 7_1:-59647492 | Msa1027330:CDS |
| TCTGAAGACCAGGCTATGTG+GGG | 0.664423 | 7_1:+59646762 | None:intergenic |
| CATACGGTAGTTACTGTCTG+TGG | 0.666063 | 7_1:-59649318 | Msa1027330:CDS |
| AAAGCGACGATGAAGAGCGG+TGG | 0.672388 | 7_1:-59652791 | Msa1027330:exon |
| TCCCTTTGGAACCTAGACAT+GGG | 0.674373 | 7_1:-59647628 | Msa1027330:CDS |
| AAGAAAGCGACGATGAAGAG+CGG | 0.681471 | 7_1:-59652794 | Msa1027330:exon |
| GGCCATCCCATATTGGACCG+GGG | 0.682435 | 7_1:+59646783 | None:intergenic |
| CGGCAATTAACTACCATTCG+GGG | 0.689276 | 7_1:-59646981 | Msa1027330:three_prime_UTR |
| CAGAGCTAAATCAGTCCCCG+TGG | 0.710189 | 7_1:-59648379 | Msa1027330:intron |
| AAACTAACTTCCTCACTCAG+CGG | 0.730121 | 7_1:-59652999 | Msa1027330:five_prime_UTR |
| GGGTTGAGACCAAATCAGAG+AGG | 0.752411 | 7_1:-59648419 | Msa1027330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGTATTTATGTATTTTTT+TGG | - | chr7_1:59647552-59647571 | Msa1027330:CDS | 10.0% |
| !! | AAAAAATAAGACATTATTTA+AGG | + | chr7_1:59648583-59648602 | None:intergenic | 10.0% |
| !! | AACAAAAATATCTTAAAATT+TGG | - | chr7_1:59648925-59648944 | Msa1027330:intron | 10.0% |
| !! | ACAAAAATATCTTAAAATTT+GGG | - | chr7_1:59648926-59648945 | Msa1027330:intron | 10.0% |
| !!! | AAAATTTAAAACAGAAAAAA+AGG | + | chr7_1:59649651-59649670 | None:intergenic | 10.0% |
| !!! | ATTTTTTTATTTTTTTTGGT+GGG | - | chr7_1:59649857-59649876 | Msa1027330:CDS | 10.0% |
| !!! | GTTTTTATTTTTTGTTTGAT+TGG | + | chr7_1:59646677-59646696 | None:intergenic | 15.0% |
| !! | AAAAAAAACTCAATTAACAT+TGG | + | chr7_1:59647065-59647084 | None:intergenic | 15.0% |
| !!! | TTCTCTTTTTAATTTAATTC+AGG | - | chr7_1:59647173-59647192 | Msa1027330:intron | 15.0% |
| !!! | GCAGATTTTTTTATTTTTTT+TGG | - | chr7_1:59649853-59649872 | Msa1027330:CDS | 15.0% |
| !!! | GATTTTTTTATTTTTTTTGG+TGG | - | chr7_1:59649856-59649875 | Msa1027330:CDS | 15.0% |
| !! | AAACTAATTAAACTACATTA+AGG | + | chr7_1:59650704-59650723 | None:intergenic | 15.0% |
| !!! | TATTTAACTTCTATTTACTT+GGG | - | chr7_1:59650780-59650799 | Msa1027330:intron | 15.0% |
| !!! | TATTATTTTAGAACCATTTA+TGG | - | chr7_1:59650805-59650824 | Msa1027330:intron | 15.0% |
| !! | AGTTTACAAAAAAATTTACA+AGG | - | chr7_1:59651112-59651131 | Msa1027330:intron | 15.0% |
| !! | TATTAGAGAAAATAACATAA+TGG | + | chr7_1:59651440-59651459 | None:intergenic | 15.0% |
| !! | AAGTGAAATTATTAAAATAG+TGG | + | chr7_1:59651566-59651585 | None:intergenic | 15.0% |
| !!! | ATTTTGGAAAATACTATTAT+TGG | - | chr7_1:59652185-59652204 | Msa1027330:intron | 15.0% |
| !! | TAAATTTACTAGAATTATCA+AGG | - | chr7_1:59652841-59652860 | Msa1027330:five_prime_UTR | 15.0% |
| !! | AAATTTACTAGAATTATCAA+GGG | - | chr7_1:59652842-59652861 | Msa1027330:five_prime_UTR | 15.0% |
| !! | CGCTAAAATGAAAATTTATA+TGG | + | chr7_1:59647035-59647054 | None:intergenic | 20.0% |
| !!! | TCTGCTAACTTTATTTATTT+AGG | - | chr7_1:59647843-59647862 | Msa1027330:CDS | 20.0% |
| !! | TATTCTTAAAGCATAGAAAA+TGG | - | chr7_1:59648454-59648473 | Msa1027330:intron | 20.0% |
| !! | ATTCTTAAAGCATAGAAAAT+GGG | - | chr7_1:59648455-59648474 | Msa1027330:intron | 20.0% |
| !!! | AAACAATTAATCCTTTTACT+AGG | - | chr7_1:59648479-59648498 | Msa1027330:intron | 20.0% |
| !!! | TTGTAAATTGCATAGTTTTT+TGG | - | chr7_1:59648892-59648911 | Msa1027330:intron | 20.0% |
| !!! | TTACTTTGAAATACTTTCTA+CGG | + | chr7_1:59649279-59649298 | None:intergenic | 20.0% |
| !!! | AATTTGTAAGATTTAAAACC+TGG | + | chr7_1:59649393-59649412 | None:intergenic | 20.0% |
| !! | ATATATACCATTAATCTTAG+AGG | - | chr7_1:59649830-59649849 | Msa1027330:intron | 20.0% |
| !! | TATATACCATTAATCTTAGA+GGG | - | chr7_1:59649831-59649850 | Msa1027330:intron | 20.0% |
| !! | GAATAAGTACTAACATAAAA+AGG | - | chr7_1:59649941-59649960 | Msa1027330:intron | 20.0% |
| !! | GAAGCTAATAAAAATAATAC+AGG | + | chr7_1:59650750-59650769 | None:intergenic | 20.0% |
| !!! | GTATTTAACTTCTATTTACT+TGG | - | chr7_1:59650779-59650798 | Msa1027330:intron | 20.0% |
| !! | GATGTAATAAAAACATTCAT+GGG | + | chr7_1:59651043-59651062 | None:intergenic | 20.0% |
| !! | AGATGTAATAAAAACATTCA+TGG | + | chr7_1:59651044-59651063 | None:intergenic | 20.0% |
| !! | GTATTCAAAATCACTTTATA+GGG | - | chr7_1:59651134-59651153 | Msa1027330:intron | 20.0% |
| !! | TCAGAACATTAAGTTTATAT+AGG | + | chr7_1:59651305-59651324 | None:intergenic | 20.0% |
| !!! | ATCTTCAAATTTTTCTGAAT+CGG | + | chr7_1:59651406-59651425 | None:intergenic | 20.0% |
| !!! | TTATAAAAGGTTGATAAAAG+AGG | - | chr7_1:59652127-59652146 | Msa1027330:intron | 20.0% |
| !!! | GGTTAAATCACTTTTTAAAT+CGG | + | chr7_1:59652638-59652657 | None:intergenic | 20.0% |
| !!! | GTTTTCATTCGTAATTAAAA+AGG | - | chr7_1:59652889-59652908 | Msa1027330:five_prime_UTR | 20.0% |
| ! | ATGTGATGAAAATGAAGAAT+TGG | + | chr7_1:59646994-59647013 | None:intergenic | 25.0% |
| ! | TTTGTACGTTTGTTCAATTA+TGG | - | chr7_1:59647211-59647230 | Msa1027330:intron | 25.0% |
| !!! | ATTTTTTTGGTGTTAACCTT+TGG | - | chr7_1:59647565-59647584 | Msa1027330:CDS | 25.0% |
| !!! | TTTTTTTGGTGTTAACCTTT+GGG | - | chr7_1:59647566-59647585 | Msa1027330:CDS | 25.0% |
| !!! | AAAAGTACTATTTGTAACGA+TGG | - | chr7_1:59647866-59647885 | Msa1027330:CDS | 25.0% |
| ! | TGCATAAACATAACAACAAA+TGG | + | chr7_1:59648028-59648047 | None:intergenic | 25.0% |
| !!! | ATTTGTTGTTATGTTTATGC+AGG | - | chr7_1:59648027-59648046 | Msa1027330:intron | 25.0% |
| !!! | ATAACATTTTGACTCTGATT+TGG | + | chr7_1:59648197-59648216 | None:intergenic | 25.0% |
| !! | AGGCTTATTTAAAATAGCTT+GGG | + | chr7_1:59648281-59648300 | None:intergenic | 25.0% |
| !! | AAGGCTTATTTAAAATAGCT+TGG | + | chr7_1:59648282-59648301 | None:intergenic | 25.0% |
| ! | TATACTGATAACCTAGTAAA+AGG | + | chr7_1:59648493-59648512 | None:intergenic | 25.0% |
| ! | TAAAGTTCAAACAAAACACA+TGG | - | chr7_1:59648511-59648530 | Msa1027330:intron | 25.0% |
| ! | GTGTATGAAACATTCAAAAA+CGG | - | chr7_1:59648537-59648556 | Msa1027330:intron | 25.0% |
| !! | TAAGACATTATTTAAGGCTT+TGG | + | chr7_1:59648577-59648596 | None:intergenic | 25.0% |
| !! | TTTTTGTAAATTTCTTCCAC+AGG | - | chr7_1:59648598-59648617 | Msa1027330:intron | 25.0% |
| !! | TTTTGTAAATTTCTTCCACA+GGG | - | chr7_1:59648599-59648618 | Msa1027330:intron | 25.0% |
| !! | AACTTTGAGAATTGACATTT+GGG | + | chr7_1:59649057-59649076 | None:intergenic | 25.0% |
| !! | AAACTTTGAGAATTGACATT+TGG | + | chr7_1:59649058-59649077 | None:intergenic | 25.0% |
| !!! | AATATCTGTCTCTTTGTTTT+TGG | - | chr7_1:59649234-59649253 | Msa1027330:CDS | 25.0% |
| !!! | TACTTTGAAATACTTTCTAC+GGG | + | chr7_1:59649278-59649297 | None:intergenic | 25.0% |
| !! | TTGAGGATTTTCATCAATAA+TGG | + | chr7_1:59649309-59649328 | None:intergenic | 25.0% |
| !! | CCAATTTTTGCAATATAAAG+AGG | + | chr7_1:59649356-59649375 | None:intergenic | 25.0% |
| ! | CCTCTTTATATTGCAAAAAT+TGG | - | chr7_1:59649353-59649372 | Msa1027330:CDS | 25.0% |
| !! | CAATAATAATTTTGCATGTC+AGG | - | chr7_1:59649501-59649520 | Msa1027330:intron | 25.0% |
| !!! | GTTCTGAAGAATTATTCTAA+AGG | - | chr7_1:59649526-59649545 | Msa1027330:intron | 25.0% |
| !!! | TGATTTTCAAGAAGGTATTA+GGG | + | chr7_1:59649625-59649644 | None:intergenic | 25.0% |
| !!! | ATGATTTTCAAGAAGGTATT+AGG | + | chr7_1:59649626-59649645 | None:intergenic | 25.0% |
| !!! | AAAGGAAATGATTTTCAAGA+AGG | + | chr7_1:59649633-59649652 | None:intergenic | 25.0% |
| !!! | TAATTAATTTTCAGGTGTCA+AGG | - | chr7_1:59649670-59649689 | Msa1027330:intron | 25.0% |
| ! | TATATTCGTACATTAGAAGT+TGG | + | chr7_1:59649737-59649756 | None:intergenic | 25.0% |
| ! | AGCAATTATGTGTTCAATAA+AGG | + | chr7_1:59649767-59649786 | None:intergenic | 25.0% |
| ! | AATGTTATAGGAGATTATAC+TGG | + | chr7_1:59649914-59649933 | None:intergenic | 25.0% |
| !! | TGTTTAGGATTATGAACTTT+AGG | + | chr7_1:59650164-59650183 | None:intergenic | 25.0% |
| ! | AAAGTTCATAATCCTAAACA+TGG | - | chr7_1:59650164-59650183 | Msa1027330:intron | 25.0% |
| ! | GGTATTCAAAATCACTTTAT+AGG | - | chr7_1:59651133-59651152 | Msa1027330:intron | 25.0% |
| ! | ATTATTATGCAATGAAGCTT+TGG | - | chr7_1:59651649-59651668 | Msa1027330:intron | 25.0% |
| !! | GTTGTAATGAATTGTCTTTT+AGG | + | chr7_1:59651743-59651762 | None:intergenic | 25.0% |
| !!! | TTCAATTTGCTGAATATATC+AGG | + | chr7_1:59651876-59651895 | None:intergenic | 25.0% |
| ! | GTCTTACTCAAACTTATAAA+AGG | - | chr7_1:59652114-59652133 | Msa1027330:intron | 25.0% |
| ! | TACTGGAAGTAATATTGTTA+AGG | - | chr7_1:59652217-59652236 | Msa1027330:intron | 25.0% |
| ! | ACTGGAAGTAATATTGTTAA+GGG | - | chr7_1:59652218-59652237 | Msa1027330:intron | 25.0% |
| ! | CACAGCTATATTTAACAATA+GGG | + | chr7_1:59652412-59652431 | None:intergenic | 25.0% |
| !! | AAAACTGAAATTTTCTCCTT+AGG | - | chr7_1:59652519-59652538 | Msa1027330:intron | 25.0% |
| !! | AAGTGATTTAACCGATTTAA+AGG | - | chr7_1:59652645-59652664 | Msa1027330:CDS | 25.0% |
| !! | CATCACTTTGAAGAAAAAAA+AGG | - | chr7_1:59653004-59653023 | Msa1027330:five_prime_UTR | 25.0% |
| TCGACAACAATAGTGATTTA+AGG | - | chr7_1:59647411-59647430 | Msa1027330:exon | 30.0% | |
| TTGAATGTAATCACATGTGT+CGG | - | chr7_1:59647444-59647463 | Msa1027330:CDS | 30.0% | |
| AAAGAAATTCAACTCAGAGA+TGG | + | chr7_1:59647807-59647826 | None:intergenic | 30.0% | |
| CATTTGAATTGAATGCTTAC+CGG | + | chr7_1:59648081-59648100 | None:intergenic | 30.0% | |
| ! | ATTATTTAAGGCTTTGGTAG+GGG | + | chr7_1:59648571-59648590 | None:intergenic | 30.0% |
| ! | CATTATTTAAGGCTTTGGTA+GGG | + | chr7_1:59648572-59648591 | None:intergenic | 30.0% |
| ! | ACATTATTTAAGGCTTTGGT+AGG | + | chr7_1:59648573-59648592 | None:intergenic | 30.0% |
| AGATAAATCAAGTCATGTGA+AGG | - | chr7_1:59648622-59648641 | Msa1027330:intron | 30.0% | |
| CTGTAATTGTCATCATTGTA+AGG | - | chr7_1:59648834-59648853 | Msa1027330:intron | 30.0% | |
| ! | TGTCATCATTGTAAGGTTTT+TGG | - | chr7_1:59648841-59648860 | Msa1027330:intron | 30.0% |
| ! | GTCATCATTGTAAGGTTTTT+GGG | - | chr7_1:59648842-59648861 | Msa1027330:intron | 30.0% |
| ACTATGCAATTTACAAAGCT+GGG | + | chr7_1:59648888-59648907 | None:intergenic | 30.0% | |
| AACTATGCAATTTACAAAGC+TGG | + | chr7_1:59648889-59648908 | None:intergenic | 30.0% | |
| TTGGGCAAAATAAAGATAAC+CGG | - | chr7_1:59648944-59648963 | Msa1027330:intron | 30.0% | |
| ! | GTTTCTTTCTTTTTCTGTTC+TGG | + | chr7_1:59648984-59649003 | None:intergenic | 30.0% |
| AAAGAAACATAAGAGAACAG+TGG | - | chr7_1:59648996-59649015 | Msa1027330:intron | 30.0% | |
| ! | TTCTCAAAGTTTGTTCGAAA+CGG | - | chr7_1:59649066-59649085 | Msa1027330:intron | 30.0% |
| ! | TATTCTAAAGGAGACAAGAA+TGG | - | chr7_1:59649538-59649557 | Msa1027330:intron | 30.0% |
| ACCAATGAAGAAAAACATAG+AGG | - | chr7_1:59649571-59649590 | Msa1027330:intron | 30.0% | |
| ! | ACCTCTATGTTTTTCTTCAT+TGG | + | chr7_1:59649575-59649594 | None:intergenic | 30.0% |
| TGGTGGGATAATAATTTAGT+AGG | - | chr7_1:59649873-59649892 | Msa1027330:CDS | 30.0% | |
| TATTCTGCTGTGAATGTTAT+AGG | + | chr7_1:59649926-59649945 | None:intergenic | 30.0% | |
| GCTCCATTCAAATAGTTAAT+CGG | - | chr7_1:59649974-59649993 | Msa1027330:intron | 30.0% | |
| CTCCATTCAAATAGTTAATC+GGG | - | chr7_1:59649975-59649994 | Msa1027330:intron | 30.0% | |
| !! | AAATAACCTTTAAAGTCTGC+TGG | + | chr7_1:59650087-59650106 | None:intergenic | 30.0% |
| !!! | CTTGTATACTCTGTTTTAGT+TGG | + | chr7_1:59650403-59650422 | None:intergenic | 30.0% |
| CAAATTATATCAGCTTACAG+TGG | + | chr7_1:59650473-59650492 | None:intergenic | 30.0% | |
| CTTTCTACTTGAGAAGTTAT+TGG | - | chr7_1:59650529-59650548 | Msa1027330:intron | 30.0% | |
| ATTGTGTATGGAACCATAAA+TGG | + | chr7_1:59650821-59650840 | None:intergenic | 30.0% | |
| !!! | TGGTTCCATACACAATTTTT+TGG | - | chr7_1:59650825-59650844 | Msa1027330:intron | 30.0% |
| !!! | GGTTCCATACACAATTTTTT+GGG | - | chr7_1:59650826-59650845 | Msa1027330:intron | 30.0% |
| TTAGCCCAAAAAATTGTGTA+TGG | + | chr7_1:59650833-59650852 | None:intergenic | 30.0% | |
| !!! | ACACAATTTTTTGGGCTAAT+AGG | - | chr7_1:59650834-59650853 | Msa1027330:intron | 30.0% |
| AAAGTTGAGATGAGAAAGAA+AGG | + | chr7_1:59650883-59650902 | None:intergenic | 30.0% | |
| ATCTCAACTTTGTTCTATCT+CGG | - | chr7_1:59650892-59650911 | Msa1027330:intron | 30.0% | |
| ! | TTTGAGGTTAATCAACAGAA+AGG | + | chr7_1:59650930-59650949 | None:intergenic | 30.0% |
| ACAATTATATGATCTGACTG+AGG | - | chr7_1:59651245-59651264 | Msa1027330:intron | 30.0% | |
| ATCATCACATTATGAAGAAG+AGG | - | chr7_1:59651380-59651399 | Msa1027330:intron | 30.0% | |
| AGTTATGATAATCCATCCAT+GGG | - | chr7_1:59651798-59651817 | Msa1027330:intron | 30.0% | |
| ! | AAATGTATTCCGTTCTAAAC+TGG | + | chr7_1:59651824-59651843 | None:intergenic | 30.0% |
| ! | ATTGAAGAAAGTTGTTGTTC+TGG | - | chr7_1:59651890-59651909 | Msa1027330:intron | 30.0% |
| GGTCAATTGAAAGGTTATTT+AGG | - | chr7_1:59652011-59652030 | Msa1027330:intron | 30.0% | |
| AAAGGTTATTTAGGTGAGAA+AGG | - | chr7_1:59652020-59652039 | Msa1027330:intron | 30.0% | |
| ATTATCATAACGCAGATCTA+GGG | + | chr7_1:59652167-59652186 | None:intergenic | 30.0% | |
| AATTATCATAACGCAGATCT+AGG | + | chr7_1:59652168-59652187 | None:intergenic | 30.0% | |
| ! | GATCTGCGTTATGATAATTT+TGG | - | chr7_1:59652169-59652188 | Msa1027330:intron | 30.0% |
| ATTATTGGATATAGCAGTAC+TGG | - | chr7_1:59652200-59652219 | Msa1027330:intron | 30.0% | |
| TTGTTAAGGGAAATGTTAAC+CGG | - | chr7_1:59652231-59652250 | Msa1027330:intron | 30.0% | |
| CCACAGCTATATTTAACAAT+AGG | + | chr7_1:59652413-59652432 | None:intergenic | 30.0% | |
| CCTATTGTTAAATATAGCTG+TGG | - | chr7_1:59652410-59652429 | Msa1027330:intron | 30.0% | |
| ! | CCTAGTACATTCATTTTGTT+GGG | + | chr7_1:59652487-59652506 | None:intergenic | 30.0% |
| !! | TTTTAAGAGGATTGCTCTTT+AGG | + | chr7_1:59652765-59652784 | None:intergenic | 30.0% |
| ! | CACTTTGAAGAAAAAAAAGG+TGG | - | chr7_1:59653007-59653026 | Msa1027330:five_prime_UTR | 30.0% |
| !! | TAGAAGCATTGACACGTATA+CGG | - | chr7_1:59647365-59647384 | Msa1027330:three_prime_UTR | 35.0% |
| ! | GTTTTGTAGCATGAACACTT+CGG | + | chr7_1:59647513-59647532 | None:intergenic | 35.0% |
| ATTCATAGGTGGAACATTCT+TGG | + | chr7_1:59647648-59647667 | None:intergenic | 35.0% | |
| AGAACTTGAGTTCGATTCAT+AGG | + | chr7_1:59647662-59647681 | None:intergenic | 35.0% | |
| ! | AATTTTGCACGAAACTTGCA+TGG | - | chr7_1:59647889-59647908 | Msa1027330:CDS | 35.0% |
| AAATGACACAAGAGAAAGTG+AGG | + | chr7_1:59648173-59648192 | None:intergenic | 35.0% | |
| CGAACATCATGTCTATTGTA+TGG | + | chr7_1:59648221-59648240 | None:intergenic | 35.0% | |
| AGAATGCTAGAAGAAAAGGA+AGG | + | chr7_1:59648301-59648320 | None:intergenic | 35.0% | |
| CAGAAGAATGCTAGAAGAAA+AGG | + | chr7_1:59648305-59648324 | None:intergenic | 35.0% | |
| TTTCTTCTAGCATTCTTCTG+CGG | - | chr7_1:59648305-59648324 | Msa1027330:intron | 35.0% | |
| TGACTACAACTAAAACAGTG+AGG | + | chr7_1:59648349-59648368 | None:intergenic | 35.0% | |
| TTAGCATGCACAAACATTGA+TGG | - | chr7_1:59648430-59648449 | Msa1027330:intron | 35.0% | |
| TAGCATGCACAAACATTGAT+GGG | - | chr7_1:59648431-59648450 | Msa1027330:intron | 35.0% | |
| GTTCAAACAAAACACATGGT+TGG | - | chr7_1:59648515-59648534 | Msa1027330:intron | 35.0% | |
| AGTATTATGCAGAGAACCTT+GGG | + | chr7_1:59648677-59648696 | None:intergenic | 35.0% | |
| TTCTTGCCTAACATAATCGA+AGG | - | chr7_1:59648787-59648806 | Msa1027330:intron | 35.0% | |
| TCTTGCCTAACATAATCGAA+GGG | - | chr7_1:59648788-59648807 | Msa1027330:intron | 35.0% | |
| ! | GTTTTCCCTTCGATTATGTT+AGG | + | chr7_1:59648796-59648815 | None:intergenic | 35.0% |
| TTTACAAAGCTGGGATCTTA+AGG | + | chr7_1:59648879-59648898 | None:intergenic | 35.0% | |
| ! | TCTTTCTTTTTCTGTTCTGG+AGG | + | chr7_1:59648981-59649000 | None:intergenic | 35.0% |
| TTGAGAATTGACATTTGGGA+AGG | + | chr7_1:59649053-59649072 | None:intergenic | 35.0% | |
| ! | AGCGTTTGGTTAGTTAAGAT+AGG | + | chr7_1:59649175-59649194 | None:intergenic | 35.0% |
| TGAAATACTTTCTACGGGTT+AGG | + | chr7_1:59649273-59649292 | None:intergenic | 35.0% | |
| GACGTGGAACAATTTATTTG+AGG | + | chr7_1:59649326-59649345 | None:intergenic | 35.0% | |
| TAAATTGTTCCACGTCAAAG+TGG | - | chr7_1:59649330-59649349 | Msa1027330:CDS | 35.0% | |
| !! | CAACTTGTTAATCTGGAACA+AGG | + | chr7_1:59649416-59649435 | None:intergenic | 35.0% |
| TGTTCCAGATTAACAAGTTG+TGG | - | chr7_1:59649416-59649435 | Msa1027330:CDS | 35.0% | |
| GTTCCAGATTAACAAGTTGT+GGG | - | chr7_1:59649417-59649436 | Msa1027330:CDS | 35.0% | |
| !! | AATCCCACAACTTGTTAATC+TGG | + | chr7_1:59649423-59649442 | None:intergenic | 35.0% |
| AGATTAACAAGTTGTGGGAT+TGG | - | chr7_1:59649422-59649441 | Msa1027330:intron | 35.0% | |
| GATTAACAAGTTGTGGGATT+GGG | - | chr7_1:59649423-59649442 | Msa1027330:intron | 35.0% | |
| ATTAACAAGTTGTGGGATTG+GGG | - | chr7_1:59649424-59649443 | Msa1027330:intron | 35.0% | |
| GGTGTAAATGCATCTTCTAT+GGG | - | chr7_1:59649445-59649464 | Msa1027330:intron | 35.0% | |
| TAGGGCATACGATATTGAAT+CGG | + | chr7_1:59649607-59649626 | None:intergenic | 35.0% | |
| ATTCGTACATTAGAAGTTGG+AGG | + | chr7_1:59649734-59649753 | None:intergenic | 35.0% | |
| !! | AATCTGCCCTCTAAGATTAA+TGG | + | chr7_1:59649840-59649859 | None:intergenic | 35.0% |
| GACCCGATTAACTATTTGAA+TGG | + | chr7_1:59649980-59649999 | None:intergenic | 35.0% | |
| TACTATCCAGCAGACTTTAA+AGG | - | chr7_1:59650078-59650097 | Msa1027330:intron | 35.0% | |
| GTCTTTCAACTTCTTAACCA+TGG | + | chr7_1:59650312-59650331 | None:intergenic | 35.0% | |
| GTTGAAAGACCAACTATTTG+TGG | - | chr7_1:59650322-59650341 | Msa1027330:intron | 35.0% | |
| AAAACAGAGTATACAAGAGC+TGG | - | chr7_1:59650406-59650425 | Msa1027330:intron | 35.0% | |
| ATTATATCAGCTTACAGTGG+TGG | + | chr7_1:59650470-59650489 | None:intergenic | 35.0% | |
| !! | TTCTTATTAGCTTGCAGATC+TGG | - | chr7_1:59650626-59650645 | Msa1027330:intron | 35.0% |
| !! | CAGGTCACTTTAGTTGTTTT+AGG | + | chr7_1:59650731-59650750 | None:intergenic | 35.0% |
| ATAGGTTATACTGCAAAGCA+TGG | - | chr7_1:59650852-59650871 | Msa1027330:intron | 35.0% | |
| TCTCAACTTTGTTCTATCTC+GGG | - | chr7_1:59650893-59650912 | Msa1027330:intron | 35.0% | |
| !! | AATCCTGAGCTTTTGATAGT+TGG | + | chr7_1:59651007-59651026 | None:intergenic | 35.0% |
| !!! | ATGAGAAAAGTGCTTTTGCA+CGG | + | chr7_1:59651080-59651099 | None:intergenic | 35.0% |
| TTCAACCTCTATGAATTCAC+TGG | + | chr7_1:59651537-59651556 | None:intergenic | 35.0% | |
| TTGTTGCTGCTCAATATTTC+AGG | - | chr7_1:59651584-59651603 | Msa1027330:intron | 35.0% | |
| ! | GCTCAATATTTCAGGTAAGT+CGG | - | chr7_1:59651592-59651611 | Msa1027330:intron | 35.0% |
| ! | GTTTTTCATGTGTTGTCTGA+TGG | - | chr7_1:59651621-59651640 | Msa1027330:intron | 35.0% |
| TGGTTCAAGAGGAACAATTA+TGG | - | chr7_1:59651669-59651688 | Msa1027330:intron | 35.0% | |
| GGTTCAAGAGGAACAATTAT+GGG | - | chr7_1:59651670-59651689 | Msa1027330:intron | 35.0% | |
| GTTCAAGAGGAACAATTATG+GGG | - | chr7_1:59651671-59651690 | Msa1027330:intron | 35.0% | |
| AAATGTTGAGCATCTTGAGA+TGG | - | chr7_1:59651713-59651732 | Msa1027330:intron | 35.0% | |
| AATGAAACACGAAACTCTTC+AGG | + | chr7_1:59651774-59651793 | None:intergenic | 35.0% | |
| CAGTTATGATAATCCATCCA+TGG | - | chr7_1:59651797-59651816 | Msa1027330:intron | 35.0% | |
| TGAACATAATTGACCTAGTG+AGG | - | chr7_1:59652078-59652097 | Msa1027330:intron | 35.0% | |
| !! | AGGTTGATAAAAGAGGTTAG+TGG | - | chr7_1:59652134-59652153 | Msa1027330:intron | 35.0% |
| TAGTAGTAGAGGAGTCAAAT+TGG | - | chr7_1:59652433-59652452 | Msa1027330:intron | 35.0% | |
| AGTAGTAGAGGAGTCAAATT+GGG | - | chr7_1:59652434-59652453 | Msa1027330:intron | 35.0% | |
| CCCAACAAAATGAATGTACT+AGG | - | chr7_1:59652484-59652503 | Msa1027330:intron | 35.0% | |
| ! | GCCTAGTACATTCATTTTGT+TGG | + | chr7_1:59652488-59652507 | None:intergenic | 35.0% |
| ATGGTAGTTAATTGCCGTTA+GGG | + | chr7_1:59652589-59652608 | None:intergenic | 35.0% | |
| AATGGTAGTTAATTGCCGTT+AGG | + | chr7_1:59652590-59652609 | None:intergenic | 35.0% | |
| AACGGCAATTAACTACCATT+CGG | - | chr7_1:59652590-59652609 | Msa1027330:intron | 35.0% | |
| !! | ATTCGGGGAGGTTTTTAATT+CGG | - | chr7_1:59652607-59652626 | Msa1027330:intron | 35.0% |
| AACGGTAGTTAATTGCCATT+CGG | + | chr7_1:59652674-59652693 | None:intergenic | 35.0% | |
| ! | GTGTTTAATTGCTGTTCAGT+AGG | - | chr7_1:59652706-59652725 | Msa1027330:CDS | 35.0% |
| ATCCTCTTAAAAAATTGCCC+CGG | - | chr7_1:59652773-59652792 | Msa1027330:CDS | 35.0% | |
| ! | TTAACTATTCTCTGAAGACC+AGG | + | chr7_1:59652824-59652843 | None:intergenic | 35.0% |
| ! | CTGAGTGAGGAAGTTAGTTT+GGG | + | chr7_1:59646574-59646593 | None:intergenic | 40.0% |
| AAACTAACTTCCTCACTCAG+CGG | - | chr7_1:59646574-59646593 | Msa1027330:three_prime_UTR | 40.0% | |
| ! | CAGAAGTGTGAAAACTGTTG+TGG | + | chr7_1:59646931-59646950 | None:intergenic | 40.0% |
| ! | CACAACAGTTTTCACACTTC+TGG | - | chr7_1:59646929-59646948 | Msa1027330:three_prime_UTR | 40.0% |
| TACTTACATCTTGGCCAAAC+TGG | + | chr7_1:59647618-59647637 | None:intergenic | 40.0% | |
| GGTCAGACTTACTTACATCT+TGG | + | chr7_1:59647627-59647646 | None:intergenic | 40.0% | |
| ACTTGAGTTCGATTCATAGG+TGG | + | chr7_1:59647659-59647678 | None:intergenic | 40.0% | |
| TCTCCTGAACAAACGTTCTT+TGG | - | chr7_1:59647679-59647698 | Msa1027330:CDS | 40.0% | |
| CACGAAACTTGCATGGATTT+AGG | - | chr7_1:59647896-59647915 | Msa1027330:CDS | 40.0% | |
| ! | GCATGGATTTAGGCATTGTT+TGG | - | chr7_1:59647906-59647925 | Msa1027330:CDS | 40.0% |
| TGAACAGAGAAATACTCCTC+CGG | - | chr7_1:59648059-59648078 | Msa1027330:intron | 40.0% | |
| TTGAATTGAATGCTTACCGG+AGG | + | chr7_1:59648078-59648097 | None:intergenic | 40.0% | |
| ACATGATGTTCGCCATAAAG+AGG | - | chr7_1:59648229-59648248 | Msa1027330:intron | 40.0% | |
| TTCTTCTAGCATTCTTCTGC+GGG | - | chr7_1:59648306-59648325 | Msa1027330:intron | 40.0% | |
| TGACTTGATTTATCTCCCTG+TGG | + | chr7_1:59648617-59648636 | None:intergenic | 40.0% | |
| GAGTATTATGCAGAGAACCT+TGG | + | chr7_1:59648678-59648697 | None:intergenic | 40.0% | |
| AGGTTCTCTGCATAATACTC+TGG | - | chr7_1:59648678-59648697 | Msa1027330:intron | 40.0% | |
| TTCTCTGCATAATACTCTGG+TGG | - | chr7_1:59648681-59648700 | Msa1027330:intron | 40.0% | |
| TACCTCTCAAGTCTCAACTA+GGG | + | chr7_1:59649142-59649161 | None:intergenic | 40.0% | |
| ATACCTCTCAAGTCTCAACT+AGG | + | chr7_1:59649143-59649162 | None:intergenic | 40.0% | |
| !! | TTGAGACTTGAGAGGTATCA+AGG | - | chr7_1:59649145-59649164 | Msa1027330:CDS | 40.0% |
| CATAAACTGCACATTGCCAA+TGG | - | chr7_1:59649206-59649225 | Msa1027330:CDS | 40.0% | |
| ! | AGACAGATATTTTGCGCCAT+TGG | + | chr7_1:59649225-59649244 | None:intergenic | 40.0% |
| !! | TTTCTACGGGTTAGGAACAA+AGG | + | chr7_1:59649265-59649284 | None:intergenic | 40.0% |
| GGGTGTAAATGCATCTTCTA+TGG | - | chr7_1:59649444-59649463 | Msa1027330:intron | 40.0% | |
| ! | ATCTTCTATGGGTTGTGTTG+TGG | - | chr7_1:59649456-59649475 | Msa1027330:intron | 40.0% |
| CAAATAGTTAATCGGGTCGT+AGG | - | chr7_1:59649982-59650001 | Msa1027330:intron | 40.0% | |
| GAGAGACTGTGAGTTTGATT+TGG | + | chr7_1:59650029-59650048 | None:intergenic | 40.0% | |
| CATCAGCAGAACTTGTCTTA+GGG | + | chr7_1:59650211-59650230 | None:intergenic | 40.0% | |
| TCATCAGCAGAACTTGTCTT+AGG | + | chr7_1:59650212-59650231 | None:intergenic | 40.0% | |
| ACAAGTTCTGCTGATGAAAC+TGG | - | chr7_1:59650215-59650234 | Msa1027330:intron | 40.0% | |
| AGAAGTTATGAAAGACGCCA+TGG | - | chr7_1:59650292-59650311 | Msa1027330:intron | 40.0% | |
| ! | AAGCTCTAGCCACAAATAGT+TGG | + | chr7_1:59650334-59650353 | None:intergenic | 40.0% |
| AACTGAAACATCTAAGCTGG+GGG | + | chr7_1:59650508-59650527 | None:intergenic | 40.0% | |
| CAACTGAAACATCTAAGCTG+GGG | + | chr7_1:59650509-59650528 | None:intergenic | 40.0% | |
| GCAACTGAAACATCTAAGCT+GGG | + | chr7_1:59650510-59650529 | None:intergenic | 40.0% | |
| AGCAACTGAAACATCTAAGC+TGG | + | chr7_1:59650511-59650530 | None:intergenic | 40.0% | |
| CTCAACTTTGTTCTATCTCG+GGG | - | chr7_1:59650894-59650913 | Msa1027330:intron | 40.0% | |
| AGTCAAGGTTCACAGAACAA+CGG | + | chr7_1:59650960-59650979 | None:intergenic | 40.0% | |
| TTCTGTGAACCTTGACTTTC+AGG | - | chr7_1:59650963-59650982 | Msa1027330:intron | 40.0% | |
| GAACCAACTATCAAAAGCTC+AGG | - | chr7_1:59651001-59651020 | Msa1027330:intron | 40.0% | |
| !!! | TGAGAAAAGTGCTTTTGCAC+GGG | + | chr7_1:59651079-59651098 | None:intergenic | 40.0% |
| AACATCCATCCTCTCTGATT+TGG | + | chr7_1:59651166-59651185 | None:intergenic | 40.0% | |
| ATCAACATTGTCGCAAACCA+CGG | + | chr7_1:59651214-59651233 | None:intergenic | 40.0% | |
| ATGCACCAGTGAATTCATAG+AGG | - | chr7_1:59651529-59651548 | Msa1027330:intron | 40.0% | |
| ! | ATTTCAGGTAAGTCGGAATC+AGG | - | chr7_1:59651599-59651618 | Msa1027330:intron | 40.0% |
| ! | CAATGAAGCTTTGGTTCAAG+AGG | - | chr7_1:59651658-59651677 | Msa1027330:intron | 40.0% |
| !! | TGACTTTTTCTCCCATGTCT+AGG | + | chr7_1:59651959-59651978 | None:intergenic | 40.0% |
| GACATGGGAGAAAAAGTCAA+TGG | - | chr7_1:59651960-59651979 | Msa1027330:intron | 40.0% | |
| GTAAGGCTAGGTCAATTGAA+AGG | - | chr7_1:59652002-59652021 | Msa1027330:intron | 40.0% | |
| TCAACCATAATTCCTGTGCT+TGG | - | chr7_1:59652045-59652064 | Msa1027330:intron | 40.0% | |
| ACATCCAAGCACAGGAATTA+TGG | + | chr7_1:59652052-59652071 | None:intergenic | 40.0% | |
| TAATTCCTGTGCTTGGATGT+CGG | - | chr7_1:59652052-59652071 | Msa1027330:intron | 40.0% | |
| ACATAATTGACCTAGTGAGG+TGG | - | chr7_1:59652081-59652100 | Msa1027330:intron | 40.0% | |
| TATAGCTGTGGTAGTAGTAG+AGG | - | chr7_1:59652422-59652441 | Msa1027330:intron | 40.0% | |
| ! | TTTAGGGTAATTTGAGGTGC+TGG | + | chr7_1:59652562-59652581 | None:intergenic | 40.0% |
| ! | GGGGTATTTAGGGTAATTTG+AGG | + | chr7_1:59652568-59652587 | None:intergenic | 40.0% |
| TTACCCTAAATACCCCCTAA+CGG | - | chr7_1:59652572-59652591 | Msa1027330:intron | 40.0% | |
| TGGTAGTTAATTGCCGTTAG+GGG | + | chr7_1:59652588-59652607 | None:intergenic | 40.0% | |
| ACGGCAATTAACTACCATTC+GGG | - | chr7_1:59652591-59652610 | Msa1027330:intron | 40.0% | |
| GAATTAAAAACCTCCCCGAA+TGG | + | chr7_1:59652608-59652627 | None:intergenic | 40.0% | |
| CCATTCGGCATCCTTTAAAT+CGG | + | chr7_1:59652659-59652678 | None:intergenic | 40.0% | |
| GCTGAGTGAGGAAGTTAGTT+TGG | + | chr7_1:59646575-59646594 | None:intergenic | 45.0% | |
| AATCAATCAACCGCTGAGTG+AGG | + | chr7_1:59646587-59646606 | None:intergenic | 45.0% | |
| AAGAAAGCGACGATGAAGAG+CGG | - | chr7_1:59646779-59646798 | Msa1027330:three_prime_UTR | 45.0% | |
| GGTCTCATCATTGCAGTTCT+CGG | - | chr7_1:59646857-59646876 | Msa1027330:three_prime_UTR | 45.0% | |
| ATTGACACGTATACGGACAC+CGG | - | chr7_1:59647372-59647391 | Msa1027330:three_prime_UTR | 45.0% | |
| CGACGTGTTAATGTCATGTC+CGG | + | chr7_1:59647394-59647413 | None:intergenic | 45.0% | |
| TGTCAGACATGGACACATGT+TGG | - | chr7_1:59647467-59647486 | Msa1027330:CDS | 45.0% | |
| ! | GGTGTTAACCTTTGGGTTTC+CGG | - | chr7_1:59647573-59647592 | Msa1027330:CDS | 45.0% |
| ! | GTGTTAACCTTTGGGTTTCC+GGG | - | chr7_1:59647574-59647593 | Msa1027330:CDS | 45.0% |
| ! | TGTTAACCTTTGGGTTTCCG+GGG | - | chr7_1:59647575-59647594 | Msa1027330:CDS | 45.0% |
| TTGGCCAAACTGGATTACCA+GGG | + | chr7_1:59647608-59647627 | None:intergenic | 45.0% | |
| CCACCAAAGAACGTTTGTTC+AGG | + | chr7_1:59647685-59647704 | None:intergenic | 45.0% | |
| CCTGAACAAACGTTCTTTGG+TGG | - | chr7_1:59647682-59647701 | Msa1027330:CDS | 45.0% | |
| GTGGAGCTCATAATCCACTT+GGG | - | chr7_1:59647701-59647720 | Msa1027330:CDS | 45.0% | |
| CCTCAGACACATCCTCTTTA+TGG | + | chr7_1:59648244-59648263 | None:intergenic | 45.0% | |
| CCATAAAGAGGATGTGTCTG+AGG | - | chr7_1:59648241-59648260 | Msa1027330:intron | 45.0% | |
| ! | AAGAGGATGTGTCTGAGGTA+CGG | - | chr7_1:59648246-59648265 | Msa1027330:intron | 45.0% |
| GTTTGAACCAACTCTTCCCA+AGG | - | chr7_1:59648658-59648677 | Msa1027330:intron | 45.0% | |
| TCAAGTCTCAACTAGGGGAT+GGG | + | chr7_1:59649136-59649155 | None:intergenic | 45.0% | |
| ACCTCTCAAGTCTCAACTAG+GGG | + | chr7_1:59649141-59649160 | None:intergenic | 45.0% | |
| TAACTAACCAAACGCTCCCA+AGG | - | chr7_1:59649179-59649198 | Msa1027330:CDS | 45.0% | |
| GTGCAGTTTATGCAGTCCTT+GGG | + | chr7_1:59649198-59649217 | None:intergenic | 45.0% | |
| TGTGCAGTTTATGCAGTCCT+TGG | + | chr7_1:59649199-59649218 | None:intergenic | 45.0% | |
| ! | ATAAAGAGGCCACTTTGACG+TGG | + | chr7_1:59649342-59649361 | None:intergenic | 45.0% |
| AGAAGTTGGAGGTGATTGCA+GGG | + | chr7_1:59649723-59649742 | None:intergenic | 45.0% | |
| TAGAAGTTGGAGGTGATTGC+AGG | + | chr7_1:59649724-59649743 | None:intergenic | 45.0% | |
| AGTCTCTCAGTCTCAGTCAA+TGG | + | chr7_1:59649809-59649828 | None:intergenic | 45.0% | |
| TGTTCAGTGCGACCATGTTT+AGG | + | chr7_1:59650179-59650198 | None:intergenic | 45.0% | |
| AGCAGAACTTGTCTTAGGGT+GGG | + | chr7_1:59650207-59650226 | None:intergenic | 45.0% | |
| CATACGGTAGTTACTGTCTG+TGG | - | chr7_1:59650255-59650274 | Msa1027330:intron | 45.0% | |
| GAGACAGTTTGTCTTGTGCT+GGG | + | chr7_1:59650379-59650398 | None:intergenic | 45.0% | |
| ACTGAAACATCTAAGCTGGG+GGG | + | chr7_1:59650507-59650526 | None:intergenic | 45.0% | |
| GTTCACAGAACAACGGCATT+GGG | + | chr7_1:59650953-59650972 | None:intergenic | 45.0% | |
| CATGACATGCCTGAAAGTCA+AGG | + | chr7_1:59650975-59650994 | None:intergenic | 45.0% | |
| !!! | AGAAAAGTGCTTTTGCACGG+GGG | + | chr7_1:59651077-59651096 | None:intergenic | 45.0% |
| !!! | GAGAAAAGTGCTTTTGCACG+GGG | + | chr7_1:59651078-59651097 | None:intergenic | 45.0% |
| TGAGACCAAATCAGAGAGGA+TGG | - | chr7_1:59651158-59651177 | Msa1027330:intron | 45.0% | |
| TCAACATTGTCGCAAACCAC+GGG | + | chr7_1:59651213-59651232 | None:intergenic | 45.0% | |
| ! | AGGATGAAGCTGATTTCCAC+AGG | - | chr7_1:59651265-59651284 | Msa1027330:intron | 45.0% |
| ! | CAACAGTTAGTTTCAGTGCC+AGG | + | chr7_1:59651350-59651369 | None:intergenic | 45.0% |
| TAATGTGCTTGCAGCATCAG+TGG | - | chr7_1:59651458-59651477 | Msa1027330:intron | 45.0% | |
| CTGGTGCATGATTAGAAGCA+AGG | + | chr7_1:59651518-59651537 | None:intergenic | 45.0% | |
| AACACGAAACTCTTCAGGCA+AGG | + | chr7_1:59651769-59651788 | None:intergenic | 45.0% | |
| ATCCATGGGCCAGTTTAGAA+CGG | - | chr7_1:59651812-59651831 | Msa1027330:intron | 45.0% | |
| !! | ATCCCTTTGGAACCTAGACA+TGG | - | chr7_1:59651944-59651963 | Msa1027330:intron | 45.0% |
| !! | TCCCTTTGGAACCTAGACAT+GGG | - | chr7_1:59651945-59651964 | Msa1027330:intron | 45.0% |
| TCCCATGTCTAGGTTCCAAA+GGG | + | chr7_1:59651949-59651968 | None:intergenic | 45.0% | |
| CTGTGCAATTCTGCTCAGTA+AGG | - | chr7_1:59651985-59652004 | Msa1027330:intron | 45.0% | |
| CAATTCTGCTCAGTAAGGCT+AGG | - | chr7_1:59651990-59652009 | Msa1027330:intron | 45.0% | |
| AATTCCTGTGCTTGGATGTC+GGG | - | chr7_1:59652053-59652072 | Msa1027330:intron | 45.0% | |
| AACATCCTTAATCAGTGCCC+CGG | + | chr7_1:59652261-59652280 | None:intergenic | 45.0% | |
| !! | TTGCCGTTAGGGGGTATTTA+GGG | + | chr7_1:59652578-59652597 | None:intergenic | 45.0% |
| !! | ATTGCCGTTAGGGGGTATTT+AGG | + | chr7_1:59652579-59652598 | None:intergenic | 45.0% |
| GGTAGTTAATTGCCGTTAGG+GGG | + | chr7_1:59652587-59652606 | None:intergenic | 45.0% | |
| CGGCAATTAACTACCATTCG+GGG | - | chr7_1:59652592-59652611 | Msa1027330:intron | 45.0% | |
| CAATTAACTACCATTCGGGG+AGG | - | chr7_1:59652595-59652614 | Msa1027330:intron | 45.0% | |
| CCGATTTAAAGGATGCCGAA+TGG | - | chr7_1:59652656-59652675 | Msa1027330:CDS | 45.0% | |
| ! | AACTACCGTTTTGCAGCGAA+CGG | - | chr7_1:59652684-59652703 | Msa1027330:CDS | 45.0% |
| AAACACCGTTCGCTGCAAAA+CGG | + | chr7_1:59652692-59652711 | None:intergenic | 45.0% | |
| ! | ATTGCTGTTCAGTAGGTGAC+TGG | - | chr7_1:59652713-59652732 | Msa1027330:CDS | 45.0% |
| ! | TTGCTGTTCAGTAGGTGACT+GGG | - | chr7_1:59652714-59652733 | Msa1027330:CDS | 45.0% |
| !!! | GACCGGGGCAATTTTTTAAG+AGG | + | chr7_1:59652778-59652797 | None:intergenic | 45.0% |
| AAAATTGCCCCGGTCCAATA+TGG | - | chr7_1:59652783-59652802 | Msa1027330:CDS | 45.0% | |
| AAATTGCCCCGGTCCAATAT+GGG | - | chr7_1:59652784-59652803 | Msa1027330:CDS | 45.0% | |
| !! | TAATAATAATAATTAATAAC+TGG | + | chr7_1:59646645-59646664 | None:intergenic | 5.0% |
| !! | GAAAATATTTATATAAATAA+CGG | - | chr7_1:59648740-59648759 | Msa1027330:intron | 5.0% |
| !!! | TTAAATTTTAATTAATTTTC+AGG | - | chr7_1:59649662-59649681 | Msa1027330:intron | 5.0% |
| ACGATGAAGAGCGGTGGTTT+GGG | - | chr7_1:59646788-59646807 | Msa1027330:three_prime_UTR | 50.0% | |
| GTTCCTCTCGTCTTCCTTCT+CGG | - | chr7_1:59646902-59646921 | Msa1027330:three_prime_UTR | 50.0% | |
| AACTGTTGTGGAGACCGAGA+AGG | + | chr7_1:59646919-59646938 | None:intergenic | 50.0% | |
| !! | ACATGTGTCGGTGTCAGACA+TGG | - | chr7_1:59647456-59647475 | Msa1027330:CDS | 50.0% |
| CTTGGCCAAACTGGATTACC+AGG | + | chr7_1:59647609-59647628 | None:intergenic | 50.0% | |
| GGTGGAGCTCATAATCCACT+TGG | - | chr7_1:59647700-59647719 | Msa1027330:CDS | 50.0% | |
| TCCACTTGGGCACAATTGCT+TGG | - | chr7_1:59647714-59647733 | Msa1027330:CDS | 50.0% | |
| ACCAAGCAATTGTGCCCAAG+TGG | + | chr7_1:59647718-59647737 | None:intergenic | 50.0% | |
| TTCTGCGGGATACTGTGTCA+CGG | - | chr7_1:59648320-59648339 | Msa1027330:intron | 50.0% | |
| CAGAGAACCTTGGGAAGAGT+TGG | + | chr7_1:59648668-59648687 | None:intergenic | 50.0% | |
| TCTGGAGGAATCTGTGTGTC+CGG | + | chr7_1:59648966-59648985 | None:intergenic | 50.0% | |
| CTCAACTAGGGGATGGGAAT+GGG | + | chr7_1:59649130-59649149 | None:intergenic | 50.0% | |
| TCTCAACTAGGGGATGGGAA+TGG | + | chr7_1:59649131-59649150 | None:intergenic | 50.0% | |
| CTCAAGTCTCAACTAGGGGA+TGG | + | chr7_1:59649137-59649156 | None:intergenic | 50.0% | |
| TCCCCTAGTTGAGACTTGAG+AGG | - | chr7_1:59649137-59649156 | Msa1027330:CDS | 50.0% | |
| ATCGGGTCGTAGGAAATCAG+AGG | - | chr7_1:59649992-59650011 | Msa1027330:intron | 50.0% | |
| CAGCAGAACTTGTCTTAGGG+TGG | + | chr7_1:59650208-59650227 | None:intergenic | 50.0% | |
| AAGTCGTGCGAGCTCACATA+CGG | - | chr7_1:59650239-59650258 | Msa1027330:intron | 50.0% | |
| ! | GCTGGGAGTTTTGCAATGCT+AGG | + | chr7_1:59650362-59650381 | None:intergenic | 50.0% |
| CGAGACAGTTTGTCTTGTGC+TGG | + | chr7_1:59650380-59650399 | None:intergenic | 50.0% | |
| ! | GAACAACGGCATTGGGTTTG+AGG | + | chr7_1:59650946-59650965 | None:intergenic | 50.0% |
| GGTTCACAGAACAACGGCAT+TGG | + | chr7_1:59650954-59650973 | None:intergenic | 50.0% | |
| GGGTTGAGACCAAATCAGAG+AGG | - | chr7_1:59651154-59651173 | Msa1027330:intron | 50.0% | |
| CAACATTGTCGCAAACCACG+GGG | + | chr7_1:59651212-59651231 | None:intergenic | 50.0% | |
| GGAATGCACTCTGTTTCCTG+TGG | + | chr7_1:59651284-59651303 | None:intergenic | 50.0% | |
| ! | GCCAAAGAGTTTTCACTGCC+TGG | - | chr7_1:59651329-59651348 | Msa1027330:intron | 50.0% |
| GCCAGGCAGTGAAAACTCTT+TGG | + | chr7_1:59651333-59651352 | None:intergenic | 50.0% | |
| ! | GTTCTAAACTGGCCCATGGA+TGG | + | chr7_1:59651813-59651832 | None:intergenic | 50.0% |
| ! | TTCCGTTCTAAACTGGCCCA+TGG | + | chr7_1:59651817-59651836 | None:intergenic | 50.0% |
| AGCGAGACTTGTCATCCCTT+TGG | - | chr7_1:59651931-59651950 | Msa1027330:intron | 50.0% | |
| CTCCCATGTCTAGGTTCCAA+AGG | + | chr7_1:59651950-59651969 | None:intergenic | 50.0% | |
| ATTCCTGTGCTTGGATGTCG+GGG | - | chr7_1:59652054-59652073 | Msa1027330:intron | 50.0% | |
| CAAACTCTCTCCACCTCACT+AGG | + | chr7_1:59652094-59652113 | None:intergenic | 50.0% | |
| CTAGTGAGGTGGAGAGAGTT+TGG | - | chr7_1:59652092-59652111 | Msa1027330:intron | 50.0% | |
| ACATCCTTAATCAGTGCCCC+GGG | + | chr7_1:59652260-59652279 | None:intergenic | 50.0% | |
| TACTTCCTTAACCAGTGCCC+CGG | - | chr7_1:59652368-59652387 | Msa1027330:intron | 50.0% | |
| TTGGGCTGAGCTCAATGCAT+TGG | - | chr7_1:59652452-59652471 | Msa1027330:intron | 50.0% | |
| GAGCAATTGCTACGTGCCTA+AGG | + | chr7_1:59652538-59652557 | None:intergenic | 50.0% | |
| CACACCTAGCAATTGCTCAC+AGG | + | chr7_1:59652742-59652761 | None:intergenic | 50.0% | |
| TATGTGGGGCCATCCCATAT+TGG | + | chr7_1:59652800-59652819 | None:intergenic | 50.0% | |
| TCTGAAGACCAGGCTATGTG+GGG | + | chr7_1:59652814-59652833 | None:intergenic | 50.0% | |
| ! | CTCTGAAGACCAGGCTATGT+GGG | + | chr7_1:59652815-59652834 | None:intergenic | 50.0% |
| ! | TCTCTGAAGACCAGGCTATG+TGG | + | chr7_1:59652816-59652835 | None:intergenic | 50.0% |
| AAAGCGACGATGAAGAGCGG+TGG | - | chr7_1:59646782-59646801 | Msa1027330:three_prime_UTR | 55.0% | |
| GACGATGAAGAGCGGTGGTT+TGG | - | chr7_1:59646787-59646806 | Msa1027330:three_prime_UTR | 55.0% | |
| GGCGCGGTTCAATCATCGTA+CGG | - | chr7_1:59646809-59646828 | Msa1027330:three_prime_UTR | 55.0% | |
| TCAATCATCGTACGGCGTCC+CGG | - | chr7_1:59646817-59646836 | Msa1027330:three_prime_UTR | 55.0% | |
| GAAGACGAGAGGAACGAGCA+TGG | + | chr7_1:59646897-59646916 | None:intergenic | 55.0% | |
| AGACCGAGAAGGAAGACGAG+AGG | + | chr7_1:59646908-59646927 | None:intergenic | 55.0% | |
| GCATGAACACTTCGGATCGC+AGG | + | chr7_1:59647505-59647524 | None:intergenic | 55.0% | |
| ! | ACCTTTGGGTTTCCGGGGAA+AGG | - | chr7_1:59647580-59647599 | Msa1027330:CDS | 55.0% |
| ! | CCTTTGGGTTTCCGGGGAAA+GGG | - | chr7_1:59647581-59647600 | Msa1027330:CDS | 55.0% |
| ! | CTTTGGGTTTCCGGGGAAAG+GGG | - | chr7_1:59647582-59647601 | Msa1027330:CDS | 55.0% |
| ! | AGGATGTGTCTGAGGTACGG+TGG | - | chr7_1:59648249-59648268 | Msa1027330:intron | 55.0% |
| AGGGGATGGGAATGGGTACA+TGG | + | chr7_1:59649123-59649142 | None:intergenic | 55.0% | |
| !! | ATGCAGTCCTTGGGAGCGTT+TGG | + | chr7_1:59649189-59649208 | None:intergenic | 55.0% |
| GATTGCAGGGCAGCATTAGG+TGG | + | chr7_1:59649710-59649729 | None:intergenic | 55.0% | |
| GGTGATTGCAGGGCAGCATT+AGG | + | chr7_1:59649713-59649732 | None:intergenic | 55.0% | |
| ! | CACGGGGACTGATTTAGCTC+TGG | + | chr7_1:59651196-59651215 | None:intergenic | 55.0% |
| CAGAGCTAAATCAGTCCCCG+TGG | - | chr7_1:59651194-59651213 | Msa1027330:intron | 55.0% | |
| GGAAATGTTAACCGGTGCCC+CGG | - | chr7_1:59652239-59652258 | Msa1027330:intron | 55.0% | |
| GAAATGTTAACCGGTGCCCC+GGG | - | chr7_1:59652240-59652259 | Msa1027330:intron | 55.0% | |
| AAATGTTAACCGGTGCCCCG+GGG | - | chr7_1:59652241-59652260 | Msa1027330:intron | 55.0% | |
| CATCCTTAATCAGTGCCCCG+GGG | + | chr7_1:59652259-59652278 | None:intergenic | 55.0% | |
| ACTTCCTTAACCAGTGCCCC+GGG | - | chr7_1:59652369-59652388 | Msa1027330:intron | 55.0% | |
| TCATGTTAACCAGTGCCCCC+GGG | + | chr7_1:59652389-59652408 | None:intergenic | 55.0% | |
| GTCATGTTAACCAGTGCCCC+CGG | + | chr7_1:59652390-59652409 | None:intergenic | 55.0% | |
| GGTGCCTGTGAGCAATTGCT+AGG | - | chr7_1:59652735-59652754 | Msa1027330:CDS | 55.0% | |
| CCCTTTCCCCGGAAACCCAA+AGG | + | chr7_1:59647584-59647603 | None:intergenic | 60.0% | |
| ATTACCAGGGCCCCTTTCCC+CGG | + | chr7_1:59647595-59647614 | None:intergenic | 60.0% | |
| GGGGCCCTGGTAATCCAGTT+TGG | - | chr7_1:59647601-59647620 | Msa1027330:CDS | 60.0% | |
| TTGGCGCACTTGTCTGCACC+AGG | - | chr7_1:59649372-59649391 | Msa1027330:CDS | 60.0% | |
| TGCAGGGCAGCATTAGGTGG+CGG | + | chr7_1:59649707-59649726 | None:intergenic | 60.0% | |
| CAACCCCGACATCCAAGCAC+AGG | + | chr7_1:59652060-59652079 | None:intergenic | 60.0% | |
| CTTCCTTAACCAGTGCCCCG+GGG | - | chr7_1:59652370-59652389 | Msa1027330:intron | 60.0% | |
| TTCCTTAACCAGTGCCCCGG+GGG | - | chr7_1:59652371-59652390 | Msa1027330:intron | 60.0% | |
| CATGTTAACCAGTGCCCCCG+GGG | + | chr7_1:59652388-59652407 | None:intergenic | 60.0% | |
| TGCCCCGGTCCAATATGGGA+TGG | - | chr7_1:59652788-59652807 | Msa1027330:exon | 60.0% | |
| GGCCATCCCATATTGGACCG+GGG | + | chr7_1:59652793-59652812 | None:intergenic | 60.0% | |
| GGGCCATCCCATATTGGACC+GGG | + | chr7_1:59652794-59652813 | None:intergenic | 60.0% | |
| GGGGCCATCCCATATTGGAC+CGG | + | chr7_1:59652795-59652814 | None:intergenic | 60.0% | |
| ! | GAAGAGCGGTGGTTTGGGCG+CGG | - | chr7_1:59646793-59646812 | Msa1027330:three_prime_UTR | 65.0% |
| CTCTCCACCGTCGTTTCGCC+GGG | + | chr7_1:59646838-59646857 | None:intergenic | 65.0% | |
| CCTCTCCACCGTCGTTTCGC+CGG | + | chr7_1:59646839-59646858 | None:intergenic | 65.0% | |
| ! | GCAGCATTAGGTGGCGGTGG+CGG | + | chr7_1:59649701-59649720 | None:intergenic | 65.0% |
| ! | AGGGCAGCATTAGGTGGCGG+TGG | + | chr7_1:59649704-59649723 | None:intergenic | 65.0% |
| TAATCAGTGCCCCGGGGCAC+CGG | + | chr7_1:59652253-59652272 | None:intergenic | 65.0% | |
| !! | GTGCCCCGGGGCACTGATTA+AGG | - | chr7_1:59652253-59652272 | Msa1027330:intron | 65.0% |
| TGGGATGGCCCCACATAGCC+TGG | - | chr7_1:59652803-59652822 | Msa1027330:exon | 65.0% | |
| ACGGCGTCCCGGCGAAACGA+CGG | - | chr7_1:59646828-59646847 | Msa1027330:three_prime_UTR | 70.0% | |
| CCGGCGAAACGACGGTGGAG+AGG | - | chr7_1:59646836-59646855 | Msa1027330:three_prime_UTR | 70.0% | |
| GTTTCCGGGGAAAGGGGCCC+TGG | - | chr7_1:59647588-59647607 | Msa1027330:CDS | 70.0% | |
| ! | GCATTAGGTGGCGGTGGCGG+CGG | + | chr7_1:59649698-59649717 | None:intergenic | 70.0% |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | + | chr7_1:59652376-59652395 | None:intergenic | 70.0% |
| GCGTCCCGGCGAAACGACGG+TGG | - | chr7_1:59646831-59646850 | Msa1027330:three_prime_UTR | 75.0% | |
| ! | AACCAGTGCCCCGGGGGCAC+TGG | - | chr7_1:59652377-59652396 | Msa1027330:intron | 75.0% |
| AACCAGTGCCCCCGGGGCAC+TGG | + | chr7_1:59652382-59652401 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 59646555 | 59653040 | 59646555 | ID=Msa1027330;Name=Msa1027330 |
| chr7_1 | mRNA | 59646555 | 59653040 | 59646555 | ID=Msa1027330-mRNA-1;Parent=Msa1027330;Name=Msa1027330-mRNA-1;_AED=0.25;_eAED=0.25;_QI=236|0.88|0.9|1|0.88|0.8|10|688|461 |
| chr7_1 | exon | 59646555 | 59647178 | 59646555 | ID=Msa1027330-mRNA-1:exon:12185;Parent=Msa1027330-mRNA-1 |
| chr7_1 | exon | 59647362 | 59647989 | 59647362 | ID=Msa1027330-mRNA-1:exon:12184;Parent=Msa1027330-mRNA-1 |
| chr7_1 | exon | 59648380 | 59648440 | 59648380 | ID=Msa1027330-mRNA-1:exon:12183;Parent=Msa1027330-mRNA-1 |
| chr7_1 | exon | 59649121 | 59649437 | 59649121 | ID=Msa1027330-mRNA-1:exon:12182;Parent=Msa1027330-mRNA-1 |
| chr7_1 | exon | 59649850 | 59649911 | 59649850 | ID=Msa1027330-mRNA-1:exon:12181;Parent=Msa1027330-mRNA-1 |
| chr7_1 | exon | 59650003 | 59650072 | 59650003 | ID=Msa1027330-mRNA-1:exon:12180;Parent=Msa1027330-mRNA-1 |
| chr7_1 | exon | 59650916 | 59650975 | 59650916 | ID=Msa1027330-mRNA-1:exon:12179;Parent=Msa1027330-mRNA-1 |
| chr7_1 | exon | 59651333 | 59651392 | 59651333 | ID=Msa1027330-mRNA-1:exon:12178;Parent=Msa1027330-mRNA-1 |
| chr7_1 | exon | 59651515 | 59651546 | 59651515 | ID=Msa1027330-mRNA-1:exon:12177;Parent=Msa1027330-mRNA-1 |
| chr7_1 | exon | 59652645 | 59653040 | 59652645 | ID=Msa1027330-mRNA-1:exon:12176;Parent=Msa1027330-mRNA-1 |
| chr7_1 | five_prime_UTR | 59652805 | 59653040 | 59652805 | ID=Msa1027330-mRNA-1:five_prime_utr;Parent=Msa1027330-mRNA-1 |
| chr7_1 | CDS | 59652645 | 59652804 | 59652645 | ID=Msa1027330-mRNA-1:cds;Parent=Msa1027330-mRNA-1 |
| chr7_1 | CDS | 59651515 | 59651546 | 59651515 | ID=Msa1027330-mRNA-1:cds;Parent=Msa1027330-mRNA-1 |
| chr7_1 | CDS | 59651333 | 59651392 | 59651333 | ID=Msa1027330-mRNA-1:cds;Parent=Msa1027330-mRNA-1 |
| chr7_1 | CDS | 59650916 | 59650975 | 59650916 | ID=Msa1027330-mRNA-1:cds;Parent=Msa1027330-mRNA-1 |
| chr7_1 | CDS | 59650003 | 59650072 | 59650003 | ID=Msa1027330-mRNA-1:cds;Parent=Msa1027330-mRNA-1 |
| chr7_1 | CDS | 59649850 | 59649911 | 59649850 | ID=Msa1027330-mRNA-1:cds;Parent=Msa1027330-mRNA-1 |
| chr7_1 | CDS | 59649121 | 59649437 | 59649121 | ID=Msa1027330-mRNA-1:cds;Parent=Msa1027330-mRNA-1 |
| chr7_1 | CDS | 59648380 | 59648440 | 59648380 | ID=Msa1027330-mRNA-1:cds;Parent=Msa1027330-mRNA-1 |
| chr7_1 | CDS | 59647426 | 59647989 | 59647426 | ID=Msa1027330-mRNA-1:cds;Parent=Msa1027330-mRNA-1 |
| chr7_1 | three_prime_UTR | 59647362 | 59647425 | 59647362 | ID=Msa1027330-mRNA-1:three_prime_utr;Parent=Msa1027330-mRNA-1 |
| chr7_1 | three_prime_UTR | 59646555 | 59647178 | 59646555 | ID=Msa1027330-mRNA-1:three_prime_utr;Parent=Msa1027330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
