AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1111530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1111530 MtrunA17_Chr7g0246481 96.864 1116 25 4 1 1108 1 1114 0.0 2219
Msa1111530 MtrunA17_Chr8g0350951 80.618 939 162 6 176 1108 125 1049 0.0 1570
Msa1111530 MtrunA17_Chr5g0398161 68.713 847 257 5 267 1108 11 854 0.0 1228
Msa1111530 MtrunA17_Chr5g0398171 68.477 847 253 7 267 1108 11 848 0.0 1216
Msa1111530 MtrunA17_Chr3g0143471 52.736 859 362 10 290 1107 10 865 0.0 921
Msa1111530 MtrunA17_Chr8g0380631 54.045 853 357 10 282 1107 4 848 0.0 915
Msa1111530 MtrunA17_Chr5g0406161 52.164 855 351 10 293 1098 16 861 0.0 900
Msa1111530 MtrunA17_Chr2g0333021 46.537 823 395 15 291 1097 4 797 0.0 734
Msa1111530 MtrunA17_Chr4g0003411 46.667 825 386 17 293 1097 6 796 0.0 732
Msa1111530 MtrunA17_Chr3g0137791 45.618 833 406 18 292 1098 4 815 0.0 711
Msa1111530 MtrunA17_Chr3g0137821 44.337 830 417 18 292 1098 4 811 0.0 685
Msa1111530 MtrunA17_Chr2g0330431 41.299 770 374 24 345 1097 36 744 1.45e-177 538
Msa1111530 MtrunA17_Chr8g0341931 39.487 780 368 24 345 1097 39 741 1.54e-169 518
Msa1111530 MtrunA17_Chr5g0406151 61.905 63 24 0 618 680 16 78 1.94e-23 95.5
Msa1111530 MtrunA17_Chr1g0192401 32.450 302 132 15 749 1027 692 944 1.50e-22 104
Msa1111530 MtrunA17_Chr1g0192401 29.339 242 130 9 497 723 352 567 1.70e-18 91.7
Msa1111530 MtrunA17_Chr2g0295411 34.483 203 93 9 799 992 785 956 1.16e-18 92.4
Msa1111530 MtrunA17_Chr2g0295411 27.801 241 130 9 497 720 378 591 3.69e-15 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1111530 AT2G42010.1 76.064 940 195 9 176 1108 167 1083 0.0 1468
Msa1111530 AT2G42010.2 74.093 965 195 10 176 1108 167 1108 0.0 1456
Msa1111530 AT4G00240.1 75.898 863 200 5 248 1108 71 927 0.0 1358
Msa1111530 AT4G00240.2 73.233 863 188 5 248 1108 71 892 0.0 1294
Msa1111530 AT4G00240.3 78.452 775 164 3 336 1108 2 775 0.0 1282
Msa1111530 AT4G11850.1 70.357 840 235 5 278 1108 24 858 0.0 1241
Msa1111530 AT4G11840.1 69.395 843 242 6 278 1108 28 866 0.0 1236
Msa1111530 AT4G11830.2 67.180 844 259 7 278 1108 18 856 0.0 1192
Msa1111530 AT4G11840.2 67.141 843 231 7 278 1108 28 836 0.0 1181
Msa1111530 AT4G11830.1 67.710 799 244 4 320 1108 30 824 0.0 1154
Msa1111530 AT4G35790.2 52.771 866 359 10 282 1107 1 856 0.0 910
Msa1111530 AT4G35790.1 52.109 877 359 11 282 1107 1 867 0.0 903
Msa1111530 AT4G11830.4 68.013 619 192 5 278 892 18 634 0.0 881
Msa1111530 AT4G11830.3 69.052 601 180 5 278 874 18 616 0.0 868
Msa1111530 AT3G15730.1 45.828 827 396 15 292 1098 5 799 0.0 730
Msa1111530 AT1G52570.1 45.663 830 399 18 288 1097 1 798 0.0 714
Msa1111530 AT1G52570.3 45.663 830 399 18 288 1097 1 798 0.0 714
Msa1111530 AT1G52570.2 45.663 830 399 18 288 1097 1 798 0.0 714
Msa1111530 AT4G35790.3 51.906 682 286 8 284 926 3 681 0.0 703
Msa1111530 AT5G25370.1 44.794 826 417 16 291 1098 5 809 0.0 669
Msa1111530 AT5G25370.3 44.794 826 417 16 291 1098 5 809 0.0 669
Msa1111530 AT5G25370.2 44.794 826 417 16 291 1098 5 809 0.0 669
Msa1111530 AT5G25370.4 47.390 747 360 14 367 1098 6 734 0.0 656
Msa1111530 AT1G55180.2 38.710 775 388 26 345 1097 19 728 2.28e-159 491
Msa1111530 AT1G55180.1 38.710 775 388 26 345 1097 41 750 4.09e-159 491
Msa1111530 AT3G05630.1 28.336 607 276 25 512 1025 381 921 3.03e-37 152
Msa1111530 AT3G16785.3 35.468 203 97 9 796 992 756 930 6.68e-19 93.6
Msa1111530 AT3G16785.3 31.489 235 113 9 516 735 390 591 6.54e-16 83.6
Msa1111530 AT3G16785.2 35.468 203 97 9 796 992 756 930 6.68e-19 93.6
Msa1111530 AT3G16785.2 31.489 235 113 9 516 735 390 591 6.54e-16 83.6
Msa1111530 AT3G16785.1 35.468 203 97 9 796 992 756 930 6.80e-19 93.6
Msa1111530 AT3G16785.1 31.489 235 113 9 516 735 390 591 7.26e-16 83.6
Msa1111530 AT3G16785.6 35.468 203 97 9 796 992 756 930 6.84e-19 93.2
Msa1111530 AT3G16785.6 31.489 235 113 9 516 735 390 591 6.28e-16 83.6
Msa1111530 AT3G16785.5 35.468 203 97 9 796 992 756 930 6.84e-19 93.2
Msa1111530 AT3G16785.5 31.489 235 113 9 516 735 390 591 6.28e-16 83.6
Msa1111530 AT3G16785.4 35.468 203 97 9 796 992 756 930 7.89e-19 93.2
Msa1111530 AT3G16785.4 31.489 235 113 9 516 735 390 591 5.98e-16 84.0

Find 342 sgRNAs with CRISPR-Local

Find 483 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGAGTGCTTCTCCTTATT+TGG 0.103072 7_3:+57229771 Msa1111530:CDS
TCCTACATCAAGAAGTATTT+TGG 0.129376 7_3:+57229799 Msa1111530:CDS
TTCATGGAAATTTAGATATA+TGG 0.133175 7_3:+57228979 Msa1111530:CDS
GTCGCCTCTCTTGGATCTTT+TGG 0.168800 7_3:-57231742 None:intergenic
AAATTTGATATTCAATTAAA+AGG 0.193189 7_3:-57227888 None:intergenic
AGTGCAGCACCTTGCTTATA+AGG 0.223634 7_3:-57229383 None:intergenic
TCAGTGGCAAATGCGGTAAT+TGG 0.236146 7_3:+57229146 Msa1111530:CDS
TACCCTATACTGAATAATAA+TGG 0.248100 7_3:+57229356 Msa1111530:CDS
CTTTCGGTTTCGGATTATTC+TGG 0.249584 7_3:+57228876 Msa1111530:CDS
TGAGGGTGAGGGTTAGGGTT+AGG 0.252423 7_3:-57228156 None:intergenic
ATTGAGAATATAGTGTTTAA+TGG 0.256386 7_3:+57228083 Msa1111530:exon
GTCCATATTTGGAAGATTCT+TGG 0.264946 7_3:-57229012 None:intergenic
TCCCATTATTATTCAGTATA+GGG 0.268524 7_3:-57229358 None:intergenic
GATAGAAATTGTACAATATA+TGG 0.276070 7_3:-57227751 None:intergenic
ACAAGCAAGAATGATGTAAT+TGG 0.277470 7_3:-57227834 None:intergenic
GAAAGAATTCCAGATGTTAT+TGG 0.278228 7_3:+57231521 Msa1111530:CDS
GTATAGTCAAACACCTTTAC+AGG 0.282626 7_3:+57233720 Msa1111530:three_prime_UTR
GGTGGATGAGGGTGAGGGTT+AGG 0.286463 7_3:-57228162 None:intergenic
CAAGCAAGAACAATGGTAAT+TGG 0.287840 7_3:-57227971 None:intergenic
ACCGAAATCGAATGCATAAA+AGG 0.292897 7_3:-57228753 None:intergenic
CTCAGGTAGACTTTCGGTTT+CGG 0.294707 7_3:+57228866 Msa1111530:CDS
GCGCCTGTTGGAACACCTTC+TGG 0.300625 7_3:-57232287 None:intergenic
GAAAATAAATATGAAAATAG+TGG 0.310600 7_3:-57227713 None:intergenic
CATACTTGTGGACTATTTGC+TGG 0.310869 7_3:-57232806 None:intergenic
AGCCAAGAATCTTCCAAATA+TGG 0.313757 7_3:+57229010 Msa1111530:CDS
ACCTGAACATGCCATGATTC+AGG 0.319245 7_3:-57231575 None:intergenic
CCTAATGTGTTGCTTGATAG+TGG 0.323933 7_3:+57229569 Msa1111530:CDS
TTGTTCTTCTTCATCTCAAT+TGG 0.324120 7_3:+57227644 Msa1111530:five_prime_UTR
TGTGAAGAAATGTAAGGATA+TGG 0.325932 7_3:-57228240 None:intergenic
TTGTGGAACATGTCCATATT+TGG 0.326355 7_3:-57229023 None:intergenic
ATAGCTTCTCTGGTCCTTAC+TGG 0.327052 7_3:+57228559 Msa1111530:CDS
AAGAGTGCTTCTCCTTATTT+GGG 0.329101 7_3:+57229772 Msa1111530:CDS
GATTATTCTGGCTCATTTAA+CGG 0.332639 7_3:+57228888 Msa1111530:CDS
TGTTTAATGGATAATAACTA+TGG 0.337245 7_3:+57228096 Msa1111530:exon
ATTGATTCAAGTTCTGTTAA+GGG 0.338987 7_3:+57231715 Msa1111530:CDS
GAGGGTGAGGGTTAGGGTTA+GGG 0.341144 7_3:-57228155 None:intergenic
GAACATTAACCAACGCTCTA+TGG 0.341262 7_3:+57233045 Msa1111530:CDS
CCCTTTCGATCAACTTCTAC+AGG 0.342087 7_3:-57233491 None:intergenic
CTTGTATAATAATCAAGAAT+TGG 0.345619 7_3:-57233786 None:intergenic
ACCTTGCCAGTCGCCTCTCT+TGG 0.348515 7_3:-57231751 None:intergenic
CCACACAAAGGATTCTATTC+TGG 0.348578 7_3:+57232312 Msa1111530:CDS
ATGTAGGATCATCCCAAATA+AGG 0.349764 7_3:-57229784 None:intergenic
CGCCGCTTGATATATATTAC+AGG 0.353365 7_3:+57229650 Msa1111530:CDS
AGGATAAGAGGGTGGGGCTG+AGG 0.354571 7_3:-57228379 None:intergenic
CCACTATCAAGCAACACATT+AGG 0.358018 7_3:-57229569 None:intergenic
TGAGACAATTTCAAAGGCTT+TGG 0.358156 7_3:+57232667 Msa1111530:CDS
AATTGATTCAAGTTCTGTTA+AGG 0.358342 7_3:+57231714 Msa1111530:CDS
CGCACGCATTCAAGGCTCTC+AGG 0.358697 7_3:-57233383 None:intergenic
TCATGGAAATTTAGATATAT+GGG 0.359304 7_3:+57228980 Msa1111530:CDS
TAAGGGTTTGGATACCTATA+TGG 0.359649 7_3:-57228123 None:intergenic
TAATTTACATCTCATCCTAA+TGG 0.361494 7_3:-57233650 None:intergenic
TCATCGGCTCTTCTTACAAT+TGG 0.363852 7_3:+57231987 Msa1111530:CDS
TATGGATCTTGAGGTGGATA+TGG 0.372656 7_3:-57228183 None:intergenic
GCAATTCTGAAAACCCTGTT+TGG 0.375621 7_3:+57229186 Msa1111530:CDS
GATGGTGGTGGTGGTGATCT+AGG 0.376403 7_3:-57228285 None:intergenic
GCTATTGAACTTGATGTATC+TGG 0.379485 7_3:-57228582 None:intergenic
GATTTGCATTCTAAAATTGA+TGG 0.382709 7_3:+57231386 Msa1111530:CDS
GCAGGAGCTGGAGGCGATGC+AGG 0.382905 7_3:-57228717 None:intergenic
CACTATCAAGCAACACATTA+GGG 0.383119 7_3:-57229568 None:intergenic
TCCTGAATCATGGCATGTTC+AGG 0.384686 7_3:+57231574 Msa1111530:CDS
AGGAACATGGTAAGGATAAG+AGG 0.387378 7_3:-57228391 None:intergenic
TCAAAGGCTTTGGTTGAAGC+TGG 0.388011 7_3:+57232677 Msa1111530:CDS
GGTATAATCGGATGGGTAAC+CGG 0.389842 7_3:-57229711 None:intergenic
GACATGTTCCACAAAACATT+GGG 0.390778 7_3:+57229032 Msa1111530:CDS
ATGATATATGTTCATTCAAA+AGG 0.392543 7_3:+57232983 Msa1111530:CDS
ACCCTATACTGAATAATAAT+GGG 0.395374 7_3:+57229357 Msa1111530:CDS
GGTCGGTGTGGCACAAAGTT+AGG 0.395497 7_3:+57229675 Msa1111530:CDS
TGACCTGCAGCTGCAGGAGC+TGG 0.397148 7_3:-57228729 None:intergenic
GCAGTCTGCTTATCCGCGTT+TGG 0.399725 7_3:+57228647 Msa1111530:CDS
AGGGTGAGGGTTAGGGTTAG+GGG 0.400290 7_3:-57228154 None:intergenic
TAACCTTTCGCACGCATTCA+AGG 0.402473 7_3:-57233391 None:intergenic
CAAGCGGCGAGCTTGACTTA+TGG 0.403981 7_3:-57229636 None:intergenic
GAGCAATTGGTGAAATGAAC+TGG 0.408220 7_3:+57233414 Msa1111530:CDS
GTGGATGAGGGTGAGGGTTA+GGG 0.408959 7_3:-57228161 None:intergenic
GTGCGAAAGGTTAGAGCAAT+TGG 0.409242 7_3:+57233401 Msa1111530:CDS
TAGAAGTGTTGACTCCAAAC+AGG 0.409473 7_3:-57229200 None:intergenic
CGCTAATAATTTAATTCCAA+TGG 0.410249 7_3:+57232190 Msa1111530:CDS
ATGATCTAATGAACAATGTT+AGG 0.410783 7_3:+57228670 Msa1111530:CDS
GAAGATCAGGACGGTCTTCA+TGG 0.410806 7_3:-57228524 None:intergenic
AATGGTAAGATTCTCCTTCA+TGG 0.411414 7_3:-57233585 None:intergenic
GAATAACTCCTTCTCCGGTT+GGG 0.411996 7_3:+57228818 Msa1111530:CDS
AAGATCACCTAAGGTATAAT+CGG 0.412967 7_3:-57229723 None:intergenic
TTCCCATTATTATTCAGTAT+AGG 0.416632 7_3:-57229359 None:intergenic
GGAGCAGGGCCTGAATATAT+TGG 0.417298 7_3:+57229464 Msa1111530:CDS
ATTGTTCCGGTGCAGAATAA+AGG 0.417796 7_3:+57228936 Msa1111530:CDS
CCCGAGTATATTTGTTCCAC+TGG 0.419295 7_3:-57229314 None:intergenic
GTATTATAATTGATCATCAA+TGG 0.424910 7_3:+57227924 Msa1111530:five_prime_UTR
CTATGTAGATCCATGGATAT+AGG 0.425881 7_3:+57233309 Msa1111530:intron
TATCCTTACCATGTTCCTCC+AGG 0.428717 7_3:+57228396 Msa1111530:CDS
GCAGGAACGCCAATATATTC+AGG 0.430118 7_3:-57229473 None:intergenic
TCACTTTGGGCAGAACATAC+TGG 0.430122 7_3:+57233335 Msa1111530:CDS
GGATATGGTGGATGAGGGTG+AGG 0.431552 7_3:-57228168 None:intergenic
ATAACTATGGTTATCCATAT+AGG 0.433136 7_3:+57228109 Msa1111530:CDS
TTGTGAGTTAATCCTAAGAA+AGG 0.434077 7_3:-57233754 None:intergenic
TGTATATTTAATACTTAATG+TGG 0.436390 7_3:+57233840 Msa1111530:three_prime_UTR
AAGGAGAATCTTACCATTTG+AGG 0.439135 7_3:+57233590 Msa1111530:CDS
TTACAATTGGAGTCAACATA+AGG 0.439529 7_3:+57232000 Msa1111530:CDS
AATAACTCCTTCTCCGGTTG+GGG 0.441183 7_3:+57228819 Msa1111530:CDS
TGGATATAGGATGTCACTTT+GGG 0.441193 7_3:+57233322 Msa1111530:CDS
TGTTCTTCTTCATCTCAATT+GGG 0.443625 7_3:+57227645 Msa1111530:five_prime_UTR
GGCACAAAGTTAGGTTGATA+AGG 0.443656 7_3:+57229684 Msa1111530:CDS
TAAAAGCTCAATTGCTCCAT+TGG 0.443891 7_3:-57229428 None:intergenic
GGTGAACTCAGGTAGACTTT+CGG 0.444029 7_3:+57228860 Msa1111530:CDS
AAGAGATTACCGTGAAAGTT+GGG 0.445566 7_3:-57230892 None:intergenic
TACGAAAATATCAGTGTGTC+GGG 0.446660 7_3:+57232773 Msa1111530:CDS
ATTAGTACATTTCATCATCA+AGG 0.446814 7_3:+57228060 Msa1111530:five_prime_UTR
TGATGTCTTAACTAACTTTG+AGG 0.447629 7_3:+57231421 Msa1111530:CDS
TCAGAGCATGCAGATTGTTC+CGG 0.448698 7_3:+57228923 Msa1111530:CDS
TTGTCTTCTTGTCAGGAAGT+TGG 0.449853 7_3:+57230695 Msa1111530:intron
GCATTCTAAAATTGATGGTC+CGG 0.450215 7_3:+57231391 Msa1111530:CDS
ATGGATATAGGATGTCACTT+TGG 0.453941 7_3:+57233321 Msa1111530:CDS
CAGTGGCAAATGCGGTAATT+GGG 0.454948 7_3:+57229147 Msa1111530:CDS
TGATGAAGAGGAGCAGGTGG+AGG 0.455283 7_3:-57228348 None:intergenic
TAAGAGATTACCGTGAAAGT+TGG 0.456097 7_3:-57230893 None:intergenic
CCTCCAGCTCCTGCAGCTGC+AGG 0.457583 7_3:+57228726 Msa1111530:CDS
CGAATAACTCCTTCTCCGGT+TGG 0.458011 7_3:+57228817 Msa1111530:CDS
GTGCGGGAAAACGACATAGC+TGG 0.461330 7_3:+57230320 Msa1111530:CDS
GACATTACAAACAATACATA+AGG 0.461674 7_3:+57230856 Msa1111530:CDS
CAAAGGCTTTGGTTGAAGCT+GGG 0.462371 7_3:+57232678 Msa1111530:CDS
TCGCGTCATAATAGCTTCTC+TGG 0.462720 7_3:+57228549 Msa1111530:CDS
GTAATCATCAGTTCCTCAAA+TGG 0.463125 7_3:-57233603 None:intergenic
ATACTTGTGGACTATTTGCT+GGG 0.463295 7_3:-57232805 None:intergenic
AATTTGATATTCAATTAAAA+GGG 0.466038 7_3:-57227887 None:intergenic
ATCTTTAGAGCAATTTCCAT+TGG 0.466677 7_3:-57232206 None:intergenic
CATAGAATAAATTATCAGAT+TGG 0.468014 7_3:-57227863 None:intergenic
ATCAGGGAACTCTTCATGAC+TGG 0.468320 7_3:-57233531 None:intergenic
AAAAGCTCAATTGCTCCATT+GGG 0.468779 7_3:-57229427 None:intergenic
TGAGGTGGATATGGTGGATG+AGG 0.469565 7_3:-57228174 None:intergenic
CTTGATGTATCTGGCCAGTA+AGG 0.470050 7_3:-57228573 None:intergenic
TGGATCATTTCTTGCCATGA+AGG 0.470237 7_3:+57233571 Msa1111530:CDS
CATTGAAAACATCATCAGAT+TGG 0.470423 7_3:-57228001 None:intergenic
TGGCCAGAAGGTGTTCCAAC+AGG 0.470817 7_3:+57232284 Msa1111530:CDS
TATCATCAAGGAGTTGGAGC+AGG 0.472277 7_3:+57229449 Msa1111530:CDS
TTGTTCCGGTGCAGAATAAA+GGG 0.472943 7_3:+57228937 Msa1111530:CDS
TCGTTAATGCCAATAACATC+TGG 0.473650 7_3:-57231530 None:intergenic
GTCACATTCTACTAGCCATT+AGG 0.475240 7_3:+57233635 Msa1111530:three_prime_UTR
GTAATTGTGGATGCTGATGC+TGG 0.476245 7_3:+57230746 Msa1111530:CDS
TCAGCAGCGTTATGTGCAAC+AGG 0.478089 7_3:-57229227 None:intergenic
TACCCATCCGATTATACCTT+AGG 0.478110 7_3:+57229716 Msa1111530:CDS
CATTCGAATAACTCCTTCTC+CGG 0.480213 7_3:+57228813 Msa1111530:CDS
AAATCATGCCACGGCTCCCT+TGG 0.481375 7_3:-57231368 None:intergenic
TGATGATGCTTTACTCAGAC+TGG 0.485725 7_3:+57231499 Msa1111530:CDS
GGGATCATCGTACCCGAGTC+GGG 0.486719 7_3:+57228839 Msa1111530:CDS
TTATCACAACCCAACTTTCA+CGG 0.490127 7_3:+57230883 Msa1111530:CDS
ATCAAAGTTGCAACAGAAGA+AGG 0.490654 7_3:+57228776 Msa1111530:CDS
CATACCAACCTCATCATACC+TGG 0.490926 7_3:+57233101 Msa1111530:CDS
GGAGGCGATGCAGGAGGAGT+TGG 0.491479 7_3:-57228708 None:intergenic
CTACCTGAGTTCACCCGACT+CGG 0.493672 7_3:-57228852 None:intergenic
CTTTGTGTGGCAGCGCCTGT+TGG 0.494414 7_3:-57232299 None:intergenic
CGATGATCCCCAACCGGAGA+AGG 0.495917 7_3:-57228826 None:intergenic
GAAATGTAAGGATATGGATA+AGG 0.498383 7_3:-57228234 None:intergenic
GCCACTGAAATCGAAACATA+AGG 0.502267 7_3:-57229131 None:intergenic
CTGCTTTGTCCTCGTAGTGC+GGG 0.504171 7_3:+57230304 Msa1111530:CDS
AAGATCAGGACGGTCTTCAT+GGG 0.507243 7_3:-57228523 None:intergenic
AAAATAAATATGAAAATAGT+GGG 0.508893 7_3:-57227712 None:intergenic
GTTAAAAGCTTCAAAACCAC+AGG 0.510409 7_3:+57231451 Msa1111530:CDS
AAGGAATGTGAAGAAATGTA+AGG 0.511956 7_3:-57228246 None:intergenic
CTCAAAGGAAAATAAGTGGC+AGG 0.512719 7_3:-57229491 None:intergenic
GCACGTTCTTCCCACATACA+AGG 0.512951 7_3:-57231883 None:intergenic
TTGCCCAGGTATGATGAGGT+TGG 0.513082 7_3:-57233105 None:intergenic
AGGATAGGAAGAATAGTTGA+AGG 0.514453 7_3:-57228265 None:intergenic
AACTATACTATGTAGATCCA+TGG 0.516155 7_3:+57233302 Msa1111530:intron
AACAGAGGAAGAACGAAAGA+AGG 0.516292 7_3:-57227611 None:intergenic
CTCCCTGGAGGAACATGGTA+AGG 0.516338 7_3:-57228399 None:intergenic
GCACAAAGTTAGGTTGATAA+GGG 0.516916 7_3:+57229685 Msa1111530:CDS
GTTTGTAATGTCTTAAAGAG+AGG 0.517038 7_3:-57230845 None:intergenic
AAAGGTTGACCTGCAGCTGC+AGG 0.517666 7_3:-57228735 None:intergenic
GTTGTGGGTTCACAGCTCAT+TGG 0.518546 7_3:+57229278 Msa1111530:CDS
GGATCTTGAGGTGGATATGG+TGG 0.518757 7_3:-57228180 None:intergenic
GGATAAGAGGGTGGGGCTGA+GGG 0.519410 7_3:-57228378 None:intergenic
AAAATTGTAGCATTTGTTGG+TGG 0.520182 7_3:+57230782 Msa1111530:CDS
GATGATGATGATGGTGGTGG+TGG 0.520666 7_3:-57228294 None:intergenic
CCTGCAGCTGCAGGAGCTGG+AGG 0.520755 7_3:-57228726 None:intergenic
GATGTATGAGACAATTTCAA+AGG 0.520989 7_3:+57232661 Msa1111530:CDS
TGAGTATGAGAATGTGCATA+TGG 0.521631 7_3:-57228201 None:intergenic
CAACTCATGATGAGGAAACT+AGG 0.522767 7_3:+57230251 Msa1111530:CDS
AGTGTGAGCAATAAAATTGA+AGG 0.522806 7_3:+57229080 Msa1111530:CDS
ATGTAAGGATATGGATAAGG+AGG 0.525765 7_3:-57228231 None:intergenic
ACGCGGATAAGCAGACTGCT+TGG 0.526025 7_3:-57228643 None:intergenic
TCTTACTTGTCCAAGTGGAT+AGG 0.526119 7_3:-57233137 None:intergenic
TTATGACGCGAATGAAGATC+AGG 0.527391 7_3:-57228537 None:intergenic
ACATTAGGGAGGGTACCATC+TGG 0.527578 7_3:-57229554 None:intergenic
GACATAGCTGGGTCAAGCAA+AGG 0.528146 7_3:+57230332 Msa1111530:CDS
CCCTGTAGAAGTTGATCGAA+AGG 0.528365 7_3:+57233490 Msa1111530:CDS
CCTGTAGAAGTTGATCGAAA+GGG 0.528845 7_3:+57233491 Msa1111530:CDS
ACTAATTGATGAAGAGGAGC+AGG 0.530835 7_3:-57228354 None:intergenic
GGAGGGTATGCATAATCAAA+TGG 0.531024 7_3:-57228330 None:intergenic
TTCAACTTCTTTATCCCCTG+TGG 0.531598 7_3:-57231467 None:intergenic
GTAATGTCTTAAAGAGAGGA+TGG 0.533932 7_3:-57230841 None:intergenic
TCACCTAAGGTATAATCGGA+TGG 0.537404 7_3:-57229719 None:intergenic
GGAACACCTTCTGGCCACAT+TGG 0.540601 7_3:-57232278 None:intergenic
CTACGAAAATATCAGTGTGT+CGG 0.540996 7_3:+57232772 Msa1111530:CDS
AGAGCGTTGGTTAATGTTCG+CGG 0.541022 7_3:-57233041 None:intergenic
TCCAGTGGAACAAATATACT+CGG 0.541676 7_3:+57229313 Msa1111530:CDS
TAACTAACTTTGAGGAGCGC+TGG 0.541950 7_3:+57231429 Msa1111530:CDS
GGGGATCATCGTACCCGAGT+CGG 0.542242 7_3:+57228838 Msa1111530:CDS
CTAATGTGTTGCTTGATAGT+GGG 0.542740 7_3:+57229570 Msa1111530:CDS
GGACATGTTCCACAAAACAT+TGG 0.542969 7_3:+57229031 Msa1111530:CDS
TCATCAGAAAACTGTAATTG+TGG 0.543194 7_3:+57230733 Msa1111530:CDS
ATCCTTACCATGTTCCTCCA+GGG 0.543447 7_3:+57228397 Msa1111530:CDS
GATATATATTACAGGATGGT+CGG 0.543646 7_3:+57229658 Msa1111530:CDS
GATGAAGAGGAGCAGGTGGA+GGG 0.543844 7_3:-57228347 None:intergenic
TGCGGGAAAACGACATAGCT+GGG 0.543971 7_3:+57230321 Msa1111530:CDS
GATGGTGAGGAGTATCATAT+CGG 0.548650 7_3:-57230823 None:intergenic
GTAACACTGGTGGTTGTCCA+AGG 0.549106 7_3:+57231351 Msa1111530:CDS
AGGGACAGTGAGATTGCAAT+GGG 0.549322 7_3:+57233076 Msa1111530:CDS
AATCGAAACATAAGGATCAC+TGG 0.551158 7_3:-57229123 None:intergenic
CTCCATTGGGATGTACTGAA+TGG 0.551810 7_3:-57229414 None:intergenic
TGTTAAAGACAGTGATGTTG+TGG 0.552073 7_3:+57229262 Msa1111530:CDS
GGTGGACTTGATTTATGTGA+TGG 0.552481 7_3:+57230800 Msa1111530:CDS
TAGCATGGTGTGAGTGTGAA+AGG 0.552898 7_3:-57228446 None:intergenic
ACATAGCTGGGTCAAGCAAA+GGG 0.553117 7_3:+57230333 Msa1111530:CDS
AAGGACCCTTTATTCTGCAC+CGG 0.554333 7_3:-57228942 None:intergenic
GATACATCAAGTTCAATAGC+AGG 0.557019 7_3:+57228585 Msa1111530:CDS
AAAAGATTAAAGCAAATGAA+AGG 0.557809 7_3:+57232234 Msa1111530:CDS
ATAGAGAATCAATATTTCAT+CGG 0.560721 7_3:+57231971 Msa1111530:CDS
GGAGCTGGAGGCGATGCAGG+AGG 0.565340 7_3:-57228714 None:intergenic
GTGGGTGTTGAATGAAATGA+AGG 0.566557 7_3:-57227694 None:intergenic
TGTGAAAGGGAAGGTTGAGG+AGG 0.567953 7_3:-57228432 None:intergenic
GAGGGTACTAATTGATGAAG+AGG 0.568386 7_3:-57228360 None:intergenic
GGAGGACTATGATGACTCCC+TGG 0.568398 7_3:-57228414 None:intergenic
AATATTCTTACTTGTCCAAG+TGG 0.568981 7_3:-57233142 None:intergenic
CCTTTCGATCAACTTCTACA+GGG 0.569227 7_3:-57233490 None:intergenic
CCCAAAATACTTCTTGATGT+AGG 0.569267 7_3:-57229800 None:intergenic
GTCTTAAAGAGAGGATGGTG+AGG 0.569676 7_3:-57230836 None:intergenic
ATCATCAAGGAGTTGGAGCA+GGG 0.570242 7_3:+57229450 Msa1111530:CDS
TATTTGTAGAACCTTGTATG+TGG 0.570434 7_3:+57231872 Msa1111530:intron
CATGTTGTAATAAGCTAGCA+TGG 0.570668 7_3:-57228461 None:intergenic
GTTAAAGACAGTGATGTTGT+GGG 0.571136 7_3:+57229263 Msa1111530:CDS
TCAAGTTCAATAGCAGGTGG+TGG 0.572416 7_3:+57228591 Msa1111530:CDS
ATCAATTATAATACAAAACA+TGG 0.573319 7_3:-57227915 None:intergenic
CCAGTGGAACAAATATACTC+GGG 0.575208 7_3:+57229314 Msa1111530:CDS
CACCTAAGGTATAATCGGAT+GGG 0.575557 7_3:-57229718 None:intergenic
GAGGTGGATATGGTGGATGA+GGG 0.576761 7_3:-57228173 None:intergenic
AACGCTCTATGGAAGGAACA+AGG 0.577418 7_3:+57233056 Msa1111530:CDS
TTTCCTCAAAGGAAAATAAG+TGG 0.577725 7_3:-57229495 None:intergenic
ATCCTGTAATATATATCAAG+CGG 0.579988 7_3:-57229652 None:intergenic
ATTAACCAACGCTCTATGGA+AGG 0.580025 7_3:+57233049 Msa1111530:CDS
AAAGTGACATCCTATATCCA+TGG 0.582214 7_3:-57233319 None:intergenic
TGGTGGTGGTGATCTAGGAT+AGG 0.583146 7_3:-57228280 None:intergenic
GGAACATGGTAAGGATAAGA+GGG 0.583453 7_3:-57228390 None:intergenic
TACCTGAGTTCACCCGACTC+GGG 0.583696 7_3:-57228851 None:intergenic
GAGGAAGAACGAAAGAAGGA+AGG 0.584138 7_3:-57227607 None:intergenic
GATATGTTTGGAAAATTACC+TGG 0.584356 7_3:+57229056 Msa1111530:CDS
GCGATGCAGGAGGAGTTGGC+TGG 0.584525 7_3:-57228704 None:intergenic
AACAAGATTCGTTGAAACAG+AGG 0.585375 7_3:-57227626 None:intergenic
GGGTGAGGGTTAGGGTTAGG+GGG 0.585395 7_3:-57228153 None:intergenic
GTTAAGACATCATAAGCTGC+CGG 0.585615 7_3:-57231410 None:intergenic
CTGAAGACAAAGTCACAAGA+AGG 0.585714 7_3:+57229746 Msa1111530:CDS
ACAAAGGATTCTATTCTGGC+AGG 0.587511 7_3:+57232316 Msa1111530:CDS
CATGAAGAGTTCCCTGATGT+CGG 0.587918 7_3:+57233536 Msa1111530:CDS
GATATGGTGGATGAGGGTGA+GGG 0.588396 7_3:-57228167 None:intergenic
TGTCTTCAGAAGATCACCTA+AGG 0.588708 7_3:-57229732 None:intergenic
GTGGTTGTCCAAGGGAGCCG+TGG 0.589039 7_3:+57231360 Msa1111530:CDS
GTTAGGTTGATAAGGGATGC+CGG 0.590085 7_3:+57229692 Msa1111530:CDS
ATTTGTAGAACCTTGTATGT+GGG 0.590175 7_3:+57231873 Msa1111530:intron
CAAGATGCTCATGTTCCAGA+TGG 0.590512 7_3:+57229539 Msa1111530:CDS
GGAAATTGCTCTAAAGATTG+CGG 0.591374 7_3:+57232211 Msa1111530:CDS
ATACATAAAGGATGGTGTCA+TGG 0.594869 7_3:+57230228 Msa1111530:intron
TCCTTATGTTTCGATTTCAG+TGG 0.596517 7_3:+57229130 Msa1111530:CDS
CATGGTAAGGATAAGAGGGT+GGG 0.596576 7_3:-57228386 None:intergenic
ATGAAGGAGCAAAACTCTCA+AGG 0.596931 7_3:-57228961 None:intergenic
TGGAGTCAACATAAGGACCT+TGG 0.597166 7_3:+57232007 Msa1111530:CDS
TGATGATGAATATGTCATAG+TGG 0.597584 7_3:+57233015 Msa1111530:CDS
AATGGGAAGCCTTATAAGCA+AGG 0.597589 7_3:+57229374 Msa1111530:CDS
GTAATTCCAATGTGGCCAGA+AGG 0.597664 7_3:+57232272 Msa1111530:CDS
TCAGGGAACTCTTCATGACT+GGG 0.597740 7_3:-57233530 None:intergenic
TTGTTCCTTCCATAGAGCGT+TGG 0.598300 7_3:-57233054 None:intergenic
GAGCCTTGAATGCGTGCGAA+AGG 0.598551 7_3:+57233388 Msa1111530:CDS
AAGGGACAGTGAGATTGCAA+TGG 0.598628 7_3:+57233075 Msa1111530:CDS
TCCAAGAGAGGCGACTGGCA+AGG 0.601192 7_3:+57231750 Msa1111530:CDS
TACGAGGACAAAGCAGCACA+TGG 0.601413 7_3:-57230297 None:intergenic
TTGGGATGTACTGAATGGAT+AGG 0.601901 7_3:-57229409 None:intergenic
TTCGATTTCAGTGGCAAATG+CGG 0.602116 7_3:+57229139 Msa1111530:CDS
AGAAAACATTCCTATCCACT+TGG 0.604758 7_3:+57233127 Msa1111530:CDS
ATGATGTGACAGAGATGAGA+GGG 0.607750 7_3:+57233453 Msa1111530:CDS
ATCCATTCAGTACATCCCAA+TGG 0.609132 7_3:+57229412 Msa1111530:CDS
ATATATCTAAATTTCCATGA+AGG 0.611206 7_3:-57228977 None:intergenic
CTGTAGAAGTTGATCGAAAG+GGG 0.615216 7_3:+57233492 Msa1111530:CDS
GATGACTCCCTGGAGGAACA+TGG 0.616496 7_3:-57228404 None:intergenic
GCTGCTTTGTCCTCGTAGTG+CGG 0.616606 7_3:+57230303 Msa1111530:CDS
TGGTACTGTGGCAATTCCAG+TGG 0.619610 7_3:+57229298 Msa1111530:CDS
AAAGATCCAAGAGAGGCGAC+TGG 0.621060 7_3:+57231745 Msa1111530:CDS
TCATACCAGGGTAACACTGG+TGG 0.621160 7_3:+57231341 Msa1111530:intron
TTAGAATGCAAATCATGCCA+CGG 0.622390 7_3:-57231377 None:intergenic
GTGAGAATGATCCTGAATCA+TGG 0.622641 7_3:+57231564 Msa1111530:CDS
CATGCTAGCTTATTACAACA+TGG 0.623277 7_3:+57228462 Msa1111530:CDS
AGCATGGTGTGAGTGTGAAA+GGG 0.623293 7_3:-57228445 None:intergenic
TAACACTGGTGGTTGTCCAA+GGG 0.623919 7_3:+57231352 Msa1111530:CDS
GTAGAATTTGATGATGATGA+TGG 0.625754 7_3:-57228303 None:intergenic
ATGGTAAGGATAAGAGGGTG+GGG 0.626917 7_3:-57228385 None:intergenic
TACTTGTGGACTATTTGCTG+GGG 0.630713 7_3:-57232804 None:intergenic
TTTCTGTCTTGGTAATCGAG+AGG 0.631700 7_3:+57232739 Msa1111530:CDS
GAGTGTGAAAGGGAAGGTTG+AGG 0.632857 7_3:-57228435 None:intergenic
GATGATGAATATGTCATAGT+GGG 0.633290 7_3:+57233016 Msa1111530:CDS
TTTCTTGCCCAGGTATGATG+AGG 0.637433 7_3:-57233109 None:intergenic
ATAGTCTTGCACAGAGAATG+CGG 0.638534 7_3:-57232708 None:intergenic
TTCACAGCTCATTGGTACTG+TGG 0.638553 7_3:+57229286 Msa1111530:CDS
ACATGGTAAGGATAAGAGGG+TGG 0.641784 7_3:-57228387 None:intergenic
AATTGATGAAGAGGAGCAGG+TGG 0.643365 7_3:-57228351 None:intergenic
AGAAGTGTTGACTCCAAACA+GGG 0.644677 7_3:-57229199 None:intergenic
CAGTGGAACAAATATACTCG+GGG 0.645349 7_3:+57229315 Msa1111530:CDS
TGGCAAATGCGGTAATTGGG+AGG 0.646450 7_3:+57229150 Msa1111530:CDS
ATCAAGCAACACATTAGGGA+GGG 0.648180 7_3:-57229564 None:intergenic
CAACAGGCGCTGCCACACAA+AGG 0.650142 7_3:+57232300 Msa1111530:CDS
TTTGATGATGATGATGGTGG+TGG 0.651170 7_3:-57228297 None:intergenic
GAAGAGTTCCCTGATGTCGG+AGG 0.656981 7_3:+57233539 Msa1111530:CDS
GAATGTGCATATGGATCTTG+AGG 0.657738 7_3:-57228192 None:intergenic
GGCATTAACGACACTCCTAG+TGG 0.658548 7_3:+57231542 Msa1111530:CDS
TCAGGATCATTCTCACCACT+AGG 0.659227 7_3:-57231557 None:intergenic
AATGATGTGACAGAGATGAG+AGG 0.659486 7_3:+57233452 Msa1111530:CDS
ATACCAACCTCATCATACCT+GGG 0.662620 7_3:+57233102 Msa1111530:CDS
TGGTGTGAGTGTGAAAGGGA+AGG 0.663028 7_3:-57228441 None:intergenic
GAATTTGATGATGATGATGG+TGG 0.665136 7_3:-57228300 None:intergenic
AAAGTTGCAACAGAAGAAGG+AGG 0.665511 7_3:+57228779 Msa1111530:CDS
TTGATAATAATAATACTGAG+AGG 0.668653 7_3:-57228490 None:intergenic
AACAATACAAGCAAGAACAA+TGG 0.668722 7_3:-57227978 None:intergenic
ACTTGTGGACTATTTGCTGG+GGG 0.669008 7_3:-57232803 None:intergenic
TTAAAAGCTTCAAAACCACA+GGG 0.669595 7_3:+57231452 Msa1111530:CDS
ATATTACAGGATGGTCGGTG+TGG 0.670354 7_3:+57229663 Msa1111530:CDS
ACATGTTCCACAAAACATTG+GGG 0.671125 7_3:+57229033 Msa1111530:CDS
TTCATTAGATCATCCAAACG+CGG 0.671144 7_3:-57228660 None:intergenic
TATCAAGCAACACATTAGGG+AGG 0.672621 7_3:-57229565 None:intergenic
ACATCAAGTTCAATAGCAGG+TGG 0.675684 7_3:+57228588 Msa1111530:CDS
TGTGCATATGGATCTTGAGG+TGG 0.676569 7_3:-57228189 None:intergenic
GCTTGATATATATTACAGGA+TGG 0.676596 7_3:+57229654 Msa1111530:CDS
TTTATATAGTAATTCCAATG+TGG 0.676612 7_3:+57232264 Msa1111530:CDS
AGATCAGGACGGTCTTCATG+GGG 0.678398 7_3:-57228522 None:intergenic
CCAGAATAGAATCCTTTGTG+TGG 0.678944 7_3:-57232312 None:intergenic
ACGCTCTATGGAAGGAACAA+GGG 0.686823 7_3:+57233057 Msa1111530:CDS
TTTATGTGCATGGAAAGTGT+TGG 0.690605 7_3:+57229597 Msa1111530:CDS
GGTGGAGTATCACAAACTAG+TGG 0.691701 7_3:+57228609 Msa1111530:CDS
ATTTCCAAAAGATCCAAGAG+AGG 0.698012 7_3:+57231738 Msa1111530:CDS
CATACATACAGCATACGTGA+AGG 0.707734 7_3:+57231919 Msa1111530:CDS
GGAGTATCACAAACTAGTGG+TGG 0.712685 7_3:+57228612 Msa1111530:CDS
TGTCATGGCAACTCATGATG+AGG 0.718651 7_3:+57230243 Msa1111530:CDS
CATGTTCCACAAAACATTGG+GGG 0.723536 7_3:+57229034 Msa1111530:CDS
GGACTATGATGACTCCCTGG+AGG 0.724759 7_3:-57228411 None:intergenic
GACGCGAATGAAGATCAGGA+CGG 0.729478 7_3:-57228533 None:intergenic
AGTGGAACAAATATACTCGG+GGG 0.752635 7_3:+57229316 Msa1111530:CDS
CTCATGATGAGGAAACTAGG+CGG 0.773125 7_3:+57230254 Msa1111530:CDS
TAAAAGCTTCAAAACCACAG+GGG 0.798154 7_3:+57231453 Msa1111530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAATATGAAAATAGT+GGG - chr7_3:57227715-57227734 None:intergenic 10.0%
!! AATTTGATATTCAATTAAAA+GGG - chr7_3:57227890-57227909 None:intergenic 10.0%
!! AAATTTGATATTCAATTAAA+AGG - chr7_3:57227891-57227910 None:intergenic 10.0%
!!! AAAAATAGAAAATTTTGAAA+TGG + chr7_3:57233673-57233692 Msa1111530:three_prime_UTR 10.0%
!! GAAAATAAATATGAAAATAG+TGG - chr7_3:57227716-57227735 None:intergenic 15.0%
!! ATCAATTATAATACAAAACA+TGG - chr7_3:57227918-57227937 None:intergenic 15.0%
!!! ATAATTAAGAGTATACATTT+AGG + chr7_3:57230554-57230573 Msa1111530:intron 15.0%
!! TAGATAGTTTCTTTATAATA+GGG - chr7_3:57231205-57231224 None:intergenic 15.0%
!! ATAGATAGTTTCTTTATAAT+AGG - chr7_3:57231206-57231225 None:intergenic 15.0%
!! ATATCTATTGTATATGAAAT+AGG - chr7_3:57231606-57231625 None:intergenic 15.0%
!!! ATTATTGATTATGTTTACTT+TGG + chr7_3:57231673-57231692 Msa1111530:intron 15.0%
!!! AAGTTTTTGATATTCATATT+GGG - chr7_3:57232359-57232378 None:intergenic 15.0%
!!! ATTTTCATAAACTATCTTTT+TGG + chr7_3:57232484-57232503 Msa1111530:intron 15.0%
!! TGTATATTTAATACTTAATG+TGG + chr7_3:57233840-57233859 Msa1111530:three_prime_UTR 15.0%
!! GATAGAAATTGTACAATATA+TGG - chr7_3:57227754-57227773 None:intergenic 20.0%
!! CATAGAATAAATTATCAGAT+TGG - chr7_3:57227866-57227885 None:intergenic 20.0%
!! GTATTATAATTGATCATCAA+TGG + chr7_3:57227924-57227943 Msa1111530:five_prime_UTR 20.0%
!!! TTTTGATTCTTAAGACATAA+GGG - chr7_3:57228028-57228047 None:intergenic 20.0%
!!! ATTTTGATTCTTAAGACATA+AGG - chr7_3:57228029-57228048 None:intergenic 20.0%
!! ATTGAGAATATAGTGTTTAA+TGG + chr7_3:57228083-57228102 Msa1111530:exon 20.0%
!!! TGTTTAATGGATAATAACTA+TGG + chr7_3:57228096-57228115 Msa1111530:exon 20.0%
!!! TTGATAATAATAATACTGAG+AGG - chr7_3:57228493-57228512 None:intergenic 20.0%
!! ATATATCTAAATTTCCATGA+AGG - chr7_3:57228980-57228999 None:intergenic 20.0%
!! TTCATGGAAATTTAGATATA+TGG + chr7_3:57228979-57228998 Msa1111530:CDS 20.0%
!! TCATGGAAATTTAGATATAT+GGG + chr7_3:57228980-57228999 Msa1111530:CDS 20.0%
!! AAAAGAGATAAATAATGTAC+TGG - chr7_3:57229951-57229970 None:intergenic 20.0%
!! TCTAATTATGTGAAAATCTT+TGG + chr7_3:57230203-57230222 Msa1111530:intron 20.0%
!! TGCATTTAGATATACAATTT+CGG - chr7_3:57231239-57231258 None:intergenic 20.0%
!! TCTAAATGCAATTTAAATCA+TGG + chr7_3:57231249-57231268 Msa1111530:intron 20.0%
!! ATAGAGAATCAATATTTCAT+CGG + chr7_3:57231971-57231990 Msa1111530:CDS 20.0%
!! AAATTAAACATATTGGATAC+AGG - chr7_3:57232147-57232166 None:intergenic 20.0%
!! CTAGCATAAATTAAACATAT+TGG - chr7_3:57232154-57232173 None:intergenic 20.0%
!! AAAAGATTAAAGCAAATGAA+AGG + chr7_3:57232234-57232253 Msa1111530:CDS 20.0%
!! TTTATATAGTAATTCCAATG+TGG + chr7_3:57232264-57232283 Msa1111530:CDS 20.0%
!!! CAAGTTTTTGATATTCATAT+TGG - chr7_3:57232360-57232379 None:intergenic 20.0%
!! CAATATGAATATCAAAAACT+TGG + chr7_3:57232358-57232377 Msa1111530:intron 20.0%
!!! GATTTGATTTTTGAATTGTT+TGG + chr7_3:57232390-57232409 Msa1111530:intron 20.0%
!!! TTTTGGAAGAAAAATGAAAT+TGG + chr7_3:57232454-57232473 Msa1111530:intron 20.0%
!!! GATATTTTCGTAGATATTTA+TGG - chr7_3:57232765-57232784 None:intergenic 20.0%
!!! AATCATGATTTTGTTTTTCA+CGG + chr7_3:57232869-57232888 Msa1111530:intron 20.0%
!! ATGATATATGTTCATTCAAA+AGG + chr7_3:57232983-57233002 Msa1111530:CDS 20.0%
!!! AATCTTTAAGAATGATTTAG+AGG - chr7_3:57233174-57233193 None:intergenic 20.0%
!! CTAAATCATTCTTAAAGATT+TGG + chr7_3:57233174-57233193 Msa1111530:intron 20.0%
!! CTTGTATAATAATCAAGAAT+TGG - chr7_3:57233789-57233808 None:intergenic 20.0%
! ATTAGTACATTTCATCATCA+AGG + chr7_3:57228060-57228079 Msa1111530:five_prime_UTR 25.0%
! ATAACTATGGTTATCCATAT+AGG + chr7_3:57228109-57228128 Msa1111530:CDS 25.0%
! ATGATCTAATGAACAATGTT+AGG + chr7_3:57228670-57228689 Msa1111530:CDS 25.0%
! TACCCTATACTGAATAATAA+TGG + chr7_3:57229356-57229375 Msa1111530:CDS 25.0%
! ACCCTATACTGAATAATAAT+GGG + chr7_3:57229357-57229376 Msa1111530:CDS 25.0%
! TCCCATTATTATTCAGTATA+GGG - chr7_3:57229361-57229380 None:intergenic 25.0%
! TTCCCATTATTATTCAGTAT+AGG - chr7_3:57229362-57229381 None:intergenic 25.0%
! ATCCTGTAATATATATCAAG+CGG - chr7_3:57229655-57229674 None:intergenic 25.0%
! AACTTTGTTGATCTTATTGA+CGG + chr7_3:57229974-57229993 Msa1111530:intron 25.0%
!! CTTGAGACATTTTATAACTT+TGG + chr7_3:57230049-57230068 Msa1111530:intron 25.0%
! GATCTTACACAAAGTTATAA+GGG - chr7_3:57230113-57230132 None:intergenic 25.0%
! AGATCTTACACAAAGTTATA+AGG - chr7_3:57230114-57230133 None:intergenic 25.0%
! AAATCTTTGGCTATACATAA+AGG + chr7_3:57230216-57230235 Msa1111530:intron 25.0%
!!! AACAAATTTTGATGAAATGC+TGG + chr7_3:57230415-57230434 Msa1111530:intron 25.0%
! CCAAATATAAATGATATGCA+AGG - chr7_3:57230468-57230487 None:intergenic 25.0%
! CCTTGCATATCATTTATATT+TGG + chr7_3:57230465-57230484 Msa1111530:intron 25.0%
!!! GTCTAATATTTCTACAGTTT+TGG + chr7_3:57230647-57230666 Msa1111530:intron 25.0%
! AAGACAAAGAAATTCAATGT+TGG - chr7_3:57230682-57230701 None:intergenic 25.0%
! AGAAAAATTGTAGCATTTGT+TGG + chr7_3:57230779-57230798 Msa1111530:CDS 25.0%
! GACATTACAAACAATACATA+AGG + chr7_3:57230856-57230875 Msa1111530:CDS 25.0%
! ATGATTATTGCATTCTTATG+TGG + chr7_3:57231076-57231095 Msa1111530:intron 25.0%
! TGATTATTGCATTCTTATGT+GGG + chr7_3:57231077-57231096 Msa1111530:intron 25.0%
! ACTTGTATCAACAGAATAAT+TGG - chr7_3:57231315-57231334 None:intergenic 25.0%
!!! TACAAGTTATTTTTCATACC+AGG + chr7_3:57231328-57231347 Msa1111530:intron 25.0%
!!! ACAAGTTATTTTTCATACCA+GGG + chr7_3:57231329-57231348 Msa1111530:intron 25.0%
!!! GATTTGCATTCTAAAATTGA+TGG + chr7_3:57231386-57231405 Msa1111530:CDS 25.0%
!! AATTGATTCAAGTTCTGTTA+AGG + chr7_3:57231714-57231733 Msa1111530:CDS 25.0%
!! ATTGATTCAAGTTCTGTTAA+GGG + chr7_3:57231715-57231734 Msa1111530:CDS 25.0%
!!! ATGAGAAGGTTATTTGTTAT+TGG + chr7_3:57231848-57231867 Msa1111530:intron 25.0%
!!! TTTTAAAAGTATACGAGCTT+TGG + chr7_3:57232101-57232120 Msa1111530:intron 25.0%
!! ATTTATGCTAGATTCTGTTT+TGG + chr7_3:57232163-57232182 Msa1111530:intron 25.0%
! CGCTAATAATTTAATTCCAA+TGG + chr7_3:57232190-57232209 Msa1111530:CDS 25.0%
!!! TTTTTGGCATTACAAATGAT+TGG + chr7_3:57232500-57232519 Msa1111530:intron 25.0%
!! GCTTAACTGTTAAATTGTTT+TGG + chr7_3:57232527-57232546 Msa1111530:intron 25.0%
!!! TATTTGAACTTTTTCTGTCT+TGG + chr7_3:57232728-57232747 Msa1111530:CDS 25.0%
!! AGCGTAAAGAATATTTTCTA+GGG - chr7_3:57232841-57232860 None:intergenic 25.0%
! ATAATCTGACAGAAATTCTT+TGG + chr7_3:57233278-57233297 Msa1111530:intron 25.0%
! TAATCTGACAGAAATTCTTT+GGG + chr7_3:57233279-57233298 Msa1111530:intron 25.0%
! TAATTTACATCTCATCCTAA+TGG - chr7_3:57233653-57233672 None:intergenic 25.0%
!! GTTATTCTTTTTCCTTTCTT+AGG + chr7_3:57233742-57233761 Msa1111530:three_prime_UTR 25.0%
!!! ACAACAACAACACTTTTTAT+AGG - chr7_3:57233821-57233840 None:intergenic 25.0%
TTGTTCTTCTTCATCTCAAT+TGG + chr7_3:57227644-57227663 Msa1111530:five_prime_UTR 30.0%
TGTTCTTCTTCATCTCAATT+GGG + chr7_3:57227645-57227664 Msa1111530:five_prime_UTR 30.0%
ACAAGCAAGAATGATGTAAT+TGG - chr7_3:57227837-57227856 None:intergenic 30.0%
AACAATACAAGCAAGAACAA+TGG - chr7_3:57227981-57228000 None:intergenic 30.0%
CATTGAAAACATCATCAGAT+TGG - chr7_3:57228004-57228023 None:intergenic 30.0%
GAAATGTAAGGATATGGATA+AGG - chr7_3:57228237-57228256 None:intergenic 30.0%
TGTGAAGAAATGTAAGGATA+TGG - chr7_3:57228243-57228262 None:intergenic 30.0%
AAGGAATGTGAAGAAATGTA+AGG - chr7_3:57228249-57228268 None:intergenic 30.0%
!! GTAGAATTTGATGATGATGA+TGG - chr7_3:57228306-57228325 None:intergenic 30.0%
! ACCTTTTATGCATTCGATTT+CGG + chr7_3:57228752-57228771 Msa1111530:CDS 30.0%
!! GATTATTCTGGCTCATTTAA+CGG + chr7_3:57228888-57228907 Msa1111530:CDS 30.0%
GATATGTTTGGAAAATTACC+TGG + chr7_3:57229056-57229075 Msa1111530:CDS 30.0%
AGTGTGAGCAATAAAATTGA+AGG + chr7_3:57229080-57229099 Msa1111530:CDS 30.0%
! CAATTGAGCTTTTATCATCA+AGG + chr7_3:57229437-57229456 Msa1111530:CDS 30.0%
TTTCCTCAAAGGAAAATAAG+TGG - chr7_3:57229498-57229517 None:intergenic 30.0%
!! ACTTATTTTCCTTTGAGGAA+AGG + chr7_3:57229497-57229516 Msa1111530:CDS 30.0%
!! CTTATTTTCCTTTGAGGAAA+GGG + chr7_3:57229498-57229517 Msa1111530:CDS 30.0%
!! TTATTTTCCTTTGAGGAAAG+GGG + chr7_3:57229499-57229518 Msa1111530:CDS 30.0%
GCTTGATATATATTACAGGA+TGG + chr7_3:57229654-57229673 Msa1111530:CDS 30.0%
GATATATATTACAGGATGGT+CGG + chr7_3:57229658-57229677 Msa1111530:CDS 30.0%
AAGATCACCTAAGGTATAAT+CGG - chr7_3:57229726-57229745 None:intergenic 30.0%
!!! TCCTACATCAAGAAGTATTT+TGG + chr7_3:57229799-57229818 Msa1111530:CDS 30.0%
!!! CCTACATCAAGAAGTATTTT+GGG + chr7_3:57229800-57229819 Msa1111530:CDS 30.0%
AATTTCTTTGTCTTCTTGTC+AGG + chr7_3:57230688-57230707 Msa1111530:intron 30.0%
TCATCAGAAAACTGTAATTG+TGG + chr7_3:57230733-57230752 Msa1111530:CDS 30.0%
! AAAATTGTAGCATTTGTTGG+TGG + chr7_3:57230782-57230801 Msa1111530:CDS 30.0%
GTTTGTAATGTCTTAAAGAG+AGG - chr7_3:57230848-57230867 None:intergenic 30.0%
TAGTTTACCAGATAATCAGA+TGG - chr7_3:57230963-57230982 None:intergenic 30.0%
ATCTGATTATCTGGTAAACT+AGG + chr7_3:57230962-57230981 Msa1111530:intron 30.0%
GATTATTGCATTCTTATGTG+GGG + chr7_3:57231078-57231097 Msa1111530:intron 30.0%
ATTATTGCATTCTTATGTGG+GGG + chr7_3:57231079-57231098 Msa1111530:intron 30.0%
TTAGATATACAATTTCGGAC+AGG - chr7_3:57231234-57231253 None:intergenic 30.0%
TCATGGTTAAATCTGTATCA+CGG + chr7_3:57231266-57231285 Msa1111530:intron 30.0%
TGATGTCTTAACTAACTTTG+AGG + chr7_3:57231421-57231440 Msa1111530:CDS 30.0%
TTAAAAGCTTCAAAACCACA+GGG + chr7_3:57231452-57231471 Msa1111530:CDS 30.0%
GAAAGAATTCCAGATGTTAT+TGG + chr7_3:57231521-57231540 Msa1111530:CDS 30.0%
!! TTCGTTTTCGAGAAAAAAAG+AGG - chr7_3:57231653-57231672 None:intergenic 30.0%
TATTTGTAGAACCTTGTATG+TGG + chr7_3:57231872-57231891 Msa1111530:intron 30.0%
ATTTGTAGAACCTTGTATGT+GGG + chr7_3:57231873-57231892 Msa1111530:intron 30.0%
TTACAATTGGAGTCAACATA+AGG + chr7_3:57232000-57232019 Msa1111530:CDS 30.0%
!! AAAATAGGAGTATCATACCA+AGG - chr7_3:57232027-57232046 None:intergenic 30.0%
! CAGCTTTTGTATGCAAAAAT+AGG - chr7_3:57232042-57232061 None:intergenic 30.0%
!! ATCTTTAGAGCAATTTCCAT+TGG - chr7_3:57232209-57232228 None:intergenic 30.0%
TGAATATCAAAAACTTGGCA+AGG + chr7_3:57232363-57232382 Msa1111530:intron 30.0%
TCCAAAATTCACAGTAGTTT+GGG - chr7_3:57232441-57232460 None:intergenic 30.0%
TTCCAAAATTCACAGTAGTT+TGG - chr7_3:57232442-57232461 None:intergenic 30.0%
CAATAATGCACATGTTAATC+TGG + chr7_3:57232598-57232617 Msa1111530:intron 30.0%
GATGTATGAGACAATTTCAA+AGG + chr7_3:57232661-57232680 Msa1111530:CDS 30.0%
! GAGCGTAAAGAATATTTTCT+AGG - chr7_3:57232842-57232861 None:intergenic 30.0%
GGCATACAATCATTACTATT+GGG + chr7_3:57232890-57232909 Msa1111530:intron 30.0%
! TGATGATGAATATGTCATAG+TGG + chr7_3:57233015-57233034 Msa1111530:CDS 30.0%
GATGATGAATATGTCATAGT+GGG + chr7_3:57233016-57233035 Msa1111530:CDS 30.0%
AATATTCTTACTTGTCCAAG+TGG - chr7_3:57233145-57233164 None:intergenic 30.0%
AAAAATCAAAGAGATGCCAA+TGG - chr7_3:57233211-57233230 None:intergenic 30.0%
CAGATTATAGTACATGTTGA+TGG - chr7_3:57233266-57233285 None:intergenic 30.0%
AACTATACTATGTAGATCCA+TGG + chr7_3:57233302-57233321 Msa1111530:intron 30.0%
GGAAAAAGAATAACCTGTAA+AGG - chr7_3:57233736-57233755 None:intergenic 30.0%
TTGTGAGTTAATCCTAAGAA+AGG - chr7_3:57233757-57233776 None:intergenic 30.0%
!!! TGCACTTGTTTTGTAATTCA+TGG + chr7_3:57233865-57233884 Msa1111530:three_prime_UTR 30.0%
AACAAGATTCGTTGAAACAG+AGG - chr7_3:57227629-57227648 None:intergenic 35.0%
CAAGCAAGAACAATGGTAAT+TGG - chr7_3:57227974-57227993 None:intergenic 35.0%
TAAGGGTTTGGATACCTATA+TGG - chr7_3:57228126-57228145 None:intergenic 35.0%
TGAGTATGAGAATGTGCATA+TGG - chr7_3:57228204-57228223 None:intergenic 35.0%
ATGTAAGGATATGGATAAGG+AGG - chr7_3:57228234-57228253 None:intergenic 35.0%
AGGATAGGAAGAATAGTTGA+AGG - chr7_3:57228268-57228287 None:intergenic 35.0%
!! GAATTTGATGATGATGATGG+TGG - chr7_3:57228303-57228322 None:intergenic 35.0%
CATGTTGTAATAAGCTAGCA+TGG - chr7_3:57228464-57228483 None:intergenic 35.0%
! CATGCTAGCTTATTACAACA+TGG + chr7_3:57228462-57228481 Msa1111530:CDS 35.0%
GCTATTGAACTTGATGTATC+TGG - chr7_3:57228585-57228604 None:intergenic 35.0%
GATACATCAAGTTCAATAGC+AGG + chr7_3:57228585-57228604 Msa1111530:CDS 35.0%
TTCATTAGATCATCCAAACG+CGG - chr7_3:57228663-57228682 None:intergenic 35.0%
ACCGAAATCGAATGCATAAA+AGG - chr7_3:57228756-57228775 None:intergenic 35.0%
ATCAAAGTTGCAACAGAAGA+AGG + chr7_3:57228776-57228795 Msa1111530:CDS 35.0%
! CAGAAGAAGGAGGATTTTTA+TGG + chr7_3:57228789-57228808 Msa1111530:CDS 35.0%
AGCCAAGAATCTTCCAAATA+TGG + chr7_3:57229010-57229029 Msa1111530:CDS 35.0%
GTCCATATTTGGAAGATTCT+TGG - chr7_3:57229015-57229034 None:intergenic 35.0%
TTGTGGAACATGTCCATATT+TGG - chr7_3:57229026-57229045 None:intergenic 35.0%
GACATGTTCCACAAAACATT+GGG + chr7_3:57229032-57229051 Msa1111530:CDS 35.0%
ACATGTTCCACAAAACATTG+GGG + chr7_3:57229033-57229052 Msa1111530:CDS 35.0%
AAAACATTGGGGGATATGTT+TGG + chr7_3:57229044-57229063 Msa1111530:CDS 35.0%
! ATTTTATTGCTCACACTACC+AGG - chr7_3:57229077-57229096 None:intergenic 35.0%
AATCGAAACATAAGGATCAC+TGG - chr7_3:57229126-57229145 None:intergenic 35.0%
TCCTTATGTTTCGATTTCAG+TGG + chr7_3:57229130-57229149 Msa1111530:CDS 35.0%
TGTTAAAGACAGTGATGTTG+TGG + chr7_3:57229262-57229281 Msa1111530:CDS 35.0%
GTTAAAGACAGTGATGTTGT+GGG + chr7_3:57229263-57229282 Msa1111530:CDS 35.0%
TCCAGTGGAACAAATATACT+CGG + chr7_3:57229313-57229332 Msa1111530:CDS 35.0%
AAAAGCTCAATTGCTCCATT+GGG - chr7_3:57229430-57229449 None:intergenic 35.0%
TAAAAGCTCAATTGCTCCAT+TGG - chr7_3:57229431-57229450 None:intergenic 35.0%
! AGCTTTTATCATCAAGGAGT+TGG + chr7_3:57229443-57229462 Msa1111530:CDS 35.0%
!! TATTTTCCTTTGAGGAAAGG+GGG + chr7_3:57229500-57229519 Msa1111530:CDS 35.0%
CACTATCAAGCAACACATTA+GGG - chr7_3:57229571-57229590 None:intergenic 35.0%
!! CTAATGTGTTGCTTGATAGT+GGG + chr7_3:57229570-57229589 Msa1111530:CDS 35.0%
! TTTATGTGCATGGAAAGTGT+TGG + chr7_3:57229597-57229616 Msa1111530:CDS 35.0%
!! GCACAAAGTTAGGTTGATAA+GGG + chr7_3:57229685-57229704 Msa1111530:CDS 35.0%
!! TAAGAGTGCTTCTCCTTATT+TGG + chr7_3:57229771-57229790 Msa1111530:CDS 35.0%
!! AAGAGTGCTTCTCCTTATTT+GGG + chr7_3:57229772-57229791 Msa1111530:CDS 35.0%
ATGTAGGATCATCCCAAATA+AGG - chr7_3:57229787-57229806 None:intergenic 35.0%
CCCAAAATACTTCTTGATGT+AGG - chr7_3:57229803-57229822 None:intergenic 35.0%
TATGCTTTCATTTCTGTGCT+TGG + chr7_3:57229859-57229878 Msa1111530:intron 35.0%
CTTTGGCTATACATAAAGGA+TGG + chr7_3:57230220-57230239 Msa1111530:intron 35.0%
! ATACATAAAGGATGGTGTCA+TGG + chr7_3:57230228-57230247 Msa1111530:intron 35.0%
AAGCAAAGGGTTAGATTTGA+CGG + chr7_3:57230346-57230365 Msa1111530:intron 35.0%
GTAATGTCTTAAAGAGAGGA+TGG - chr7_3:57230844-57230863 None:intergenic 35.0%
TTATCACAACCCAACTTTCA+CGG + chr7_3:57230883-57230902 Msa1111530:CDS 35.0%
AAGAGATTACCGTGAAAGTT+GGG - chr7_3:57230895-57230914 None:intergenic 35.0%
TAAGAGATTACCGTGAAAGT+TGG - chr7_3:57230896-57230915 None:intergenic 35.0%
CAGTTATCCATCTGATTATC+TGG + chr7_3:57230953-57230972 Msa1111530:intron 35.0%
!! TCTGGTAAACTAGGTATTGA+TGG + chr7_3:57230971-57230990 Msa1111530:intron 35.0%
TTAGAATGCAAATCATGCCA+CGG - chr7_3:57231380-57231399 None:intergenic 35.0%
!! GCATTCTAAAATTGATGGTC+CGG + chr7_3:57231391-57231410 Msa1111530:CDS 35.0%
GTTAAAAGCTTCAAAACCAC+AGG + chr7_3:57231451-57231470 Msa1111530:CDS 35.0%
TAAAAGCTTCAAAACCACAG+GGG + chr7_3:57231453-57231472 Msa1111530:CDS 35.0%
TCGTTAATGCCAATAACATC+TGG - chr7_3:57231533-57231552 None:intergenic 35.0%
ATTTCCAAAAGATCCAAGAG+AGG + chr7_3:57231738-57231757 Msa1111530:CDS 35.0%
TAACCTTCTCATACACAAGT+TGG - chr7_3:57231840-57231859 None:intergenic 35.0%
TATACTTGACCATTTGCATC+TGG + chr7_3:57232064-57232083 Msa1111530:intron 35.0%
! AAAGTATACGAGCTTTGGTA+TGG + chr7_3:57232106-57232125 Msa1111530:intron 35.0%
ACATATTGGATACAGGCTTT+GGG - chr7_3:57232140-57232159 None:intergenic 35.0%
AACATATTGGATACAGGCTT+TGG - chr7_3:57232141-57232160 None:intergenic 35.0%
!! GGAAATTGCTCTAAAGATTG+CGG + chr7_3:57232211-57232230 Msa1111530:CDS 35.0%
! TCCCAAACTACTGTGAATTT+TGG + chr7_3:57232437-57232456 Msa1111530:intron 35.0%
TGGCATTACAAATGATTGGT+AGG + chr7_3:57232504-57232523 Msa1111530:intron 35.0%
GGCATTACAAATGATTGGTA+GGG + chr7_3:57232505-57232524 Msa1111530:intron 35.0%
TGAGACAATTTCAAAGGCTT+TGG + chr7_3:57232667-57232686 Msa1111530:CDS 35.0%
CTACGAAAATATCAGTGTGT+CGG + chr7_3:57232772-57232791 Msa1111530:CDS 35.0%
TACGAAAATATCAGTGTGTC+GGG + chr7_3:57232773-57232792 Msa1111530:CDS 35.0%
! ATACTTGTGGACTATTTGCT+GGG - chr7_3:57232808-57232827 None:intergenic 35.0%
CGGCATACAATCATTACTAT+TGG + chr7_3:57232889-57232908 Msa1111530:intron 35.0%
AGAAAACATTCCTATCCACT+TGG + chr7_3:57233127-57233146 Msa1111530:CDS 35.0%
TTTGGCCATATAGTTTCCAT+TGG + chr7_3:57233192-57233211 Msa1111530:intron 35.0%
AGATGCCAATGGAAACTATA+TGG - chr7_3:57233200-57233219 None:intergenic 35.0%
CTATGTAGATCCATGGATAT+AGG + chr7_3:57233309-57233328 Msa1111530:intron 35.0%
AAAGTGACATCCTATATCCA+TGG - chr7_3:57233322-57233341 None:intergenic 35.0%
! ATGGATATAGGATGTCACTT+TGG + chr7_3:57233321-57233340 Msa1111530:CDS 35.0%
!! TGGATATAGGATGTCACTTT+GGG + chr7_3:57233322-57233341 Msa1111530:CDS 35.0%
AATGGTAAGATTCTCCTTCA+TGG - chr7_3:57233588-57233607 None:intergenic 35.0%
AAGGAGAATCTTACCATTTG+AGG + chr7_3:57233590-57233609 Msa1111530:CDS 35.0%
GTAATCATCAGTTCCTCAAA+TGG - chr7_3:57233606-57233625 None:intergenic 35.0%
GTATAGTCAAACACCTTTAC+AGG + chr7_3:57233720-57233739 Msa1111530:three_prime_UTR 35.0%
AACAGAGGAAGAACGAAAGA+AGG - chr7_3:57227614-57227633 None:intergenic 40.0%
!! GTGGGTGTTGAATGAAATGA+AGG - chr7_3:57227697-57227716 None:intergenic 40.0%
GGTTAGGGGGATACATATAA+GGG - chr7_3:57228143-57228162 None:intergenic 40.0%
TATGGATCTTGAGGTGGATA+TGG - chr7_3:57228186-57228205 None:intergenic 40.0%
GAATGTGCATATGGATCTTG+AGG - chr7_3:57228195-57228214 None:intergenic 40.0%
!! TTTGATGATGATGATGGTGG+TGG - chr7_3:57228300-57228319 None:intergenic 40.0%
! GGAGGGTATGCATAATCAAA+TGG - chr7_3:57228333-57228352 None:intergenic 40.0%
ACTAATTGATGAAGAGGAGC+AGG - chr7_3:57228357-57228376 None:intergenic 40.0%
!! GAGGGTACTAATTGATGAAG+AGG - chr7_3:57228363-57228382 None:intergenic 40.0%
GGAACATGGTAAGGATAAGA+GGG - chr7_3:57228393-57228412 None:intergenic 40.0%
AGGAACATGGTAAGGATAAG+AGG - chr7_3:57228394-57228413 None:intergenic 40.0%
TTATGACGCGAATGAAGATC+AGG - chr7_3:57228540-57228559 None:intergenic 40.0%
ACATCAAGTTCAATAGCAGG+TGG + chr7_3:57228588-57228607 Msa1111530:CDS 40.0%
AAAGTTGCAACAGAAGAAGG+AGG + chr7_3:57228779-57228798 Msa1111530:CDS 40.0%
CATTCGAATAACTCCTTCTC+CGG + chr7_3:57228813-57228832 Msa1111530:CDS 40.0%
CTTTCGGTTTCGGATTATTC+TGG + chr7_3:57228876-57228895 Msa1111530:CDS 40.0%
ATTGTTCCGGTGCAGAATAA+AGG + chr7_3:57228936-57228955 Msa1111530:CDS 40.0%
TTGTTCCGGTGCAGAATAAA+GGG + chr7_3:57228937-57228956 Msa1111530:CDS 40.0%
ATGAAGGAGCAAAACTCTCA+AGG - chr7_3:57228964-57228983 None:intergenic 40.0%
! TTGAGAGTTTTGCTCCTTCA+TGG + chr7_3:57228963-57228982 Msa1111530:CDS 40.0%
GGACATGTTCCACAAAACAT+TGG + chr7_3:57229031-57229050 Msa1111530:CDS 40.0%
CATGTTCCACAAAACATTGG+GGG + chr7_3:57229034-57229053 Msa1111530:CDS 40.0%
! ACATATCCCCCAATGTTTTG+TGG - chr7_3:57229043-57229062 None:intergenic 40.0%
GCCACTGAAATCGAAACATA+AGG - chr7_3:57229134-57229153 None:intergenic 40.0%
TTCGATTTCAGTGGCAAATG+CGG + chr7_3:57229139-57229158 Msa1111530:CDS 40.0%
! GCAATTCTGAAAACCCTGTT+TGG + chr7_3:57229186-57229205 Msa1111530:CDS 40.0%
!! AGAAGTGTTGACTCCAAACA+GGG - chr7_3:57229202-57229221 None:intergenic 40.0%
!! TAGAAGTGTTGACTCCAAAC+AGG - chr7_3:57229203-57229222 None:intergenic 40.0%
CCAGTGGAACAAATATACTC+GGG + chr7_3:57229314-57229333 Msa1111530:CDS 40.0%
CAGTGGAACAAATATACTCG+GGG + chr7_3:57229315-57229334 Msa1111530:CDS 40.0%
AGTGGAACAAATATACTCGG+GGG + chr7_3:57229316-57229335 Msa1111530:CDS 40.0%
! AATGGGAAGCCTTATAAGCA+AGG + chr7_3:57229374-57229393 Msa1111530:CDS 40.0%
TTGGGATGTACTGAATGGAT+AGG - chr7_3:57229412-57229431 None:intergenic 40.0%
ATCCATTCAGTACATCCCAA+TGG + chr7_3:57229412-57229431 Msa1111530:CDS 40.0%
CTCAAAGGAAAATAAGTGGC+AGG - chr7_3:57229494-57229513 None:intergenic 40.0%
!! CTGCCACTTATTTTCCTTTG+AGG + chr7_3:57229492-57229511 Msa1111530:CDS 40.0%
ATCAAGCAACACATTAGGGA+GGG - chr7_3:57229567-57229586 None:intergenic 40.0%
TATCAAGCAACACATTAGGG+AGG - chr7_3:57229568-57229587 None:intergenic 40.0%
CCACTATCAAGCAACACATT+AGG - chr7_3:57229572-57229591 None:intergenic 40.0%
!! CCTAATGTGTTGCTTGATAG+TGG + chr7_3:57229569-57229588 Msa1111530:CDS 40.0%
! AGTGGGATGTTTTATGTGCA+TGG + chr7_3:57229587-57229606 Msa1111530:CDS 40.0%
CGCCGCTTGATATATATTAC+AGG + chr7_3:57229650-57229669 Msa1111530:CDS 40.0%
!! GGCACAAAGTTAGGTTGATA+AGG + chr7_3:57229684-57229703 Msa1111530:CDS 40.0%
TACCCATCCGATTATACCTT+AGG + chr7_3:57229716-57229735 Msa1111530:CDS 40.0%
CACCTAAGGTATAATCGGAT+GGG - chr7_3:57229721-57229740 None:intergenic 40.0%
TCACCTAAGGTATAATCGGA+TGG - chr7_3:57229722-57229741 None:intergenic 40.0%
TGTCTTCAGAAGATCACCTA+AGG - chr7_3:57229735-57229754 None:intergenic 40.0%
CTGAAGACAAAGTCACAAGA+AGG + chr7_3:57229746-57229765 Msa1111530:CDS 40.0%
ATTTCTGTGCTTGGAATTGC+TGG + chr7_3:57229868-57229887 Msa1111530:intron 40.0%
TTGGAATTGCTGGTAGGATT+TGG + chr7_3:57229878-57229897 Msa1111530:intron 40.0%
! AATTGCTGGTAGGATTTGGT+TGG + chr7_3:57229882-57229901 Msa1111530:intron 40.0%
TATCGAGCTCAGGTATAGTA+AGG - chr7_3:57230004-57230023 None:intergenic 40.0%
!! GTTTTCAAGATATCGAGCTC+AGG - chr7_3:57230014-57230033 None:intergenic 40.0%
TCTCAAGTCTAAACGTGAAC+AGG - chr7_3:57230036-57230055 None:intergenic 40.0%
CAACTCATGATGAGGAAACT+AGG + chr7_3:57230251-57230270 Msa1111530:CDS 40.0%
TTGTCTTCTTGTCAGGAAGT+TGG + chr7_3:57230695-57230714 Msa1111530:intron 40.0%
! GGTGGACTTGATTTATGTGA+TGG + chr7_3:57230800-57230819 Msa1111530:CDS 40.0%
!! GATGGTGAGGAGTATCATAT+CGG - chr7_3:57230826-57230845 None:intergenic 40.0%
! AGTCTTATCGTGCTACAATG+TGG - chr7_3:57230928-57230947 None:intergenic 40.0%
! GGTCTTCTTTTTCTGCTTAC+TGG - chr7_3:57231294-57231313 None:intergenic 40.0%
! TTTTCATACCAGGGTAACAC+TGG + chr7_3:57231338-57231357 Msa1111530:intron 40.0%
GTTAAGACATCATAAGCTGC+CGG - chr7_3:57231413-57231432 None:intergenic 40.0%
TTCAACTTCTTTATCCCCTG+TGG - chr7_3:57231470-57231489 None:intergenic 40.0%
! TGATGATGCTTTACTCAGAC+TGG + chr7_3:57231499-57231518 Msa1111530:CDS 40.0%
GTGAGAATGATCCTGAATCA+TGG + chr7_3:57231564-57231583 Msa1111530:CDS 40.0%
GAACCAACTTGTGTATGAGA+AGG + chr7_3:57231834-57231853 Msa1111530:intron 40.0%
CATACATACAGCATACGTGA+AGG + chr7_3:57231919-57231938 Msa1111530:CDS 40.0%
!! TCATCGGCTCTTCTTACAAT+TGG + chr7_3:57231987-57232006 Msa1111530:CDS 40.0%
AGTATAGCACCAGATGCAAA+TGG - chr7_3:57232076-57232095 None:intergenic 40.0%
!!! ATGCTAGATTCTGTTTTGGC+AGG + chr7_3:57232167-57232186 Msa1111530:intron 40.0%
CCAGAATAGAATCCTTTGTG+TGG - chr7_3:57232315-57232334 None:intergenic 40.0%
CCACACAAAGGATTCTATTC+TGG + chr7_3:57232312-57232331 Msa1111530:CDS 40.0%
ACAAAGGATTCTATTCTGGC+AGG + chr7_3:57232316-57232335 Msa1111530:CDS 40.0%
!! ATTGACCAAGTACTGAGTAG+CGG - chr7_3:57232582-57232601 None:intergenic 40.0%
! ATAGTCTTGCACAGAGAATG+CGG - chr7_3:57232711-57232730 None:intergenic 40.0%
! TTTCTGTCTTGGTAATCGAG+AGG + chr7_3:57232739-57232758 Msa1111530:CDS 40.0%
! TACTTGTGGACTATTTGCTG+GGG - chr7_3:57232807-57232826 None:intergenic 40.0%
! CATACTTGTGGACTATTTGC+TGG - chr7_3:57232809-57232828 None:intergenic 40.0%
TTACTATTGGGTGAATCGAC+TGG + chr7_3:57232902-57232921 Msa1111530:intron 40.0%
ATCGACTGGTAATTGTTGTG+TGG + chr7_3:57232916-57232935 Msa1111530:intron 40.0%
GACTATTTCGACTATTTGCC+TGG - chr7_3:57232955-57232974 None:intergenic 40.0%
GAACATTAACCAACGCTCTA+TGG + chr7_3:57233045-57233064 Msa1111530:CDS 40.0%
ATTAACCAACGCTCTATGGA+AGG + chr7_3:57233049-57233068 Msa1111530:CDS 40.0%
ATACCAACCTCATCATACCT+GGG + chr7_3:57233102-57233121 Msa1111530:CDS 40.0%
! ATAGGAATGTTTTCTTGCCC+AGG - chr7_3:57233122-57233141 None:intergenic 40.0%
TCTTACTTGTCCAAGTGGAT+AGG - chr7_3:57233140-57233159 None:intergenic 40.0%
GAGCAATTGGTGAAATGAAC+TGG + chr7_3:57233414-57233433 Msa1111530:CDS 40.0%
AATGATGTGACAGAGATGAG+AGG + chr7_3:57233452-57233471 Msa1111530:CDS 40.0%
ATGATGTGACAGAGATGAGA+GGG + chr7_3:57233453-57233472 Msa1111530:CDS 40.0%
CCTTTCGATCAACTTCTACA+GGG - chr7_3:57233493-57233512 None:intergenic 40.0%
! CCTGTAGAAGTTGATCGAAA+GGG + chr7_3:57233491-57233510 Msa1111530:CDS 40.0%
! CTGTAGAAGTTGATCGAAAG+GGG + chr7_3:57233492-57233511 Msa1111530:CDS 40.0%
! CAATTTTTCCTCCGACATCA+GGG - chr7_3:57233550-57233569 None:intergenic 40.0%
! ACAATTTTTCCTCCGACATC+AGG - chr7_3:57233551-57233570 None:intergenic 40.0%
GATGTCGGAGGAAAAATTGT+TGG + chr7_3:57233551-57233570 Msa1111530:CDS 40.0%
TGGATCATTTCTTGCCATGA+AGG + chr7_3:57233571-57233590 Msa1111530:CDS 40.0%
GTCACATTCTACTAGCCATT+AGG + chr7_3:57233635-57233654 Msa1111530:three_prime_UTR 40.0%
GAGGAAGAACGAAAGAAGGA+AGG - chr7_3:57227610-57227629 None:intergenic 45.0%
GGGGGATACATATAAGGGTT+TGG - chr7_3:57228138-57228157 None:intergenic 45.0%
GGGTTAGGGGGATACATATA+AGG - chr7_3:57228144-57228163 None:intergenic 45.0%
TGTGCATATGGATCTTGAGG+TGG - chr7_3:57228192-57228211 None:intergenic 45.0%
AATTGATGAAGAGGAGCAGG+TGG - chr7_3:57228354-57228373 None:intergenic 45.0%
ATGGTAAGGATAAGAGGGTG+GGG - chr7_3:57228388-57228407 None:intergenic 45.0%
CATGGTAAGGATAAGAGGGT+GGG - chr7_3:57228389-57228408 None:intergenic 45.0%
ACATGGTAAGGATAAGAGGG+TGG - chr7_3:57228390-57228409 None:intergenic 45.0%
TATCCTTACCATGTTCCTCC+AGG + chr7_3:57228396-57228415 Msa1111530:CDS 45.0%
ATCCTTACCATGTTCCTCCA+GGG + chr7_3:57228397-57228416 Msa1111530:CDS 45.0%
AGCATGGTGTGAGTGTGAAA+GGG - chr7_3:57228448-57228467 None:intergenic 45.0%
TAGCATGGTGTGAGTGTGAA+AGG - chr7_3:57228449-57228468 None:intergenic 45.0%
AAGATCAGGACGGTCTTCAT+GGG - chr7_3:57228526-57228545 None:intergenic 45.0%
TCGCGTCATAATAGCTTCTC+TGG + chr7_3:57228549-57228568 Msa1111530:CDS 45.0%
ATAGCTTCTCTGGTCCTTAC+TGG + chr7_3:57228559-57228578 Msa1111530:CDS 45.0%
CTTGATGTATCTGGCCAGTA+AGG - chr7_3:57228576-57228595 None:intergenic 45.0%
TCAAGTTCAATAGCAGGTGG+TGG + chr7_3:57228591-57228610 Msa1111530:CDS 45.0%
! GGTGGAGTATCACAAACTAG+TGG + chr7_3:57228609-57228628 Msa1111530:CDS 45.0%
! GGAGTATCACAAACTAGTGG+TGG + chr7_3:57228612-57228631 Msa1111530:CDS 45.0%
GAATAACTCCTTCTCCGGTT+GGG + chr7_3:57228818-57228837 Msa1111530:CDS 45.0%
AATAACTCCTTCTCCGGTTG+GGG + chr7_3:57228819-57228838 Msa1111530:CDS 45.0%
GGTGAACTCAGGTAGACTTT+CGG + chr7_3:57228860-57228879 Msa1111530:CDS 45.0%
CTCAGGTAGACTTTCGGTTT+CGG + chr7_3:57228866-57228885 Msa1111530:CDS 45.0%
TCAGAGCATGCAGATTGTTC+CGG + chr7_3:57228923-57228942 Msa1111530:CDS 45.0%
AAGGACCCTTTATTCTGCAC+CGG - chr7_3:57228945-57228964 None:intergenic 45.0%
TCAGTGGCAAATGCGGTAAT+TGG + chr7_3:57229146-57229165 Msa1111530:CDS 45.0%
CAGTGGCAAATGCGGTAATT+GGG + chr7_3:57229147-57229166 Msa1111530:CDS 45.0%
TTCACAGCTCATTGGTACTG+TGG + chr7_3:57229286-57229305 Msa1111530:CDS 45.0%
CCCGAGTATATTTGTTCCAC+TGG - chr7_3:57229317-57229336 None:intergenic 45.0%
AGTGCAGCACCTTGCTTATA+AGG - chr7_3:57229386-57229405 None:intergenic 45.0%
CTCCATTGGGATGTACTGAA+TGG - chr7_3:57229417-57229436 None:intergenic 45.0%
TATCATCAAGGAGTTGGAGC+AGG + chr7_3:57229449-57229468 Msa1111530:CDS 45.0%
ATCATCAAGGAGTTGGAGCA+GGG + chr7_3:57229450-57229469 Msa1111530:CDS 45.0%
GCAGGAACGCCAATATATTC+AGG - chr7_3:57229476-57229495 None:intergenic 45.0%
ACATTTCCCCCTTTCCTCAA+AGG - chr7_3:57229509-57229528 None:intergenic 45.0%
CAAGATGCTCATGTTCCAGA+TGG + chr7_3:57229539-57229558 Msa1111530:CDS 45.0%
ATATTACAGGATGGTCGGTG+TGG + chr7_3:57229663-57229682 Msa1111530:CDS 45.0%
!! GTTAGGTTGATAAGGGATGC+CGG + chr7_3:57229692-57229711 Msa1111530:CDS 45.0%
GGTATAATCGGATGGGTAAC+CGG - chr7_3:57229714-57229733 None:intergenic 45.0%
TGTCATGGCAACTCATGATG+AGG + chr7_3:57230243-57230262 Msa1111530:CDS 45.0%
CTCATGATGAGGAAACTAGG+CGG + chr7_3:57230254-57230273 Msa1111530:CDS 45.0%
ACATAGCTGGGTCAAGCAAA+GGG + chr7_3:57230333-57230352 Msa1111530:CDS 45.0%
GTAATTGTGGATGCTGATGC+TGG + chr7_3:57230746-57230765 Msa1111530:CDS 45.0%
GTCTTAAAGAGAGGATGGTG+AGG - chr7_3:57230839-57230858 None:intergenic 45.0%
!! CTACGTTTTAGTAGCTCCTG+AGG + chr7_3:57231031-57231050 Msa1111530:intron 45.0%
! CCTTATGCTTTGACTTCCTC+AGG - chr7_3:57231050-57231069 None:intergenic 45.0%
CCTGAGGAAGTCAAAGCATA+AGG + chr7_3:57231047-57231066 Msa1111530:intron 45.0%
TAACACTGGTGGTTGTCCAA+GGG + chr7_3:57231352-57231371 Msa1111530:CDS 45.0%
! TAACTAACTTTGAGGAGCGC+TGG + chr7_3:57231429-57231448 Msa1111530:CDS 45.0%
TCCTGAATCATGGCATGTTC+AGG + chr7_3:57231574-57231593 Msa1111530:CDS 45.0%
ACCTGAACATGCCATGATTC+AGG - chr7_3:57231578-57231597 None:intergenic 45.0%
TGGAGTCAACATAAGGACCT+TGG + chr7_3:57232007-57232026 Msa1111530:CDS 45.0%
GTAATTCCAATGTGGCCAGA+AGG + chr7_3:57232272-57232291 Msa1111530:CDS 45.0%
GGATTCTATTCTGGCAGGTA+CGG + chr7_3:57232321-57232340 Msa1111530:intron 45.0%
GGCTGCGTAATGTCAAAGAA+AGG + chr7_3:57232548-57232567 Msa1111530:intron 45.0%
! TCAAAGGCTTTGGTTGAAGC+TGG + chr7_3:57232677-57232696 Msa1111530:CDS 45.0%
! CAAAGGCTTTGGTTGAAGCT+GGG + chr7_3:57232678-57232697 Msa1111530:CDS 45.0%
! ACTTGTGGACTATTTGCTGG+GGG - chr7_3:57232806-57232825 None:intergenic 45.0%
GGGTGTTAGTGACATACTTG+TGG - chr7_3:57232821-57232840 None:intergenic 45.0%
GACTGGTAATTGTTGTGTGG+TGG + chr7_3:57232919-57232938 Msa1111530:intron 45.0%
!! AGAGCGTTGGTTAATGTTCG+CGG - chr7_3:57233044-57233063 None:intergenic 45.0%
TTGTTCCTTCCATAGAGCGT+TGG - chr7_3:57233057-57233076 None:intergenic 45.0%
AACGCTCTATGGAAGGAACA+AGG + chr7_3:57233056-57233075 Msa1111530:CDS 45.0%
ACGCTCTATGGAAGGAACAA+GGG + chr7_3:57233057-57233076 Msa1111530:CDS 45.0%
AAGGGACAGTGAGATTGCAA+TGG + chr7_3:57233075-57233094 Msa1111530:CDS 45.0%
AGGGACAGTGAGATTGCAAT+GGG + chr7_3:57233076-57233095 Msa1111530:CDS 45.0%
CATACCAACCTCATCATACC+TGG + chr7_3:57233101-57233120 Msa1111530:CDS 45.0%
TTTCTTGCCCAGGTATGATG+AGG - chr7_3:57233112-57233131 None:intergenic 45.0%
TCACTTTGGGCAGAACATAC+TGG + chr7_3:57233335-57233354 Msa1111530:CDS 45.0%
TAACCTTTCGCACGCATTCA+AGG - chr7_3:57233394-57233413 None:intergenic 45.0%
GTGCGAAAGGTTAGAGCAAT+TGG + chr7_3:57233401-57233420 Msa1111530:CDS 45.0%
! CCCTGTAGAAGTTGATCGAA+AGG + chr7_3:57233490-57233509 Msa1111530:CDS 45.0%
CCCTTTCGATCAACTTCTAC+AGG - chr7_3:57233494-57233513 None:intergenic 45.0%
TCAGGGAACTCTTCATGACT+GGG - chr7_3:57233533-57233552 None:intergenic 45.0%
ATCAGGGAACTCTTCATGAC+TGG - chr7_3:57233534-57233553 None:intergenic 45.0%
CATGAAGAGTTCCCTGATGT+CGG + chr7_3:57233536-57233555 Msa1111530:CDS 45.0%
!! GATATGGTGGATGAGGGTGA+GGG - chr7_3:57228170-57228189 None:intergenic 50.0%
!! GAGGTGGATATGGTGGATGA+GGG - chr7_3:57228176-57228195 None:intergenic 50.0%
!! TGAGGTGGATATGGTGGATG+AGG - chr7_3:57228177-57228196 None:intergenic 50.0%
GGATCTTGAGGTGGATATGG+TGG - chr7_3:57228183-57228202 None:intergenic 50.0%
!! TGGTGGTGGTGATCTAGGAT+AGG - chr7_3:57228283-57228302 None:intergenic 50.0%
!! GATGATGATGATGGTGGTGG+TGG - chr7_3:57228297-57228316 None:intergenic 50.0%
TGTGAAAGGGAAGGTTGAGG+AGG - chr7_3:57228435-57228454 None:intergenic 50.0%
GAGTGTGAAAGGGAAGGTTG+AGG - chr7_3:57228438-57228457 None:intergenic 50.0%
TGGTGTGAGTGTGAAAGGGA+AGG - chr7_3:57228444-57228463 None:intergenic 50.0%
AGATCAGGACGGTCTTCATG+GGG - chr7_3:57228525-57228544 None:intergenic 50.0%
GAAGATCAGGACGGTCTTCA+TGG - chr7_3:57228527-57228546 None:intergenic 50.0%
GACGCGAATGAAGATCAGGA+CGG - chr7_3:57228536-57228555 None:intergenic 50.0%
CGAATAACTCCTTCTCCGGT+TGG + chr7_3:57228817-57228836 Msa1111530:CDS 50.0%
TGGCAAATGCGGTAATTGGG+AGG + chr7_3:57229150-57229169 Msa1111530:CDS 50.0%
TCAGCAGCGTTATGTGCAAC+AGG - chr7_3:57229230-57229249 None:intergenic 50.0%
GTTGTGGGTTCACAGCTCAT+TGG + chr7_3:57229278-57229297 Msa1111530:CDS 50.0%
TGGTACTGTGGCAATTCCAG+TGG + chr7_3:57229298-57229317 Msa1111530:CDS 50.0%
ATACTCGGGGGCAATAGTTC+AGG + chr7_3:57229328-57229347 Msa1111530:CDS 50.0%
TACTCGGGGGCAATAGTTCA+GGG + chr7_3:57229329-57229348 Msa1111530:CDS 50.0%
GGAGCAGGGCCTGAATATAT+TGG + chr7_3:57229464-57229483 Msa1111530:CDS 50.0%
!! ACATTAGGGAGGGTACCATC+TGG - chr7_3:57229557-57229576 None:intergenic 50.0%
CTGTGCTTGGAATTGCTGGT+AGG + chr7_3:57229872-57229891 Msa1111530:intron 50.0%
TACGAGGACAAAGCAGCACA+TGG - chr7_3:57230300-57230319 None:intergenic 50.0%
TGCGGGAAAACGACATAGCT+GGG + chr7_3:57230321-57230340 Msa1111530:CDS 50.0%
GACATAGCTGGGTCAAGCAA+AGG + chr7_3:57230332-57230351 Msa1111530:CDS 50.0%
TCATACCAGGGTAACACTGG+TGG + chr7_3:57231341-57231360 Msa1111530:intron 50.0%
GTAACACTGGTGGTTGTCCA+AGG + chr7_3:57231351-57231370 Msa1111530:CDS 50.0%
! GTCGCCTCTCTTGGATCTTT+TGG - chr7_3:57231745-57231764 None:intergenic 50.0%
AAAGATCCAAGAGAGGCGAC+TGG + chr7_3:57231745-57231764 Msa1111530:CDS 50.0%
GCACGTTCTTCCCACATACA+AGG - chr7_3:57231886-57231905 None:intergenic 50.0%
TGCTACCGCTACTCAGTACT+TGG + chr7_3:57232574-57232593 Msa1111530:intron 50.0%
! TGTGGTGGTGCTTTCTTTCC+AGG + chr7_3:57232934-57232953 Msa1111530:intron 50.0%
TTGCCCAGGTATGATGAGGT+TGG - chr7_3:57233108-57233127 None:intergenic 50.0%
AGGGTGAGGGTTAGGGTTAG+GGG - chr7_3:57228157-57228176 None:intergenic 55.0%
GAGGGTGAGGGTTAGGGTTA+GGG - chr7_3:57228158-57228177 None:intergenic 55.0%
TGAGGGTGAGGGTTAGGGTT+AGG - chr7_3:57228159-57228178 None:intergenic 55.0%
GTGGATGAGGGTGAGGGTTA+GGG - chr7_3:57228164-57228183 None:intergenic 55.0%
!! GGATATGGTGGATGAGGGTG+AGG - chr7_3:57228171-57228190 None:intergenic 55.0%
!! GATGGTGGTGGTGGTGATCT+AGG - chr7_3:57228288-57228307 None:intergenic 55.0%
GATGAAGAGGAGCAGGTGGA+GGG - chr7_3:57228350-57228369 None:intergenic 55.0%
TGATGAAGAGGAGCAGGTGG+AGG - chr7_3:57228351-57228370 None:intergenic 55.0%
CTCCCTGGAGGAACATGGTA+AGG - chr7_3:57228402-57228421 None:intergenic 55.0%
GATGACTCCCTGGAGGAACA+TGG - chr7_3:57228407-57228426 None:intergenic 55.0%
GGACTATGATGACTCCCTGG+AGG - chr7_3:57228414-57228433 None:intergenic 55.0%
GGAGGACTATGATGACTCCC+TGG - chr7_3:57228417-57228436 None:intergenic 55.0%
ACGCGGATAAGCAGACTGCT+TGG - chr7_3:57228646-57228665 None:intergenic 55.0%
GCAGTCTGCTTATCCGCGTT+TGG + chr7_3:57228647-57228666 Msa1111530:CDS 55.0%
AAAGGTTGACCTGCAGCTGC+AGG - chr7_3:57228738-57228757 None:intergenic 55.0%
TACCTGAGTTCACCCGACTC+GGG - chr7_3:57228854-57228873 None:intergenic 55.0%
CTACCTGAGTTCACCCGACT+CGG - chr7_3:57228855-57228874 None:intergenic 55.0%
CAAGCGGCGAGCTTGACTTA+TGG - chr7_3:57229639-57229658 None:intergenic 55.0%
GGTCGGTGTGGCACAAAGTT+AGG + chr7_3:57229675-57229694 Msa1111530:CDS 55.0%
! GCTGCTTTGTCCTCGTAGTG+CGG + chr7_3:57230303-57230322 Msa1111530:CDS 55.0%
CTGCTTTGTCCTCGTAGTGC+GGG + chr7_3:57230304-57230323 Msa1111530:CDS 55.0%
!!! TGTCGTTTTCCCGCACTACG+AGG - chr7_3:57230316-57230335 None:intergenic 55.0%
GTGCGGGAAAACGACATAGC+TGG + chr7_3:57230320-57230339 Msa1111530:CDS 55.0%
GACAACCACCAGTGTTACCC+TGG - chr7_3:57231349-57231368 None:intergenic 55.0%
AAATCATGCCACGGCTCCCT+TGG - chr7_3:57231371-57231390 None:intergenic 55.0%
GGAACACCTTCTGGCCACAT+TGG - chr7_3:57232281-57232300 None:intergenic 55.0%
!! TGGCCAGAAGGTGTTCCAAC+AGG + chr7_3:57232284-57232303 Msa1111530:CDS 55.0%
! TGTGGACTATTTGCTGGGGG+AGG - chr7_3:57232803-57232822 None:intergenic 55.0%
GAGCCTTGAATGCGTGCGAA+AGG + chr7_3:57233388-57233407 Msa1111530:CDS 55.0%
GAAGAGTTCCCTGATGTCGG+AGG + chr7_3:57233539-57233558 Msa1111530:CDS 55.0%
GGGTGAGGGTTAGGGTTAGG+GGG - chr7_3:57228156-57228175 None:intergenic 60.0%
GGTGGATGAGGGTGAGGGTT+AGG - chr7_3:57228165-57228184 None:intergenic 60.0%
GGATAAGAGGGTGGGGCTGA+GGG - chr7_3:57228381-57228400 None:intergenic 60.0%
AGGATAAGAGGGTGGGGCTG+AGG - chr7_3:57228382-57228401 None:intergenic 60.0%
CGATGATCCCCAACCGGAGA+AGG - chr7_3:57228829-57228848 None:intergenic 60.0%
CGGGTACGATGATCCCCAAC+CGG - chr7_3:57228835-57228854 None:intergenic 60.0%
GGGGATCATCGTACCCGAGT+CGG + chr7_3:57228838-57228857 Msa1111530:CDS 60.0%
GGGATCATCGTACCCGAGTC+GGG + chr7_3:57228839-57228858 Msa1111530:CDS 60.0%
TACCCGAGTCGGGTGAACTC+AGG + chr7_3:57228849-57228868 Msa1111530:CDS 60.0%
TCCAAGAGAGGCGACTGGCA+AGG + chr7_3:57231750-57231769 Msa1111530:CDS 60.0%
ACCTTGCCAGTCGCCTCTCT+TGG - chr7_3:57231754-57231773 None:intergenic 60.0%
GCGCCTGTTGGAACACCTTC+TGG - chr7_3:57232290-57232309 None:intergenic 60.0%
CTTTGTGTGGCAGCGCCTGT+TGG - chr7_3:57232302-57232321 None:intergenic 60.0%
! CAACAGGCGCTGCCACACAA+AGG + chr7_3:57232300-57232319 Msa1111530:CDS 60.0%
CGCACGCATTCAAGGCTCTC+AGG - chr7_3:57233386-57233405 None:intergenic 60.0%
GCGATGCAGGAGGAGTTGGC+TGG - chr7_3:57228707-57228726 None:intergenic 65.0%
GGAGGCGATGCAGGAGGAGT+TGG - chr7_3:57228711-57228730 None:intergenic 65.0%
TGACCTGCAGCTGCAGGAGC+TGG - chr7_3:57228732-57228751 None:intergenic 65.0%
GTGGTTGTCCAAGGGAGCCG+TGG + chr7_3:57231360-57231379 Msa1111530:CDS 65.0%
GGAGCTGGAGGCGATGCAGG+AGG - chr7_3:57228717-57228736 None:intergenic 70.0%
GCAGGAGCTGGAGGCGATGC+AGG - chr7_3:57228720-57228739 None:intergenic 70.0%
CCTGCAGCTGCAGGAGCTGG+AGG - chr7_3:57228729-57228748 None:intergenic 70.0%
CCTCCAGCTCCTGCAGCTGC+AGG + chr7_3:57228726-57228745 Msa1111530:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 57227558 57233928 57227558 ID=Msa1111530;Name=Msa1111530
chr7_3 mRNA 57227558 57233928 57227558 ID=Msa1111530-mRNA-1;Parent=Msa1111530;Name=Msa1111530-mRNA-1;_AED=0.03;_eAED=0.03;_QI=524|1|1|1|0.9|0.81|11|318|1108
chr7_3 exon 57227558 57227800 57227558 ID=Msa1111530-mRNA-1:exon:12245;Parent=Msa1111530-mRNA-1
chr7_3 exon 57227821 57229832 57227821 ID=Msa1111530-mRNA-1:exon:12246;Parent=Msa1111530-mRNA-1
chr7_3 exon 57230238 57230354 57230238 ID=Msa1111530-mRNA-1:exon:12247;Parent=Msa1111530-mRNA-1
chr7_3 exon 57230710 57230904 57230710 ID=Msa1111530-mRNA-1:exon:12248;Parent=Msa1111530-mRNA-1
chr7_3 exon 57231350 57231595 57231350 ID=Msa1111530-mRNA-1:exon:12249;Parent=Msa1111530-mRNA-1
chr7_3 exon 57231703 57231771 57231703 ID=Msa1111530-mRNA-1:exon:12250;Parent=Msa1111530-mRNA-1
chr7_3 exon 57231881 57232028 57231881 ID=Msa1111530-mRNA-1:exon:12251;Parent=Msa1111530-mRNA-1
chr7_3 exon 57232189 57232337 57232189 ID=Msa1111530-mRNA-1:exon:12252;Parent=Msa1111530-mRNA-1
chr7_3 exon 57232644 57232823 57232644 ID=Msa1111530-mRNA-1:exon:12253;Parent=Msa1111530-mRNA-1
chr7_3 exon 57232956 57233153 57232956 ID=Msa1111530-mRNA-1:exon:12254;Parent=Msa1111530-mRNA-1
chr7_3 exon 57233317 57233928 57233317 ID=Msa1111530-mRNA-1:exon:12255;Parent=Msa1111530-mRNA-1
chr7_3 five_prime_UTR 57227558 57227800 57227558 ID=Msa1111530-mRNA-1:five_prime_utr;Parent=Msa1111530-mRNA-1
chr7_3 five_prime_UTR 57227821 57228101 57227821 ID=Msa1111530-mRNA-1:five_prime_utr;Parent=Msa1111530-mRNA-1
chr7_3 CDS 57228102 57229832 57228102 ID=Msa1111530-mRNA-1:cds;Parent=Msa1111530-mRNA-1
chr7_3 CDS 57230238 57230354 57230238 ID=Msa1111530-mRNA-1:cds;Parent=Msa1111530-mRNA-1
chr7_3 CDS 57230710 57230904 57230710 ID=Msa1111530-mRNA-1:cds;Parent=Msa1111530-mRNA-1
chr7_3 CDS 57231350 57231595 57231350 ID=Msa1111530-mRNA-1:cds;Parent=Msa1111530-mRNA-1
chr7_3 CDS 57231703 57231771 57231703 ID=Msa1111530-mRNA-1:cds;Parent=Msa1111530-mRNA-1
chr7_3 CDS 57231881 57232028 57231881 ID=Msa1111530-mRNA-1:cds;Parent=Msa1111530-mRNA-1
chr7_3 CDS 57232189 57232337 57232189 ID=Msa1111530-mRNA-1:cds;Parent=Msa1111530-mRNA-1
chr7_3 CDS 57232644 57232823 57232644 ID=Msa1111530-mRNA-1:cds;Parent=Msa1111530-mRNA-1
chr7_3 CDS 57232956 57233153 57232956 ID=Msa1111530-mRNA-1:cds;Parent=Msa1111530-mRNA-1
chr7_3 CDS 57233317 57233610 57233317 ID=Msa1111530-mRNA-1:cds;Parent=Msa1111530-mRNA-1
chr7_3 three_prime_UTR 57233611 57233928 57233611 ID=Msa1111530-mRNA-1:three_prime_utr;Parent=Msa1111530-mRNA-1
Gene Sequence

>Msa1111530

ATGGATAATAACTATGGTTATCCATATAGGTATCCAAACCCTTATATGTATCCCCCTAACCCTAACCCTCACCCTCATCCACCATATCCACCTCAAGATCCATATGCACATTCTCATACTCATCATGCTCCTCCTTATCCATATCCTTACATTTCTTCACATTCCTTCAACTATTCTTCCTATCCTAGATCACCACCACCACCATCATCATCATCAAATTCTACTGCACCATTTGATTATGCATACCCTCCACCTGCTCCTCTTCATCAATTAGTACCCTCAGCCCCACCCTCTTATCCTTACCATGTTCCTCCAGGGAGTCATCATAGTCCTCCTCAACCTTCCCTTTCACACTCACACCATGCTAGCTTATTACAACATGGATCATCCTCTCAGTATTATTATTATCAACAAAATACTCCCCATGAAGACCGTCCTGATCTTCATTCGCGTCATAATAGCTTCTCTGGTCCTTACTGGCCAGATACATCAAGTTCAATAGCAGGTGGTGGAGTATCACAAACTAGTGGTGGTGATAATTCCAAGCAGTCTGCTTATCCGCGTTTGGATGATCTAATGAACAATGTTAGGTTGTCTGATAACCAGCCAACTCCTCCTGCATCGCCTCCAGCTCCTGCAGCTGCAGGTCAACCTTTTATGCATTCGATTTCGGTATCAAAGTTGCAACAGAAGAAGGAGGATTTTTATGGACATTCGAATAACTCCTTCTCCGGTTGGGGATCATCGTACCCGAGTCGGGTGAACTCAGGTAGACTTTCGGTTTCGGATTATTCTGGCTCATTTAACGGATCAATGCATAGTCAGAGCATGCAGATTGTTCCGGTGCAGAATAAAGGGTCCTTGAGAGTTTTGCTCCTTCATGGAAATTTAGATATATGGGTTCATGAAGCCAAGAATCTTCCAAATATGGACATGTTCCACAAAACATTGGGGGATATGTTTGGAAAATTACCTGGTAGTGTGAGCAATAAAATTGAAGGAACAATGAATAAGAAGATTACCAGTGATCCTTATGTTTCGATTTCAGTGGCAAATGCGGTAATTGGGAGGACTTTTGTGATTAGCAATTCTGAAAACCCTGTTTGGAGTCAACACTTCTATGTTCCTGTTGCACATAACGCTGCTGAAGTGCACTTTTATGTTAAAGACAGTGATGTTGTGGGTTCACAGCTCATTGGTACTGTGGCAATTCCAGTGGAACAAATATACTCGGGGGCAATAGTTCAGGGAACTTACCCTATACTGAATAATAATGGGAAGCCTTATAAGCAAGGTGCTGCACTGAGCCTATCCATTCAGTACATCCCAATGGAGCAATTGAGCTTTTATCATCAAGGAGTTGGAGCAGGGCCTGAATATATTGGCGTTCCTGCCACTTATTTTCCTTTGAGGAAAGGGGGAAATGTTATTCTATATCAAGATGCTCATGTTCCAGATGGTACCCTCCCTAATGTGTTGCTTGATAGTGGGATGTTTTATGTGCATGGAAAGTGTTGGCATGACATATTTGATGCCATAAGTCAAGCTCGCCGCTTGATATATATTACAGGATGGTCGGTGTGGCACAAAGTTAGGTTGATAAGGGATGCCGGTTACCCATCCGATTATACCTTAGGTGATCTTCTGAAGACAAAGTCACAAGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGATGATCCTACATCAAGAAGTATTTTGGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTAGGCGGTTTTTCAAGCATTCATCAGTCCATGTGCTGCTTTGTCCTCGTAGTGCGGGAAAACGACATAGCTGGGTCAAGCAAAGGGAAGTTGGAACTATATATACACATCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATAACAGAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTATGTGATGGCCGATATGATACTCCTCACCATCCTCTCTTTAAGACATTACAAACAATACATAAGGATGATTATCACAACCCAACTTTCACGGGTAACACTGGTGGTTGTCCAAGGGAGCCGTGGCATGATTTGCATTCTAAAATTGATGGTCCGGCAGCTTATGATGTCTTAACTAACTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCACAGGGGATAAAGAAGTTGAAAATTTCATATGATGATGCTTTACTCAGACTGGAAAGAATTCCAGATGTTATTGGCATTAACGACACTCCTAGTGGTGAGAATGATCCTGAATCATGGCATGTTCAGATATTTCGCTCAATTGATTCAAGTTCTGTTAAGGGATTTCCAAAAGATCCAAGAGAGGCGACTGGCAAGAACCTTGTATGTGGGAAGAACGTGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCTATTCGTGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATCGGCTCTTCTTACAATTGGAGTCAACATAAGGACCTTGGCGCTAATAATTTAATTCCAATGGAAATTGCTCTAAAGATTGCGGAAAAGATTAAAGCAAATGAAAGGTTTGCAGTTTATATAGTAATTCCAATGTGGCCAGAAGGTGTTCCAACAGGCGCTGCCACACAAAGGATTCTATTCTGGCAGAACAAAACAATGCAAATGATGTATGAGACAATTTCAAAGGCTTTGGTTGAAGCTGGGCTTGAAGCCGCATTCTCTGTGCAAGACTATTTGAACTTTTTCTGTCTTGGTAATCGAGAGGCCATAAATATCTACGAAAATATCAGTGTGTCGGGAAATCCTCCCCCAGCAAATAGTCCACAAGCAAATAGTCGAAATAGTCGACGTTTTATGATATATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTCATAGTGGGCTCCGCGAACATTAACCAACGCTCTATGGAAGGAACAAGGGACAGTGAGATTGCAATGGGAGCATACCAACCTCATCATACCTGGGCAAGAAAACATTCCTATCCACTTGGACAAATCCATGGATATAGGATGTCACTTTGGGCAGAACATACTGGAACAATTGATGACTGCTTCTTGCAACCTGAGAGCCTTGAATGCGTGCGAAAGGTTAGAGCAATTGGTGAAATGAACTGGAAGCAATTTGCAGCAAATGATGTGACAGAGATGAGAGGGCATCTATTAAAATACCCTGTAGAAGTTGATCGAAAGGGGAAAGTCAGATCACTTCCCAGTCATGAAGAGTTCCCTGATGTCGGAGGAAAAATTGTTGGATCATTTCTTGCCATGAAGGAGAATCTTACCATTTGA
Protein sequence

>Msa1111530

MDNNYGYPYRYPNPYMYPPNPNPHPHPPYPPQDPYAHSHTHHAPPYPYPYISSHSFNYSSYPRSPPPPSSSSNSTAPFDYAYPPPAPLHQLVPSAPPSYPYHVPPGSHHSPPQPSLSHSHHASLLQHGSSSQYYYYQQNTPHEDRPDLHSRHNSFSGPYWPDTSSSIAGGGVSQTSGGDNSKQSAYPRLDDLMNNVRLSDNQPTPPASPPAPAAAGQPFMHSISVSKLQQKKEDFYGHSNNSFSGWGSSYPSRVNSGRLSVSDYSGSFNGSMHSQSMQIVPVQNKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGSVSNKIEGTMNKKITSDPYVSISVANAVIGRTFVISNSENPVWSQHFYVPVAHNAAEVHFYVKDSDVVGSQLIGTVAIPVEQIYSGAIVQGTYPILNNNGKPYKQGAALSLSIQYIPMEQLSFYHQGVGAGPEYIGVPATYFPLRKGGNVILYQDAHVPDGTLPNVLLDSGMFYVHGKCWHDIFDAISQARRLIYITGWSVWHKVRLIRDAGYPSDYTLGDLLKTKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVHVLLCPRSAGKRHSWVKQREVGTIYTHHQKTVIVDADAGNNRRKIVAFVGGLDLCDGRYDTPHHPLFKTLQTIHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPQGIKKLKISYDDALLRLERIPDVIGINDTPSGENDPESWHVQIFRSIDSSSVKGFPKDPREATGKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETISKALVEAGLEAAFSVQDYLNFFCLGNREAINIYENISVSGNPPPANSPQANSRNSRRFMIYVHSKGMIVDDEYVIVGSANINQRSMEGTRDSEIAMGAYQPHHTWARKHSYPLGQIHGYRMSLWAEHTGTIDDCFLQPESLECVRKVRAIGEMNWKQFAANDVTEMRGHLLKYPVEVDRKGKVRSLPSHEEFPDVGGKIVGSFLAMKENLTI*