AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1027540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1027540 MtrunA17_Chr7g0246481 97.404 1117 23 4 1 1114 1 1114 0.0 2235
Msa1027540 MtrunA17_Chr8g0350951 74.091 1073 228 11 49 1114 20 1049 0.0 1560
Msa1027540 MtrunA17_Chr5g0398161 68.831 847 256 5 273 1114 11 854 0.0 1230
Msa1027540 MtrunA17_Chr5g0398171 68.595 847 252 7 273 1114 11 848 0.0 1219
Msa1027540 MtrunA17_Chr3g0143471 52.852 859 361 10 296 1113 10 865 0.0 924
Msa1027540 MtrunA17_Chr8g0380631 54.162 853 356 10 288 1113 4 848 0.0 918
Msa1027540 MtrunA17_Chr5g0406161 52.164 855 351 10 299 1104 16 861 0.0 901
Msa1027540 MtrunA17_Chr2g0333021 46.537 823 395 15 297 1103 4 797 0.0 735
Msa1027540 MtrunA17_Chr4g0003411 46.667 825 386 17 299 1103 6 796 0.0 733
Msa1027540 MtrunA17_Chr3g0137791 45.738 833 405 18 298 1104 4 815 0.0 714
Msa1027540 MtrunA17_Chr3g0137821 44.458 830 416 18 298 1104 4 811 0.0 687
Msa1027540 MtrunA17_Chr2g0330431 41.299 770 374 24 351 1103 36 744 5.43e-178 540
Msa1027540 MtrunA17_Chr8g0341931 39.487 780 368 24 351 1103 39 741 8.41e-170 518
Msa1027540 MtrunA17_Chr5g0406151 61.905 63 24 0 624 686 16 78 2.15e-23 95.5
Msa1027540 MtrunA17_Chr1g0192401 32.450 302 132 15 755 1033 692 944 1.76e-22 104
Msa1027540 MtrunA17_Chr1g0192401 29.339 242 130 9 503 729 352 567 1.77e-18 91.7
Msa1027540 MtrunA17_Chr2g0295411 34.483 203 93 9 805 998 785 956 1.15e-18 92.4
Msa1027540 MtrunA17_Chr2g0295411 27.801 241 130 9 503 726 378 591 3.81e-15 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1027540 AT2G42010.1 75.633 948 199 9 172 1114 163 1083 0.0 1470
Msa1027540 AT2G42010.2 73.690 973 199 10 172 1114 163 1108 0.0 1456
Msa1027540 AT4G00240.1 76.014 863 199 5 254 1114 71 927 0.0 1360
Msa1027540 AT4G00240.2 73.349 863 187 5 254 1114 71 892 0.0 1297
Msa1027540 AT4G00240.3 78.581 775 163 3 342 1114 2 775 0.0 1285
Msa1027540 AT4G11850.1 70.476 840 234 5 284 1114 24 858 0.0 1243
Msa1027540 AT4G11840.1 69.514 843 241 6 284 1114 28 866 0.0 1239
Msa1027540 AT4G11830.2 67.299 844 258 7 284 1114 18 856 0.0 1195
Msa1027540 AT4G11840.2 67.260 843 230 7 284 1114 28 836 0.0 1184
Msa1027540 AT4G11830.1 67.835 799 243 4 326 1114 30 824 0.0 1156
Msa1027540 AT4G35790.2 52.771 866 359 10 288 1113 1 856 0.0 912
Msa1027540 AT4G35790.1 52.109 877 359 11 288 1113 1 867 0.0 904
Msa1027540 AT4G11830.4 68.174 619 191 5 284 898 18 634 0.0 884
Msa1027540 AT4G11830.3 69.218 601 179 5 284 880 18 616 0.0 871
Msa1027540 AT3G15730.1 45.828 827 396 15 298 1104 5 799 0.0 731
Msa1027540 AT1G52570.1 45.422 830 401 17 294 1103 1 798 0.0 716
Msa1027540 AT1G52570.3 45.422 830 401 17 294 1103 1 798 0.0 716
Msa1027540 AT1G52570.2 45.422 830 401 17 294 1103 1 798 0.0 716
Msa1027540 AT4G35790.3 51.906 682 286 8 290 932 3 681 0.0 704
Msa1027540 AT5G25370.1 44.915 826 416 16 297 1104 5 809 0.0 671
Msa1027540 AT5G25370.3 44.915 826 416 16 297 1104 5 809 0.0 671
Msa1027540 AT5G25370.2 44.915 826 416 16 297 1104 5 809 0.0 671
Msa1027540 AT5G25370.4 47.523 747 359 14 373 1104 6 734 0.0 659
Msa1027540 AT1G55180.2 38.710 775 388 26 351 1103 19 728 8.57e-159 489
Msa1027540 AT1G55180.1 38.710 775 388 26 351 1103 41 750 1.05e-158 490
Msa1027540 AT3G05630.1 28.336 607 276 25 518 1031 381 921 3.32e-37 152
Msa1027540 AT3G16785.6 35.468 203 97 9 802 998 756 930 6.61e-19 93.6
Msa1027540 AT3G16785.6 31.489 235 113 9 522 741 390 591 6.95e-16 83.6
Msa1027540 AT3G16785.5 35.468 203 97 9 802 998 756 930 6.61e-19 93.6
Msa1027540 AT3G16785.5 31.489 235 113 9 522 741 390 591 6.95e-16 83.6
Msa1027540 AT3G16785.1 35.468 203 97 9 802 998 756 930 7.28e-19 93.2
Msa1027540 AT3G16785.1 31.489 235 113 9 522 741 390 591 7.58e-16 83.6
Msa1027540 AT3G16785.3 35.468 203 97 9 802 998 756 930 8.20e-19 93.2
Msa1027540 AT3G16785.3 31.489 235 113 9 522 741 390 591 7.36e-16 83.6
Msa1027540 AT3G16785.2 35.468 203 97 9 802 998 756 930 8.20e-19 93.2
Msa1027540 AT3G16785.2 31.489 235 113 9 522 741 390 591 7.36e-16 83.6
Msa1027540 AT3G16785.4 35.468 203 97 9 802 998 756 930 8.45e-19 93.2
Msa1027540 AT3G16785.4 31.489 235 113 9 522 741 390 591 6.90e-16 83.6

Find 344 sgRNAs with CRISPR-Local

Find 488 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGAGTGCTTCTCCTTATT+TGG 0.103072 7_1:+59975133 Msa1027540:CDS
TCCTACATCAAGAAGTATTT+TGG 0.129376 7_1:+59975161 Msa1027540:CDS
TTCATGGAAATTTAGATATA+TGG 0.133175 7_1:+59974341 Msa1027540:CDS
GTCGCCTCTCTTGGATCTTT+TGG 0.168800 7_1:-59977115 None:intergenic
AGTGCAGCACCTTGCTTATA+AGG 0.223634 7_1:-59974745 None:intergenic
TCAGTGGCAAATGCGGTAAT+TGG 0.236146 7_1:+59974508 Msa1027540:CDS
TACCCTATACTGAATAATAA+TGG 0.248100 7_1:+59974718 Msa1027540:CDS
CTTTCGGTTTCGGATTATTC+TGG 0.249584 7_1:+59974238 Msa1027540:CDS
ATTGAGAATATAGTGTTTAA+TGG 0.256386 7_1:+59973427 Msa1027540:exon
TGAGGGTGAGGGTTAGGGTT+AGG 0.258737 7_1:-59973500 None:intergenic
AGGATAGGAAGAATAGTTTA+AGG 0.260174 7_1:-59973621 None:intergenic
GTCCATATTTGGAAGATTCT+TGG 0.264946 7_1:-59974374 None:intergenic
TCCCATTATTATTCAGTATA+GGG 0.268524 7_1:-59974720 None:intergenic
GAGGGTGAGGGTTAGGGTTA+GGG 0.269706 7_1:-59973499 None:intergenic
GAAAGAATTCCAGATGTTAT+TGG 0.278228 7_1:+59976894 Msa1027540:CDS
TGAGGGTGAGGGTGAGGGTT+AGG 0.281023 7_1:-59973506 None:intergenic
GTATAGTCAAACACCTTTAC+AGG 0.282626 7_1:+59979093 Msa1027540:three_prime_UTR
CAAGCAAGAACAATGGTAAT+TGG 0.287840 7_1:-59973312 None:intergenic
ACCGAAATCGAATGCATAAA+AGG 0.292897 7_1:-59974115 None:intergenic
CTCAGGTAGACTTTCGGTTT+CGG 0.294707 7_1:+59974228 Msa1027540:CDS
GCGCCTGTTGGAACACCTTC+TGG 0.300625 7_1:-59977660 None:intergenic
ATACTCAGGGGCAATAGTTC+AGG 0.304477 7_1:+59974690 Msa1027540:CDS
CATACTTGTGGACTATTTGC+TGG 0.310869 7_1:-59978179 None:intergenic
AGCCAAGAATCTTCCAAATA+TGG 0.313757 7_1:+59974372 Msa1027540:CDS
ACCTGAACATGCCATGATTC+AGG 0.319245 7_1:-59976948 None:intergenic
CCTAATGTGTTGCTTGATAG+TGG 0.323933 7_1:+59974931 Msa1027540:CDS
TGTGAAGAAATGTAAGGATA+TGG 0.325932 7_1:-59973596 None:intergenic
TTGTGGAACATGTCCATATT+TGG 0.326355 7_1:-59974385 None:intergenic
ATAGCTTCTCTGGTCCTTAC+TGG 0.327052 7_1:+59973921 Msa1027540:CDS
AAGAGTGCTTCTCCTTATTT+GGG 0.329101 7_1:+59975134 Msa1027540:CDS
GATTATTCTGGCTCATTTAA+CGG 0.332639 7_1:+59974250 Msa1027540:CDS
TGTTTAATGGATAATAACTA+TGG 0.337245 7_1:+59973440 Msa1027540:exon
ATTGATTCAAGTTCTGTTAA+GGG 0.338987 7_1:+59977088 Msa1027540:CDS
GAACATTAACCAACGCTCTA+TGG 0.341262 7_1:+59978418 Msa1027540:CDS
CCCTTTCGATCAACTTCTAC+AGG 0.342087 7_1:-59978864 None:intergenic
AGGGTGAGGGTTAGGGTTAG+GGG 0.344850 7_1:-59973498 None:intergenic
CTTGTATAATAATCAAGAAT+TGG 0.345619 7_1:-59979159 None:intergenic
ACCTTGCCAGTCGCCTCTCT+TGG 0.348515 7_1:-59977124 None:intergenic
CCACACAAAGGATTCTATTC+TGG 0.348578 7_1:+59977685 Msa1027540:CDS
ATGTAGGATCATCCCAAATA+AGG 0.349764 7_1:-59975146 None:intergenic
GGGGTAAGAGGGTGGGGCTG+AGG 0.351706 7_1:-59973741 None:intergenic
CGCCGCTTGATATATATTAC+AGG 0.353365 7_1:+59975012 Msa1027540:CDS
AGGAACATGGTAGGGGTAAG+AGG 0.356790 7_1:-59973753 None:intergenic
CCACTATCAAGCAACACATT+AGG 0.358018 7_1:-59974931 None:intergenic
TGAGACAATTTCAAAGGCTT+TGG 0.358156 7_1:+59978040 Msa1027540:CDS
AATTGATTCAAGTTCTGTTA+AGG 0.358342 7_1:+59977087 Msa1027540:CDS
CGCACGCATTCAAGGCTCTC+AGG 0.358697 7_1:-59978756 None:intergenic
TCATGGAAATTTAGATATAT+GGG 0.359304 7_1:+59974342 Msa1027540:CDS
TAAGGGTTTGGATACCTATA+TGG 0.359649 7_1:-59973467 None:intergenic
TAATTTACATCTCATCCTAA+TGG 0.361494 7_1:-59979023 None:intergenic
CATAGAAGAAATGATCAAAT+TGG 0.361682 7_1:-59973204 None:intergenic
TCATCGGCTCTTCTTACAAT+TGG 0.363852 7_1:+59977360 Msa1027540:CDS
GAAAATGAATATGAAAATAG+TGG 0.365996 7_1:-59973083 None:intergenic
TATGGATCTTGAGGTGGATA+TGG 0.372656 7_1:-59973539 None:intergenic
GCAATTCTGAAAACCCTGTT+TGG 0.375621 7_1:+59974548 Msa1027540:CDS
GATGGTGGTGGTGGTGATCT+AGG 0.376403 7_1:-59973641 None:intergenic
TTGTTCTTCTTCATCCCAAT+TGG 0.380771 7_1:+59973014 Msa1027540:five_prime_UTR
GATTTGCATTCTAAAATTGA+TGG 0.382709 7_1:+59976759 Msa1027540:CDS
GCAGGAGCTGGAGGCGATGC+AGG 0.382905 7_1:-59974079 None:intergenic
CACTATCAAGCAACACATTA+GGG 0.383119 7_1:-59974930 None:intergenic
TCCTGAATCATGGCATGTTC+AGG 0.384686 7_1:+59976947 Msa1027540:CDS
TCAAAGGCTTTGGTTGAAGC+TGG 0.388011 7_1:+59978050 Msa1027540:CDS
GGTATAATCGGATGGGTAAC+CGG 0.389842 7_1:-59975073 None:intergenic
GACATGTTCCACAAAACATT+GGG 0.390778 7_1:+59974394 Msa1027540:CDS
ATGATATATGTTCATTCAAA+AGG 0.392543 7_1:+59978356 Msa1027540:CDS
ACCCTATACTGAATAATAAT+GGG 0.395374 7_1:+59974719 Msa1027540:CDS
GGTCGGTGTGGCACAAAGTT+AGG 0.395497 7_1:+59975037 Msa1027540:CDS
TGACCTGCAGCTGCAGGAGC+TGG 0.397148 7_1:-59974091 None:intergenic
TAACCTTTCGCACGCATTCA+AGG 0.402473 7_1:-59978764 None:intergenic
CAAGCGGCGAGCTTGACTTA+TGG 0.403981 7_1:-59974998 None:intergenic
GATGTAATTCGGATATGAAT+TGG 0.405103 7_1:-59973163 None:intergenic
TGAGGATGAGGGTGAGGGTG+AGG 0.406715 7_1:-59973512 None:intergenic
GAGCAATTGGTGAAATGAAC+TGG 0.408220 7_1:+59978787 Msa1027540:CDS
GTGCGAAAGGTTAGAGCAAT+TGG 0.409242 7_1:+59978774 Msa1027540:CDS
TAGAAGTGTTGACTCCAAAC+AGG 0.409473 7_1:-59974562 None:intergenic
CGCTAATAATTTAATTCCAA+TGG 0.410249 7_1:+59977563 Msa1027540:CDS
ATGATCTAATGAACAATGTT+AGG 0.410783 7_1:+59974032 Msa1027540:CDS
AATGGTAAGATTCTCCTTCA+TGG 0.411414 7_1:-59978958 None:intergenic
GAGGGTGAGGGTGAGGGTTA+GGG 0.411943 7_1:-59973505 None:intergenic
GAATAACTCCTTCTCCGGTT+GGG 0.411996 7_1:+59974180 Msa1027540:CDS
AAGATCACCTAAGGTATAAT+CGG 0.412967 7_1:-59975085 None:intergenic
CAAGCAAGAATGATGTAATT+CGG 0.414182 7_1:-59973174 None:intergenic
AAATTTGATATTCAATGAAA+AGG 0.414508 7_1:-59973229 None:intergenic
TTCCCATTATTATTCAGTAT+AGG 0.416632 7_1:-59974721 None:intergenic
GGAGCAGGGCCTGAATATAT+TGG 0.417298 7_1:+59974826 Msa1027540:CDS
ATTGTTCCGGTGCAGAATAA+AGG 0.417796 7_1:+59974298 Msa1027540:CDS
CTATGTAGATCCATGGATAT+AGG 0.425881 7_1:+59978682 Msa1027540:intron
TACCCCTACCATGTTCCTCC+AGG 0.429377 7_1:+59973758 Msa1027540:CDS
GCAGGAACGCCAATATATTC+AGG 0.430118 7_1:-59974835 None:intergenic
TCACTTTGGGCAGAACATAC+TGG 0.430122 7_1:+59978708 Msa1027540:CDS
ATAACTATGGTTATCCATAT+AGG 0.433136 7_1:+59973453 Msa1027540:CDS
ACATGGTAGGGGTAAGAGGG+TGG 0.433482 7_1:-59973749 None:intergenic
TTGTGAGTTAATCCTAAGAA+AGG 0.434077 7_1:-59979127 None:intergenic
TGTTCTTCTTCATCCCAATT+GGG 0.435624 7_1:+59973015 Msa1027540:five_prime_UTR
TGTATATTTAATACTTAATG+TGG 0.436390 7_1:+59979219 Msa1027540:three_prime_UTR
GGATATGGTGGATGAGGATG+AGG 0.436522 7_1:-59973524 None:intergenic
CCTGAGTATATTTGTTCCAC+TGG 0.437419 7_1:-59974676 None:intergenic
AAGGAGAATCTTACCATTTG+AGG 0.439135 7_1:+59978963 Msa1027540:CDS
TTACAATTGGAGTCAACATA+AGG 0.439529 7_1:+59977373 Msa1027540:CDS
AATAACTCCTTCTCCGGTTG+GGG 0.441183 7_1:+59974181 Msa1027540:CDS
TGGATATAGGATGTCACTTT+GGG 0.441193 7_1:+59978695 Msa1027540:CDS
GGCACAAAGTTAGGTTGATA+AGG 0.443656 7_1:+59975046 Msa1027540:CDS
TAAAAGCTCAATTGCTCCAT+TGG 0.443891 7_1:-59974790 None:intergenic
GGTGAACTCAGGTAGACTTT+CGG 0.444029 7_1:+59974222 Msa1027540:CDS
AAGAGATTACCGTGAAAGTT+GGG 0.445566 7_1:-59976254 None:intergenic
TACGAAAATATCAGTGTGTC+GGG 0.446660 7_1:+59978146 Msa1027540:CDS
ATTAGTAAATTTCATCATCA+AGG 0.446814 7_1:+59973404 Msa1027540:five_prime_UTR
TGATGTCTTAACTAACTTTG+AGG 0.447629 7_1:+59976794 Msa1027540:CDS
TCAGAGCATGCAGATTGTTC+CGG 0.448698 7_1:+59974285 Msa1027540:CDS
TTGTCTTCTTGTCAGGAAGT+TGG 0.449853 7_1:+59976057 Msa1027540:intron
GCATTCTAAAATTGATGGTC+CGG 0.450215 7_1:+59976764 Msa1027540:CDS
GCTGTTGAACTTGATGTATC+TGG 0.453836 7_1:-59973944 None:intergenic
ATGGATATAGGATGTCACTT+TGG 0.453941 7_1:+59978694 Msa1027540:CDS
CAGTGGCAAATGCGGTAATT+GGG 0.454948 7_1:+59974509 Msa1027540:CDS
TGATGAAGAGGAGCAGGTGG+AGG 0.455283 7_1:-59973710 None:intergenic
TAAGAGATTACCGTGAAAGT+TGG 0.456097 7_1:-59976255 None:intergenic
CCTCCAGCTCCTGCAGCTGC+AGG 0.457583 7_1:+59974088 Msa1027540:CDS
CGAATAACTCCTTCTCCGGT+TGG 0.458011 7_1:+59974179 Msa1027540:CDS
AAGAACGAAGGAAGGAAGGA+AGG 0.460142 7_1:-59972973 None:intergenic
GTGCGGGAAAACGACATAGC+TGG 0.461330 7_1:+59975682 Msa1027540:CDS
GACATTACAAACAATACATA+AGG 0.461674 7_1:+59976218 Msa1027540:CDS
CAAAGGCTTTGGTTGAAGCT+GGG 0.462371 7_1:+59978051 Msa1027540:CDS
TCGCGTCATAATAGCTTCTC+TGG 0.462720 7_1:+59973911 Msa1027540:CDS
GTAATCATCAGTTCCTCAAA+TGG 0.463125 7_1:-59978976 None:intergenic
ATACTTGTGGACTATTTGCT+GGG 0.463295 7_1:-59978178 None:intergenic
ATCTTTAGAGCAATTTCCAT+TGG 0.466677 7_1:-59977579 None:intergenic
ATCAGGGAACTCTTCATGAC+TGG 0.468320 7_1:-59978904 None:intergenic
GGTGGATGAGGATGAGGGTG+AGG 0.468696 7_1:-59973518 None:intergenic
AAAAGCTCAATTGCTCCATT+GGG 0.468779 7_1:-59974789 None:intergenic
TCAGCAGCATTATGTGCAAC+AGG 0.468980 7_1:-59974589 None:intergenic
CTTGATGTATCTGGCCAGTA+AGG 0.470050 7_1:-59973935 None:intergenic
TGGATCATTTCTTGCCATGA+AGG 0.470237 7_1:+59978944 Msa1027540:CDS
TGGCCAGAAGGTGTTCCAAC+AGG 0.470817 7_1:+59977657 Msa1027540:CDS
TATCATCAAGGAGTTGGAGC+AGG 0.472277 7_1:+59974811 Msa1027540:CDS
TTGTTCCGGTGCAGAATAAA+GGG 0.472943 7_1:+59974299 Msa1027540:CDS
TCGTTAATGCCAATAACATC+TGG 0.473650 7_1:-59976903 None:intergenic
GTCACATTCTACTAGCCATT+AGG 0.475240 7_1:+59979008 Msa1027540:three_prime_UTR
GTAATTGTGGATGCTGATGC+TGG 0.476245 7_1:+59976108 Msa1027540:CDS
GTGGGTGTTGAATAAAATGA+AGG 0.476982 7_1:-59973064 None:intergenic
GGAACATGGTAGGGGTAAGA+GGG 0.477512 7_1:-59973752 None:intergenic
TACCCATCCGATTATACCTT+AGG 0.478110 7_1:+59975078 Msa1027540:CDS
AATTTGATATTCAATGAAAA+GGG 0.479353 7_1:-59973228 None:intergenic
TATAGTATATTTGATCATCA+AGG 0.480116 7_1:+59973264 Msa1027540:five_prime_UTR
CATTCGAATAACTCCTTCTC+CGG 0.480213 7_1:+59974175 Msa1027540:CDS
AAATCATGCCACGGCTCCCT+TGG 0.481375 7_1:-59976741 None:intergenic
TGATGATGCTTTACTCAGAC+TGG 0.485725 7_1:+59976872 Msa1027540:CDS
GGGATCATCGTACCCGAGTC+GGG 0.486719 7_1:+59974201 Msa1027540:CDS
TTATCACAACCCAACTTTCA+CGG 0.490127 7_1:+59976245 Msa1027540:CDS
ATCAAAGTTGCAACAGAAGA+AGG 0.490654 7_1:+59974138 Msa1027540:CDS
CATACCAACCTCATCATACC+TGG 0.490926 7_1:+59978474 Msa1027540:CDS
GGAGGCGATGCAGGAGGAGT+TGG 0.491479 7_1:-59974070 None:intergenic
CTACCTGAGTTCACCCGACT+CGG 0.493672 7_1:-59974214 None:intergenic
CTTTGTGTGGCAGCGCCTGT+TGG 0.494414 7_1:-59977672 None:intergenic
CGATGATCCCCAACCGGAGA+AGG 0.495917 7_1:-59974188 None:intergenic
ATGGTAGGGGTAAGAGGGTG+GGG 0.497982 7_1:-59973747 None:intergenic
GAAATGTAAGGATATGGATA+AGG 0.498383 7_1:-59973590 None:intergenic
GCCACTGAAATCGAAACATA+AGG 0.502267 7_1:-59974493 None:intergenic
CATTGAAAAGATCATCAGAT+TGG 0.503860 7_1:-59973342 None:intergenic
CTGCTTTGTCCTCGTAGTGC+GGG 0.504171 7_1:+59975666 Msa1027540:CDS
GATGATGATGATGGTGGTGG+TGG 0.505674 7_1:-59973650 None:intergenic
GTTAAAAGCTTCAAAACCAC+AGG 0.510409 7_1:+59976824 Msa1027540:CDS
AAGGAATGTGAAGAAATGTA+AGG 0.511956 7_1:-59973602 None:intergenic
CTCAAAGGAAAATAAGTGGC+AGG 0.512719 7_1:-59974853 None:intergenic
GCACGTTCTTCCCACATACA+AGG 0.512951 7_1:-59977256 None:intergenic
TTGCCCAGGTATGATGAGGT+TGG 0.513082 7_1:-59978478 None:intergenic
AACTATACTATGTAGATCCA+TGG 0.516155 7_1:+59978675 Msa1027540:intron
GCACAAAGTTAGGTTGATAA+GGG 0.516916 7_1:+59975047 Msa1027540:CDS
GTTTGTAATGTCTTAAAGAG+AGG 0.517038 7_1:-59976207 None:intergenic
GAGGATGAGGGTGAGGGTGA+GGG 0.517574 7_1:-59973511 None:intergenic
AAAGGTTGACCTGCAGCTGC+AGG 0.517666 7_1:-59974097 None:intergenic
GTTGTGGGTTCACAGCTCAT+TGG 0.518546 7_1:+59974640 Msa1027540:CDS
GGATCTTGAGGTGGATATGG+TGG 0.518757 7_1:-59973536 None:intergenic
CTCCCTGGAGGAACATGGTA+GGG 0.519087 7_1:-59973761 None:intergenic
AAAATTGTAGCATTTGTTGG+TGG 0.520182 7_1:+59976144 Msa1027540:CDS
CATGGTAGGGGTAAGAGGGT+GGG 0.520428 7_1:-59973748 None:intergenic
CCTGCAGCTGCAGGAGCTGG+AGG 0.520755 7_1:-59974088 None:intergenic
GATGTATGAGACAATTTCAA+AGG 0.520989 7_1:+59978034 Msa1027540:CDS
TGAGTATGAGAATGTGCATA+TGG 0.521631 7_1:-59973557 None:intergenic
CAACTCATGATGAGGAAACT+AGG 0.522767 7_1:+59975613 Msa1027540:CDS
AGTGTGAGCAATAAAATTGA+AGG 0.522806 7_1:+59974442 Msa1027540:CDS
ATGTAAGGATATGGATAAGG+AGG 0.525765 7_1:-59973587 None:intergenic
TCTTACTTGTCCAAGTGGAT+AGG 0.526119 7_1:-59978510 None:intergenic
GAGGAAGAACGAAGGAAGGA+AGG 0.526433 7_1:-59972977 None:intergenic
TACTCAGGGGCAATAGTTCA+GGG 0.527381 7_1:+59974691 Msa1027540:CDS
TTATGACGCGAATGAAGATC+AGG 0.527391 7_1:-59973899 None:intergenic
ACATTAGGGAGGGTACCATC+TGG 0.527578 7_1:-59974916 None:intergenic
GACATAGCTGGGTCAAGCAA+AGG 0.528146 7_1:+59975694 Msa1027540:CDS
CCCTGTAGAAGTTGATCGAA+AGG 0.528365 7_1:+59978863 Msa1027540:CDS
CCTGTAGAAGTTGATCGAAA+GGG 0.528845 7_1:+59978864 Msa1027540:CDS
ACTAATTGATGAAGAGGAGC+AGG 0.530835 7_1:-59973716 None:intergenic
GGAGGGTATGCATAATCAAA+TGG 0.531024 7_1:-59973692 None:intergenic
TTCAACTTCTTTATCCCCTG+TGG 0.531598 7_1:-59976840 None:intergenic
GGGTAAGAGGGTGGGGCTGA+GGG 0.533346 7_1:-59973740 None:intergenic
GTAATGTCTTAAAGAGAGGA+TGG 0.533932 7_1:-59976203 None:intergenic
GTGGATGAGGATGAGGGTGA+GGG 0.536228 7_1:-59973517 None:intergenic
TCACCTAAGGTATAATCGGA+TGG 0.537404 7_1:-59975081 None:intergenic
GGAACACCTTCTGGCCACAT+TGG 0.540601 7_1:-59977651 None:intergenic
CTACGAAAATATCAGTGTGT+CGG 0.540996 7_1:+59978145 Msa1027540:CDS
AGAGCGTTGGTTAATGTTCG+CGG 0.541022 7_1:-59978414 None:intergenic
TAACTAACTTTGAGGAGCGC+TGG 0.541950 7_1:+59976802 Msa1027540:CDS
GGGGATCATCGTACCCGAGT+CGG 0.542242 7_1:+59974200 Msa1027540:CDS
CTAATGTGTTGCTTGATAGT+GGG 0.542740 7_1:+59974932 Msa1027540:CDS
GGACATGTTCCACAAAACAT+TGG 0.542969 7_1:+59974393 Msa1027540:CDS
TCATCAGAAAACTGTAATTG+TGG 0.543194 7_1:+59976095 Msa1027540:CDS
GATATATATTACAGGATGGT+CGG 0.543646 7_1:+59975020 Msa1027540:CDS
GATGAAGAGGAGCAGGTGGA+GGG 0.543844 7_1:-59973709 None:intergenic
TGCGGGAAAACGACATAGCT+GGG 0.543971 7_1:+59975683 Msa1027540:CDS
GATGGTGAGGAGTATCATAT+CGG 0.548650 7_1:-59976185 None:intergenic
GTAACACTGGTGGTTGTCCA+AGG 0.549106 7_1:+59976724 Msa1027540:CDS
AGGGACAGTGAGATTGCAAT+GGG 0.549322 7_1:+59978449 Msa1027540:CDS
AATCGAAACATAAGGATCAC+TGG 0.551158 7_1:-59974485 None:intergenic
CTCCATTGGGATGTACTGAA+TGG 0.551810 7_1:-59974776 None:intergenic
TGTTAAAGACAGTGATGTTG+TGG 0.552073 7_1:+59974624 Msa1027540:CDS
GGTGGACTTGATTTATGTGA+TGG 0.552481 7_1:+59976162 Msa1027540:CDS
TAGCATGGTGTGAGTGTGAA+AGG 0.552898 7_1:-59973808 None:intergenic
ACATAGCTGGGTCAAGCAAA+GGG 0.553117 7_1:+59975695 Msa1027540:CDS
AAGGACCCTTTATTCTGCAC+CGG 0.554333 7_1:-59974304 None:intergenic
AAAAGATTAAAGCAAATGAA+AGG 0.557809 7_1:+59977607 Msa1027540:CDS
TGAGGTGGATATGGTGGATG+AGG 0.559059 7_1:-59973530 None:intergenic
ATAGAGAATCAATATTTCAT+CGG 0.560721 7_1:+59977344 Msa1027540:CDS
CCAGTGGAACAAATATACTC+AGG 0.563119 7_1:+59974676 Msa1027540:CDS
GGAGCTGGAGGCGATGCAGG+AGG 0.565340 7_1:-59974076 None:intergenic
GAGGGTACTAATTGATGAAG+AGG 0.568386 7_1:-59973722 None:intergenic
GGAGGACTATGATGACTCCC+TGG 0.568398 7_1:-59973776 None:intergenic
AATATTCTTACTTGTCCAAG+TGG 0.568981 7_1:-59978515 None:intergenic
CCTTTCGATCAACTTCTACA+GGG 0.569227 7_1:-59978863 None:intergenic
CCCAAAATACTTCTTGATGT+AGG 0.569267 7_1:-59975162 None:intergenic
GTCTTAAAGAGAGGATGGTG+AGG 0.569676 7_1:-59976198 None:intergenic
ACCCCTACCATGTTCCTCCA+GGG 0.569747 7_1:+59973759 Msa1027540:CDS
ATCATCAAGGAGTTGGAGCA+GGG 0.570242 7_1:+59974812 Msa1027540:CDS
TATTTGTAGAACCTTGTATG+TGG 0.570434 7_1:+59977245 Msa1027540:intron
CATGTTGTAATAAGCTAGCA+TGG 0.570668 7_1:-59973823 None:intergenic
GTTAAAGACAGTGATGTTGT+GGG 0.571136 7_1:+59974625 Msa1027540:CDS
CACCTAAGGTATAATCGGAT+GGG 0.575557 7_1:-59975080 None:intergenic
AACGCTCTATGGAAGGAACA+AGG 0.577418 7_1:+59978429 Msa1027540:CDS
TCAAGTTCAACAGCAGGTGG+TGG 0.577490 7_1:+59973953 Msa1027540:CDS
TTTCCTCAAAGGAAAATAAG+TGG 0.577725 7_1:-59974857 None:intergenic
GGGTGAGGGTTAGGGTTAGG+GGG 0.577959 7_1:-59973497 None:intergenic
ATCCTGTAATATATATCAAG+CGG 0.579988 7_1:-59975014 None:intergenic
ATTAACCAACGCTCTATGGA+AGG 0.580025 7_1:+59978422 Msa1027540:CDS
AAAGTGACATCCTATATCCA+TGG 0.582214 7_1:-59978692 None:intergenic
GATATGGTGGATGAGGATGA+GGG 0.582733 7_1:-59973523 None:intergenic
TGGTGGTGGTGATCTAGGAT+AGG 0.583146 7_1:-59973636 None:intergenic
TACCTGAGTTCACCCGACTC+GGG 0.583696 7_1:-59974213 None:intergenic
GATATGTTTGGAAAATTACC+TGG 0.584356 7_1:+59974418 Msa1027540:CDS
GCGATGCAGGAGGAGTTGGC+TGG 0.584525 7_1:-59974066 None:intergenic
AACAAGATTCGTTGAAACAG+AGG 0.585375 7_1:-59972996 None:intergenic
GTTAAGACATCATAAGCTGC+CGG 0.585615 7_1:-59976783 None:intergenic
CTGAAGACAAAGTCACAAGA+AGG 0.585714 7_1:+59975108 Msa1027540:CDS
ACAAAGGATTCTATTCTGGC+AGG 0.587511 7_1:+59977689 Msa1027540:CDS
CATGAAGAGTTCCCTGATGT+CGG 0.587918 7_1:+59978909 Msa1027540:CDS
CAGTGGAACAAATATACTCA+GGG 0.588322 7_1:+59974677 Msa1027540:CDS
TGTCTTCAGAAGATCACCTA+AGG 0.588708 7_1:-59975094 None:intergenic
GTGGTTGTCCAAGGGAGCCG+TGG 0.589039 7_1:+59976733 Msa1027540:CDS
GTTAGGTTGATAAGGGATGC+CGG 0.590085 7_1:+59975054 Msa1027540:CDS
ATTTGTAGAACCTTGTATGT+GGG 0.590175 7_1:+59977246 Msa1027540:intron
CAAGATGCTCATGTTCCAGA+TGG 0.590512 7_1:+59974901 Msa1027540:CDS
GGAAATTGCTCTAAAGATTG+CGG 0.591374 7_1:+59977584 Msa1027540:CDS
GATACATCAAGTTCAACAGC+AGG 0.592819 7_1:+59973947 Msa1027540:CDS
TCCCTGGAGGAACATGGTAG+GGG 0.594099 7_1:-59973760 None:intergenic
ATACATAAAGGATGGTGTCA+TGG 0.594869 7_1:+59975590 Msa1027540:intron
ACTCCCTGGAGGAACATGGT+AGG 0.596042 7_1:-59973762 None:intergenic
TCCTTATGTTTCGATTTCAG+TGG 0.596517 7_1:+59974492 Msa1027540:CDS
ATGAAGGAGCAAAACTCTCA+AGG 0.596931 7_1:-59974323 None:intergenic
TGGAGTCAACATAAGGACCT+TGG 0.597166 7_1:+59977380 Msa1027540:CDS
TGATGATGAATATGTCATAG+TGG 0.597584 7_1:+59978388 Msa1027540:CDS
AATGGGAAGCCTTATAAGCA+AGG 0.597589 7_1:+59974736 Msa1027540:CDS
GTAATTCCAATGTGGCCAGA+AGG 0.597664 7_1:+59977645 Msa1027540:CDS
TCAGGGAACTCTTCATGACT+GGG 0.597740 7_1:-59978903 None:intergenic
TTGTTCCTTCCATAGAGCGT+TGG 0.598300 7_1:-59978427 None:intergenic
GAGCCTTGAATGCGTGCGAA+AGG 0.598551 7_1:+59978761 Msa1027540:CDS
AAGGGACAGTGAGATTGCAA+TGG 0.598628 7_1:+59978448 Msa1027540:CDS
AACAGAGGAAGAACGAAGGA+AGG 0.601113 7_1:-59972981 None:intergenic
TCCAAGAGAGGCGACTGGCA+AGG 0.601192 7_1:+59977123 Msa1027540:CDS
TACGAGGACAAAGCAGCACA+TGG 0.601413 7_1:-59975659 None:intergenic
TTGGGATGTACTGAATGGAT+AGG 0.601901 7_1:-59974771 None:intergenic
TTCGATTTCAGTGGCAAATG+CGG 0.602116 7_1:+59974501 Msa1027540:CDS
TGGGTGTTGAATAAAATGAA+GGG 0.603486 7_1:-59973063 None:intergenic
AGAAAACATTCCTATCCACT+TGG 0.604758 7_1:+59978500 Msa1027540:CDS
ATGATGTGACAGAGATGAGA+GGG 0.607750 7_1:+59978826 Msa1027540:CDS
ATCCATTCAGTACATCCCAA+TGG 0.609132 7_1:+59974774 Msa1027540:CDS
ATATATCTAAATTTCCATGA+AGG 0.611206 7_1:-59974339 None:intergenic
CTGTAGAAGTTGATCGAAAG+GGG 0.615216 7_1:+59978865 Msa1027540:CDS
GCTGCTTTGTCCTCGTAGTG+CGG 0.616606 7_1:+59975665 Msa1027540:CDS
TGGTACTGTGGCAATTCCAG+TGG 0.619610 7_1:+59974660 Msa1027540:CDS
GATGACTCCCTGGAGGAACA+TGG 0.620147 7_1:-59973766 None:intergenic
AAAGATCCAAGAGAGGCGAC+TGG 0.621060 7_1:+59977118 Msa1027540:CDS
TCATACCAGGGTAACACTGG+TGG 0.621160 7_1:+59976714 Msa1027540:intron
TTAGAATGCAAATCATGCCA+CGG 0.622390 7_1:-59976750 None:intergenic
GTGAGAATGATCCTGAATCA+TGG 0.622641 7_1:+59976937 Msa1027540:CDS
CATGCTAGCTTATTACAACA+TGG 0.623277 7_1:+59973824 Msa1027540:CDS
AGCATGGTGTGAGTGTGAAA+GGG 0.623293 7_1:-59973807 None:intergenic
TAACACTGGTGGTTGTCCAA+GGG 0.623919 7_1:+59976725 Msa1027540:CDS
AAAATGAATATGAAAATAGT+GGG 0.625927 7_1:-59973082 None:intergenic
TACTTGTGGACTATTTGCTG+GGG 0.630713 7_1:-59978177 None:intergenic
TTTCTGTCTTGGTAATCGAG+AGG 0.631700 7_1:+59978112 Msa1027540:CDS
ATCAAATATACTATAAAACA+AGG 0.633178 7_1:-59973256 None:intergenic
GATGATGAATATGTCATAGT+GGG 0.633290 7_1:+59978389 Msa1027540:CDS
TTTCTTGCCCAGGTATGATG+AGG 0.637433 7_1:-59978482 None:intergenic
ATAGTCTTGCACAGAGAATG+CGG 0.638534 7_1:-59978081 None:intergenic
TTCACAGCTCATTGGTACTG+TGG 0.638553 7_1:+59974648 Msa1027540:CDS
AATTGATGAAGAGGAGCAGG+TGG 0.643365 7_1:-59973713 None:intergenic
AGAAGTGTTGACTCCAAACA+GGG 0.644677 7_1:-59974561 None:intergenic
TCCAAACGCGGATAAGCAGA+CGG 0.644857 7_1:-59974010 None:intergenic
TGGCAAATGCGGTAATTGGG+AGG 0.646450 7_1:+59974512 Msa1027540:CDS
ATCAAGCAACACATTAGGGA+GGG 0.648180 7_1:-59974926 None:intergenic
CAACAGGCGCTGCCACACAA+AGG 0.650142 7_1:+59977673 Msa1027540:CDS
GAAGAGTTCCCTGATGTCGG+AGG 0.656981 7_1:+59978912 Msa1027540:CDS
GAATGTGCATATGGATCTTG+AGG 0.657738 7_1:-59973548 None:intergenic
GGCATTAACGACACTCCTAG+TGG 0.658548 7_1:+59976915 Msa1027540:CDS
TCAGGATCATTCTCACCACT+AGG 0.659227 7_1:-59976930 None:intergenic
AATGATGTGACAGAGATGAG+AGG 0.659486 7_1:+59978825 Msa1027540:CDS
ATACCAACCTCATCATACCT+GGG 0.662620 7_1:+59978475 Msa1027540:CDS
AAAGTTGCAACAGAAGAAGG+AGG 0.665511 7_1:+59974141 Msa1027540:CDS
TTGATAATAATAATACTGAG+AGG 0.668653 7_1:-59973852 None:intergenic
AACAATACAAGCAAGAACAA+TGG 0.668722 7_1:-59973319 None:intergenic
ACATCAAGTTCAACAGCAGG+TGG 0.668769 7_1:+59973950 Msa1027540:CDS
ACTTGTGGACTATTTGCTGG+GGG 0.669008 7_1:-59978176 None:intergenic
TGTGAAAGGGAATGTTGAGG+AGG 0.669284 7_1:-59973794 None:intergenic
TTAAAAGCTTCAAAACCACA+GGG 0.669595 7_1:+59976825 Msa1027540:CDS
ATATTACAGGATGGTCGGTG+TGG 0.670354 7_1:+59975025 Msa1027540:CDS
ACATGTTCCACAAAACATTG+GGG 0.671125 7_1:+59974395 Msa1027540:CDS
TTCATTAGATCATCCAAACG+CGG 0.671144 7_1:-59974022 None:intergenic
TATCAAGCAACACATTAGGG+AGG 0.672621 7_1:-59974927 None:intergenic
AGCAGTTGACAACGTGTACG+AGG 0.672929 7_1:-59972928 None:intergenic
TGTGCATATGGATCTTGAGG+TGG 0.676569 7_1:-59973545 None:intergenic
GCTTGATATATATTACAGGA+TGG 0.676596 7_1:+59975016 Msa1027540:CDS
TTTATATAGTAATTCCAATG+TGG 0.676612 7_1:+59977637 Msa1027540:CDS
CCAGAATAGAATCCTTTGTG+TGG 0.678944 7_1:-59977685 None:intergenic
ACGCTCTATGGAAGGAACAA+GGG 0.686823 7_1:+59978430 Msa1027540:CDS
TTGAAACAGAGGAAGAACGA+AGG 0.690158 7_1:-59972985 None:intergenic
TTTATGTGCATGGAAAGTGT+TGG 0.690605 7_1:+59974959 Msa1027540:CDS
GGTGGAGTATCACAAACTAG+TGG 0.691701 7_1:+59973971 Msa1027540:CDS
ATTTCCAAAAGATCCAAGAG+AGG 0.698012 7_1:+59977111 Msa1027540:CDS
CATACATACAGCATACGTGA+AGG 0.707734 7_1:+59977292 Msa1027540:CDS
GGAGTATCACAAACTAGTGG+TGG 0.712685 7_1:+59973974 Msa1027540:CDS
TGTCATGGCAACTCATGATG+AGG 0.718651 7_1:+59975605 Msa1027540:CDS
CATGTTCCACAAAACATTGG+GGG 0.723536 7_1:+59974396 Msa1027540:CDS
GGACTATGATGACTCCCTGG+AGG 0.724759 7_1:-59973773 None:intergenic
GACGCGAATGAAGATCAGGA+CGG 0.729478 7_1:-59973895 None:intergenic
AGTGGAACAAATATACTCAG+GGG 0.754204 7_1:+59974678 Msa1027540:CDS
GAGTGTGAAAGGGAATGTTG+AGG 0.757045 7_1:-59973797 None:intergenic
CTCATGATGAGGAAACTAGG+CGG 0.773125 7_1:+59975616 Msa1027540:CDS
TAAAAGCTTCAAAACCACAG+GGG 0.798154 7_1:+59976826 Msa1027540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATAGAAAATTTTGAAA+TGG + chr7_1:59979046-59979065 Msa1027540:three_prime_UTR 10.0%
!! AAAATGAATATGAAAATAGT+GGG - chr7_1:59973085-59973104 None:intergenic 15.0%
!! AATTTGATATTCAATGAAAA+GGG - chr7_1:59973231-59973250 None:intergenic 15.0%
!! AAATTTGATATTCAATGAAA+AGG - chr7_1:59973232-59973251 None:intergenic 15.0%
!! ATCAAATATACTATAAAACA+AGG - chr7_1:59973259-59973278 None:intergenic 15.0%
!! TAGATAGTTTCTTTATAATA+GGG - chr7_1:59976578-59976597 None:intergenic 15.0%
!! ATAGATAGTTTCTTTATAAT+AGG - chr7_1:59976579-59976598 None:intergenic 15.0%
!! ATATCTATTGAATATGAAAT+AGG - chr7_1:59976979-59976998 None:intergenic 15.0%
!!! ATTATTGATTATGTTTACTT+TGG + chr7_1:59977046-59977065 Msa1027540:intron 15.0%
!!! AAGTTTTTGATATTCATATT+GGG - chr7_1:59977732-59977751 None:intergenic 15.0%
!!! ATTTTCATAAACTATCTTTT+TGG + chr7_1:59977857-59977876 Msa1027540:intron 15.0%
!! TGTATATTTAATACTTAATG+TGG + chr7_1:59979219-59979238 Msa1027540:three_prime_UTR 15.0%
!! GAAAATGAATATGAAAATAG+TGG - chr7_1:59973086-59973105 None:intergenic 20.0%
!! TATAGTATATTTGATCATCA+AGG + chr7_1:59973264-59973283 Msa1027540:five_prime_UTR 20.0%
!!! TTTTGATTCTTAAGACATAA+GGG - chr7_1:59973369-59973388 None:intergenic 20.0%
!!! ATTTTGATTCTTAAGACATA+AGG - chr7_1:59973370-59973389 None:intergenic 20.0%
!! ATTAGTAAATTTCATCATCA+AGG + chr7_1:59973404-59973423 Msa1027540:five_prime_UTR 20.0%
!! ATTGAGAATATAGTGTTTAA+TGG + chr7_1:59973427-59973446 Msa1027540:exon 20.0%
!!! TGTTTAATGGATAATAACTA+TGG + chr7_1:59973440-59973459 Msa1027540:exon 20.0%
!!! TTGATAATAATAATACTGAG+AGG - chr7_1:59973855-59973874 None:intergenic 20.0%
!! ATATATCTAAATTTCCATGA+AGG - chr7_1:59974342-59974361 None:intergenic 20.0%
!! TTCATGGAAATTTAGATATA+TGG + chr7_1:59974341-59974360 Msa1027540:CDS 20.0%
!! TCATGGAAATTTAGATATAT+GGG + chr7_1:59974342-59974361 Msa1027540:CDS 20.0%
!! AAAAGAGATAAATAATGTAC+TGG - chr7_1:59975313-59975332 None:intergenic 20.0%
!! TCTAATTATGTGAAAATCTT+TGG + chr7_1:59975565-59975584 Msa1027540:intron 20.0%
!!! ATAGTTAAGAGTATACATTT+AGG + chr7_1:59975916-59975935 Msa1027540:intron 20.0%
!! TGCATTTAGATATACAATTT+CGG - chr7_1:59976612-59976631 None:intergenic 20.0%
!! ATAGAGAATCAATATTTCAT+CGG + chr7_1:59977344-59977363 Msa1027540:CDS 20.0%
!! AAATTAAACATATTGGATAC+AGG - chr7_1:59977520-59977539 None:intergenic 20.0%
!! CTAGCATAAATTAAACATAT+TGG - chr7_1:59977527-59977546 None:intergenic 20.0%
!! AAAAGATTAAAGCAAATGAA+AGG + chr7_1:59977607-59977626 Msa1027540:CDS 20.0%
!! TTTATATAGTAATTCCAATG+TGG + chr7_1:59977637-59977656 Msa1027540:CDS 20.0%
!!! CAAGTTTTTGATATTCATAT+TGG - chr7_1:59977733-59977752 None:intergenic 20.0%
!! CAATATGAATATCAAAAACT+TGG + chr7_1:59977731-59977750 Msa1027540:intron 20.0%
!!! GATTTGATTTTTGAATTGTT+TGG + chr7_1:59977763-59977782 Msa1027540:intron 20.0%
!!! TTTTGGAAGAAAAATGAAAT+TGG + chr7_1:59977827-59977846 Msa1027540:intron 20.0%
!!! GATATTTTCGTAGATATTTA+TGG - chr7_1:59978138-59978157 None:intergenic 20.0%
!!! AATCATGATTTTGTTTTTCA+CGG + chr7_1:59978242-59978261 Msa1027540:intron 20.0%
!! ATGATATATGTTCATTCAAA+AGG + chr7_1:59978356-59978375 Msa1027540:CDS 20.0%
!!! AATCTTTAAGAATGATTTAG+AGG - chr7_1:59978547-59978566 None:intergenic 20.0%
!! CTAAATCATTCTTAAAGATT+TGG + chr7_1:59978547-59978566 Msa1027540:intron 20.0%
!! CTTGTATAATAATCAAGAAT+TGG - chr7_1:59979162-59979181 None:intergenic 20.0%
!! AATGAGAATTTTACCCAATT+GGG - chr7_1:59973031-59973050 None:intergenic 25.0%
!! AAATGAGAATTTTACCCAAT+TGG - chr7_1:59973032-59973051 None:intergenic 25.0%
! CATAGAAGAAATGATCAAAT+TGG - chr7_1:59973207-59973226 None:intergenic 25.0%
! ATAACTATGGTTATCCATAT+AGG + chr7_1:59973453-59973472 Msa1027540:CDS 25.0%
! ATGATCTAATGAACAATGTT+AGG + chr7_1:59974032-59974051 Msa1027540:CDS 25.0%
! TACCCTATACTGAATAATAA+TGG + chr7_1:59974718-59974737 Msa1027540:CDS 25.0%
! ACCCTATACTGAATAATAAT+GGG + chr7_1:59974719-59974738 Msa1027540:CDS 25.0%
! TCCCATTATTATTCAGTATA+GGG - chr7_1:59974723-59974742 None:intergenic 25.0%
! TTCCCATTATTATTCAGTAT+AGG - chr7_1:59974724-59974743 None:intergenic 25.0%
! ATCCTGTAATATATATCAAG+CGG - chr7_1:59975017-59975036 None:intergenic 25.0%
! AACTTTGTTGATCTTATTGA+CGG + chr7_1:59975336-59975355 Msa1027540:intron 25.0%
!! CTTGAGACATTTTATAACTT+TGG + chr7_1:59975411-59975430 Msa1027540:intron 25.0%
! GATCTTACACAAAGTTATAA+GGG - chr7_1:59975475-59975494 None:intergenic 25.0%
! AGATCTTACACAAAGTTATA+AGG - chr7_1:59975476-59975495 None:intergenic 25.0%
! AAATCTTTGGCTATACATAA+AGG + chr7_1:59975578-59975597 Msa1027540:intron 25.0%
!!! AACAAATTTTGATGAAATGC+TGG + chr7_1:59975777-59975796 Msa1027540:intron 25.0%
! CCAAATATAAATGATATGCA+AGG - chr7_1:59975830-59975849 None:intergenic 25.0%
! CCTTGCATATCATTTATATT+TGG + chr7_1:59975827-59975846 Msa1027540:intron 25.0%
!!! GTCTAATATTTCTACAGTTT+TGG + chr7_1:59976009-59976028 Msa1027540:intron 25.0%
! AAGACAAAGAAATTCAATGT+TGG - chr7_1:59976044-59976063 None:intergenic 25.0%
! AGAAAAATTGTAGCATTTGT+TGG + chr7_1:59976141-59976160 Msa1027540:CDS 25.0%
! GACATTACAAACAATACATA+AGG + chr7_1:59976218-59976237 Msa1027540:CDS 25.0%
! ATGATTATTGCATTCTTATG+TGG + chr7_1:59976438-59976457 Msa1027540:intron 25.0%
! TGATTATTGCATTCTTATGT+GGG + chr7_1:59976439-59976458 Msa1027540:intron 25.0%
! ACTTGTATCAACAGAATAAT+TGG - chr7_1:59976688-59976707 None:intergenic 25.0%
!!! TACAAGTTATTTTTCATACC+AGG + chr7_1:59976701-59976720 Msa1027540:intron 25.0%
!!! ACAAGTTATTTTTCATACCA+GGG + chr7_1:59976702-59976721 Msa1027540:intron 25.0%
!!! GATTTGCATTCTAAAATTGA+TGG + chr7_1:59976759-59976778 Msa1027540:CDS 25.0%
!! AATTGATTCAAGTTCTGTTA+AGG + chr7_1:59977087-59977106 Msa1027540:CDS 25.0%
!! ATTGATTCAAGTTCTGTTAA+GGG + chr7_1:59977088-59977107 Msa1027540:CDS 25.0%
!!! ATGAGAAGGTTATTTGTTAT+TGG + chr7_1:59977221-59977240 Msa1027540:intron 25.0%
!!! TTTTAAAAGTATACGAGCTT+TGG + chr7_1:59977474-59977493 Msa1027540:intron 25.0%
!! ATTTATGCTAGATTCTGTTT+TGG + chr7_1:59977536-59977555 Msa1027540:intron 25.0%
! CGCTAATAATTTAATTCCAA+TGG + chr7_1:59977563-59977582 Msa1027540:CDS 25.0%
!!! TTTTTGGCATTACAAATGAT+TGG + chr7_1:59977873-59977892 Msa1027540:intron 25.0%
!! GCTTAACTGTTAAATTGTTT+TGG + chr7_1:59977900-59977919 Msa1027540:intron 25.0%
!!! TATTTGAACTTTTTCTGTCT+TGG + chr7_1:59978101-59978120 Msa1027540:CDS 25.0%
! ATAATCTGACAGAAATTCTT+TGG + chr7_1:59978651-59978670 Msa1027540:intron 25.0%
! TAATCTGACAGAAATTCTTT+GGG + chr7_1:59978652-59978671 Msa1027540:intron 25.0%
! TAATTTACATCTCATCCTAA+TGG - chr7_1:59979026-59979045 None:intergenic 25.0%
!! GTTATTCTTTTTCCTTTCTT+AGG + chr7_1:59979115-59979134 Msa1027540:three_prime_UTR 25.0%
!!! ACAACAACAACACTTTTTAT+AGG - chr7_1:59979194-59979213 None:intergenic 25.0%
!! TGGGTGTTGAATAAAATGAA+GGG - chr7_1:59973066-59973085 None:intergenic 30.0%
GATGTAATTCGGATATGAAT+TGG - chr7_1:59973166-59973185 None:intergenic 30.0%
CAAGCAAGAATGATGTAATT+CGG - chr7_1:59973177-59973196 None:intergenic 30.0%
AACAATACAAGCAAGAACAA+TGG - chr7_1:59973322-59973341 None:intergenic 30.0%
CATTGAAAAGATCATCAGAT+TGG - chr7_1:59973345-59973364 None:intergenic 30.0%
GAAATGTAAGGATATGGATA+AGG - chr7_1:59973593-59973612 None:intergenic 30.0%
TGTGAAGAAATGTAAGGATA+TGG - chr7_1:59973599-59973618 None:intergenic 30.0%
AAGGAATGTGAAGAAATGTA+AGG - chr7_1:59973605-59973624 None:intergenic 30.0%
AGGATAGGAAGAATAGTTTA+AGG - chr7_1:59973624-59973643 None:intergenic 30.0%
!! TTTGATGATGATGATGATGA+TGG - chr7_1:59973662-59973681 None:intergenic 30.0%
! ACCTTTTATGCATTCGATTT+CGG + chr7_1:59974114-59974133 Msa1027540:CDS 30.0%
!! GATTATTCTGGCTCATTTAA+CGG + chr7_1:59974250-59974269 Msa1027540:CDS 30.0%
GATATGTTTGGAAAATTACC+TGG + chr7_1:59974418-59974437 Msa1027540:CDS 30.0%
AGTGTGAGCAATAAAATTGA+AGG + chr7_1:59974442-59974461 Msa1027540:CDS 30.0%
! CAATTGAGCTTTTATCATCA+AGG + chr7_1:59974799-59974818 Msa1027540:CDS 30.0%
TTTCCTCAAAGGAAAATAAG+TGG - chr7_1:59974860-59974879 None:intergenic 30.0%
!! ACTTATTTTCCTTTGAGGAA+AGG + chr7_1:59974859-59974878 Msa1027540:CDS 30.0%
!! CTTATTTTCCTTTGAGGAAA+GGG + chr7_1:59974860-59974879 Msa1027540:CDS 30.0%
!! TTATTTTCCTTTGAGGAAAG+GGG + chr7_1:59974861-59974880 Msa1027540:CDS 30.0%
GCTTGATATATATTACAGGA+TGG + chr7_1:59975016-59975035 Msa1027540:CDS 30.0%
GATATATATTACAGGATGGT+CGG + chr7_1:59975020-59975039 Msa1027540:CDS 30.0%
AAGATCACCTAAGGTATAAT+CGG - chr7_1:59975088-59975107 None:intergenic 30.0%
!!! TCCTACATCAAGAAGTATTT+TGG + chr7_1:59975161-59975180 Msa1027540:CDS 30.0%
!!! CCTACATCAAGAAGTATTTT+GGG + chr7_1:59975162-59975181 Msa1027540:CDS 30.0%
AATTTCTTTGTCTTCTTGTC+AGG + chr7_1:59976050-59976069 Msa1027540:intron 30.0%
TCATCAGAAAACTGTAATTG+TGG + chr7_1:59976095-59976114 Msa1027540:CDS 30.0%
! AAAATTGTAGCATTTGTTGG+TGG + chr7_1:59976144-59976163 Msa1027540:CDS 30.0%
GTTTGTAATGTCTTAAAGAG+AGG - chr7_1:59976210-59976229 None:intergenic 30.0%
TAGTTTACCAGATAATCAGA+TGG - chr7_1:59976325-59976344 None:intergenic 30.0%
ATCTGATTATCTGGTAAACT+AGG + chr7_1:59976324-59976343 Msa1027540:intron 30.0%
GATTATTGCATTCTTATGTG+GGG + chr7_1:59976440-59976459 Msa1027540:intron 30.0%
ATTATTGCATTCTTATGTGG+GGG + chr7_1:59976441-59976460 Msa1027540:intron 30.0%
TTAGATATACAATTTCGGAC+AGG - chr7_1:59976607-59976626 None:intergenic 30.0%
TCAATGTTAAATCTGTATCG+CGG + chr7_1:59976639-59976658 Msa1027540:intron 30.0%
TGATGTCTTAACTAACTTTG+AGG + chr7_1:59976794-59976813 Msa1027540:CDS 30.0%
TTAAAAGCTTCAAAACCACA+GGG + chr7_1:59976825-59976844 Msa1027540:CDS 30.0%
GAAAGAATTCCAGATGTTAT+TGG + chr7_1:59976894-59976913 Msa1027540:CDS 30.0%
!! TTCGTTTTCGAGAAAAAAAG+AGG - chr7_1:59977026-59977045 None:intergenic 30.0%
TATTTGTAGAACCTTGTATG+TGG + chr7_1:59977245-59977264 Msa1027540:intron 30.0%
ATTTGTAGAACCTTGTATGT+GGG + chr7_1:59977246-59977265 Msa1027540:intron 30.0%
TTACAATTGGAGTCAACATA+AGG + chr7_1:59977373-59977392 Msa1027540:CDS 30.0%
!! AAAATAGGAGTATCATACCA+AGG - chr7_1:59977400-59977419 None:intergenic 30.0%
! CAGCTTTTGTATGCAAAAAT+AGG - chr7_1:59977415-59977434 None:intergenic 30.0%
!! ATCTTTAGAGCAATTTCCAT+TGG - chr7_1:59977582-59977601 None:intergenic 30.0%
TGAATATCAAAAACTTGGCA+AGG + chr7_1:59977736-59977755 Msa1027540:intron 30.0%
TCCAAAATTCACAGTAGTTT+GGG - chr7_1:59977814-59977833 None:intergenic 30.0%
TTCCAAAATTCACAGTAGTT+TGG - chr7_1:59977815-59977834 None:intergenic 30.0%
CAATAATGCACATGTTAATC+TGG + chr7_1:59977971-59977990 Msa1027540:intron 30.0%
GATGTATGAGACAATTTCAA+AGG + chr7_1:59978034-59978053 Msa1027540:CDS 30.0%
! AGCGTAAGGAATATTTTCTA+GGG - chr7_1:59978214-59978233 None:intergenic 30.0%
! ATGATTTCATAAAGAGCGTA+AGG - chr7_1:59978228-59978247 None:intergenic 30.0%
GGCATACAATCATTACTATT+GGG + chr7_1:59978263-59978282 Msa1027540:intron 30.0%
! TGATGATGAATATGTCATAG+TGG + chr7_1:59978388-59978407 Msa1027540:CDS 30.0%
GATGATGAATATGTCATAGT+GGG + chr7_1:59978389-59978408 Msa1027540:CDS 30.0%
AATATTCTTACTTGTCCAAG+TGG - chr7_1:59978518-59978537 None:intergenic 30.0%
AAAAATCAAAGAGATGCCAA+TGG - chr7_1:59978584-59978603 None:intergenic 30.0%
CAGATTATAGTACATGTTGA+TGG - chr7_1:59978639-59978658 None:intergenic 30.0%
AACTATACTATGTAGATCCA+TGG + chr7_1:59978675-59978694 Msa1027540:intron 30.0%
GGAAAAAGAATAACCTGTAA+AGG - chr7_1:59979109-59979128 None:intergenic 30.0%
TTGTGAGTTAATCCTAAGAA+AGG - chr7_1:59979130-59979149 None:intergenic 30.0%
AACAAGATTCGTTGAAACAG+AGG - chr7_1:59972999-59973018 None:intergenic 35.0%
TTGTTCTTCTTCATCCCAAT+TGG + chr7_1:59973014-59973033 Msa1027540:five_prime_UTR 35.0%
TGTTCTTCTTCATCCCAATT+GGG + chr7_1:59973015-59973034 Msa1027540:five_prime_UTR 35.0%
!! GTGGGTGTTGAATAAAATGA+AGG - chr7_1:59973067-59973086 None:intergenic 35.0%
CAAGCAAGAACAATGGTAAT+TGG - chr7_1:59973315-59973334 None:intergenic 35.0%
TAAGGGTTTGGATACCTATA+TGG - chr7_1:59973470-59973489 None:intergenic 35.0%
TGAGTATGAGAATGTGCATA+TGG - chr7_1:59973560-59973579 None:intergenic 35.0%
ATGTAAGGATATGGATAAGG+AGG - chr7_1:59973590-59973609 None:intergenic 35.0%
CATGTTGTAATAAGCTAGCA+TGG - chr7_1:59973826-59973845 None:intergenic 35.0%
! CATGCTAGCTTATTACAACA+TGG + chr7_1:59973824-59973843 Msa1027540:CDS 35.0%
TTCATTAGATCATCCAAACG+CGG - chr7_1:59974025-59974044 None:intergenic 35.0%
ACCGAAATCGAATGCATAAA+AGG - chr7_1:59974118-59974137 None:intergenic 35.0%
ATCAAAGTTGCAACAGAAGA+AGG + chr7_1:59974138-59974157 Msa1027540:CDS 35.0%
! CAGAAGAAGGAGGATTTTTA+TGG + chr7_1:59974151-59974170 Msa1027540:CDS 35.0%
AGCCAAGAATCTTCCAAATA+TGG + chr7_1:59974372-59974391 Msa1027540:CDS 35.0%
GTCCATATTTGGAAGATTCT+TGG - chr7_1:59974377-59974396 None:intergenic 35.0%
TTGTGGAACATGTCCATATT+TGG - chr7_1:59974388-59974407 None:intergenic 35.0%
GACATGTTCCACAAAACATT+GGG + chr7_1:59974394-59974413 Msa1027540:CDS 35.0%
ACATGTTCCACAAAACATTG+GGG + chr7_1:59974395-59974414 Msa1027540:CDS 35.0%
AAAACATTGGGGGATATGTT+TGG + chr7_1:59974406-59974425 Msa1027540:CDS 35.0%
! ATTTTATTGCTCACACTACC+AGG - chr7_1:59974439-59974458 None:intergenic 35.0%
AATCGAAACATAAGGATCAC+TGG - chr7_1:59974488-59974507 None:intergenic 35.0%
TCCTTATGTTTCGATTTCAG+TGG + chr7_1:59974492-59974511 Msa1027540:CDS 35.0%
TGTTAAAGACAGTGATGTTG+TGG + chr7_1:59974624-59974643 Msa1027540:CDS 35.0%
GTTAAAGACAGTGATGTTGT+GGG + chr7_1:59974625-59974644 Msa1027540:CDS 35.0%
CAGTGGAACAAATATACTCA+GGG + chr7_1:59974677-59974696 Msa1027540:CDS 35.0%
AGTGGAACAAATATACTCAG+GGG + chr7_1:59974678-59974697 Msa1027540:CDS 35.0%
AAAAGCTCAATTGCTCCATT+GGG - chr7_1:59974792-59974811 None:intergenic 35.0%
TAAAAGCTCAATTGCTCCAT+TGG - chr7_1:59974793-59974812 None:intergenic 35.0%
! AGCTTTTATCATCAAGGAGT+TGG + chr7_1:59974805-59974824 Msa1027540:CDS 35.0%
!! TATTTTCCTTTGAGGAAAGG+GGG + chr7_1:59974862-59974881 Msa1027540:CDS 35.0%
CACTATCAAGCAACACATTA+GGG - chr7_1:59974933-59974952 None:intergenic 35.0%
!! CTAATGTGTTGCTTGATAGT+GGG + chr7_1:59974932-59974951 Msa1027540:CDS 35.0%
! TTTATGTGCATGGAAAGTGT+TGG + chr7_1:59974959-59974978 Msa1027540:CDS 35.0%
!! GCACAAAGTTAGGTTGATAA+GGG + chr7_1:59975047-59975066 Msa1027540:CDS 35.0%
!! TAAGAGTGCTTCTCCTTATT+TGG + chr7_1:59975133-59975152 Msa1027540:CDS 35.0%
!! AAGAGTGCTTCTCCTTATTT+GGG + chr7_1:59975134-59975153 Msa1027540:CDS 35.0%
ATGTAGGATCATCCCAAATA+AGG - chr7_1:59975149-59975168 None:intergenic 35.0%
CCCAAAATACTTCTTGATGT+AGG - chr7_1:59975165-59975184 None:intergenic 35.0%
TATGCTTTCATTTCTGTGCT+TGG + chr7_1:59975221-59975240 Msa1027540:intron 35.0%
CTTTGGCTATACATAAAGGA+TGG + chr7_1:59975582-59975601 Msa1027540:intron 35.0%
! ATACATAAAGGATGGTGTCA+TGG + chr7_1:59975590-59975609 Msa1027540:intron 35.0%
AAGCAAAGGGTTAGATTTGA+CGG + chr7_1:59975708-59975727 Msa1027540:intron 35.0%
GTAATGTCTTAAAGAGAGGA+TGG - chr7_1:59976206-59976225 None:intergenic 35.0%
TTATCACAACCCAACTTTCA+CGG + chr7_1:59976245-59976264 Msa1027540:CDS 35.0%
AAGAGATTACCGTGAAAGTT+GGG - chr7_1:59976257-59976276 None:intergenic 35.0%
TAAGAGATTACCGTGAAAGT+TGG - chr7_1:59976258-59976277 None:intergenic 35.0%
CAGTTATCCATCTGATTATC+TGG + chr7_1:59976315-59976334 Msa1027540:intron 35.0%
!! TCTGGTAAACTAGGTATTGA+TGG + chr7_1:59976333-59976352 Msa1027540:intron 35.0%
TTAGAATGCAAATCATGCCA+CGG - chr7_1:59976753-59976772 None:intergenic 35.0%
!! GCATTCTAAAATTGATGGTC+CGG + chr7_1:59976764-59976783 Msa1027540:CDS 35.0%
GTTAAAAGCTTCAAAACCAC+AGG + chr7_1:59976824-59976843 Msa1027540:CDS 35.0%
TAAAAGCTTCAAAACCACAG+GGG + chr7_1:59976826-59976845 Msa1027540:CDS 35.0%
ATTTCCAAAAGATCCAAGAG+AGG + chr7_1:59977111-59977130 Msa1027540:CDS 35.0%
TAACCTTCTCATACACAAGT+TGG - chr7_1:59977213-59977232 None:intergenic 35.0%
TATACTTGACCATTTGCATC+TGG + chr7_1:59977437-59977456 Msa1027540:intron 35.0%
! AAAGTATACGAGCTTTGGTA+TGG + chr7_1:59977479-59977498 Msa1027540:intron 35.0%
ACATATTGGATACAGGCTTT+GGG - chr7_1:59977513-59977532 None:intergenic 35.0%
AACATATTGGATACAGGCTT+TGG - chr7_1:59977514-59977533 None:intergenic 35.0%
!! GGAAATTGCTCTAAAGATTG+CGG + chr7_1:59977584-59977603 Msa1027540:CDS 35.0%
! TCCCAAACTACTGTGAATTT+TGG + chr7_1:59977810-59977829 Msa1027540:intron 35.0%
TGGCATTACAAATGATTGGT+AGG + chr7_1:59977877-59977896 Msa1027540:intron 35.0%
GGCATTACAAATGATTGGTA+GGG + chr7_1:59977878-59977897 Msa1027540:intron 35.0%
!! ATTGAACAAGTACTGAGTAG+CGG - chr7_1:59977955-59977974 None:intergenic 35.0%
TGAGACAATTTCAAAGGCTT+TGG + chr7_1:59978040-59978059 Msa1027540:CDS 35.0%
CTACGAAAATATCAGTGTGT+CGG + chr7_1:59978145-59978164 Msa1027540:CDS 35.0%
TACGAAAATATCAGTGTGTC+GGG + chr7_1:59978146-59978165 Msa1027540:CDS 35.0%
! ATACTTGTGGACTATTTGCT+GGG - chr7_1:59978181-59978200 None:intergenic 35.0%
! GAGCGTAAGGAATATTTTCT+AGG - chr7_1:59978215-59978234 None:intergenic 35.0%
CGGCATACAATCATTACTAT+TGG + chr7_1:59978262-59978281 Msa1027540:intron 35.0%
AGAAAACATTCCTATCCACT+TGG + chr7_1:59978500-59978519 Msa1027540:CDS 35.0%
TTTGGCCATATAGTTTCCAT+TGG + chr7_1:59978565-59978584 Msa1027540:intron 35.0%
AGATGCCAATGGAAACTATA+TGG - chr7_1:59978573-59978592 None:intergenic 35.0%
CTATGTAGATCCATGGATAT+AGG + chr7_1:59978682-59978701 Msa1027540:intron 35.0%
AAAGTGACATCCTATATCCA+TGG - chr7_1:59978695-59978714 None:intergenic 35.0%
! ATGGATATAGGATGTCACTT+TGG + chr7_1:59978694-59978713 Msa1027540:CDS 35.0%
!! TGGATATAGGATGTCACTTT+GGG + chr7_1:59978695-59978714 Msa1027540:CDS 35.0%
AATGGTAAGATTCTCCTTCA+TGG - chr7_1:59978961-59978980 None:intergenic 35.0%
AAGGAGAATCTTACCATTTG+AGG + chr7_1:59978963-59978982 Msa1027540:CDS 35.0%
GTAATCATCAGTTCCTCAAA+TGG - chr7_1:59978979-59978998 None:intergenic 35.0%
GTATAGTCAAACACCTTTAC+AGG + chr7_1:59979093-59979112 Msa1027540:three_prime_UTR 35.0%
TTGAAACAGAGGAAGAACGA+AGG - chr7_1:59972988-59973007 None:intergenic 40.0%
GGTTAGGGGGATACATATAA+GGG - chr7_1:59973487-59973506 None:intergenic 40.0%
TATGGATCTTGAGGTGGATA+TGG - chr7_1:59973542-59973561 None:intergenic 40.0%
GAATGTGCATATGGATCTTG+AGG - chr7_1:59973551-59973570 None:intergenic 40.0%
!! GATGATGATGATGATGATGG+TGG - chr7_1:59973659-59973678 None:intergenic 40.0%
! GGAGGGTATGCATAATCAAA+TGG - chr7_1:59973695-59973714 None:intergenic 40.0%
ACTAATTGATGAAGAGGAGC+AGG - chr7_1:59973719-59973738 None:intergenic 40.0%
!! GAGGGTACTAATTGATGAAG+AGG - chr7_1:59973725-59973744 None:intergenic 40.0%
TTATGACGCGAATGAAGATC+AGG - chr7_1:59973902-59973921 None:intergenic 40.0%
GCTGTTGAACTTGATGTATC+TGG - chr7_1:59973947-59973966 None:intergenic 40.0%
GATACATCAAGTTCAACAGC+AGG + chr7_1:59973947-59973966 Msa1027540:CDS 40.0%
AAAGTTGCAACAGAAGAAGG+AGG + chr7_1:59974141-59974160 Msa1027540:CDS 40.0%
CATTCGAATAACTCCTTCTC+CGG + chr7_1:59974175-59974194 Msa1027540:CDS 40.0%
CTTTCGGTTTCGGATTATTC+TGG + chr7_1:59974238-59974257 Msa1027540:CDS 40.0%
ATTGTTCCGGTGCAGAATAA+AGG + chr7_1:59974298-59974317 Msa1027540:CDS 40.0%
TTGTTCCGGTGCAGAATAAA+GGG + chr7_1:59974299-59974318 Msa1027540:CDS 40.0%
ATGAAGGAGCAAAACTCTCA+AGG - chr7_1:59974326-59974345 None:intergenic 40.0%
! TTGAGAGTTTTGCTCCTTCA+TGG + chr7_1:59974325-59974344 Msa1027540:CDS 40.0%
GGACATGTTCCACAAAACAT+TGG + chr7_1:59974393-59974412 Msa1027540:CDS 40.0%
CATGTTCCACAAAACATTGG+GGG + chr7_1:59974396-59974415 Msa1027540:CDS 40.0%
! ACATATCCCCCAATGTTTTG+TGG - chr7_1:59974405-59974424 None:intergenic 40.0%
GCCACTGAAATCGAAACATA+AGG - chr7_1:59974496-59974515 None:intergenic 40.0%
TTCGATTTCAGTGGCAAATG+CGG + chr7_1:59974501-59974520 Msa1027540:CDS 40.0%
! GCAATTCTGAAAACCCTGTT+TGG + chr7_1:59974548-59974567 Msa1027540:CDS 40.0%
!! AGAAGTGTTGACTCCAAACA+GGG - chr7_1:59974564-59974583 None:intergenic 40.0%
!! TAGAAGTGTTGACTCCAAAC+AGG - chr7_1:59974565-59974584 None:intergenic 40.0%
CCTGAGTATATTTGTTCCAC+TGG - chr7_1:59974679-59974698 None:intergenic 40.0%
CCAGTGGAACAAATATACTC+AGG + chr7_1:59974676-59974695 Msa1027540:CDS 40.0%
! AATGGGAAGCCTTATAAGCA+AGG + chr7_1:59974736-59974755 Msa1027540:CDS 40.0%
TTGGGATGTACTGAATGGAT+AGG - chr7_1:59974774-59974793 None:intergenic 40.0%
ATCCATTCAGTACATCCCAA+TGG + chr7_1:59974774-59974793 Msa1027540:CDS 40.0%
CTCAAAGGAAAATAAGTGGC+AGG - chr7_1:59974856-59974875 None:intergenic 40.0%
!! CTGCCACTTATTTTCCTTTG+AGG + chr7_1:59974854-59974873 Msa1027540:CDS 40.0%
ATCAAGCAACACATTAGGGA+GGG - chr7_1:59974929-59974948 None:intergenic 40.0%
TATCAAGCAACACATTAGGG+AGG - chr7_1:59974930-59974949 None:intergenic 40.0%
CCACTATCAAGCAACACATT+AGG - chr7_1:59974934-59974953 None:intergenic 40.0%
!! CCTAATGTGTTGCTTGATAG+TGG + chr7_1:59974931-59974950 Msa1027540:CDS 40.0%
! AGTGGGATGTTTTATGTGCA+TGG + chr7_1:59974949-59974968 Msa1027540:CDS 40.0%
CGCCGCTTGATATATATTAC+AGG + chr7_1:59975012-59975031 Msa1027540:CDS 40.0%
!! GGCACAAAGTTAGGTTGATA+AGG + chr7_1:59975046-59975065 Msa1027540:CDS 40.0%
TACCCATCCGATTATACCTT+AGG + chr7_1:59975078-59975097 Msa1027540:CDS 40.0%
CACCTAAGGTATAATCGGAT+GGG - chr7_1:59975083-59975102 None:intergenic 40.0%
TCACCTAAGGTATAATCGGA+TGG - chr7_1:59975084-59975103 None:intergenic 40.0%
TGTCTTCAGAAGATCACCTA+AGG - chr7_1:59975097-59975116 None:intergenic 40.0%
CTGAAGACAAAGTCACAAGA+AGG + chr7_1:59975108-59975127 Msa1027540:CDS 40.0%
ATTTCTGTGCTTGGAATTGC+TGG + chr7_1:59975230-59975249 Msa1027540:intron 40.0%
TTGGAATTGCTGGTAGGATT+TGG + chr7_1:59975240-59975259 Msa1027540:intron 40.0%
! AATTGCTGGTAGGATTTGGT+TGG + chr7_1:59975244-59975263 Msa1027540:intron 40.0%
TATCGAGCTCAGGTATAGTA+AGG - chr7_1:59975366-59975385 None:intergenic 40.0%
!! GTTTTCAAGATATCGAGCTC+AGG - chr7_1:59975376-59975395 None:intergenic 40.0%
TCTCAAGTCTAAACGTGAAC+AGG - chr7_1:59975398-59975417 None:intergenic 40.0%
CAACTCATGATGAGGAAACT+AGG + chr7_1:59975613-59975632 Msa1027540:CDS 40.0%
TTGTCTTCTTGTCAGGAAGT+TGG + chr7_1:59976057-59976076 Msa1027540:intron 40.0%
! GGTGGACTTGATTTATGTGA+TGG + chr7_1:59976162-59976181 Msa1027540:CDS 40.0%
!! GATGGTGAGGAGTATCATAT+CGG - chr7_1:59976188-59976207 None:intergenic 40.0%
! AGTCTTATCGTGCTACAATG+TGG - chr7_1:59976290-59976309 None:intergenic 40.0%
! GGTCTTCTTTTTCTGCTTAC+TGG - chr7_1:59976667-59976686 None:intergenic 40.0%
! TTTTCATACCAGGGTAACAC+TGG + chr7_1:59976711-59976730 Msa1027540:intron 40.0%
GTTAAGACATCATAAGCTGC+CGG - chr7_1:59976786-59976805 None:intergenic 40.0%
TTCAACTTCTTTATCCCCTG+TGG - chr7_1:59976843-59976862 None:intergenic 40.0%
! TGATGATGCTTTACTCAGAC+TGG + chr7_1:59976872-59976891 Msa1027540:CDS 40.0%
GTGAGAATGATCCTGAATCA+TGG + chr7_1:59976937-59976956 Msa1027540:CDS 40.0%
GAACCAACTTGTGTATGAGA+AGG + chr7_1:59977207-59977226 Msa1027540:intron 40.0%
CATACATACAGCATACGTGA+AGG + chr7_1:59977292-59977311 Msa1027540:CDS 40.0%
!! TCATCGGCTCTTCTTACAAT+TGG + chr7_1:59977360-59977379 Msa1027540:CDS 40.0%
AGTATAGCACCAGATGCAAA+TGG - chr7_1:59977449-59977468 None:intergenic 40.0%
!!! ATGCTAGATTCTGTTTTGGC+AGG + chr7_1:59977540-59977559 Msa1027540:intron 40.0%
CCAGAATAGAATCCTTTGTG+TGG - chr7_1:59977688-59977707 None:intergenic 40.0%
CCACACAAAGGATTCTATTC+TGG + chr7_1:59977685-59977704 Msa1027540:CDS 40.0%
ACAAAGGATTCTATTCTGGC+AGG + chr7_1:59977689-59977708 Msa1027540:CDS 40.0%
! ATAGTCTTGCACAGAGAATG+CGG - chr7_1:59978084-59978103 None:intergenic 40.0%
! TTTCTGTCTTGGTAATCGAG+AGG + chr7_1:59978112-59978131 Msa1027540:CDS 40.0%
! TACTTGTGGACTATTTGCTG+GGG - chr7_1:59978180-59978199 None:intergenic 40.0%
! CATACTTGTGGACTATTTGC+TGG - chr7_1:59978182-59978201 None:intergenic 40.0%
TTACTATTGGGTGAATCGAC+TGG + chr7_1:59978275-59978294 Msa1027540:intron 40.0%
ATCGACTGGTAATTGTTGTG+TGG + chr7_1:59978289-59978308 Msa1027540:intron 40.0%
GACTATTTCGACTATTTGCC+TGG - chr7_1:59978328-59978347 None:intergenic 40.0%
GAACATTAACCAACGCTCTA+TGG + chr7_1:59978418-59978437 Msa1027540:CDS 40.0%
ATTAACCAACGCTCTATGGA+AGG + chr7_1:59978422-59978441 Msa1027540:CDS 40.0%
ATACCAACCTCATCATACCT+GGG + chr7_1:59978475-59978494 Msa1027540:CDS 40.0%
! ATAGGAATGTTTTCTTGCCC+AGG - chr7_1:59978495-59978514 None:intergenic 40.0%
TCTTACTTGTCCAAGTGGAT+AGG - chr7_1:59978513-59978532 None:intergenic 40.0%
GAGCAATTGGTGAAATGAAC+TGG + chr7_1:59978787-59978806 Msa1027540:CDS 40.0%
AATGATGTGACAGAGATGAG+AGG + chr7_1:59978825-59978844 Msa1027540:CDS 40.0%
ATGATGTGACAGAGATGAGA+GGG + chr7_1:59978826-59978845 Msa1027540:CDS 40.0%
CCTTTCGATCAACTTCTACA+GGG - chr7_1:59978866-59978885 None:intergenic 40.0%
! CCTGTAGAAGTTGATCGAAA+GGG + chr7_1:59978864-59978883 Msa1027540:CDS 40.0%
! CTGTAGAAGTTGATCGAAAG+GGG + chr7_1:59978865-59978884 Msa1027540:CDS 40.0%
! CAATTTTTCCTCCGACATCA+GGG - chr7_1:59978923-59978942 None:intergenic 40.0%
! ACAATTTTTCCTCCGACATC+AGG - chr7_1:59978924-59978943 None:intergenic 40.0%
GATGTCGGAGGAAAAATTGT+TGG + chr7_1:59978924-59978943 Msa1027540:CDS 40.0%
TGGATCATTTCTTGCCATGA+AGG + chr7_1:59978944-59978963 Msa1027540:CDS 40.0%
GTCACATTCTACTAGCCATT+AGG + chr7_1:59979008-59979027 Msa1027540:three_prime_UTR 40.0%
AAGAACGAAGGAAGGAAGGA+AGG - chr7_1:59972976-59972995 None:intergenic 45.0%
AACAGAGGAAGAACGAAGGA+AGG - chr7_1:59972984-59973003 None:intergenic 45.0%
GGGGGATACATATAAGGGTT+TGG - chr7_1:59973482-59973501 None:intergenic 45.0%
GGGTTAGGGGGATACATATA+AGG - chr7_1:59973488-59973507 None:intergenic 45.0%
!! GATATGGTGGATGAGGATGA+GGG - chr7_1:59973526-59973545 None:intergenic 45.0%
TGTGCATATGGATCTTGAGG+TGG - chr7_1:59973548-59973567 None:intergenic 45.0%
!! GATGATGATGATGATGGTGG+TGG - chr7_1:59973656-59973675 None:intergenic 45.0%
AATTGATGAAGAGGAGCAGG+TGG - chr7_1:59973716-59973735 None:intergenic 45.0%
TGTGAAAGGGAATGTTGAGG+AGG - chr7_1:59973797-59973816 None:intergenic 45.0%
GAGTGTGAAAGGGAATGTTG+AGG - chr7_1:59973800-59973819 None:intergenic 45.0%
AGCATGGTGTGAGTGTGAAA+GGG - chr7_1:59973810-59973829 None:intergenic 45.0%
TAGCATGGTGTGAGTGTGAA+AGG - chr7_1:59973811-59973830 None:intergenic 45.0%
TCGCGTCATAATAGCTTCTC+TGG + chr7_1:59973911-59973930 Msa1027540:CDS 45.0%
ATAGCTTCTCTGGTCCTTAC+TGG + chr7_1:59973921-59973940 Msa1027540:CDS 45.0%
CTTGATGTATCTGGCCAGTA+AGG - chr7_1:59973938-59973957 None:intergenic 45.0%
ACATCAAGTTCAACAGCAGG+TGG + chr7_1:59973950-59973969 Msa1027540:CDS 45.0%
! GGTGGAGTATCACAAACTAG+TGG + chr7_1:59973971-59973990 Msa1027540:CDS 45.0%
! GGAGTATCACAAACTAGTGG+TGG + chr7_1:59973974-59973993 Msa1027540:CDS 45.0%
GAATAACTCCTTCTCCGGTT+GGG + chr7_1:59974180-59974199 Msa1027540:CDS 45.0%
AATAACTCCTTCTCCGGTTG+GGG + chr7_1:59974181-59974200 Msa1027540:CDS 45.0%
GGTGAACTCAGGTAGACTTT+CGG + chr7_1:59974222-59974241 Msa1027540:CDS 45.0%
CTCAGGTAGACTTTCGGTTT+CGG + chr7_1:59974228-59974247 Msa1027540:CDS 45.0%
TCAGAGCATGCAGATTGTTC+CGG + chr7_1:59974285-59974304 Msa1027540:CDS 45.0%
AAGGACCCTTTATTCTGCAC+CGG - chr7_1:59974307-59974326 None:intergenic 45.0%
TCAGTGGCAAATGCGGTAAT+TGG + chr7_1:59974508-59974527 Msa1027540:CDS 45.0%
CAGTGGCAAATGCGGTAATT+GGG + chr7_1:59974509-59974528 Msa1027540:CDS 45.0%
TCAGCAGCATTATGTGCAAC+AGG - chr7_1:59974592-59974611 None:intergenic 45.0%
TTCACAGCTCATTGGTACTG+TGG + chr7_1:59974648-59974667 Msa1027540:CDS 45.0%
ATACTCAGGGGCAATAGTTC+AGG + chr7_1:59974690-59974709 Msa1027540:CDS 45.0%
TACTCAGGGGCAATAGTTCA+GGG + chr7_1:59974691-59974710 Msa1027540:CDS 45.0%
AGTGCAGCACCTTGCTTATA+AGG - chr7_1:59974748-59974767 None:intergenic 45.0%
CTCCATTGGGATGTACTGAA+TGG - chr7_1:59974779-59974798 None:intergenic 45.0%
TATCATCAAGGAGTTGGAGC+AGG + chr7_1:59974811-59974830 Msa1027540:CDS 45.0%
ATCATCAAGGAGTTGGAGCA+GGG + chr7_1:59974812-59974831 Msa1027540:CDS 45.0%
GCAGGAACGCCAATATATTC+AGG - chr7_1:59974838-59974857 None:intergenic 45.0%
ACATTTCCCCCTTTCCTCAA+AGG - chr7_1:59974871-59974890 None:intergenic 45.0%
CAAGATGCTCATGTTCCAGA+TGG + chr7_1:59974901-59974920 Msa1027540:CDS 45.0%
ATATTACAGGATGGTCGGTG+TGG + chr7_1:59975025-59975044 Msa1027540:CDS 45.0%
!! GTTAGGTTGATAAGGGATGC+CGG + chr7_1:59975054-59975073 Msa1027540:CDS 45.0%
GGTATAATCGGATGGGTAAC+CGG - chr7_1:59975076-59975095 None:intergenic 45.0%
TGTCATGGCAACTCATGATG+AGG + chr7_1:59975605-59975624 Msa1027540:CDS 45.0%
CTCATGATGAGGAAACTAGG+CGG + chr7_1:59975616-59975635 Msa1027540:CDS 45.0%
ACATAGCTGGGTCAAGCAAA+GGG + chr7_1:59975695-59975714 Msa1027540:CDS 45.0%
GTAATTGTGGATGCTGATGC+TGG + chr7_1:59976108-59976127 Msa1027540:CDS 45.0%
GTCTTAAAGAGAGGATGGTG+AGG - chr7_1:59976201-59976220 None:intergenic 45.0%
!! CTACGTTTTAGTAGCTCCTG+AGG + chr7_1:59976393-59976412 Msa1027540:intron 45.0%
! CCTTATGCTTTGACTTCCTC+AGG - chr7_1:59976412-59976431 None:intergenic 45.0%
CCTGAGGAAGTCAAAGCATA+AGG + chr7_1:59976409-59976428 Msa1027540:intron 45.0%
TAACACTGGTGGTTGTCCAA+GGG + chr7_1:59976725-59976744 Msa1027540:CDS 45.0%
! TAACTAACTTTGAGGAGCGC+TGG + chr7_1:59976802-59976821 Msa1027540:CDS 45.0%
TCAGGATCATTCTCACCACT+AGG - chr7_1:59976933-59976952 None:intergenic 45.0%
TCCTGAATCATGGCATGTTC+AGG + chr7_1:59976947-59976966 Msa1027540:CDS 45.0%
ACCTGAACATGCCATGATTC+AGG - chr7_1:59976951-59976970 None:intergenic 45.0%
TGGAGTCAACATAAGGACCT+TGG + chr7_1:59977380-59977399 Msa1027540:CDS 45.0%
GTAATTCCAATGTGGCCAGA+AGG + chr7_1:59977645-59977664 Msa1027540:CDS 45.0%
GGATTCTATTCTGGCAGGTA+CGG + chr7_1:59977694-59977713 Msa1027540:intron 45.0%
GGCTGCGTAATGTCAAAGAA+AGG + chr7_1:59977921-59977940 Msa1027540:intron 45.0%
! TCAAAGGCTTTGGTTGAAGC+TGG + chr7_1:59978050-59978069 Msa1027540:CDS 45.0%
! CAAAGGCTTTGGTTGAAGCT+GGG + chr7_1:59978051-59978070 Msa1027540:CDS 45.0%
! ACTTGTGGACTATTTGCTGG+GGG - chr7_1:59978179-59978198 None:intergenic 45.0%
GGGTGTTAGTGACATACTTG+TGG - chr7_1:59978194-59978213 None:intergenic 45.0%
GACTGGTAATTGTTGTGTGG+TGG + chr7_1:59978292-59978311 Msa1027540:intron 45.0%
!! AGAGCGTTGGTTAATGTTCG+CGG - chr7_1:59978417-59978436 None:intergenic 45.0%
TTGTTCCTTCCATAGAGCGT+TGG - chr7_1:59978430-59978449 None:intergenic 45.0%
AACGCTCTATGGAAGGAACA+AGG + chr7_1:59978429-59978448 Msa1027540:CDS 45.0%
ACGCTCTATGGAAGGAACAA+GGG + chr7_1:59978430-59978449 Msa1027540:CDS 45.0%
AAGGGACAGTGAGATTGCAA+TGG + chr7_1:59978448-59978467 Msa1027540:CDS 45.0%
AGGGACAGTGAGATTGCAAT+GGG + chr7_1:59978449-59978468 Msa1027540:CDS 45.0%
CATACCAACCTCATCATACC+TGG + chr7_1:59978474-59978493 Msa1027540:CDS 45.0%
TTTCTTGCCCAGGTATGATG+AGG - chr7_1:59978485-59978504 None:intergenic 45.0%
TCACTTTGGGCAGAACATAC+TGG + chr7_1:59978708-59978727 Msa1027540:CDS 45.0%
TAACCTTTCGCACGCATTCA+AGG - chr7_1:59978767-59978786 None:intergenic 45.0%
GTGCGAAAGGTTAGAGCAAT+TGG + chr7_1:59978774-59978793 Msa1027540:CDS 45.0%
! CCCTGTAGAAGTTGATCGAA+AGG + chr7_1:59978863-59978882 Msa1027540:CDS 45.0%
CCCTTTCGATCAACTTCTAC+AGG - chr7_1:59978867-59978886 None:intergenic 45.0%
TCAGGGAACTCTTCATGACT+GGG - chr7_1:59978906-59978925 None:intergenic 45.0%
ATCAGGGAACTCTTCATGAC+TGG - chr7_1:59978907-59978926 None:intergenic 45.0%
CATGAAGAGTTCCCTGATGT+CGG + chr7_1:59978909-59978928 Msa1027540:CDS 45.0%
AGCAGTTGACAACGTGTACG+AGG - chr7_1:59972931-59972950 None:intergenic 50.0%
GAGGAAGAACGAAGGAAGGA+AGG - chr7_1:59972980-59972999 None:intergenic 50.0%
!! GGATATGGTGGATGAGGATG+AGG - chr7_1:59973527-59973546 None:intergenic 50.0%
!! TGAGGTGGATATGGTGGATG+AGG - chr7_1:59973533-59973552 None:intergenic 50.0%
GGATCTTGAGGTGGATATGG+TGG - chr7_1:59973539-59973558 None:intergenic 50.0%
!! TGGTGGTGGTGATCTAGGAT+AGG - chr7_1:59973639-59973658 None:intergenic 50.0%
!! GATGATGATGATGGTGGTGG+TGG - chr7_1:59973653-59973672 None:intergenic 50.0%
GGAACATGGTAGGGGTAAGA+GGG - chr7_1:59973755-59973774 None:intergenic 50.0%
AGGAACATGGTAGGGGTAAG+AGG - chr7_1:59973756-59973775 None:intergenic 50.0%
GACGCGAATGAAGATCAGGA+CGG - chr7_1:59973898-59973917 None:intergenic 50.0%
TCAAGTTCAACAGCAGGTGG+TGG + chr7_1:59973953-59973972 Msa1027540:CDS 50.0%
TCCAAACGCGGATAAGCAGA+CGG - chr7_1:59974013-59974032 None:intergenic 50.0%
CGAATAACTCCTTCTCCGGT+TGG + chr7_1:59974179-59974198 Msa1027540:CDS 50.0%
TGGCAAATGCGGTAATTGGG+AGG + chr7_1:59974512-59974531 Msa1027540:CDS 50.0%
GTTGTGGGTTCACAGCTCAT+TGG + chr7_1:59974640-59974659 Msa1027540:CDS 50.0%
TGGTACTGTGGCAATTCCAG+TGG + chr7_1:59974660-59974679 Msa1027540:CDS 50.0%
GGAGCAGGGCCTGAATATAT+TGG + chr7_1:59974826-59974845 Msa1027540:CDS 50.0%
!! ACATTAGGGAGGGTACCATC+TGG - chr7_1:59974919-59974938 None:intergenic 50.0%
CTGTGCTTGGAATTGCTGGT+AGG + chr7_1:59975234-59975253 Msa1027540:intron 50.0%
TACGAGGACAAAGCAGCACA+TGG - chr7_1:59975662-59975681 None:intergenic 50.0%
TGCGGGAAAACGACATAGCT+GGG + chr7_1:59975683-59975702 Msa1027540:CDS 50.0%
GACATAGCTGGGTCAAGCAA+AGG + chr7_1:59975694-59975713 Msa1027540:CDS 50.0%
TCATACCAGGGTAACACTGG+TGG + chr7_1:59976714-59976733 Msa1027540:intron 50.0%
GTAACACTGGTGGTTGTCCA+AGG + chr7_1:59976724-59976743 Msa1027540:CDS 50.0%
! GTCGCCTCTCTTGGATCTTT+TGG - chr7_1:59977118-59977137 None:intergenic 50.0%
AAAGATCCAAGAGAGGCGAC+TGG + chr7_1:59977118-59977137 Msa1027540:CDS 50.0%
GCACGTTCTTCCCACATACA+AGG - chr7_1:59977259-59977278 None:intergenic 50.0%
! TGTGGTGGTGCTTTCTTTCC+AGG + chr7_1:59978307-59978326 Msa1027540:intron 50.0%
TTGCCCAGGTATGATGAGGT+TGG - chr7_1:59978481-59978500 None:intergenic 50.0%
AGGGTGAGGGTTAGGGTTAG+GGG - chr7_1:59973501-59973520 None:intergenic 55.0%
GAGGGTGAGGGTTAGGGTTA+GGG - chr7_1:59973502-59973521 None:intergenic 55.0%
TGAGGGTGAGGGTTAGGGTT+AGG - chr7_1:59973503-59973522 None:intergenic 55.0%
GTGGATGAGGATGAGGGTGA+GGG - chr7_1:59973520-59973539 None:intergenic 55.0%
!! GATGGTGGTGGTGGTGATCT+AGG - chr7_1:59973644-59973663 None:intergenic 55.0%
GATGAAGAGGAGCAGGTGGA+GGG - chr7_1:59973712-59973731 None:intergenic 55.0%
TGATGAAGAGGAGCAGGTGG+AGG - chr7_1:59973713-59973732 None:intergenic 55.0%
ATGGTAGGGGTAAGAGGGTG+GGG - chr7_1:59973750-59973769 None:intergenic 55.0%
CATGGTAGGGGTAAGAGGGT+GGG - chr7_1:59973751-59973770 None:intergenic 55.0%
ACATGGTAGGGGTAAGAGGG+TGG - chr7_1:59973752-59973771 None:intergenic 55.0%
TACCCCTACCATGTTCCTCC+AGG + chr7_1:59973758-59973777 Msa1027540:CDS 55.0%
ACCCCTACCATGTTCCTCCA+GGG + chr7_1:59973759-59973778 Msa1027540:CDS 55.0%
TCCCTGGAGGAACATGGTAG+GGG - chr7_1:59973763-59973782 None:intergenic 55.0%
CTCCCTGGAGGAACATGGTA+GGG - chr7_1:59973764-59973783 None:intergenic 55.0%
ACTCCCTGGAGGAACATGGT+AGG - chr7_1:59973765-59973784 None:intergenic 55.0%
GATGACTCCCTGGAGGAACA+TGG - chr7_1:59973769-59973788 None:intergenic 55.0%
GGACTATGATGACTCCCTGG+AGG - chr7_1:59973776-59973795 None:intergenic 55.0%
GGAGGACTATGATGACTCCC+TGG - chr7_1:59973779-59973798 None:intergenic 55.0%
AAAGGTTGACCTGCAGCTGC+AGG - chr7_1:59974100-59974119 None:intergenic 55.0%
TACCTGAGTTCACCCGACTC+GGG - chr7_1:59974216-59974235 None:intergenic 55.0%
CTACCTGAGTTCACCCGACT+CGG - chr7_1:59974217-59974236 None:intergenic 55.0%
CAAGCGGCGAGCTTGACTTA+TGG - chr7_1:59975001-59975020 None:intergenic 55.0%
GGTCGGTGTGGCACAAAGTT+AGG + chr7_1:59975037-59975056 Msa1027540:CDS 55.0%
! GCTGCTTTGTCCTCGTAGTG+CGG + chr7_1:59975665-59975684 Msa1027540:CDS 55.0%
CTGCTTTGTCCTCGTAGTGC+GGG + chr7_1:59975666-59975685 Msa1027540:CDS 55.0%
!!! TGTCGTTTTCCCGCACTACG+AGG - chr7_1:59975678-59975697 None:intergenic 55.0%
GTGCGGGAAAACGACATAGC+TGG + chr7_1:59975682-59975701 Msa1027540:CDS 55.0%
GACAACCACCAGTGTTACCC+TGG - chr7_1:59976722-59976741 None:intergenic 55.0%
AAATCATGCCACGGCTCCCT+TGG - chr7_1:59976744-59976763 None:intergenic 55.0%
GGAACACCTTCTGGCCACAT+TGG - chr7_1:59977654-59977673 None:intergenic 55.0%
!! TGGCCAGAAGGTGTTCCAAC+AGG + chr7_1:59977657-59977676 Msa1027540:CDS 55.0%
! TGTGGACTATTTGCTGGGGG+AGG - chr7_1:59978176-59978195 None:intergenic 55.0%
GAGCCTTGAATGCGTGCGAA+AGG + chr7_1:59978761-59978780 Msa1027540:CDS 55.0%
GAAGAGTTCCCTGATGTCGG+AGG + chr7_1:59978912-59978931 Msa1027540:CDS 55.0%
GGGTGAGGGTTAGGGTTAGG+GGG - chr7_1:59973500-59973519 None:intergenic 60.0%
GAGGGTGAGGGTGAGGGTTA+GGG - chr7_1:59973508-59973527 None:intergenic 60.0%
TGAGGGTGAGGGTGAGGGTT+AGG - chr7_1:59973509-59973528 None:intergenic 60.0%
GAGGATGAGGGTGAGGGTGA+GGG - chr7_1:59973514-59973533 None:intergenic 60.0%
TGAGGATGAGGGTGAGGGTG+AGG - chr7_1:59973515-59973534 None:intergenic 60.0%
GGTGGATGAGGATGAGGGTG+AGG - chr7_1:59973521-59973540 None:intergenic 60.0%
ACGCGGATAAGCAGACGGCT+TGG - chr7_1:59974008-59974027 None:intergenic 60.0%
GCCGTCTGCTTATCCGCGTT+TGG + chr7_1:59974009-59974028 Msa1027540:CDS 60.0%
CGATGATCCCCAACCGGAGA+AGG - chr7_1:59974191-59974210 None:intergenic 60.0%
CGGGTACGATGATCCCCAAC+CGG - chr7_1:59974197-59974216 None:intergenic 60.0%
GGGGATCATCGTACCCGAGT+CGG + chr7_1:59974200-59974219 Msa1027540:CDS 60.0%
GGGATCATCGTACCCGAGTC+GGG + chr7_1:59974201-59974220 Msa1027540:CDS 60.0%
TACCCGAGTCGGGTGAACTC+AGG + chr7_1:59974211-59974230 Msa1027540:CDS 60.0%
TCCAAGAGAGGCGACTGGCA+AGG + chr7_1:59977123-59977142 Msa1027540:CDS 60.0%
ACCTTGCCAGTCGCCTCTCT+TGG - chr7_1:59977127-59977146 None:intergenic 60.0%
GCGCCTGTTGGAACACCTTC+TGG - chr7_1:59977663-59977682 None:intergenic 60.0%
CTTTGTGTGGCAGCGCCTGT+TGG - chr7_1:59977675-59977694 None:intergenic 60.0%
! CAACAGGCGCTGCCACACAA+AGG + chr7_1:59977673-59977692 Msa1027540:CDS 60.0%
CGCACGCATTCAAGGCTCTC+AGG - chr7_1:59978759-59978778 None:intergenic 60.0%
GGGTAAGAGGGTGGGGCTGA+GGG - chr7_1:59973743-59973762 None:intergenic 65.0%
GCGATGCAGGAGGAGTTGGC+TGG - chr7_1:59974069-59974088 None:intergenic 65.0%
GGAGGCGATGCAGGAGGAGT+TGG - chr7_1:59974073-59974092 None:intergenic 65.0%
TGACCTGCAGCTGCAGGAGC+TGG - chr7_1:59974094-59974113 None:intergenic 65.0%
GTGGTTGTCCAAGGGAGCCG+TGG + chr7_1:59976733-59976752 Msa1027540:CDS 65.0%
GGGGTAAGAGGGTGGGGCTG+AGG - chr7_1:59973744-59973763 None:intergenic 70.0%
GGAGCTGGAGGCGATGCAGG+AGG - chr7_1:59974079-59974098 None:intergenic 70.0%
GCAGGAGCTGGAGGCGATGC+AGG - chr7_1:59974082-59974101 None:intergenic 70.0%
CCTGCAGCTGCAGGAGCTGG+AGG - chr7_1:59974091-59974110 None:intergenic 70.0%
CCTCCAGCTCCTGCAGCTGC+AGG + chr7_1:59974088-59974107 Msa1027540:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 59972924 59979307 59972924 ID=Msa1027540;Name=Msa1027540
chr7_1 mRNA 59972924 59979307 59972924 ID=Msa1027540-mRNA-1;Parent=Msa1027540;Name=Msa1027540-mRNA-1;_AED=0.03;_eAED=0.03;_QI=522|1|1|1|1|1|10|324|1114
chr7_1 exon 59972924 59975194 59972924 ID=Msa1027540-mRNA-1:exon:12297;Parent=Msa1027540-mRNA-1
chr7_1 exon 59975600 59975716 59975600 ID=Msa1027540-mRNA-1:exon:12298;Parent=Msa1027540-mRNA-1
chr7_1 exon 59976072 59976266 59976072 ID=Msa1027540-mRNA-1:exon:12299;Parent=Msa1027540-mRNA-1
chr7_1 exon 59976723 59976968 59976723 ID=Msa1027540-mRNA-1:exon:12300;Parent=Msa1027540-mRNA-1
chr7_1 exon 59977076 59977144 59977076 ID=Msa1027540-mRNA-1:exon:12301;Parent=Msa1027540-mRNA-1
chr7_1 exon 59977254 59977401 59977254 ID=Msa1027540-mRNA-1:exon:12302;Parent=Msa1027540-mRNA-1
chr7_1 exon 59977562 59977710 59977562 ID=Msa1027540-mRNA-1:exon:12303;Parent=Msa1027540-mRNA-1
chr7_1 exon 59978017 59978196 59978017 ID=Msa1027540-mRNA-1:exon:12304;Parent=Msa1027540-mRNA-1
chr7_1 exon 59978329 59978526 59978329 ID=Msa1027540-mRNA-1:exon:12305;Parent=Msa1027540-mRNA-1
chr7_1 exon 59978690 59979307 59978690 ID=Msa1027540-mRNA-1:exon:12306;Parent=Msa1027540-mRNA-1
chr7_1 five_prime_UTR 59972924 59973445 59972924 ID=Msa1027540-mRNA-1:five_prime_utr;Parent=Msa1027540-mRNA-1
chr7_1 CDS 59973446 59975194 59973446 ID=Msa1027540-mRNA-1:cds;Parent=Msa1027540-mRNA-1
chr7_1 CDS 59975600 59975716 59975600 ID=Msa1027540-mRNA-1:cds;Parent=Msa1027540-mRNA-1
chr7_1 CDS 59976072 59976266 59976072 ID=Msa1027540-mRNA-1:cds;Parent=Msa1027540-mRNA-1
chr7_1 CDS 59976723 59976968 59976723 ID=Msa1027540-mRNA-1:cds;Parent=Msa1027540-mRNA-1
chr7_1 CDS 59977076 59977144 59977076 ID=Msa1027540-mRNA-1:cds;Parent=Msa1027540-mRNA-1
chr7_1 CDS 59977254 59977401 59977254 ID=Msa1027540-mRNA-1:cds;Parent=Msa1027540-mRNA-1
chr7_1 CDS 59977562 59977710 59977562 ID=Msa1027540-mRNA-1:cds;Parent=Msa1027540-mRNA-1
chr7_1 CDS 59978017 59978196 59978017 ID=Msa1027540-mRNA-1:cds;Parent=Msa1027540-mRNA-1
chr7_1 CDS 59978329 59978526 59978329 ID=Msa1027540-mRNA-1:cds;Parent=Msa1027540-mRNA-1
chr7_1 CDS 59978690 59978983 59978690 ID=Msa1027540-mRNA-1:cds;Parent=Msa1027540-mRNA-1
chr7_1 three_prime_UTR 59978984 59979307 59978984 ID=Msa1027540-mRNA-1:three_prime_utr;Parent=Msa1027540-mRNA-1
Gene Sequence

>Msa1027540

ATGGATAATAACTATGGTTATCCATATAGGTATCCAAACCCTTATATGTATCCCCCTAACCCTAACCCTCACCCTCACCCTCATCCTCATCCACCATATCCACCTCAAGATCCATATGCACATTCTCATACTCATCATGCTCCTCCTTATCCATATCCTTACATTTCTTCACATTCCTTAAACTATTCTTCCTATCCTAGATCACCACCACCACCATCATCATCATCATCATCAAATTCTACTGCACCATTTGATTATGCATACCCTCCACCTGCTCCTCTTCATCAATTAGTACCCTCAGCCCCACCCTCTTACCCCTACCATGTTCCTCCAGGGAGTCATCATAGTCCTCCTCAACATTCCCTTTCACACTCACACCATGCTAGCTTATTACAACATGGATCATCCTCTCAGTATTATTATTATCAACAAAATACTACTCATGAAGACCGTCCTGATCTTCATTCGCGTCATAATAGCTTCTCTGGTCCTTACTGGCCAGATACATCAAGTTCAACAGCAGGTGGTGGAGTATCACAAACTAGTGGTGGTGATAATTCCAAGCCGTCTGCTTATCCGCGTTTGGATGATCTAATGAACAATGTTAGGTTGTCTGATAACCAGCCAACTCCTCCTGCATCGCCTCCAGCTCCTGCAGCTGCAGGTCAACCTTTTATGCATTCGATTTCGGTATCAAAGTTGCAACAGAAGAAGGAGGATTTTTATGGACATTCGAATAACTCCTTCTCCGGTTGGGGATCATCGTACCCGAGTCGGGTGAACTCAGGTAGACTTTCGGTTTCGGATTATTCTGGCTCATTTAACGGATCAATGCATAGTCAGAGCATGCAGATTGTTCCGGTGCAGAATAAAGGGTCCTTGAGAGTTTTGCTCCTTCATGGAAATTTAGATATATGGGTTCATGAAGCCAAGAATCTTCCAAATATGGACATGTTCCACAAAACATTGGGGGATATGTTTGGAAAATTACCTGGTAGTGTGAGCAATAAAATTGAAGGAACAATGAATAAGAAGATTACCAGTGATCCTTATGTTTCGATTTCAGTGGCAAATGCGGTAATTGGGAGGACTTTTGTGATTAGCAATTCTGAAAACCCTGTTTGGAGTCAACACTTCTATGTTCCTGTTGCACATAATGCTGCTGAAGTGCACTTTTATGTTAAAGACAGTGATGTTGTGGGTTCACAGCTCATTGGTACTGTGGCAATTCCAGTGGAACAAATATACTCAGGGGCAATAGTTCAGGGAACTTACCCTATACTGAATAATAATGGGAAGCCTTATAAGCAAGGTGCTGCACTGAGCCTATCCATTCAGTACATCCCAATGGAGCAATTGAGCTTTTATCATCAAGGAGTTGGAGCAGGGCCTGAATATATTGGCGTTCCTGCCACTTATTTTCCTTTGAGGAAAGGGGGAAATGTTACTCTATATCAAGATGCTCATGTTCCAGATGGTACCCTCCCTAATGTGTTGCTTGATAGTGGGATGTTTTATGTGCATGGAAAGTGTTGGCATGACATATTTGATGCCATAAGTCAAGCTCGCCGCTTGATATATATTACAGGATGGTCGGTGTGGCACAAAGTTAGGTTGATAAGGGATGCCGGTTACCCATCCGATTATACCTTAGGTGATCTTCTGAAGACAAAGTCACAAGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGATGATCCTACATCAAGAAGTATTTTGGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTAGGCGGTTTTTCAAGCATTCATCAGTCCATGTGCTGCTTTGTCCTCGTAGTGCGGGAAAACGACATAGCTGGGTCAAGCAAAGGGAAGTTGGAACTATATATACACATCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATAACAGAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTATGTGATGGCCGATATGATACTCCTCACCATCCTCTCTTTAAGACATTACAAACAATACATAAGGATGATTATCACAACCCAACTTTCACGGGTAACACTGGTGGTTGTCCAAGGGAGCCGTGGCATGATTTGCATTCTAAAATTGATGGTCCGGCAGCTTATGATGTCTTAACTAACTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCACAGGGGATAAAGAAGTTGAAAATTTCATATGATGATGCTTTACTCAGACTGGAAAGAATTCCAGATGTTATTGGCATTAACGACACTCCTAGTGGTGAGAATGATCCTGAATCATGGCATGTTCAGATATTTCGCTCAATTGATTCAAGTTCTGTTAAGGGATTTCCAAAAGATCCAAGAGAGGCGACTGGCAAGAACCTTGTATGTGGGAAGAACGTGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCTATTCGTGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATCGGCTCTTCTTACAATTGGAGTCAACATAAGGACCTTGGCGCTAATAATTTAATTCCAATGGAAATTGCTCTAAAGATTGCGGAAAAGATTAAAGCAAATGAAAGGTTTGCAGTTTATATAGTAATTCCAATGTGGCCAGAAGGTGTTCCAACAGGCGCTGCCACACAAAGGATTCTATTCTGGCAGAACAAAACAATGCAAATGATGTATGAGACAATTTCAAAGGCTTTGGTTGAAGCTGGGCTTGAAGCCGCATTCTCTGTGCAAGACTATTTGAACTTTTTCTGTCTTGGTAATCGAGAGGCCATAAATATCTACGAAAATATCAGTGTGTCGGGAAATCCTCCCCCAGCAAATAGTCCACAAGCAAATAGTCGAAATAGTCGACGTTTTATGATATATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTCATAGTGGGCTCCGCGAACATTAACCAACGCTCTATGGAAGGAACAAGGGACAGTGAGATTGCAATGGGAGCATACCAACCTCATCATACCTGGGCAAGAAAACATTCCTATCCACTTGGACAAATCCATGGATATAGGATGTCACTTTGGGCAGAACATACTGGAACAATTGATGACTGCTTCTTGCAACCTGAGAGCCTTGAATGCGTGCGAAAGGTTAGAGCAATTGGTGAAATGAACTGGAAGCAATTTGCAGCAAATGATGTGACAGAGATGAGAGGGCATCTATTAAAATACCCTGTAGAAGTTGATCGAAAGGGGAAAGTCAGATCACTTCCCAGTCATGAAGAGTTCCCTGATGTCGGAGGAAAAATTGTTGGATCATTTCTTGCCATGAAGGAGAATCTTACCATTTGA
Protein sequence

>Msa1027540

MDNNYGYPYRYPNPYMYPPNPNPHPHPHPHPPYPPQDPYAHSHTHHAPPYPYPYISSHSLNYSSYPRSPPPPSSSSSSNSTAPFDYAYPPPAPLHQLVPSAPPSYPYHVPPGSHHSPPQHSLSHSHHASLLQHGSSSQYYYYQQNTTHEDRPDLHSRHNSFSGPYWPDTSSSTAGGGVSQTSGGDNSKPSAYPRLDDLMNNVRLSDNQPTPPASPPAPAAAGQPFMHSISVSKLQQKKEDFYGHSNNSFSGWGSSYPSRVNSGRLSVSDYSGSFNGSMHSQSMQIVPVQNKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGSVSNKIEGTMNKKITSDPYVSISVANAVIGRTFVISNSENPVWSQHFYVPVAHNAAEVHFYVKDSDVVGSQLIGTVAIPVEQIYSGAIVQGTYPILNNNGKPYKQGAALSLSIQYIPMEQLSFYHQGVGAGPEYIGVPATYFPLRKGGNVTLYQDAHVPDGTLPNVLLDSGMFYVHGKCWHDIFDAISQARRLIYITGWSVWHKVRLIRDAGYPSDYTLGDLLKTKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVHVLLCPRSAGKRHSWVKQREVGTIYTHHQKTVIVDADAGNNRRKIVAFVGGLDLCDGRYDTPHHPLFKTLQTIHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPQGIKKLKISYDDALLRLERIPDVIGINDTPSGENDPESWHVQIFRSIDSSSVKGFPKDPREATGKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETISKALVEAGLEAAFSVQDYLNFFCLGNREAINIYENISVSGNPPPANSPQANSRNSRRFMIYVHSKGMIVDDEYVIVGSANINQRSMEGTRDSEIAMGAYQPHHTWARKHSYPLGQIHGYRMSLWAEHTGTIDDCFLQPESLECVRKVRAIGEMNWKQFAANDVTEMRGHLLKYPVEVDRKGKVRSLPSHEEFPDVGGKIVGSFLAMKENLTI*