Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1112440 | XP_039683565.1 | 95.018 | 823 | 13 | 2 | 1 | 816 | 1 | 802 | 0.0 | 1601 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1112440 | sp|A6QLK4|TMM8B_BOVIN | 25.735 | 408 | 257 | 14 | 410 | 803 | 65 | 440 | 1.44e-16 | 87.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1112440 | A0A396H0V0 | 95.018 | 823 | 13 | 2 | 1 | 816 | 1 | 802 | 0.0 | 1601 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1028330 | Msa1112440 | 0.817307 | 3.529376e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1112440 | MtrunA17_Chr7g0248071 | 95.018 | 823 | 13 | 2 | 1 | 816 | 1 | 802 | 0.0 | 1601 |
| Msa1112440 | MtrunA17_Chr8g0348621 | 67.647 | 816 | 225 | 7 | 14 | 814 | 31 | 822 | 0.0 | 1137 |
| Msa1112440 | MtrunA17_Chr2g0310481 | 86.538 | 52 | 6 | 1 | 1 | 52 | 1 | 51 | 4.81e-21 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1112440 | AT2G46060.1 | 50.422 | 829 | 327 | 16 | 21 | 815 | 29 | 807 | 0.0 | 824 |
| Msa1112440 | AT2G46060.3 | 49.698 | 829 | 327 | 17 | 21 | 815 | 29 | 801 | 0.0 | 804 |
| Msa1112440 | AT2G46060.2 | 49.553 | 783 | 312 | 15 | 21 | 770 | 29 | 761 | 0.0 | 768 |
Find 214 sgRNAs with CRISPR-Local
Find 548 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTTCAAAGTTATGTTTA+AGG | 0.167142 | 7_3:+58427401 | None:intergenic |
| AGAGAAGGCACTTGGGGTTT+TGG | 0.205366 | 7_3:-58424184 | Msa1112440:CDS |
| TGGAATAGGTTGGTGTAAAA+AGG | 0.224338 | 7_3:-58421011 | Msa1112440:three_prime_UTR |
| GTTGCAGAGGTGAATCATTT+TGG | 0.225633 | 7_3:-58420988 | Msa1112440:three_prime_UTR |
| TTCTATATCTAACCACTTCT+TGG | 0.230614 | 7_3:+58421043 | None:intergenic |
| CATTTGGACTTACTTACTTT+TGG | 0.232007 | 7_3:-58424422 | Msa1112440:CDS |
| AAGCGTTTCAATGGGGAAAT+TGG | 0.254909 | 7_3:+58424480 | None:intergenic |
| GGTGCGCTTGGTCTCCTAAT+TGG | 0.263594 | 7_3:-58421928 | Msa1112440:CDS |
| TAGATATAGAATAATATAAA+TGG | 0.269303 | 7_3:-58421031 | Msa1112440:three_prime_UTR |
| GTTATTCATTCACCATTAAT+TGG | 0.269868 | 7_3:-58424817 | Msa1112440:CDS |
| GGACTTCTGGCTCTCTTTCA+TGG | 0.277126 | 7_3:-58422216 | Msa1112440:CDS |
| CGGCCATACTTCCAGCCTAT+TGG | 0.282755 | 7_3:-58422489 | Msa1112440:CDS |
| TTGAAACCAGTGAAACTTAC+TGG | 0.290774 | 7_3:-58421288 | Msa1112440:CDS |
| TAGATATCCATTGTACAATT+TGG | 0.292492 | 7_3:+58424679 | None:intergenic |
| TATTATTTACCGGTTGGTTC+TGG | 0.295198 | 7_3:-58424520 | Msa1112440:CDS |
| TTGTTTATGCCATTCTTTAT+AGG | 0.298946 | 7_3:-58420662 | Msa1112440:three_prime_UTR |
| CCAGTGAAACTTACTGGTTT+TGG | 0.300042 | 7_3:-58421282 | Msa1112440:CDS |
| CCATCTCTAAAGCATATTAT+TGG | 0.303435 | 7_3:+58427444 | None:intergenic |
| CCGTGAGAGGAACAATGTTT+TGG | 0.309413 | 7_3:+58424085 | None:intergenic |
| GGCCATACTTCCAGCCTATT+GGG | 0.316141 | 7_3:-58422488 | Msa1112440:CDS |
| ATGTACCAACGACCAATTAA+TGG | 0.320447 | 7_3:+58424805 | None:intergenic |
| TGCATTTGTTACAGCCATTA+GGG | 0.322397 | 7_3:+58422109 | None:intergenic |
| CTTTGAATCATATTATTTAC+CGG | 0.324268 | 7_3:-58424530 | Msa1112440:CDS |
| GATTGCCGTCTCTTATTAGC+TGG | 0.326372 | 7_3:-58424309 | Msa1112440:CDS |
| TGCTATCCTTACTGCCCTAA+TGG | 0.328724 | 7_3:-58422123 | Msa1112440:CDS |
| TATGAAGTTTATGCTAGATT+TGG | 0.330454 | 7_3:-58424334 | Msa1112440:CDS |
| TCTTACAGTTCATGGACTTC+TGG | 0.332012 | 7_3:-58422229 | Msa1112440:CDS |
| AAGCATACTGACTGCTGAAT+TGG | 0.340422 | 7_3:-58420777 | Msa1112440:three_prime_UTR |
| TTCTTTATAACTTACTTAGA+TGG | 0.345480 | 7_3:-58420459 | Msa1112440:three_prime_UTR |
| ACTCTATAACCCATCCAATT+AGG | 0.350206 | 7_3:+58421914 | None:intergenic |
| TTGCATTTGTTACAGCCATT+AGG | 0.351997 | 7_3:+58422108 | None:intergenic |
| CTATAATGTCTTACAGTTCA+TGG | 0.354544 | 7_3:-58422237 | Msa1112440:CDS |
| TTCAGATATCTCCAGGTGTT+TGG | 0.356009 | 7_3:-58426023 | Msa1112440:intron |
| AGTTCATAGTTTGCATTTGC+AGG | 0.362265 | 7_3:+58421085 | None:intergenic |
| CGCTTGGTCTCCTAATTGGA+TGG | 0.363372 | 7_3:-58421924 | Msa1112440:CDS |
| CTGCTCTTCAATCTTCATAA+TGG | 0.367154 | 7_3:-58420502 | Msa1112440:three_prime_UTR |
| ATGACAGTTGGCCCTTTAGA+AGG | 0.371907 | 7_3:+58424130 | None:intergenic |
| GCATGCTTCCACGGTTATAT+TGG | 0.373785 | 7_3:+58425206 | None:intergenic |
| TAGAATAATATAAATGGAAT+AGG | 0.375860 | 7_3:-58421025 | Msa1112440:three_prime_UTR |
| AAAGTTATGTTTAAGGGATC+TGG | 0.378645 | 7_3:+58427408 | None:intergenic |
| CAATGCTCGGTTGGGAAGGC+TGG | 0.386684 | 7_3:-58424703 | Msa1112440:CDS |
| TGATGTCAATAATGCTTTGA+AGG | 0.391225 | 7_3:-58425118 | Msa1112440:CDS |
| TCTTTCAAAGTTATGTTTAA+GGG | 0.393277 | 7_3:+58427402 | None:intergenic |
| CTTCTGCCGAAGGGCCCAAT+AGG | 0.393885 | 7_3:+58422474 | None:intergenic |
| TTTGATTTGCGCTATATAAG+AGG | 0.394863 | 7_3:-58429092 | Msa1112440:intron |
| AAAGTATCTCATATTACATA+AGG | 0.395516 | 7_3:-58427696 | Msa1112440:intron |
| TCTCCAGGTGTTTGGTTCGT+TGG | 0.400045 | 7_3:-58426015 | Msa1112440:CDS |
| CGATGGCTATGTAATCTTGT+TGG | 0.401971 | 7_3:-58421391 | Msa1112440:CDS |
| GCTGAAGCTGGAAACAATAA+AGG | 0.403369 | 7_3:+58429139 | None:intergenic |
| GTGCTTCTTCTCTCTGCAAA+TGG | 0.407530 | 7_3:-58429185 | Msa1112440:CDS |
| TAGCCGCAAAATTGACTCCT+AGG | 0.408128 | 7_3:+58420742 | None:intergenic |
| CGGTGCTTTATTTAAATCAC+TGG | 0.409511 | 7_3:+58424843 | None:intergenic |
| ATGGAGAACCTGGTAACATT+TGG | 0.415393 | 7_3:-58424438 | Msa1112440:CDS |
| GGCAGAAGAATTTACAGTTA+TGG | 0.416253 | 7_3:-58424983 | Msa1112440:CDS |
| AAAGGTTTCACCTTTACTGC+TGG | 0.422733 | 7_3:+58429157 | None:intergenic |
| GTTACTCAAAAGCGTTTCAA+TGG | 0.424131 | 7_3:+58424471 | None:intergenic |
| TAATGTGACGGCTTGCTATT+CGG | 0.427071 | 7_3:-58424743 | Msa1112440:CDS |
| GAAGTTTATGCTAGATTTGG+TGG | 0.427171 | 7_3:-58424331 | Msa1112440:CDS |
| GTTGTTCTTGTGATAGTGAT+TGG | 0.428134 | 7_3:-58421949 | Msa1112440:CDS |
| ATCTTCGACTGTGTCCTTGT+AGG | 0.428732 | 7_3:+58425973 | None:intergenic |
| GACATTCCTCGTGGTGCAGC+CGG | 0.429931 | 7_3:-58424400 | Msa1112440:CDS |
| ATATCCAAGGAGAAGATGTT+TGG | 0.432598 | 7_3:+58425015 | None:intergenic |
| ATTTAATCTCAAAGCATCTA+TGG | 0.433515 | 7_3:-58420840 | Msa1112440:three_prime_UTR |
| TGCCGAAGGGCCCAATAGGC+TGG | 0.433551 | 7_3:+58422478 | None:intergenic |
| GGCCCAATAGGCTGGAAGTA+TGG | 0.435124 | 7_3:+58422486 | None:intergenic |
| TTGAAAGATTCAGCTGTCTC+AGG | 0.445400 | 7_3:-58427387 | Msa1112440:intron |
| AAATGTGTGGCTAACGGTAT+TGG | 0.445673 | 7_3:-58420912 | Msa1112440:three_prime_UTR |
| TTCCAGCCTATTGGGCCCTT+CGG | 0.447178 | 7_3:-58422480 | Msa1112440:CDS |
| ATTATTGGCAGTGTGCTCAT+TGG | 0.449159 | 7_3:+58427459 | None:intergenic |
| CCAAAACCAGTAAGTTTCAC+TGG | 0.452703 | 7_3:+58421282 | None:intergenic |
| TATGCAGGCATTAGCAGAAT+GGG | 0.454415 | 7_3:-58422333 | Msa1112440:intron |
| ACAACTTCAAACAAAACAAC+TGG | 0.454544 | 7_3:-58424937 | Msa1112440:CDS |
| TTCTTGGAAGTGAGTCCTGA+TGG | 0.454875 | 7_3:+58421059 | None:intergenic |
| GTGCATGAGAACGGATAAAC+TGG | 0.457665 | 7_3:+58425147 | None:intergenic |
| TTACTCAAAAGCGTTTCAAT+GGG | 0.462101 | 7_3:+58424472 | None:intergenic |
| ATCCCACATGCTTCAATGCT+CGG | 0.462865 | 7_3:-58424716 | Msa1112440:CDS |
| GATGGCTATGTAATCTTGTT+GGG | 0.463410 | 7_3:-58421390 | Msa1112440:CDS |
| AATGGATATCTACATGCTTC+AGG | 0.463528 | 7_3:-58424668 | Msa1112440:intron |
| CTTCAGTTGATTTGCCGCCA+TGG | 0.464371 | 7_3:-58427802 | Msa1112440:intron |
| AGTATGAGGGTAGCTGAAGC+TGG | 0.470065 | 7_3:+58429127 | None:intergenic |
| TGAGATTAAATGTACCTTAG+CGG | 0.472168 | 7_3:+58420852 | None:intergenic |
| GTAAATTATCCTATAAAGAA+TGG | 0.476215 | 7_3:+58420653 | None:intergenic |
| AGATATCAAAGTAGAAGAAT+CGG | 0.477956 | 7_3:+58427727 | None:intergenic |
| AAGTGAGAATCTAACTGAAA+AGG | 0.479835 | 7_3:+58421867 | None:intergenic |
| AGCAGAAGTGATCCTTCTAA+AGG | 0.480937 | 7_3:-58424142 | Msa1112440:CDS |
| ACATGCTTCAATGCTCGGTT+GGG | 0.484188 | 7_3:-58424711 | Msa1112440:CDS |
| CAAAACATTGTTCCTCTCAC+GGG | 0.486063 | 7_3:-58424084 | Msa1112440:CDS |
| ATTATTGTTCAGATATCTCC+AGG | 0.488018 | 7_3:-58426030 | Msa1112440:intron |
| GTGATAGTGATTGGTGCGCT+TGG | 0.488077 | 7_3:-58421940 | Msa1112440:CDS |
| TGCCACATTTATTATATCCA+AGG | 0.490311 | 7_3:+58425002 | None:intergenic |
| GGATGTGTCTAAAATTGAAA+AGG | 0.490634 | 7_3:-58427484 | Msa1112440:CDS |
| ATAATATAAATGGAATAGGT+TGG | 0.491622 | 7_3:-58421021 | Msa1112440:three_prime_UTR |
| ATGCTATATGATTCAAGTGA+TGG | 0.495005 | 7_3:-58424235 | Msa1112440:CDS |
| AAGGGTCTGAGTCTAGTATG+AGG | 0.499212 | 7_3:+58429113 | None:intergenic |
| CTATTGGGCCCTTCGGCAGA+AGG | 0.501313 | 7_3:-58422473 | Msa1112440:intron |
| TCTTATATAGCGCAAATCAA+AGG | 0.503251 | 7_3:+58429094 | None:intergenic |
| GGTAAATAATATGATTCAAA+GGG | 0.504101 | 7_3:+58424532 | None:intergenic |
| GCAGAAGTGATCCTTCTAAA+GGG | 0.504200 | 7_3:-58424141 | Msa1112440:CDS |
| CAAAGGAGTACGCTGGGCCT+CGG | 0.505040 | 7_3:+58425232 | None:intergenic |
| GAATCATATTATTTACCGGT+TGG | 0.505074 | 7_3:-58424526 | Msa1112440:CDS |
| CACATGCTTCAATGCTCGGT+TGG | 0.505406 | 7_3:-58424712 | Msa1112440:CDS |
| GATGTGAATCGGTGTATGTT+CGG | 0.508042 | 7_3:-58420890 | Msa1112440:three_prime_UTR |
| TTACAGCCATTAGGGCAGTA+AGG | 0.511402 | 7_3:+58422117 | None:intergenic |
| TGTACCAAACATCTTCTCCT+TGG | 0.513174 | 7_3:-58425019 | Msa1112440:CDS |
| TAGTCCACTCGCAATTCCAC+TGG | 0.514433 | 7_3:+58422298 | None:intergenic |
| AAACTATGAACTGACCCATC+AGG | 0.514878 | 7_3:-58421074 | Msa1112440:CDS |
| CACGGTTATATTGGCACCAA+AGG | 0.516060 | 7_3:+58425215 | None:intergenic |
| TGAATTTGTGCATGCTTCCA+CGG | 0.517162 | 7_3:+58425197 | None:intergenic |
| CGGTAAATAATATGATTCAA+AGG | 0.517726 | 7_3:+58424531 | None:intergenic |
| CTTATATAGCGCAAATCAAA+GGG | 0.517881 | 7_3:+58429095 | None:intergenic |
| ATGTTTAAGGGATCTGGCAG+TGG | 0.518366 | 7_3:+58427414 | None:intergenic |
| CAAGTGGCTTGACATCATAC+AGG | 0.520816 | 7_3:-58424039 | Msa1112440:intron |
| TTTCAAGAGATTGACGCAGA+TGG | 0.522652 | 7_3:+58429272 | None:intergenic |
| TGGAAGTATGGCCGCAACAT+TGG | 0.526008 | 7_3:+58422498 | None:intergenic |
| GCTTCAATGCTCGGTTGGGA+AGG | 0.526249 | 7_3:-58424707 | Msa1112440:CDS |
| TTCAAGAGATTGACGCAGAT+GGG | 0.530500 | 7_3:+58429273 | None:intergenic |
| AGAATCTAACTGAAAAGGAA+AGG | 0.536387 | 7_3:+58421872 | None:intergenic |
| TTGTTCGAAAGTAAATATTG+TGG | 0.536774 | 7_3:-58421125 | Msa1112440:CDS |
| GACAAAATGTACATTCGCAA+TGG | 0.538024 | 7_3:-58420806 | Msa1112440:three_prime_UTR |
| TGCACAAATTCAATGATGAC+AGG | 0.538072 | 7_3:-58425186 | Msa1112440:CDS |
| TTATGCAGGCATTAGCAGAA+TGG | 0.538121 | 7_3:-58422334 | Msa1112440:intron |
| CACTATCACAAGAACAACAT+TGG | 0.538925 | 7_3:+58421954 | None:intergenic |
| TTGCACATGAATATTTCCTC+CGG | 0.539229 | 7_3:+58424381 | None:intergenic |
| ATGCTTGTGACGTAGGTGCC+TGG | 0.539761 | 7_3:-58422271 | Msa1112440:CDS |
| TTTAGAAGGATCACTTCTGC+TGG | 0.540075 | 7_3:+58424144 | None:intergenic |
| ATTGCCGTCTCTTATTAGCT+GGG | 0.543487 | 7_3:-58424308 | Msa1112440:CDS |
| AATGGCGAATCCAGCAGTAA+AGG | 0.544911 | 7_3:-58429167 | Msa1112440:CDS |
| TGATTTAAATAAAGCACCGC+TGG | 0.545184 | 7_3:-58424839 | Msa1112440:CDS |
| TCTCACTTGATTTCTCTCAC+TGG | 0.546615 | 7_3:-58421852 | Msa1112440:intron |
| TATATTATGTATGCTAGAGA+AGG | 0.547379 | 7_3:-58424199 | Msa1112440:CDS |
| CCAAAACATTGTTCCTCTCA+CGG | 0.547717 | 7_3:-58424085 | Msa1112440:CDS |
| CGCTACAGTCAATGCCTCCA+TGG | 0.548791 | 7_3:+58423550 | None:intergenic |
| TCATCATACAATGGAGAACC+TGG | 0.550918 | 7_3:-58424448 | Msa1112440:CDS |
| ATTCACCATTAATTGGTCGT+TGG | 0.552432 | 7_3:-58424810 | Msa1112440:CDS |
| TGTATGCTAGAGAAGGCACT+TGG | 0.552444 | 7_3:-58424192 | Msa1112440:CDS |
| TAAGATGCTCCAGAACCAAC+CGG | 0.552929 | 7_3:+58424511 | None:intergenic |
| TCTCATTGTATCCAATGTTG+CGG | 0.553941 | 7_3:-58422509 | Msa1112440:CDS |
| CCAATAATATGCTTTAGAGA+TGG | 0.555133 | 7_3:-58427444 | Msa1112440:CDS |
| TGCTCTTGCGATCGAAACCA+TGG | 0.555905 | 7_3:-58423567 | Msa1112440:CDS |
| TACAGAAAACAACACAATGT+TGG | 0.557810 | 7_3:-58425094 | Msa1112440:CDS |
| ACCCTCAAAAGAATCAAACT+AGG | 0.558790 | 7_3:-58420632 | Msa1112440:three_prime_UTR |
| TGGCTGTAACAAATGCAACT+AGG | 0.561806 | 7_3:-58422103 | Msa1112440:intron |
| TAATATGATTCAAAGGGAGT+TGG | 0.562378 | 7_3:+58424538 | None:intergenic |
| GCTTGGTCTCCTAATTGGAT+GGG | 0.564484 | 7_3:-58421923 | Msa1112440:CDS |
| CCCTCAAAAGAATCAAACTA+GGG | 0.565312 | 7_3:-58420631 | Msa1112440:three_prime_UTR |
| ATAATTGATCTTCACATCTG+AGG | 0.565348 | 7_3:+58424354 | None:intergenic |
| CAATATTTACTTTCGAACAA+AGG | 0.566863 | 7_3:+58421128 | None:intergenic |
| ACAACTGGTGCAAATGATGT+TGG | 0.566879 | 7_3:-58424922 | Msa1112440:CDS |
| TGTCAATGGCAATAGTAAGC+TGG | 0.567566 | 7_3:-58421315 | Msa1112440:CDS |
| GAATCTAACTGAAAAGGAAA+GGG | 0.570118 | 7_3:+58421873 | None:intergenic |
| TAGAGTTGTCAACAAAGTAT+AGG | 0.570240 | 7_3:-58421897 | Msa1112440:CDS |
| TCTTGGAAGTGAGTCCTGAT+GGG | 0.571771 | 7_3:+58421060 | None:intergenic |
| CTCCTTGGATATAATAAATG+TGG | 0.573823 | 7_3:-58425004 | Msa1112440:CDS |
| TACAAGGACACAGTCGAAGA+TGG | 0.574104 | 7_3:-58425971 | Msa1112440:intron |
| TCAATGGCATTGGACCTACA+AGG | 0.574464 | 7_3:-58425987 | Msa1112440:CDS |
| AGGGATAAATGGTTTAGATG+TGG | 0.574841 | 7_3:-58427060 | Msa1112440:CDS |
| CTAAATATGATACAGTTCAA+AGG | 0.577819 | 7_3:+58420542 | None:intergenic |
| GTTGAAATTGTAACACATCA+AGG | 0.577942 | 7_3:-58423528 | Msa1112440:intron |
| TCAGATGTTGTGCATGAGAA+CGG | 0.579104 | 7_3:+58425138 | None:intergenic |
| TAACGGTATTGGATGTGAAT+CGG | 0.579480 | 7_3:-58420901 | Msa1112440:three_prime_UTR |
| AGACCAACGAACCAAACACC+TGG | 0.585817 | 7_3:+58426012 | None:intergenic |
| TGGCACCAAAGGAGTACGCT+GGG | 0.586049 | 7_3:+58425226 | None:intergenic |
| CAACCGAGCATTGAAGCATG+TGG | 0.587936 | 7_3:+58424713 | None:intergenic |
| ATTGGATTAGAAGTCATCCT+AGG | 0.588398 | 7_3:-58420759 | Msa1112440:three_prime_UTR |
| TGAGTGTTTACAAGATTGAT+CGG | 0.589023 | 7_3:+58424772 | None:intergenic |
| TTTAAGGGATCTGGCAGTGG+AGG | 0.590701 | 7_3:+58427417 | None:intergenic |
| ATTCCTCGTGGTGCAGCCGG+AGG | 0.591307 | 7_3:-58424397 | Msa1112440:CDS |
| CCACCTCTGCAGATTGTCCG+AGG | 0.593082 | 7_3:-58425249 | Msa1112440:intron |
| AAAGAACCACCTTCTGCCGA+AGG | 0.593285 | 7_3:+58422464 | None:intergenic |
| CACTCAGGATAGTAATGTGA+CGG | 0.595597 | 7_3:-58424755 | Msa1112440:CDS |
| GTATGCTAGAGAAGGCACTT+GGG | 0.596959 | 7_3:-58424191 | Msa1112440:CDS |
| AAATTTACAGTCCCCGTGAG+AGG | 0.597033 | 7_3:+58424072 | None:intergenic |
| AAGTAAGTCCAAATGTTACC+AGG | 0.599444 | 7_3:+58424430 | None:intergenic |
| CAGGACTCACTTCCAAGAAG+TGG | 0.607254 | 7_3:-58421055 | Msa1112440:CDS |
| ATAATATGCTTTAGAGATGG+AGG | 0.610438 | 7_3:-58427441 | Msa1112440:CDS |
| AGTGAAAGAGACATGACAGT+TGG | 0.612070 | 7_3:+58424118 | None:intergenic |
| TATGCTAGAGAAGGCACTTG+GGG | 0.613665 | 7_3:-58424190 | Msa1112440:CDS |
| GCAAGTGATGTCAAATTCAG+TGG | 0.620151 | 7_3:-58424961 | Msa1112440:CDS |
| TATTGATGAAGTATTGAAGA+GGG | 0.621132 | 7_3:-58422162 | Msa1112440:CDS |
| TAATCATACACAGTCACTGA+AGG | 0.621899 | 7_3:+58424868 | None:intergenic |
| TTGTTGGGTCACTTCTAAGA+CGG | 0.624830 | 7_3:-58421375 | Msa1112440:CDS |
| CTATATCATGCTTGTGACGT+AGG | 0.626047 | 7_3:-58422278 | Msa1112440:CDS |
| AGGGTCTGAGTCTAGTATGA+GGG | 0.629454 | 7_3:+58429114 | None:intergenic |
| GTGTAGACATTTGTACGGAG+AGG | 0.631642 | 7_3:-58424562 | Msa1112440:intron |
| TTGAGTAACTCATCATACAA+TGG | 0.631667 | 7_3:-58424457 | Msa1112440:CDS |
| TTGGCACCAAAGGAGTACGC+TGG | 0.632814 | 7_3:+58425225 | None:intergenic |
| GATCAATCTTGTAAACACTC+AGG | 0.633140 | 7_3:-58424770 | Msa1112440:CDS |
| TAGTCCCAGCTAATAAGAGA+CGG | 0.633150 | 7_3:+58424304 | None:intergenic |
| ACATCCAGTGGAATTGCGAG+TGG | 0.633673 | 7_3:-58422302 | Msa1112440:CDS |
| GGCTGGACCAAATTGTACAA+TGG | 0.634811 | 7_3:-58424686 | Msa1112440:CDS |
| CTATTGATGAAGTATTGAAG+AGG | 0.635652 | 7_3:-58422163 | Msa1112440:CDS |
| AACCGAGCATTGAAGCATGT+GGG | 0.636332 | 7_3:+58424714 | None:intergenic |
| AAAACTTTCTGTGCTCACGA+AGG | 0.643826 | 7_3:-58425042 | Msa1112440:CDS |
| GGCGAGTTCATGTGATGTGA+AGG | 0.644088 | 7_3:-58420943 | Msa1112440:three_prime_UTR |
| AAGAATCGGATATACTTACA+AGG | 0.646766 | 7_3:+58427741 | None:intergenic |
| GAGTTCATGTGATGTGAAGG+TGG | 0.649094 | 7_3:-58420940 | Msa1112440:three_prime_UTR |
| GTTTACAAGTGATAAAGCGA+TGG | 0.654151 | 7_3:-58421408 | Msa1112440:CDS |
| AAGAACCACCTTCTGCCGAA+GGG | 0.654922 | 7_3:+58422465 | None:intergenic |
| TATACTTACAAGGTCTACAT+CGG | 0.655461 | 7_3:+58427751 | None:intergenic |
| TGTGACGGCTTGCTATTCGG+TGG | 0.662495 | 7_3:-58424740 | Msa1112440:CDS |
| ATTATAGTTCAATGCACACC+AGG | 0.664229 | 7_3:+58422253 | None:intergenic |
| AAAACATTGTTCCTCTCACG+GGG | 0.665519 | 7_3:-58424083 | Msa1112440:CDS |
| TAAGGATAGCAACAGCTGTG+TGG | 0.667981 | 7_3:+58422135 | None:intergenic |
| CAGCTAAGGCAAAAGGCCAG+TGG | 0.668196 | 7_3:+58421350 | None:intergenic |
| TTATAGTTGAGAATCCGCTA+AGG | 0.669704 | 7_3:-58420866 | Msa1112440:three_prime_UTR |
| TTTCCTCCGGCTGCACCACG+AGG | 0.673924 | 7_3:+58424394 | None:intergenic |
| TACTCAAAAGCGTTTCAATG+GGG | 0.677049 | 7_3:+58424473 | None:intergenic |
| ATAGACATTGCAGAAAACCA+TGG | 0.683442 | 7_3:+58427785 | None:intergenic |
| ATTATTATGCTAACAAGACA+AGG | 0.683656 | 7_3:-58424282 | Msa1112440:CDS |
| TCACTGAAGGCATTGCACCA+TGG | 0.709451 | 7_3:+58424881 | None:intergenic |
| CTTTGGTGCCAATATAACCG+TGG | 0.709663 | 7_3:-58425214 | Msa1112440:CDS |
| AATGGTGAATGAATAACCAG+CGG | 0.723305 | 7_3:+58424823 | None:intergenic |
| GACATTGCAGAAAACCATGG+CGG | 0.743058 | 7_3:+58427788 | None:intergenic |
| TCTTGCGATCGAAACCATGG+AGG | 0.755198 | 7_3:-58423564 | Msa1112440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATATATATATATATA+CGG | + | chr7_3:58421072-58421091 | None:intergenic | 0.0% |
| !!! | ATATATATATTTTTTTTTTT+TGG | - | chr7_3:58421079-58421098 | Msa1112440:CDS | 0.0% |
| !!! | TAATAAGAATAGTATTATTT+TGG | + | chr7_3:58424058-58424077 | None:intergenic | 10.0% |
| !!! | TATATTTTTTACTACTAAAT+GGG | - | chr7_3:58425956-58425975 | Msa1112440:intron | 10.0% |
| !! | AAAAAAGTAAATTAAGATAA+AGG | + | chr7_3:58426421-58426440 | None:intergenic | 10.0% |
| !! | TAATAATTACAAAATTTCAT+TGG | + | chr7_3:58426569-58426588 | None:intergenic | 10.0% |
| !!! | ATGAAATTTTGTAATTATTA+AGG | - | chr7_3:58426569-58426588 | Msa1112440:intron | 10.0% |
| !!! | TGAAATTTTGTAATTATTAA+GGG | - | chr7_3:58426570-58426589 | Msa1112440:intron | 10.0% |
| !!! | TTTTGACTATTTATTATTTA+TGG | - | chr7_3:58426912-58426931 | Msa1112440:intron | 10.0% |
| !! | TTTGACTATTTATTATTTAT+GGG | - | chr7_3:58426913-58426932 | Msa1112440:intron | 10.0% |
| !!! | TAATTTTCTCAAATTATTAT+TGG | - | chr7_3:58428244-58428263 | Msa1112440:intron | 10.0% |
| !! | TAGATATAGAATAATATAAA+TGG | - | chr7_3:58428759-58428778 | Msa1112440:intron | 10.0% |
| !! | TAAATGAGTAAAAAACAAAA+GGG | + | chr7_3:58420746-58420765 | None:intergenic | 15.0% |
| !! | ATAAATGAGTAAAAAACAAA+AGG | + | chr7_3:58420747-58420766 | None:intergenic | 15.0% |
| !!! | AATGTTAATTATGCTTTTAA+AGG | - | chr7_3:58420971-58420990 | Msa1112440:three_prime_UTR | 15.0% |
| !!! | TCATTTTTTGATATTTTTTG+AGG | - | chr7_3:58421919-58421938 | Msa1112440:CDS | 15.0% |
| !! | TGATGAAATTCAATAAATAA+GGG | + | chr7_3:58423148-58423167 | None:intergenic | 15.0% |
| !! | TTGATGAAATTCAATAAATA+AGG | + | chr7_3:58423149-58423168 | None:intergenic | 15.0% |
| !! | TTAACTAACTACAATTAATA+AGG | - | chr7_3:58423179-58423198 | Msa1112440:intron | 15.0% |
| !! | TAACTAACTACAATTAATAA+GGG | - | chr7_3:58423180-58423199 | Msa1112440:intron | 15.0% |
| !!! | ATTGTTTTTATTTGTTGTAT+TGG | - | chr7_3:58423318-58423337 | Msa1112440:intron | 15.0% |
| !! | AGTTCAATTAAAAGTTTATT+AGG | - | chr7_3:58423428-58423447 | Msa1112440:intron | 15.0% |
| !!! | TTTGTTTTTAATTTCTTAGA+TGG | - | chr7_3:58423725-58423744 | Msa1112440:intron | 15.0% |
| !!! | GTTCAACATTTAATTTAATT+TGG | + | chr7_3:58424133-58424152 | None:intergenic | 15.0% |
| !!! | GTATATTTTTTACTACTAAA+TGG | - | chr7_3:58425955-58425974 | Msa1112440:intron | 15.0% |
| !!! | ATATTTTTTACTACTAAATG+GGG | - | chr7_3:58425957-58425976 | Msa1112440:intron | 15.0% |
| !!! | ATTAATTTTTTGTTGAGATT+AGG | - | chr7_3:58426121-58426140 | Msa1112440:intron | 15.0% |
| !!! | AAAAAGTTTTTTTAGAAGTA+AGG | + | chr7_3:58426516-58426535 | None:intergenic | 15.0% |
| !!! | GAAATTTTGTAATTATTAAG+GGG | - | chr7_3:58426571-58426590 | Msa1112440:intron | 15.0% |
| !!! | AAAAAGACAAACATTTTTTA+TGG | + | chr7_3:58427784-58427803 | None:intergenic | 15.0% |
| !! | TAGAATAATATAAATGGAAT+AGG | - | chr7_3:58428765-58428784 | Msa1112440:intron | 15.0% |
| !! | TACAGTACAATACTATTATT+TGG | - | chr7_3:58420913-58420932 | Msa1112440:three_prime_UTR | 20.0% |
| !!! | TTTTTTTTTTTGGTTCTTCT+TGG | - | chr7_3:58421089-58421108 | Msa1112440:CDS | 20.0% |
| !!! | CTTATTTTCTATCCATTATA+AGG | - | chr7_3:58421612-58421631 | Msa1112440:intron | 20.0% |
| !! | AATAGCATATTACCTTATAA+TGG | + | chr7_3:58421627-58421646 | None:intergenic | 20.0% |
| !!! | TTTTGATATTTTTTGAGGTT+TGG | - | chr7_3:58421924-58421943 | Msa1112440:CDS | 20.0% |
| !!! | AAAGTATCTCATATTACATA+AGG | - | chr7_3:58422094-58422113 | Msa1112440:intron | 20.0% |
| !!! | TGGAACATATTTTACATTAA+GGG | + | chr7_3:58422194-58422213 | None:intergenic | 20.0% |
| !!! | TTGGAACATATTTTACATTA+AGG | + | chr7_3:58422195-58422214 | None:intergenic | 20.0% |
| !! | TCTTTCAAAGTTATGTTTAA+GGG | + | chr7_3:58422391-58422410 | None:intergenic | 20.0% |
| !! | ATCTTTCAAAGTTATGTTTA+AGG | + | chr7_3:58422392-58422411 | None:intergenic | 20.0% |
| !! | TATTAAATTAAAAGAGTGAG+TGG | + | chr7_3:58422521-58422540 | None:intergenic | 20.0% |
| !! | AAAAACAATAAATGCTGTAT+TGG | + | chr7_3:58423109-58423128 | None:intergenic | 20.0% |
| !!! | AATAAATAAGGGTATAATAG+TGG | + | chr7_3:58423137-58423156 | None:intergenic | 20.0% |
| !! | TCAACTTTAGTTATAAAGAA+TGG | - | chr7_3:58423535-58423554 | Msa1112440:CDS | 20.0% |
| !! | CAACTTTAGTTATAAAGAAT+GGG | - | chr7_3:58423536-58423555 | Msa1112440:CDS | 20.0% |
| !! | AACTTTAGTTATAAAGAATG+GGG | - | chr7_3:58423537-58423556 | Msa1112440:CDS | 20.0% |
| !! | ATTAAATGTTGAACCATTAT+TGG | - | chr7_3:58424139-58424158 | Msa1112440:CDS | 20.0% |
| !! | TGTATTTACCTTCAATAATT+GGG | + | chr7_3:58425173-58425192 | None:intergenic | 20.0% |
| !! | GGTAAATAATATGATTCAAA+GGG | + | chr7_3:58425261-58425280 | None:intergenic | 20.0% |
| !! | CTTTGAATCATATTATTTAC+CGG | - | chr7_3:58425260-58425279 | Msa1112440:intron | 20.0% |
| !! | TTAATACATCAGGAAATAAA+TGG | + | chr7_3:58426160-58426179 | None:intergenic | 20.0% |
| !! | ATTTATTTCCTGATGTATTA+AGG | - | chr7_3:58426159-58426178 | Msa1112440:intron | 20.0% |
| !! | AGTAAATAAAAAACACTACT+AGG | + | chr7_3:58426331-58426350 | None:intergenic | 20.0% |
| !! | TGTTGTGTAACTTATTTATT+AGG | - | chr7_3:58426378-58426397 | Msa1112440:intron | 20.0% |
| !!! | TATTAGGAAAAATTGTCTTT+TGG | - | chr7_3:58426394-58426413 | Msa1112440:intron | 20.0% |
| !! | AACGTTTAAAAGTAGTATAA+AGG | + | chr7_3:58426476-58426495 | None:intergenic | 20.0% |
| !!! | AAAAGATAATATTGATAGTG+CGG | - | chr7_3:58426793-58426812 | Msa1112440:intron | 20.0% |
| !! | TGATCTTAATTTAACACTTT+AGG | + | chr7_3:58426876-58426895 | None:intergenic | 20.0% |
| !!! | AAAGTGTTAAATTAAGATCA+AGG | - | chr7_3:58426876-58426895 | Msa1112440:intron | 20.0% |
| !! | TTGAATATGTATTCACAATA+TGG | - | chr7_3:58427176-58427195 | Msa1112440:intron | 20.0% |
| !! | CAAATCTAGTTATTGAAAAT+TGG | - | chr7_3:58427231-58427250 | Msa1112440:intron | 20.0% |
| !! | CTGCATAATAAAAGATATTA+CGG | + | chr7_3:58427444-58427463 | None:intergenic | 20.0% |
| !!! | GTCTTTTTCATATTTATTGA+TGG | - | chr7_3:58427796-58427815 | Msa1112440:CDS | 20.0% |
| !! | ATAATATAAATGGAATAGGT+TGG | - | chr7_3:58428769-58428788 | Msa1112440:intron | 20.0% |
| !!! | TTTCTCTATTTTTGTGTTTA+AGG | - | chr7_3:58428826-58428845 | Msa1112440:intron | 20.0% |
| !! | GTAAATTATCCTATAAAGAA+TGG | + | chr7_3:58429140-58429159 | None:intergenic | 20.0% |
| !! | TTCTTTATAACTTACTTAGA+TGG | - | chr7_3:58429331-58429350 | Msa1112440:five_prime_UTR | 20.0% |
| !! | TAGTGTGAATTTTATTGAGT+TGG | - | chr7_3:58420805-58420824 | Msa1112440:three_prime_UTR | 25.0% |
| !!! | GAATTTTATTGAGTTGGAAT+TGG | - | chr7_3:58420811-58420830 | Msa1112440:three_prime_UTR | 25.0% |
| !!! | ATTGGTCTGTTTTTATGTTT+AGG | - | chr7_3:58420880-58420899 | Msa1112440:three_prime_UTR | 25.0% |
| ! | ATACTATTATTTGGCTATGA+TGG | - | chr7_3:58420922-58420941 | Msa1112440:three_prime_UTR | 25.0% |
| !! | AGTTTTGCTCTAATTTCAAT+GGG | + | chr7_3:58421183-58421202 | None:intergenic | 25.0% |
| ! | TACTTCAACTAAGATAACAA+TGG | + | chr7_3:58421493-58421512 | None:intergenic | 25.0% |
| ! | CAAATTGAGTTTATAGTCTT+TGG | + | chr7_3:58421588-58421607 | None:intergenic | 25.0% |
| ! | AATCCTTATATAAGCAAGAA+AGG | - | chr7_3:58421743-58421762 | Msa1112440:intron | 25.0% |
| ! | ATTCCTTTCTTGCTTATATA+AGG | + | chr7_3:58421749-58421768 | None:intergenic | 25.0% |
| !! | TTTTATATTTCCTTCTGCTT+TGG | - | chr7_3:58421835-58421854 | Msa1112440:intron | 25.0% |
| ! | AGATATCAAAGTAGAAGAAT+CGG | + | chr7_3:58422066-58422085 | None:intergenic | 25.0% |
| !!! | TTAAGGGAGAATATTTTAGA+AGG | + | chr7_3:58422178-58422197 | None:intergenic | 25.0% |
| ! | CTGAAAATAAACAGTCAAAA+AGG | + | chr7_3:58422672-58422691 | None:intergenic | 25.0% |
| !!! | AAACAATCAGGTATTGTTTT+AGG | - | chr7_3:58422796-58422815 | Msa1112440:intron | 25.0% |
| ! | GCATAAAACATGGAATAATT+TGG | - | chr7_3:58422886-58422905 | Msa1112440:intron | 25.0% |
| !!! | AAGAGACAATTATTTTGAGA+CGG | + | chr7_3:58423042-58423061 | None:intergenic | 25.0% |
| !!! | TAAACGACTATTATTTTGAG+AGG | - | chr7_3:58423280-58423299 | Msa1112440:intron | 25.0% |
| !! | TAACAGCTTATGCTTTTAAA+AGG | + | chr7_3:58423629-58423648 | None:intergenic | 25.0% |
| !!! | TTTTAAAAGCATAAGCTGTT+AGG | - | chr7_3:58423628-58423647 | Msa1112440:intron | 25.0% |
| ! | AAAATTGTTCCAATAAGTGA+TGG | + | chr7_3:58423901-58423920 | None:intergenic | 25.0% |
| ! | TAAAATCTACCAACAAAATC+CGG | + | chr7_3:58424003-58424022 | None:intergenic | 25.0% |
| ! | TGGAAAACTTCTTGAATAAT+GGG | + | chr7_3:58424038-58424057 | None:intergenic | 25.0% |
| ! | TTGGAAAACTTCTTGAATAA+TGG | + | chr7_3:58424039-58424058 | None:intergenic | 25.0% |
| ! | ACTTGTAGATTAGAAATCAT+TGG | + | chr7_3:58424220-58424239 | None:intergenic | 25.0% |
| !! | TACTTGCATTTTTATTCGTA+AGG | - | chr7_3:58424287-58424306 | Msa1112440:CDS | 25.0% |
| ! | ACTCGCTTTATATGAAATTT+GGG | + | chr7_3:58424425-58424444 | None:intergenic | 25.0% |
| ! | TACTCGCTTTATATGAAATT+TGG | + | chr7_3:58424426-58424445 | None:intergenic | 25.0% |
| !!! | AGTTTTCAAATTACTTTTGC+AGG | + | chr7_3:58424734-58424753 | None:intergenic | 25.0% |
| ! | GTTATTCATTCACCATTAAT+TGG | - | chr7_3:58424973-58424992 | Msa1112440:CDS | 25.0% |
| ! | TAGATATCCATTGTACAATT+TGG | + | chr7_3:58425114-58425133 | None:intergenic | 25.0% |
| ! | TTTATTCTCCCAATTATTGA+AGG | - | chr7_3:58425162-58425181 | Msa1112440:CDS | 25.0% |
| ! | GTGTATTTACCTTCAATAAT+TGG | + | chr7_3:58425174-58425193 | None:intergenic | 25.0% |
| ! | AATTATTAACAAGACGAGAA+TGG | - | chr7_3:58425201-58425220 | Msa1112440:CDS | 25.0% |
| ! | CGGTAAATAATATGATTCAA+AGG | + | chr7_3:58425262-58425281 | None:intergenic | 25.0% |
| ! | TATGAAGTTTATGCTAGATT+TGG | - | chr7_3:58425456-58425475 | Msa1112440:intron | 25.0% |
| ! | ATTATTATGCTAACAAGACA+AGG | - | chr7_3:58425508-58425527 | Msa1112440:intron | 25.0% |
| ! | TATATTATGTATGCTAGAGA+AGG | - | chr7_3:58425591-58425610 | Msa1112440:intron | 25.0% |
| !! | AAATTTTCTTTTGATGCAAG+TGG | - | chr7_3:58425735-58425754 | Msa1112440:intron | 25.0% |
| ! | GTCTATCAAATGTTACATTA+TGG | + | chr7_3:58425849-58425868 | None:intergenic | 25.0% |
| ! | TAATGTAACATTTGATAGAC+AGG | - | chr7_3:58425849-58425868 | Msa1112440:intron | 25.0% |
| ! | ATTAAAAGTAAAGCAGAACA+CGG | - | chr7_3:58425912-58425931 | Msa1112440:intron | 25.0% |
| ! | CTGTTCTGTTATATTCTAAA+TGG | + | chr7_3:58425988-58426007 | None:intergenic | 25.0% |
| !! | CATTTAGAATATAACAGAAC+AGG | - | chr7_3:58425986-58426005 | Msa1112440:CDS | 25.0% |
| ! | AAAATTTCATTGGAGAAACT+TGG | + | chr7_3:58426559-58426578 | None:intergenic | 25.0% |
| !!! | TCAATAATTTTTCGAACTCA+TGG | + | chr7_3:58426773-58426792 | None:intergenic | 25.0% |
| ! | TATTTATTATTTATGGGCGT+GGG | - | chr7_3:58426919-58426938 | Msa1112440:intron | 25.0% |
| ! | TGACAAATGAATAGAAAAAG+AGG | + | chr7_3:58427139-58427158 | None:intergenic | 25.0% |
| ! | AACCAAAAAAGGTAAACTAT+GGG | + | chr7_3:58427413-58427432 | None:intergenic | 25.0% |
| ! | AAACCAAAAAAGGTAAACTA+TGG | + | chr7_3:58427414-58427433 | None:intergenic | 25.0% |
| !! | CGTAATATCTTTTATTATGC+AGG | - | chr7_3:58427442-58427461 | Msa1112440:CDS | 25.0% |
| !!! | TATTGATGAAGTATTGAAGA+GGG | - | chr7_3:58427628-58427647 | Msa1112440:intron | 25.0% |
| ! | ATCACTGATAAGTTATATTG+AGG | + | chr7_3:58428348-58428367 | None:intergenic | 25.0% |
| !!! | TGAAATGTTTTTACAGCTTT+TGG | - | chr7_3:58428607-58428626 | Msa1112440:intron | 25.0% |
| ! | CAATATTTACTTTCGAACAA+AGG | + | chr7_3:58428665-58428684 | None:intergenic | 25.0% |
| ! | TTGTTCGAAAGTAAATATTG+TGG | - | chr7_3:58428665-58428684 | Msa1112440:intron | 25.0% |
| !! | ATTTAATCTCAAAGCATCTA+TGG | - | chr7_3:58428950-58428969 | Msa1112440:intron | 25.0% |
| !! | TGTAAATTATTTTCAGCACA+AGG | - | chr7_3:58429104-58429123 | Msa1112440:CDS | 25.0% |
| ! | TTGTTTATGCCATTCTTTAT+AGG | - | chr7_3:58429128-58429147 | Msa1112440:CDS | 25.0% |
| !! | ATCAAACTAGGGATAATTTT+TGG | - | chr7_3:58429170-58429189 | Msa1112440:CDS | 25.0% |
| ! | CTAAATATGATACAGTTCAA+AGG | + | chr7_3:58429251-58429270 | None:intergenic | 25.0% |
| CTTATATAGCGCAAATCAAA+GGG | + | chr7_3:58420698-58420717 | None:intergenic | 30.0% | |
| TCTTATATAGCGCAAATCAA+AGG | + | chr7_3:58420699-58420718 | None:intergenic | 30.0% | |
| !! | TTTGATTTGCGCTATATAAG+AGG | - | chr7_3:58420698-58420717 | Msa1112440:three_prime_UTR | 30.0% |
| ! | GTCTATGTGGATTACATAAT+TGG | - | chr7_3:58420862-58420881 | Msa1112440:three_prime_UTR | 30.0% |
| ! | GTTTTTATGTTTAGGCTATG+TGG | - | chr7_3:58420888-58420907 | Msa1112440:three_prime_UTR | 30.0% |
| ATAACCTACTTATCAATCTC+AGG | + | chr7_3:58421001-58421020 | None:intergenic | 30.0% | |
| !! | TCTCTCTAGTCTTTTAAGAA+TGG | - | chr7_3:58421035-58421054 | Msa1112440:exon | 30.0% |
| ! | GTTTTGCTCTAATTTCAATG+GGG | + | chr7_3:58421182-58421201 | None:intergenic | 30.0% |
| ! | GAGTTTTGCTCTAATTTCAA+TGG | + | chr7_3:58421184-58421203 | None:intergenic | 30.0% |
| AATTAGAGCAAAACTCTGTA+CGG | - | chr7_3:58421188-58421207 | Msa1112440:intron | 30.0% | |
| ! | CTGTGTTTCAAGTCAATATA+TGG | + | chr7_3:58421326-58421345 | None:intergenic | 30.0% |
| ! | AGTATGCAATGTTATTTGAG+TGG | - | chr7_3:58421344-58421363 | Msa1112440:CDS | 30.0% |
| ACATCACAGATTAGAGAATA+AGG | + | chr7_3:58421691-58421710 | None:intergenic | 30.0% | |
| GCAAGAAAGGAATAATAATC+AGG | - | chr7_3:58421756-58421775 | Msa1112440:intron | 30.0% | |
| TATACTTACAAGGTCTACAT+CGG | + | chr7_3:58422042-58422061 | None:intergenic | 30.0% | |
| AAGAATCGGATATACTTACA+AGG | + | chr7_3:58422052-58422071 | None:intergenic | 30.0% | |
| ! | TCGGTAAAGACAATTTTCAT+TGG | + | chr7_3:58422214-58422233 | None:intergenic | 30.0% |
| ! | GAACTTTTATGCAGCATAAT+CGG | + | chr7_3:58422233-58422252 | None:intergenic | 30.0% |
| CAGAAAGATAAGATTCTGAT+TGG | + | chr7_3:58422265-58422284 | None:intergenic | 30.0% | |
| TTATTTGTTTGCCTTCTTTC+AGG | - | chr7_3:58422285-58422304 | Msa1112440:CDS | 30.0% | |
| ! | GGATGTGTCTAAAATTGAAA+AGG | - | chr7_3:58422306-58422325 | Msa1112440:CDS | 30.0% |
| !! | CCATCTCTAAAGCATATTAT+TGG | + | chr7_3:58422349-58422368 | None:intergenic | 30.0% |
| !! | CCAATAATATGCTTTAGAGA+TGG | - | chr7_3:58422346-58422365 | Msa1112440:intron | 30.0% |
| !! | ATAATATGCTTTAGAGATGG+AGG | - | chr7_3:58422349-58422368 | Msa1112440:intron | 30.0% |
| AAAGTTATGTTTAAGGGATC+TGG | + | chr7_3:58422385-58422404 | None:intergenic | 30.0% | |
| AAATAAACAACATGCTTCCT+TGG | + | chr7_3:58422436-58422455 | None:intergenic | 30.0% | |
| !! | CATGTTGTTTATTTCTGTGT+TGG | - | chr7_3:58422442-58422461 | Msa1112440:intron | 30.0% |
| GTGTTGGACATTATTTATGT+TGG | - | chr7_3:58422458-58422477 | Msa1112440:intron | 30.0% | |
| ATTTATCCCTGAAGAAAATG+GGG | + | chr7_3:58422720-58422739 | None:intergenic | 30.0% | |
| CATTTATCCCTGAAGAAAAT+GGG | + | chr7_3:58422721-58422740 | None:intergenic | 30.0% | |
| ACCTCTATAAGCATAAAACA+TGG | - | chr7_3:58422876-58422895 | Msa1112440:intron | 30.0% | |
| ! | TCCATGTTTTATGCTTATAG+AGG | + | chr7_3:58422880-58422899 | None:intergenic | 30.0% |
| TATCATGTGTTGTCAAATAG+TGG | - | chr7_3:58422940-58422959 | Msa1112440:intron | 30.0% | |
| !!! | GACTATTATTTTGAGAGGAA+GGG | - | chr7_3:58423285-58423304 | Msa1112440:intron | 30.0% |
| TCTATGTCATTATAACCATC+AGG | + | chr7_3:58423369-58423388 | None:intergenic | 30.0% | |
| !! | GCTTATGCTTTTAAAAGGAT+TGG | + | chr7_3:58423624-58423643 | None:intergenic | 30.0% |
| TATCTAACATCTATGTTGCT+TGG | - | chr7_3:58423670-58423689 | Msa1112440:intron | 30.0% | |
| ! | ATCTAACATCTATGTTGCTT+GGG | - | chr7_3:58423671-58423690 | Msa1112440:intron | 30.0% |
| ATTATTGTTCAGATATCTCC+AGG | - | chr7_3:58423760-58423779 | Msa1112440:intron | 30.0% | |
| !! | GTTGTTGTTTCTTTAGAATC+CGG | - | chr7_3:58423981-58424000 | Msa1112440:intron | 30.0% |
| GGAAAACTTCTTGAATAATG+GGG | + | chr7_3:58424037-58424056 | None:intergenic | 30.0% | |
| GGTGTATTGTCGTTATTATT+TGG | - | chr7_3:58424164-58424183 | Msa1112440:CDS | 30.0% | |
| TATAAGCTCACATTGAAGTA+TGG | + | chr7_3:58424269-58424288 | None:intergenic | 30.0% | |
| ! | AGCTTTGTAAACTTAGAAAG+TGG | - | chr7_3:58424456-58424475 | Msa1112440:CDS | 30.0% |
| TGATGTCAATAATGCTTTGA+AGG | - | chr7_3:58424672-58424691 | Msa1112440:CDS | 30.0% | |
| TACAGAAAACAACACAATGT+TGG | - | chr7_3:58424696-58424715 | Msa1112440:CDS | 30.0% | |
| CTCCTTGGATATAATAAATG+TGG | - | chr7_3:58424786-58424805 | Msa1112440:CDS | 30.0% | |
| TGCCACATTTATTATATCCA+AGG | + | chr7_3:58424791-58424810 | None:intergenic | 30.0% | |
| ACAACTTCAAACAAAACAAC+TGG | - | chr7_3:58424853-58424872 | Msa1112440:CDS | 30.0% | |
| TGAGTGTTTACAAGATTGAT+CGG | + | chr7_3:58425021-58425040 | None:intergenic | 30.0% | |
| ! | GTTTTGTGTAGACATTTGTA+CGG | - | chr7_3:58425223-58425242 | Msa1112440:CDS | 30.0% |
| TAATATGATTCAAAGGGAGT+TGG | + | chr7_3:58425255-58425274 | None:intergenic | 30.0% | |
| GAATCATATTATTTACCGGT+TGG | - | chr7_3:58425264-58425283 | Msa1112440:intron | 30.0% | |
| !! | TTACTCAAAAGCGTTTCAAT+GGG | + | chr7_3:58425321-58425340 | None:intergenic | 30.0% |
| TTGAGTAACTCATCATACAA+TGG | - | chr7_3:58425333-58425352 | Msa1112440:intron | 30.0% | |
| ! | CATTTGGACTTACTTACTTT+TGG | - | chr7_3:58425368-58425387 | Msa1112440:intron | 30.0% |
| ATAATTGATCTTCACATCTG+AGG | + | chr7_3:58425439-58425458 | None:intergenic | 30.0% | |
| ATGCTATATGATTCAAGTGA+TGG | - | chr7_3:58425555-58425574 | Msa1112440:intron | 30.0% | |
| !!! | TTTTTTACTACTAAATGGGG+TGG | - | chr7_3:58425960-58425979 | Msa1112440:intron | 30.0% |
| GATGAATTCCTTAATACATC+AGG | + | chr7_3:58426170-58426189 | None:intergenic | 30.0% | |
| GTTGAAATTGTAACACATCA+AGG | - | chr7_3:58426262-58426281 | Msa1112440:intron | 30.0% | |
| ! | AAACTTGGAGAATTTTGTGT+TGG | + | chr7_3:58426544-58426563 | None:intergenic | 30.0% |
| CTCATTCAGTTTATAGAAGA+TGG | - | chr7_3:58426626-58426645 | Msa1112440:intron | 30.0% | |
| CTATTTATTATTTATGGGCG+TGG | - | chr7_3:58426918-58426937 | Msa1112440:intron | 30.0% | |
| TAGTTATTGAAAATTGGTGC+AGG | - | chr7_3:58427237-58427256 | Msa1112440:intron | 30.0% | |
| AGTTATTGAAAATTGGTGCA+GGG | - | chr7_3:58427238-58427257 | Msa1112440:intron | 30.0% | |
| !!! | AACCCATAGTTTACCTTTTT+TGG | - | chr7_3:58427408-58427427 | Msa1112440:CDS | 30.0% |
| CTATAATGTCTTACAGTTCA+TGG | - | chr7_3:58427553-58427572 | Msa1112440:intron | 30.0% | |
| !! | CTATTGATGAAGTATTGAAG+AGG | - | chr7_3:58427627-58427646 | Msa1112440:intron | 30.0% |
| TAGAGTTGTCAACAAAGTAT+AGG | - | chr7_3:58427893-58427912 | Msa1112440:intron | 30.0% | |
| GAATCTAACTGAAAAGGAAA+GGG | + | chr7_3:58427920-58427939 | None:intergenic | 30.0% | |
| AGAATCTAACTGAAAAGGAA+AGG | + | chr7_3:58427921-58427940 | None:intergenic | 30.0% | |
| AAGTGAGAATCTAACTGAAA+AGG | + | chr7_3:58427926-58427945 | None:intergenic | 30.0% | |
| AACAACGGATAAACATGAAT+AGG | + | chr7_3:58428086-58428105 | None:intergenic | 30.0% | |
| GATAAGGTAAAAATTGAGGA+GGG | + | chr7_3:58428564-58428583 | None:intergenic | 30.0% | |
| AGATAAGGTAAAAATTGAGG+AGG | + | chr7_3:58428565-58428584 | None:intergenic | 30.0% | |
| GGTAGATAAGGTAAAAATTG+AGG | + | chr7_3:58428568-58428587 | None:intergenic | 30.0% | |
| CAAAAGAAATCAAACATGAG+AGG | + | chr7_3:58428589-58428608 | None:intergenic | 30.0% | |
| TTCTATATCTAACCACTTCT+TGG | + | chr7_3:58428750-58428769 | None:intergenic | 30.0% | |
| TGAGATTAAATGTACCTTAG+CGG | + | chr7_3:58428941-58428960 | None:intergenic | 30.0% | |
| CAAAAGGGTCACTGTAAATT+AGG | + | chr7_3:58420731-58420750 | None:intergenic | 35.0% | |
| AGTTCCTGAGATTGATAAGT+AGG | - | chr7_3:58420994-58421013 | Msa1112440:three_prime_UTR | 35.0% | |
| !! | TTTGGTTCTTCTTGGAAACT+TGG | - | chr7_3:58421097-58421116 | Msa1112440:CDS | 35.0% |
| !! | TTGAGTGGTGTTTGTTGTTT+AGG | - | chr7_3:58421359-58421378 | Msa1112440:CDS | 35.0% |
| CTATACGCTATGAGCTTATA+AGG | + | chr7_3:58421445-58421464 | None:intergenic | 35.0% | |
| GGTGTGTAAAAAAGTTCAGA+TGG | - | chr7_3:58421777-58421796 | Msa1112440:intron | 35.0% | |
| AATTGAATCACCAAAGCAGA+AGG | + | chr7_3:58421848-58421867 | None:intergenic | 35.0% | |
| !!! | TTTTTTGAGGTTTGGAGTTG+TGG | - | chr7_3:58421932-58421951 | Msa1112440:CDS | 35.0% |
| ATAGACATTGCAGAAAACCA+TGG | + | chr7_3:58422008-58422027 | None:intergenic | 35.0% | |
| TATGCTGCATAAAAGTTCCA+TGG | - | chr7_3:58422235-58422254 | Msa1112440:CDS | 35.0% | |
| TTTAGACACATCCTGAAAGA+AGG | + | chr7_3:58422299-58422318 | None:intergenic | 35.0% | |
| GAAGGAGAATAAACGAATGA+GGG | + | chr7_3:58422604-58422623 | None:intergenic | 35.0% | |
| AGAAGGAGAATAAACGAATG+AGG | + | chr7_3:58422605-58422624 | None:intergenic | 35.0% | |
| AAGGGAGATAGATAATGAGA+AGG | + | chr7_3:58422622-58422641 | None:intergenic | 35.0% | |
| CTCTTCATTGTTGTCAAGAA+GGG | + | chr7_3:58422640-58422659 | None:intergenic | 35.0% | |
| TCTCTTCATTGTTGTCAAGA+AGG | + | chr7_3:58422641-58422660 | None:intergenic | 35.0% | |
| GAACAGAGAGTAATCATAAC+AGG | + | chr7_3:58422698-58422717 | None:intergenic | 35.0% | |
| CCATTTATCCCTGAAGAAAA+TGG | + | chr7_3:58422722-58422741 | None:intergenic | 35.0% | |
| ! | CCATTTTCTTCAGGGATAAA+TGG | - | chr7_3:58422719-58422738 | Msa1112440:intron | 35.0% |
| AGGGATAAATGGTTTAGATG+TGG | - | chr7_3:58422730-58422749 | Msa1112440:intron | 35.0% | |
| ! | ACAGTGATGTTTTTCTGCAT+AGG | + | chr7_3:58422767-58422786 | None:intergenic | 35.0% |
| TGTGAAACTGACAAACAATC+AGG | - | chr7_3:58422784-58422803 | Msa1112440:intron | 35.0% | |
| TACTCAGTGTTGTCAAATAG+CGG | - | chr7_3:58422846-58422865 | Msa1112440:intron | 35.0% | |
| !!! | GACAATTATTTTGAGACGGA+GGG | + | chr7_3:58423038-58423057 | None:intergenic | 35.0% |
| !!! | AGACAATTATTTTGAGACGG+AGG | + | chr7_3:58423039-58423058 | None:intergenic | 35.0% |
| ! | CAGTTTGTGCACGATTTTTA+AGG | + | chr7_3:58423260-58423279 | None:intergenic | 35.0% |
| !!! | CGACTATTATTTTGAGAGGA+AGG | - | chr7_3:58423284-58423303 | Msa1112440:intron | 35.0% |
| ! | TTGAACTGACTCATGACTAT+AGG | + | chr7_3:58423415-58423434 | None:intergenic | 35.0% |
| TAAAGTTGAACTTCAGCACA+AGG | + | chr7_3:58423524-58423543 | None:intergenic | 35.0% | |
| ! | TCTAACATCTATGTTGCTTG+GGG | - | chr7_3:58423672-58423691 | Msa1112440:intron | 35.0% |
| !!! | CTTTAGAATCCGGATTTTGT+TGG | - | chr7_3:58423991-58424010 | Msa1112440:intron | 35.0% |
| ! | ACTTCTTGAATAATGGGGAA+AGG | + | chr7_3:58424032-58424051 | None:intergenic | 35.0% |
| AATGTTGAACCATTATTGGC+AGG | - | chr7_3:58424143-58424162 | Msa1112440:CDS | 35.0% | |
| ! | GAAATAGCAGTGTACTCTTT+TGG | + | chr7_3:58424490-58424509 | None:intergenic | 35.0% |
| TGCACAAATTCAATGATGAC+AGG | - | chr7_3:58424604-58424623 | Msa1112440:intron | 35.0% | |
| ATATCCAAGGAGAAGATGTT+TGG | + | chr7_3:58424778-58424797 | None:intergenic | 35.0% | |
| GGCAGAAGAATTTACAGTTA+TGG | - | chr7_3:58424807-58424826 | Msa1112440:CDS | 35.0% | |
| !! | TTAATGTGTTTTGTTCGCCA+TGG | - | chr7_3:58424892-58424911 | Msa1112440:CDS | 35.0% |
| TAATCATACACAGTCACTGA+AGG | + | chr7_3:58424925-58424944 | None:intergenic | 35.0% | |
| !! | CGGTGCTTTATTTAAATCAC+TGG | + | chr7_3:58424950-58424969 | None:intergenic | 35.0% |
| !! | TGATTTAAATAAAGCACCGC+TGG | - | chr7_3:58424951-58424970 | Msa1112440:CDS | 35.0% |
| AATGGTGAATGAATAACCAG+CGG | + | chr7_3:58424970-58424989 | None:intergenic | 35.0% | |
| ATTCACCATTAATTGGTCGT+TGG | - | chr7_3:58424980-58424999 | Msa1112440:CDS | 35.0% | |
| ATGTACCAACGACCAATTAA+TGG | + | chr7_3:58424988-58425007 | None:intergenic | 35.0% | |
| GATCAATCTTGTAAACACTC+AGG | - | chr7_3:58425020-58425039 | Msa1112440:CDS | 35.0% | |
| AATGGATATCTACATGCTTC+AGG | - | chr7_3:58425122-58425141 | Msa1112440:CDS | 35.0% | |
| ! | TATTATTTACCGGTTGGTTC+TGG | - | chr7_3:58425270-58425289 | Msa1112440:intron | 35.0% |
| !! | TACTCAAAAGCGTTTCAATG+GGG | + | chr7_3:58425320-58425339 | None:intergenic | 35.0% |
| !! | GTTACTCAAAAGCGTTTCAA+TGG | + | chr7_3:58425322-58425341 | None:intergenic | 35.0% |
| AAGTAAGTCCAAATGTTACC+AGG | + | chr7_3:58425363-58425382 | None:intergenic | 35.0% | |
| TTGCACATGAATATTTCCTC+CGG | + | chr7_3:58425412-58425431 | None:intergenic | 35.0% | |
| GAAGTTTATGCTAGATTTGG+TGG | - | chr7_3:58425459-58425478 | Msa1112440:intron | 35.0% | |
| ATGTAAACGGAACAAGCAAA+GGG | + | chr7_3:58425788-58425807 | None:intergenic | 35.0% | |
| AATGTAAACGGAACAAGCAA+AGG | + | chr7_3:58425789-58425808 | None:intergenic | 35.0% | |
| GGAAACAGATGGAATGTAAA+CGG | + | chr7_3:58425801-58425820 | None:intergenic | 35.0% | |
| TTTAAAGGCAAGGAAACAGA+TGG | + | chr7_3:58425812-58425831 | None:intergenic | 35.0% | |
| TGTCTAGCAATTTAAAGGCA+AGG | + | chr7_3:58425822-58425841 | None:intergenic | 35.0% | |
| GCTCTTGTCTAGCAATTTAA+AGG | + | chr7_3:58425827-58425846 | None:intergenic | 35.0% | |
| !! | CATGAGCTTTGTTCTATACT+TGG | - | chr7_3:58425884-58425903 | Msa1112440:intron | 35.0% |
| AATCACTACAAAGGACTTCT+AGG | + | chr7_3:58426048-58426067 | None:intergenic | 35.0% | |
| CAAAACCTCAATCACTACAA+AGG | + | chr7_3:58426057-58426076 | None:intergenic | 35.0% | |
| ! | TTGTAGTGATTGAGGTTTTG+TGG | - | chr7_3:58426057-58426076 | Msa1112440:intron | 35.0% |
| !! | TGTAGTGATTGAGGTTTTGT+GGG | - | chr7_3:58426058-58426077 | Msa1112440:intron | 35.0% |
| TGATTTGAGTGAGACATTTC+AGG | - | chr7_3:58426661-58426680 | Msa1112440:intron | 35.0% | |
| GATTTGAGTGAGACATTTCA+GGG | - | chr7_3:58426662-58426681 | Msa1112440:intron | 35.0% | |
| CATTTATGTGTTTACACCGT+TGG | + | chr7_3:58426825-58426844 | None:intergenic | 35.0% | |
| AATTGTCGAACACTCTTGAA+GGG | + | chr7_3:58427074-58427093 | None:intergenic | 35.0% | |
| AAATTGTCGAACACTCTTGA+AGG | + | chr7_3:58427075-58427094 | None:intergenic | 35.0% | |
| ! | AAAGAGGAGTACATGATCTT+TGG | + | chr7_3:58427123-58427142 | None:intergenic | 35.0% |
| TCTCATTGTATCCAATGTTG+CGG | - | chr7_3:58427281-58427300 | Msa1112440:intron | 35.0% | |
| CGGAGTTTCTAAACCAAAAA+AGG | + | chr7_3:58427424-58427443 | None:intergenic | 35.0% | |
| ATTATAGTTCAATGCACACC+AGG | + | chr7_3:58427540-58427559 | None:intergenic | 35.0% | |
| ! | TGCATTTGTTACAGCCATTA+GGG | + | chr7_3:58427684-58427703 | None:intergenic | 35.0% |
| ! | TTGCATTTGTTACAGCCATT+AGG | + | chr7_3:58427685-58427704 | None:intergenic | 35.0% |
| !! | TTATTGATGGTGAATCATGC+AGG | - | chr7_3:58427809-58427828 | Msa1112440:intron | 35.0% |
| CACTATCACAAGAACAACAT+TGG | + | chr7_3:58427839-58427858 | None:intergenic | 35.0% | |
| ! | GTTGTTCTTGTGATAGTGAT+TGG | - | chr7_3:58427841-58427860 | Msa1112440:intron | 35.0% |
| ACTCTATAACCCATCCAATT+AGG | + | chr7_3:58427879-58427898 | None:intergenic | 35.0% | |
| TTCATAGGTAACCACTAACA+AGG | - | chr7_3:58428317-58428336 | Msa1112440:intron | 35.0% | |
| CTTTATCACTTGTAAACTGC+AGG | + | chr7_3:58428379-58428398 | None:intergenic | 35.0% | |
| GTTTACAAGTGATAAAGCGA+TGG | - | chr7_3:58428382-58428401 | Msa1112440:intron | 35.0% | |
| GATGGCTATGTAATCTTGTT+GGG | - | chr7_3:58428400-58428419 | Msa1112440:intron | 35.0% | |
| TTGAAACCAGTGAAACTTAC+TGG | - | chr7_3:58428502-58428521 | Msa1112440:intron | 35.0% | |
| !!! | AAACTTACTGGTTTTGGCAT+AGG | - | chr7_3:58428514-58428533 | Msa1112440:intron | 35.0% |
| TCAAACATGAGAGGTAGATA+AGG | + | chr7_3:58428580-58428599 | None:intergenic | 35.0% | |
| ! | AGTTCATAGTTTGCATTTGC+AGG | + | chr7_3:58428708-58428727 | None:intergenic | 35.0% |
| !! | TGGAATAGGTTGGTGTAAAA+AGG | - | chr7_3:58428779-58428798 | Msa1112440:intron | 35.0% |
| !! | GGAATAGGTTGGTGTAAAAA+GGG | - | chr7_3:58428780-58428799 | Msa1112440:intron | 35.0% |
| ! | TAACGGTATTGGATGTGAAT+CGG | - | chr7_3:58428889-58428908 | Msa1112440:intron | 35.0% |
| TTATAGTTGAGAATCCGCTA+AGG | - | chr7_3:58428924-58428943 | Msa1112440:intron | 35.0% | |
| ! | GAATGTACATTTTGTCTCAG+AGG | + | chr7_3:58428980-58428999 | None:intergenic | 35.0% |
| GACAAAATGTACATTCGCAA+TGG | - | chr7_3:58428984-58429003 | Msa1112440:intron | 35.0% | |
| ! | ATTGGATTAGAAGTCATCCT+AGG | - | chr7_3:58429031-58429050 | Msa1112440:intron | 35.0% |
| ACCCTCAAAAGAATCAAACT+AGG | - | chr7_3:58429158-58429177 | Msa1112440:CDS | 35.0% | |
| ! | CCCTAGTTTGATTCTTTTGA+GGG | + | chr7_3:58429162-58429181 | None:intergenic | 35.0% |
| CCCTCAAAAGAATCAAACTA+GGG | - | chr7_3:58429159-58429178 | Msa1112440:CDS | 35.0% | |
| ! | TCCCTAGTTTGATTCTTTTG+AGG | + | chr7_3:58429163-58429182 | None:intergenic | 35.0% |
| !!! | ACTAGGGATAATTTTTGGTG+AGG | - | chr7_3:58429175-58429194 | Msa1112440:CDS | 35.0% |
| !!! | CTAGGGATAATTTTTGGTGA+GGG | - | chr7_3:58429176-58429195 | Msa1112440:CDS | 35.0% |
| !!! | TAGGGATAATTTTTGGTGAG+GGG | - | chr7_3:58429177-58429196 | Msa1112440:CDS | 35.0% |
| CTGCTCTTCAATCTTCATAA+TGG | - | chr7_3:58429288-58429307 | Msa1112440:five_prime_UTR | 35.0% | |
| TTCAAGAGATTGACGCAGAT+GGG | + | chr7_3:58420520-58420539 | None:intergenic | 40.0% | |
| TTTCAAGAGATTGACGCAGA+TGG | + | chr7_3:58420521-58420540 | None:intergenic | 40.0% | |
| AAAGGTTTCACCTTTACTGC+TGG | + | chr7_3:58420636-58420655 | None:intergenic | 40.0% | |
| GCTGAAGCTGGAAACAATAA+AGG | + | chr7_3:58420654-58420673 | None:intergenic | 40.0% | |
| ! | CTAAAAGTATGCTCCTCTCT+AGG | + | chr7_3:58421263-58421282 | None:intergenic | 40.0% |
| !! | CTAGAGAGGAGCATACTTTT+AGG | - | chr7_3:58421261-58421280 | Msa1112440:intron | 40.0% |
| TTAGAGAATAAGGCTCTGCT+TGG | + | chr7_3:58421681-58421700 | None:intergenic | 40.0% | |
| AGATTCTGATTGGAACTCCA+TGG | + | chr7_3:58422255-58422274 | None:intergenic | 40.0% | |
| ATTATTGGCAGTGTGCTCAT+TGG | + | chr7_3:58422334-58422353 | None:intergenic | 40.0% | |
| TTGAAAGATTCAGCTGTCTC+AGG | - | chr7_3:58422403-58422422 | Msa1112440:intron | 40.0% | |
| CTTGACAACAATGAAGAGAC+AGG | - | chr7_3:58422642-58422661 | Msa1112440:intron | 40.0% | |
| ! | TCTGTTCCCCATTTTCTTCA+GGG | - | chr7_3:58422711-58422730 | Msa1112440:intron | 40.0% |
| ACATGATAAACAGCGTATCG+CGG | + | chr7_3:58422928-58422947 | None:intergenic | 40.0% | |
| GCTGTAGTACTTTAGCATAG+TGG | - | chr7_3:58422973-58422992 | Msa1112440:intron | 40.0% | |
| GGAGACATTGAACTAGATCA+AGG | + | chr7_3:58423348-58423367 | None:intergenic | 40.0% | |
| ! | TCTAGTTCAATGTCTCCTGA+TGG | - | chr7_3:58423351-58423370 | Msa1112440:intron | 40.0% |
| GATTCAAACTGCTAACCACT+TGG | - | chr7_3:58423567-58423586 | Msa1112440:CDS | 40.0% | |
| AAGCTGTTAGGTCACGTAAT+TGG | - | chr7_3:58423640-58423659 | Msa1112440:intron | 40.0% | |
| TTCAGATATCTCCAGGTGTT+TGG | - | chr7_3:58423767-58423786 | Msa1112440:intron | 40.0% | |
| !!! | TGGTTCGTTGGTCTTTTCAA+TGG | - | chr7_3:58423787-58423806 | Msa1112440:intron | 40.0% |
| !!! | GTTGGTCTTTTCAATGGCAT+TGG | - | chr7_3:58423793-58423812 | Msa1112440:intron | 40.0% |
| ! | AATAAGTGATGGAGCGTACA+TGG | + | chr7_3:58423890-58423909 | None:intergenic | 40.0% |
| ATGTACGCTCCATCACTTAT+TGG | - | chr7_3:58423889-58423908 | Msa1112440:intron | 40.0% | |
| GACAATACACCTGCCAATAA+TGG | + | chr7_3:58424155-58424174 | None:intergenic | 40.0% | |
| TCTACAAGTCAACGCTCTTT+AGG | - | chr7_3:58424231-58424250 | Msa1112440:CDS | 40.0% | |
| !! | AAGTCAACGCTCTTTAGGAT+AGG | - | chr7_3:58424236-58424255 | Msa1112440:CDS | 40.0% |
| TTTCTCTGTCCTATATGCCA+AGG | - | chr7_3:58424313-58424332 | Msa1112440:CDS | 40.0% | |
| TTCTCTGTCCTATATGCCAA+GGG | - | chr7_3:58424314-58424333 | Msa1112440:CDS | 40.0% | |
| TAGTTCAAATGTCAAGCCCT+TGG | + | chr7_3:58424333-58424352 | None:intergenic | 40.0% | |
| TGAATTTGTGCATGCTTCCA+CGG | + | chr7_3:58424596-58424615 | None:intergenic | 40.0% | |
| TCAGATGTTGTGCATGAGAA+CGG | + | chr7_3:58424655-58424674 | None:intergenic | 40.0% | |
| AAAACTTTCTGTGCTCACGA+AGG | - | chr7_3:58424748-58424767 | Msa1112440:CDS | 40.0% | |
| TGTACCAAACATCTTCTCCT+TGG | - | chr7_3:58424771-58424790 | Msa1112440:CDS | 40.0% | |
| GCAAGTGATGTCAAATTCAG+TGG | - | chr7_3:58424829-58424848 | Msa1112440:CDS | 40.0% | |
| ACAACTGGTGCAAATGATGT+TGG | - | chr7_3:58424868-58424887 | Msa1112440:CDS | 40.0% | |
| CACTCAGGATAGTAATGTGA+CGG | - | chr7_3:58425035-58425054 | Msa1112440:CDS | 40.0% | |
| !! | TAATGTGACGGCTTGCTATT+CGG | - | chr7_3:58425047-58425066 | Msa1112440:CDS | 40.0% |
| AAGCGTTTCAATGGGGAAAT+TGG | + | chr7_3:58425313-58425332 | None:intergenic | 40.0% | |
| TCATCATACAATGGAGAACC+TGG | - | chr7_3:58425342-58425361 | Msa1112440:intron | 40.0% | |
| ATGGAGAACCTGGTAACATT+TGG | - | chr7_3:58425352-58425371 | Msa1112440:intron | 40.0% | |
| !! | TTACTTTTGGACATTCCTCG+TGG | - | chr7_3:58425381-58425400 | Msa1112440:intron | 40.0% |
| ATTGCCGTCTCTTATTAGCT+GGG | - | chr7_3:58425482-58425501 | Msa1112440:intron | 40.0% | |
| TAGTCCCAGCTAATAAGAGA+CGG | + | chr7_3:58425489-58425508 | None:intergenic | 40.0% | |
| TTTAGAAGGATCACTTCTGC+TGG | + | chr7_3:58425649-58425668 | None:intergenic | 40.0% | |
| AGCAGAAGTGATCCTTCTAA+AGG | - | chr7_3:58425648-58425667 | Msa1112440:intron | 40.0% | |
| GCAGAAGTGATCCTTCTAAA+GGG | - | chr7_3:58425649-58425668 | Msa1112440:intron | 40.0% | |
| AGTGAAAGAGACATGACAGT+TGG | + | chr7_3:58425675-58425694 | None:intergenic | 40.0% | |
| ! | CGTGAGAGGAACAATGTTTT+GGG | + | chr7_3:58425707-58425726 | None:intergenic | 40.0% |
| CCAAAACATTGTTCCTCTCA+CGG | - | chr7_3:58425705-58425724 | Msa1112440:intron | 40.0% | |
| CAAAACATTGTTCCTCTCAC+GGG | - | chr7_3:58425706-58425725 | Msa1112440:intron | 40.0% | |
| AAAACATTGTTCCTCTCACG+GGG | - | chr7_3:58425707-58425726 | Msa1112440:intron | 40.0% | |
| AAGGACTTCTAGGTAACGTT+TGG | + | chr7_3:58426038-58426057 | None:intergenic | 40.0% | |
| GAAGTCCTTTGTAGTGATTG+AGG | - | chr7_3:58426049-58426068 | Msa1112440:intron | 40.0% | |
| !! | GTAGTGATTGAGGTTTTGTG+GGG | - | chr7_3:58426059-58426078 | Msa1112440:intron | 40.0% |
| CACGAAATCGCATGAAAACT+CGG | - | chr7_3:58426718-58426737 | Msa1112440:intron | 40.0% | |
| TTATGCAGGCATTAGCAGAA+TGG | - | chr7_3:58427456-58427475 | Msa1112440:CDS | 40.0% | |
| TATGCAGGCATTAGCAGAAT+GGG | - | chr7_3:58427457-58427476 | Msa1112440:CDS | 40.0% | |
| CTATATCATGCTTGTGACGT+AGG | - | chr7_3:58427512-58427531 | Msa1112440:intron | 40.0% | |
| TCTTACAGTTCATGGACTTC+TGG | - | chr7_3:58427561-58427580 | Msa1112440:intron | 40.0% | |
| TGGCTGTAACAAATGCAACT+AGG | - | chr7_3:58427687-58427706 | Msa1112440:intron | 40.0% | |
| TCTCACTTGATTTCTCTCAC+TGG | - | chr7_3:58427938-58427957 | Msa1112440:intron | 40.0% | |
| TGCAACATAGTAGCAATCGA+TGG | - | chr7_3:58428018-58428037 | Msa1112440:intron | 40.0% | |
| CGAGGATTGATTGACAACAA+CGG | + | chr7_3:58428101-58428120 | None:intergenic | 40.0% | |
| ! | TGATCGGCCATGAAACTTTT+GGG | + | chr7_3:58428136-58428155 | None:intergenic | 40.0% |
| TTGAGGAACAACCTTGTTAG+TGG | + | chr7_3:58428331-58428350 | None:intergenic | 40.0% | |
| CGATGGCTATGTAATCTTGT+TGG | - | chr7_3:58428399-58428418 | Msa1112440:intron | 40.0% | |
| ! | TTGTTGGGTCACTTCTAAGA+CGG | - | chr7_3:58428415-58428434 | Msa1112440:intron | 40.0% |
| GAAAAACCAGCTAAGGCAAA+AGG | + | chr7_3:58428450-58428469 | None:intergenic | 40.0% | |
| ! | TGGTTTTTCTGCACTGTCAA+TGG | - | chr7_3:58428461-58428480 | Msa1112440:intron | 40.0% |
| TGTCAATGGCAATAGTAAGC+TGG | - | chr7_3:58428475-58428494 | Msa1112440:intron | 40.0% | |
| CCAAAACCAGTAAGTTTCAC+TGG | + | chr7_3:58428511-58428530 | None:intergenic | 40.0% | |
| !!! | CCAGTGAAACTTACTGGTTT+TGG | - | chr7_3:58428508-58428527 | Msa1112440:intron | 40.0% |
| GGTAAAAATTGAGGAGGGAA+AGG | + | chr7_3:58428559-58428578 | None:intergenic | 40.0% | |
| AAACTATGAACTGACCCATC+AGG | - | chr7_3:58428716-58428735 | Msa1112440:intron | 40.0% | |
| ! | GTTGCAGAGGTGAATCATTT+TGG | - | chr7_3:58428802-58428821 | Msa1112440:intron | 40.0% |
| GCACAAAAATGTGTGGCTAA+CGG | - | chr7_3:58428872-58428891 | Msa1112440:intron | 40.0% | |
| AAATGTGTGGCTAACGGTAT+TGG | - | chr7_3:58428878-58428897 | Msa1112440:intron | 40.0% | |
| GATGTGAATCGGTGTATGTT+CGG | - | chr7_3:58428900-58428919 | Msa1112440:intron | 40.0% | |
| ! | AAGCATACTGACTGCTGAAT+TGG | - | chr7_3:58429013-58429032 | Msa1112440:intron | 40.0% |
| ! | CATCCTAGGAGTCAATTTTG+CGG | - | chr7_3:58429045-58429064 | Msa1112440:intron | 40.0% |
| TTTGCGGCTAAAAACAGTGA+AGG | - | chr7_3:58429061-58429080 | Msa1112440:intron | 40.0% | |
| TTGCGGCTAAAAACAGTGAA+GGG | - | chr7_3:58429062-58429081 | Msa1112440:intron | 40.0% | |
| !! | TTTTTGGTGAGGGGATAAAG+AGG | - | chr7_3:58429186-58429205 | Msa1112440:CDS | 40.0% |
| GTGCTTCTTCTCTCTGCAAA+TGG | - | chr7_3:58420605-58420624 | Msa1112440:three_prime_UTR | 45.0% | |
| AATGGCGAATCCAGCAGTAA+AGG | - | chr7_3:58420623-58420642 | Msa1112440:three_prime_UTR | 45.0% | |
| AGGGTCTGAGTCTAGTATGA+GGG | + | chr7_3:58420679-58420698 | None:intergenic | 45.0% | |
| AAGGGTCTGAGTCTAGTATG+AGG | + | chr7_3:58420680-58420699 | None:intergenic | 45.0% | |
| CTTCAGCTGCAAAGTCTATG+TGG | - | chr7_3:58420849-58420868 | Msa1112440:three_prime_UTR | 45.0% | |
| !! | GGATAAGTTGGTCATTGGGT+CGG | + | chr7_3:58421126-58421145 | None:intergenic | 45.0% |
| ACCCAATGACCAACTTATCC+AGG | - | chr7_3:58421126-58421145 | Msa1112440:CDS | 45.0% | |
| !! | CCCTGGATAAGTTGGTCATT+GGG | + | chr7_3:58421130-58421149 | None:intergenic | 45.0% |
| CCCAATGACCAACTTATCCA+GGG | - | chr7_3:58421127-58421146 | Msa1112440:CDS | 45.0% | |
| CCAATGACCAACTTATCCAG+GGG | - | chr7_3:58421128-58421147 | Msa1112440:CDS | 45.0% | |
| CAATGACCAACTTATCCAGG+GGG | - | chr7_3:58421129-58421148 | Msa1112440:CDS | 45.0% | |
| ATTGATCCCCCTGGATAAGT+TGG | + | chr7_3:58421138-58421157 | None:intergenic | 45.0% | |
| AATCCCACTGTCCACTATTG+AGG | - | chr7_3:58421155-58421174 | Msa1112440:CDS | 45.0% | |
| ATCCCACTGTCCACTATTGA+GGG | - | chr7_3:58421156-58421175 | Msa1112440:CDS | 45.0% | |
| TATGCTCCTCTCTAGGTTTC+GGG | + | chr7_3:58421256-58421275 | None:intergenic | 45.0% | |
| GTATGCTCCTCTCTAGGTTT+CGG | + | chr7_3:58421257-58421276 | None:intergenic | 45.0% | |
| GCGAACTGTCAAGCTTATAG+TGG | - | chr7_3:58421409-58421428 | Msa1112440:CDS | 45.0% | |
| CTCTGCTTGGTAAAAAGCAG+TGG | + | chr7_3:58421668-58421687 | None:intergenic | 45.0% | |
| GACATTGCAGAAAACCATGG+CGG | + | chr7_3:58422005-58422024 | None:intergenic | 45.0% | |
| ATGTTTAAGGGATCTGGCAG+TGG | + | chr7_3:58422379-58422398 | None:intergenic | 45.0% | |
| AAGATTCAGCTGTCTCAGGT+AGG | - | chr7_3:58422407-58422426 | Msa1112440:intron | 45.0% | |
| ! | CTCTGTTCCCCATTTTCTTC+AGG | - | chr7_3:58422710-58422729 | Msa1112440:intron | 45.0% |
| ACTGCTAACCACTTGGTCAT+AGG | - | chr7_3:58423574-58423593 | Msa1112440:CDS | 45.0% | |
| CTGCTAACCACTTGGTCATA+GGG | - | chr7_3:58423575-58423594 | Msa1112440:intron | 45.0% | |
| TGCTAACCACTTGGTCATAG+GGG | - | chr7_3:58423576-58423595 | Msa1112440:intron | 45.0% | |
| ! | CATCTATGTTGCTTGGGGAT+CGG | - | chr7_3:58423677-58423696 | Msa1112440:intron | 45.0% |
| ! | TCAATGGCATTGGACCTACA+AGG | - | chr7_3:58423803-58423822 | Msa1112440:intron | 45.0% |
| ATCTTCGACTGTGTCCTTGT+AGG | + | chr7_3:58423820-58423839 | None:intergenic | 45.0% | |
| TACAAGGACACAGTCGAAGA+TGG | - | chr7_3:58423819-58423838 | Msa1112440:intron | 45.0% | |
| ATGTCAAGCCCTTGGCATAT+AGG | + | chr7_3:58424325-58424344 | None:intergenic | 45.0% | |
| CACGGTTATATTGGCACCAA+AGG | + | chr7_3:58424578-58424597 | None:intergenic | 45.0% | |
| !! | CTTTGGTGCCAATATAACCG+TGG | - | chr7_3:58424576-58424595 | Msa1112440:intron | 45.0% |
| GCATGCTTCCACGGTTATAT+TGG | + | chr7_3:58424587-58424606 | None:intergenic | 45.0% | |
| GTGCATGAGAACGGATAAAC+TGG | + | chr7_3:58424646-58424665 | None:intergenic | 45.0% | |
| ATCCCACATGCTTCAATGCT+CGG | - | chr7_3:58425074-58425093 | Msa1112440:CDS | 45.0% | |
| !! | AACCGAGCATTGAAGCATGT+GGG | + | chr7_3:58425079-58425098 | None:intergenic | 45.0% |
| ACATGCTTCAATGCTCGGTT+GGG | - | chr7_3:58425079-58425098 | Msa1112440:CDS | 45.0% | |
| GGCTGGACCAAATTGTACAA+TGG | - | chr7_3:58425104-58425123 | Msa1112440:CDS | 45.0% | |
| GTGTAGACATTTGTACGGAG+AGG | - | chr7_3:58425228-58425247 | Msa1112440:CDS | 45.0% | |
| TAAGATGCTCCAGAACCAAC+CGG | + | chr7_3:58425282-58425301 | None:intergenic | 45.0% | |
| GATTGCCGTCTCTTATTAGC+TGG | - | chr7_3:58425481-58425500 | Msa1112440:intron | 45.0% | |
| !! | TGTATGCTAGAGAAGGCACT+TGG | - | chr7_3:58425598-58425617 | Msa1112440:intron | 45.0% |
| !! | GTATGCTAGAGAAGGCACTT+GGG | - | chr7_3:58425599-58425618 | Msa1112440:intron | 45.0% |
| !! | TATGCTAGAGAAGGCACTTG+GGG | - | chr7_3:58425600-58425619 | Msa1112440:intron | 45.0% |
| ATGACAGTTGGCCCTTTAGA+AGG | + | chr7_3:58425663-58425682 | None:intergenic | 45.0% | |
| ! | CCGTGAGAGGAACAATGTTT+TGG | + | chr7_3:58425708-58425727 | None:intergenic | 45.0% |
| AAATTTACAGTCCCCGTGAG+AGG | + | chr7_3:58425721-58425740 | None:intergenic | 45.0% | |
| CAAGTGGCTTGACATCATAC+AGG | - | chr7_3:58425751-58425770 | Msa1112440:intron | 45.0% | |
| GATAGTGCGGTTTGATCCAA+CGG | - | chr7_3:58426806-58426825 | Msa1112440:intron | 45.0% | |
| !!! | TGGGTTTTGTTCACATCCAG+TGG | - | chr7_3:58427476-58427495 | Msa1112440:CDS | 45.0% |
| TAAGGATAGCAACAGCTGTG+TGG | + | chr7_3:58427658-58427677 | None:intergenic | 45.0% | |
| TGCTATCCTTACTGCCCTAA+TGG | - | chr7_3:58427667-58427686 | Msa1112440:intron | 45.0% | |
| TTACAGCCATTAGGGCAGTA+AGG | + | chr7_3:58427676-58427695 | None:intergenic | 45.0% | |
| GCTTGGTCTCCTAATTGGAT+GGG | - | chr7_3:58427867-58427886 | Msa1112440:intron | 45.0% | |
| TCCAACCCCCAAAAGTTTCA+TGG | - | chr7_3:58428126-58428145 | Msa1112440:intron | 45.0% | |
| ! | ATCGGCCATGAAACTTTTGG+GGG | + | chr7_3:58428134-58428153 | None:intergenic | 45.0% |
| ! | GATCGGCCATGAAACTTTTG+GGG | + | chr7_3:58428135-58428154 | None:intergenic | 45.0% |
| ! | GTGATCGGCCATGAAACTTT+TGG | + | chr7_3:58428137-58428156 | None:intergenic | 45.0% |
| AAAGTTTCATGGCCGATCAC+CGG | - | chr7_3:58428137-58428156 | Msa1112440:intron | 45.0% | |
| TACATGTGTCAGTGTCGTGT+CGG | + | chr7_3:58428208-58428227 | None:intergenic | 45.0% | |
| TGTCAGTGTAGTGTCGTATC+AGG | - | chr7_3:58428275-58428294 | Msa1112440:intron | 45.0% | |
| ! | CTATGAAGCACTCACAGACA+CGG | + | chr7_3:58428304-58428323 | None:intergenic | 45.0% |
| CAGTGCAGAAAAACCAGCTA+AGG | + | chr7_3:58428457-58428476 | None:intergenic | 45.0% | |
| TCTTGGAAGTGAGTCCTGAT+GGG | + | chr7_3:58428733-58428752 | None:intergenic | 45.0% | |
| TTCTTGGAAGTGAGTCCTGA+TGG | + | chr7_3:58428734-58428753 | None:intergenic | 45.0% | |
| TGGTGTAAAAAGGGTTGCAG+AGG | - | chr7_3:58428789-58428808 | Msa1112440:intron | 45.0% | |
| GAGTTCATGTGATGTGAAGG+TGG | - | chr7_3:58428850-58428869 | Msa1112440:intron | 45.0% | |
| GAAGGTGGCACAAAAATGTG+TGG | - | chr7_3:58428865-58428884 | Msa1112440:intron | 45.0% | |
| ! | TAGCCGCAAAATTGACTCCT+AGG | + | chr7_3:58429051-58429070 | None:intergenic | 45.0% |
| !! | ATTTATTAATTACTTATTAA+TGG | - | chr7_3:58427026-58427045 | Msa1112440:intron | 5.0% |
| AGTATGAGGGTAGCTGAAGC+TGG | + | chr7_3:58420666-58420685 | None:intergenic | 50.0% | |
| !! | CCCCTGGATAAGTTGGTCAT+TGG | + | chr7_3:58421131-58421150 | None:intergenic | 50.0% |
| TTCAATGGGGCCCTCAATAG+TGG | + | chr7_3:58421169-58421188 | None:intergenic | 50.0% | |
| GCGTCAACAACTCTTGTGTC+GGG | + | chr7_3:58421219-58421238 | None:intergenic | 50.0% | |
| GGCGTCAACAACTCTTGTGT+CGG | + | chr7_3:58421220-58421239 | None:intergenic | 50.0% | |
| ACACAAGAGTTGTTGACGCC+TGG | - | chr7_3:58421220-58421239 | Msa1112440:intron | 50.0% | |
| TTCGAACCCGAAACCTAGAG+AGG | - | chr7_3:58421247-58421266 | Msa1112440:intron | 50.0% | |
| ! | ATGAGTTGACCTGGTGGTGA+AGG | + | chr7_3:58421294-58421313 | None:intergenic | 50.0% |
| TTCACCACCAGGTCAACTCA+TGG | - | chr7_3:58421293-58421312 | Msa1112440:CDS | 50.0% | |
| ! | TTAGCCTCCATGAGTTGACC+TGG | + | chr7_3:58421303-58421322 | None:intergenic | 50.0% |
| !! | CTTCAGTTGATTTGCCGCCA+TGG | - | chr7_3:58421988-58422007 | Msa1112440:intron | 50.0% |
| TTTAAGGGATCTGGCAGTGG+AGG | + | chr7_3:58422376-58422395 | None:intergenic | 50.0% | |
| AACTTCAGCACAAGGCAGAG+CGG | + | chr7_3:58423516-58423535 | None:intergenic | 50.0% | |
| ! | GGCTCTGATATGCGATGTCT+AGG | - | chr7_3:58423597-58423616 | Msa1112440:intron | 50.0% |
| ! | TCTCCAGGTGTTTGGTTCGT+TGG | - | chr7_3:58423775-58423794 | Msa1112440:intron | 50.0% |
| AGACCAACGAACCAAACACC+TGG | + | chr7_3:58423781-58423800 | None:intergenic | 50.0% | |
| GGACACAGTCGAAGATGGTA+AGG | - | chr7_3:58423824-58423843 | Msa1112440:intron | 50.0% | |
| !! | TCACTGAAGGCATTGCACCA+TGG | + | chr7_3:58424912-58424931 | None:intergenic | 50.0% |
| !! | CAACCGAGCATTGAAGCATG+TGG | + | chr7_3:58425080-58425099 | None:intergenic | 50.0% |
| CACATGCTTCAATGCTCGGT+TGG | - | chr7_3:58425078-58425097 | Msa1112440:CDS | 50.0% | |
| !!! | AGAGAAGGCACTTGGGGTTT+TGG | - | chr7_3:58425606-58425625 | Msa1112440:intron | 50.0% |
| GATCGCAAGAGCAAAAGCTG+AGG | + | chr7_3:58426216-58426235 | None:intergenic | 50.0% | |
| TGCTCTTGCGATCGAAACCA+TGG | - | chr7_3:58426223-58426242 | Msa1112440:intron | 50.0% | |
| TCTTGCGATCGAAACCATGG+AGG | - | chr7_3:58426226-58426245 | Msa1112440:intron | 50.0% | |
| ! | TGGAAGTATGGCCGCAACAT+TGG | + | chr7_3:58427295-58427314 | None:intergenic | 50.0% |
| GGCCATACTTCCAGCCTATT+GGG | - | chr7_3:58427302-58427321 | Msa1112440:intron | 50.0% | |
| AAGAACCACCTTCTGCCGAA+GGG | + | chr7_3:58427328-58427347 | None:intergenic | 50.0% | |
| AAAGAACCACCTTCTGCCGA+AGG | + | chr7_3:58427329-58427348 | None:intergenic | 50.0% | |
| ACATCCAGTGGAATTGCGAG+TGG | - | chr7_3:58427488-58427507 | Msa1112440:intron | 50.0% | |
| TAGTCCACTCGCAATTCCAC+TGG | + | chr7_3:58427495-58427514 | None:intergenic | 50.0% | |
| !! | GGACTTCTGGCTCTCTTTCA+TGG | - | chr7_3:58427574-58427593 | Msa1112440:intron | 50.0% |
| ! | GTGATAGTGATTGGTGCGCT+TGG | - | chr7_3:58427850-58427869 | Msa1112440:intron | 50.0% |
| CGCTTGGTCTCCTAATTGGA+TGG | - | chr7_3:58427866-58427885 | Msa1112440:intron | 50.0% | |
| TTTGGGGGTTGGAAAGAACG+AGG | + | chr7_3:58428119-58428138 | None:intergenic | 50.0% | |
| !! | GCCATGAAACTTTTGGGGGT+TGG | + | chr7_3:58428130-58428149 | None:intergenic | 50.0% |
| !! | TGATGTGAAGTGCCGGTGAT+CGG | + | chr7_3:58428152-58428171 | None:intergenic | 50.0% |
| TCACCGGCACTTCACATCAA+AGG | - | chr7_3:58428153-58428172 | Msa1112440:intron | 50.0% | |
| ACGCCTTTGATGTGAAGTGC+CGG | + | chr7_3:58428159-58428178 | None:intergenic | 50.0% | |
| ! | CTTCACATCAAAGGCGTGTC+CGG | - | chr7_3:58428162-58428181 | Msa1112440:intron | 50.0% |
| AACCAACAAGGGTCTGACAC+CGG | + | chr7_3:58428184-58428203 | None:intergenic | 50.0% | |
| GTCGTGTCGGAAACCAACAA+GGG | + | chr7_3:58428195-58428214 | None:intergenic | 50.0% | |
| TGTCGTGTCGGAAACCAACA+AGG | + | chr7_3:58428196-58428215 | None:intergenic | 50.0% | |
| CGTGTCTGTGAGTGCTTCAT+AGG | - | chr7_3:58428302-58428321 | Msa1112440:intron | 50.0% | |
| !! | CACTTCTAAGACGGTACCAC+TGG | - | chr7_3:58428424-58428443 | Msa1112440:intron | 50.0% |
| CAGGACTCACTTCCAAGAAG+TGG | - | chr7_3:58428735-58428754 | Msa1112440:intron | 50.0% | |
| GGCGAGTTCATGTGATGTGA+AGG | - | chr7_3:58428847-58428866 | Msa1112440:intron | 50.0% | |
| !! | GGCCCTCAATAGTGGACAGT+GGG | + | chr7_3:58421161-58421180 | None:intergenic | 55.0% |
| CAAGAGTTGTTGACGCCTGG+AGG | - | chr7_3:58421223-58421242 | Msa1112440:intron | 55.0% | |
| !! | GTTTCGGGTTCGAAACCTCC+AGG | + | chr7_3:58421241-58421260 | None:intergenic | 55.0% |
| ! | TGACCTGGTGGTGAAGGCTT+GGG | + | chr7_3:58421288-58421307 | None:intergenic | 55.0% |
| ! | TTGACCTGGTGGTGAAGGCT+TGG | + | chr7_3:58421289-58421308 | None:intergenic | 55.0% |
| ACCACCAGGTCAACTCATGG+AGG | - | chr7_3:58421296-58421315 | Msa1112440:CDS | 55.0% | |
| CTGTCTCAGGTAGGAGACCA+AGG | - | chr7_3:58422416-58422435 | Msa1112440:intron | 55.0% | |
| TCAGAGCCCCTATGACCAAG+TGG | + | chr7_3:58423585-58423604 | None:intergenic | 55.0% | |
| ! | CTTGGGGATCGGTTAGTTGC+AGG | - | chr7_3:58423688-58423707 | Msa1112440:intron | 55.0% |
| ! | TGGCACCAAAGGAGTACGCT+GGG | + | chr7_3:58424567-58424586 | None:intergenic | 55.0% |
| ! | TTGGCACCAAAGGAGTACGC+TGG | + | chr7_3:58424568-58424587 | None:intergenic | 55.0% |
| !! | TGTGACGGCTTGCTATTCGG+TGG | - | chr7_3:58425050-58425069 | Msa1112440:CDS | 55.0% |
| GCTTCAATGCTCGGTTGGGA+AGG | - | chr7_3:58425083-58425102 | Msa1112440:CDS | 55.0% | |
| CGCTACAGTCAATGCCTCCA+TGG | + | chr7_3:58426243-58426262 | None:intergenic | 55.0% | |
| CGGCCATACTTCCAGCCTAT+TGG | - | chr7_3:58427301-58427320 | Msa1112440:intron | 55.0% | |
| GGCCCAATAGGCTGGAAGTA+TGG | + | chr7_3:58427307-58427326 | None:intergenic | 55.0% | |
| TTCCAGCCTATTGGGCCCTT+CGG | - | chr7_3:58427310-58427329 | Msa1112440:intron | 55.0% | |
| ATGCTTGTGACGTAGGTGCC+TGG | - | chr7_3:58427519-58427538 | Msa1112440:intron | 55.0% | |
| GGTGCGCTTGGTCTCCTAAT+TGG | - | chr7_3:58427862-58427881 | Msa1112440:intron | 55.0% | |
| CAGCTAAGGCAAAAGGCCAG+TGG | + | chr7_3:58428443-58428462 | None:intergenic | 55.0% | |
| !!! | CACTGGCCTTTTGCCTTAGC+TGG | - | chr7_3:58428441-58428460 | Msa1112440:intron | 55.0% |
| GACAGTGGGATTGATCCCCC+TGG | + | chr7_3:58421147-58421166 | None:intergenic | 60.0% | |
| !! | GGGCCCTCAATAGTGGACAG+TGG | + | chr7_3:58421162-58421181 | None:intergenic | 60.0% |
| ! | GCCTCCATGAGTTGACCTGG+TGG | + | chr7_3:58421300-58421319 | None:intergenic | 60.0% |
| CCTCGGACAATCTGCAGAGG+TGG | + | chr7_3:58424544-58424563 | None:intergenic | 60.0% | |
| CCACCTCTGCAGATTGTCCG+AGG | - | chr7_3:58424541-58424560 | Msa1112440:CDS | 60.0% | |
| ! | CAAAGGAGTACGCTGGGCCT+CGG | + | chr7_3:58424561-58424580 | None:intergenic | 60.0% |
| CAATGCTCGGTTGGGAAGGC+TGG | - | chr7_3:58425087-58425106 | Msa1112440:CDS | 60.0% | |
| GACATTCCTCGTGGTGCAGC+CGG | - | chr7_3:58425390-58425409 | Msa1112440:intron | 60.0% | |
| CTTCTGCCGAAGGGCCCAAT+AGG | + | chr7_3:58427319-58427338 | None:intergenic | 60.0% | |
| CTATTGGGCCCTTCGGCAGA+AGG | - | chr7_3:58427317-58427336 | Msa1112440:intron | 60.0% | |
| ! | GTCCGGTGTCAGACCCTTGT+TGG | - | chr7_3:58428179-58428198 | Msa1112440:intron | 60.0% |
| GGTCCCAAGCCTTCACCACC+AGG | - | chr7_3:58421282-58421301 | Msa1112440:CDS | 65.0% | |
| GGGCCTCGGACAATCTGCAG+AGG | + | chr7_3:58424547-58424566 | None:intergenic | 65.0% | |
| CGAGGCCCAGCGTACTCCTT+TGG | - | chr7_3:58424559-58424578 | Msa1112440:CDS | 65.0% | |
| ATTCCTCGTGGTGCAGCCGG+AGG | - | chr7_3:58425393-58425412 | Msa1112440:intron | 65.0% | |
| TTTCCTCCGGCTGCACCACG+AGG | + | chr7_3:58425399-58425418 | None:intergenic | 65.0% | |
| TGCCGAAGGGCCCAATAGGC+TGG | + | chr7_3:58427315-58427334 | None:intergenic | 65.0% | |
| TTGGGCCCTTCGGCAGAAGG+TGG | - | chr7_3:58427320-58427339 | Msa1112440:intron | 65.0% | |
| TGCGTGCGTGCGTGCGTGCA+TGG | - | chr7_3:58427737-58427756 | Msa1112440:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 58420438 | 58429374 | 58420438 | ID=Msa1112440;Name=Msa1112440 |
| chr7_3 | mRNA | 58420438 | 58429374 | 58420438 | ID=Msa1112440-mRNA-1;Parent=Msa1112440;Name=Msa1112440-mRNA-1;_AED=0.08;_eAED=0.08;_QI=134|0.83|0.84|1|1|1|13|613|816 |
| chr7_3 | exon | 58420438 | 58421189 | 58420438 | ID=Msa1112440-mRNA-1:exon:12831;Parent=Msa1112440-mRNA-1 |
| chr7_3 | exon | 58421277 | 58421429 | 58421277 | ID=Msa1112440-mRNA-1:exon:12830;Parent=Msa1112440-mRNA-1 |
| chr7_3 | exon | 58421853 | 58421981 | 58421853 | ID=Msa1112440-mRNA-1:exon:12829;Parent=Msa1112440-mRNA-1 |
| chr7_3 | exon | 58422104 | 58422348 | 58422104 | ID=Msa1112440-mRNA-1:exon:12828;Parent=Msa1112440-mRNA-1 |
| chr7_3 | exon | 58422474 | 58422553 | 58422474 | ID=Msa1112440-mRNA-1:exon:12827;Parent=Msa1112440-mRNA-1 |
| chr7_3 | exon | 58423529 | 58423593 | 58423529 | ID=Msa1112440-mRNA-1:exon:12826;Parent=Msa1112440-mRNA-1 |
| chr7_3 | exon | 58424040 | 58424578 | 58424040 | ID=Msa1112440-mRNA-1:exon:12825;Parent=Msa1112440-mRNA-1 |
| chr7_3 | exon | 58424669 | 58425259 | 58424669 | ID=Msa1112440-mRNA-1:exon:12824;Parent=Msa1112440-mRNA-1 |
| chr7_3 | exon | 58425972 | 58426040 | 58425972 | ID=Msa1112440-mRNA-1:exon:12823;Parent=Msa1112440-mRNA-1 |
| chr7_3 | exon | 58427028 | 58427080 | 58427028 | ID=Msa1112440-mRNA-1:exon:12822;Parent=Msa1112440-mRNA-1 |
| chr7_3 | exon | 58427388 | 58427505 | 58427388 | ID=Msa1112440-mRNA-1:exon:12821;Parent=Msa1112440-mRNA-1 |
| chr7_3 | exon | 58427697 | 58427818 | 58427697 | ID=Msa1112440-mRNA-1:exon:12820;Parent=Msa1112440-mRNA-1 |
| chr7_3 | exon | 58429093 | 58429374 | 58429093 | ID=Msa1112440-mRNA-1:exon:12819;Parent=Msa1112440-mRNA-1 |
| chr7_3 | five_prime_UTR | 58429241 | 58429374 | 58429241 | ID=Msa1112440-mRNA-1:five_prime_utr;Parent=Msa1112440-mRNA-1 |
| chr7_3 | CDS | 58429093 | 58429240 | 58429093 | ID=Msa1112440-mRNA-1:cds;Parent=Msa1112440-mRNA-1 |
| chr7_3 | CDS | 58427697 | 58427818 | 58427697 | ID=Msa1112440-mRNA-1:cds;Parent=Msa1112440-mRNA-1 |
| chr7_3 | CDS | 58427388 | 58427505 | 58427388 | ID=Msa1112440-mRNA-1:cds;Parent=Msa1112440-mRNA-1 |
| chr7_3 | CDS | 58427028 | 58427080 | 58427028 | ID=Msa1112440-mRNA-1:cds;Parent=Msa1112440-mRNA-1 |
| chr7_3 | CDS | 58425972 | 58426040 | 58425972 | ID=Msa1112440-mRNA-1:cds;Parent=Msa1112440-mRNA-1 |
| chr7_3 | CDS | 58424669 | 58425259 | 58424669 | ID=Msa1112440-mRNA-1:cds;Parent=Msa1112440-mRNA-1 |
| chr7_3 | CDS | 58424040 | 58424578 | 58424040 | ID=Msa1112440-mRNA-1:cds;Parent=Msa1112440-mRNA-1 |
| chr7_3 | CDS | 58423529 | 58423593 | 58423529 | ID=Msa1112440-mRNA-1:cds;Parent=Msa1112440-mRNA-1 |
| chr7_3 | CDS | 58422474 | 58422553 | 58422474 | ID=Msa1112440-mRNA-1:cds;Parent=Msa1112440-mRNA-1 |
| chr7_3 | CDS | 58422104 | 58422348 | 58422104 | ID=Msa1112440-mRNA-1:cds;Parent=Msa1112440-mRNA-1 |
| chr7_3 | CDS | 58421853 | 58421981 | 58421853 | ID=Msa1112440-mRNA-1:cds;Parent=Msa1112440-mRNA-1 |
| chr7_3 | CDS | 58421277 | 58421429 | 58421277 | ID=Msa1112440-mRNA-1:cds;Parent=Msa1112440-mRNA-1 |
| chr7_3 | CDS | 58421051 | 58421189 | 58421051 | ID=Msa1112440-mRNA-1:cds;Parent=Msa1112440-mRNA-1 |
| chr7_3 | three_prime_UTR | 58420438 | 58421050 | 58420438 | ID=Msa1112440-mRNA-1:three_prime_utr;Parent=Msa1112440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
