Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1113760 | XP_003625012.1 | 100.000 | 482 | 0 | 0 | 1 | 482 | 1 | 482 | 0.0 | 993 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1113760 | sp|Q2HW56|NOOT1_MEDTR | 100.000 | 482 | 0 | 0 | 1 | 482 | 1 | 482 | 0.0 | 993 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1113760 | A0A1S2XRJ0 | 88.595 | 491 | 38 | 10 | 1 | 482 | 1 | 482 | 0.0 | 813 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1113760 | TR | TRAF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1113760 | Msa1160460 | 0.871313 | 7.517852e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1113760 | MtrunA17_Chr7g0256321 | 100.000 | 482 | 0 | 0 | 1 | 482 | 1 | 482 | 0.0 | 993 |
| Msa1113760 | MtrunA17_Chr1g0171771 | 79.208 | 505 | 69 | 8 | 1 | 482 | 1 | 492 | 0.0 | 727 |
| Msa1113760 | MtrunA17_Chr5g0442661 | 34.239 | 368 | 212 | 9 | 24 | 386 | 66 | 408 | 1.41e-51 | 184 |
| Msa1113760 | MtrunA17_Chr2g0291741 | 35.156 | 384 | 222 | 9 | 6 | 386 | 44 | 403 | 2.66e-50 | 180 |
| Msa1113760 | MtrunA17_Chr2g0299621 | 30.376 | 372 | 216 | 7 | 24 | 388 | 65 | 400 | 3.19e-33 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1113760 | AT2G41370.1 | 78.893 | 488 | 76 | 10 | 3 | 478 | 4 | 476 | 0.0 | 744 |
| Msa1113760 | AT3G57130.1 | 75.625 | 480 | 82 | 8 | 2 | 476 | 4 | 453 | 0.0 | 713 |
| Msa1113760 | AT3G57130.2 | 75.301 | 166 | 33 | 2 | 2 | 162 | 4 | 166 | 2.39e-83 | 255 |
| Msa1113760 | AT4G19660.1 | 31.880 | 367 | 208 | 7 | 25 | 386 | 56 | 385 | 5.41e-46 | 169 |
| Msa1113760 | AT4G19660.2 | 31.880 | 367 | 208 | 7 | 25 | 386 | 56 | 385 | 7.69e-46 | 169 |
| Msa1113760 | AT5G45110.1 | 30.990 | 384 | 234 | 8 | 6 | 386 | 40 | 395 | 4.53e-42 | 158 |
| Msa1113760 | AT5G45110.2 | 30.990 | 384 | 234 | 8 | 6 | 386 | 40 | 395 | 7.60e-42 | 156 |
| Msa1113760 | AT1G64280.1 | 29.132 | 357 | 221 | 6 | 32 | 386 | 73 | 399 | 8.08e-33 | 132 |
| Msa1113760 | AT4G26120.1 | 29.640 | 361 | 209 | 9 | 33 | 386 | 76 | 398 | 1.28e-31 | 128 |
| Msa1113760 | AT4G26120.2 | 29.640 | 361 | 209 | 9 | 33 | 386 | 77 | 399 | 1.38e-31 | 128 |
Find 154 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATAGAAAATCTGAAGTT+AGG | 0.230108 | 7_3:+60231120 | None:intergenic |
| GATGCGAAGCTCTTCGATTT+TGG | 0.235029 | 7_3:+60231556 | None:intergenic |
| TGTGGGCCAGACCCACCTTC+TGG | 0.259914 | 7_3:-60233425 | Msa1113760:CDS |
| GACATGATTGTTTAGGGTTA+TGG | 0.282175 | 7_3:+60233605 | None:intergenic |
| TTCAAGGGACATGATTGTTT+AGG | 0.311764 | 7_3:+60233598 | None:intergenic |
| AAACACAACCTTAGTTTGTT+TGG | 0.315039 | 7_3:+60231065 | None:intergenic |
| TCAAGGGACATGATTGTTTA+GGG | 0.321591 | 7_3:+60233599 | None:intergenic |
| AGATGAATTGAAATAATAAA+AGG | 0.323094 | 7_3:+60230178 | None:intergenic |
| ATGATGGTGGTGAGGCATTA+AGG | 0.333824 | 7_3:+60231511 | None:intergenic |
| AACAAGACATGCACCAACTA+TGG | 0.344045 | 7_3:-60231658 | Msa1113760:CDS |
| AATGGTGACTAGTATTTGAT+AGG | 0.346077 | 7_3:+60230406 | None:intergenic |
| CATTTGAAGTGCGGTTTCAT+AGG | 0.351916 | 7_3:-60230387 | Msa1113760:three_prime_UTR |
| ATAAAAGGAAGACAATAAAT+AGG | 0.353356 | 7_3:+60230193 | None:intergenic |
| CTAATGCTTCATCAAGGTTT+AGG | 0.354695 | 7_3:+60231366 | None:intergenic |
| AAACAAACTAAGGTTGTGTT+TGG | 0.362323 | 7_3:-60231063 | Msa1113760:CDS |
| GGAGATGGTCTCACCGGATA+TGG | 0.367743 | 7_3:-60231222 | Msa1113760:CDS |
| TGCAGCCGATGTTAACTTCC+CGG | 0.370396 | 7_3:-60231282 | Msa1113760:CDS |
| CTGTTCAACTCCGAAGTATC+TGG | 0.373003 | 7_3:+60233169 | None:intergenic |
| CAACCACGGTCACCACAATT+AGG | 0.374903 | 7_3:+60233248 | None:intergenic |
| AACTTCCCGGCTGGTCCAAC+TGG | 0.385231 | 7_3:-60231269 | Msa1113760:CDS |
| CCATCAACTGTTCTCACATT+CGG | 0.388403 | 7_3:+60231170 | None:intergenic |
| GGATGCATGGAGGAGACTTT+AGG | 0.401342 | 7_3:-60230296 | Msa1113760:three_prime_UTR |
| CATCAACTGTTCTCACATTC+GGG | 0.411634 | 7_3:+60231171 | None:intergenic |
| CTATTCAAAGGTGCTGTCCC+TGG | 0.412212 | 7_3:-60231104 | Msa1113760:CDS |
| CTGCAATTCTCAACGGCATA+AGG | 0.421725 | 7_3:+60231338 | None:intergenic |
| AGTACTTCCAGAATGGATTC+TGG | 0.422667 | 7_3:-60230837 | Msa1113760:CDS |
| AGAAGTTGTGAAAGCCTTGT+TGG | 0.425240 | 7_3:-60231312 | Msa1113760:CDS |
| CTATGAAACCGCACTTCAAA+TGG | 0.425279 | 7_3:+60230388 | None:intergenic |
| TGTTATTGTTGTTGTGGCTA+TGG | 0.425330 | 7_3:+60230907 | None:intergenic |
| GAGATCTTAGTGAGTCTTCA+AGG | 0.426128 | 7_3:+60233582 | None:intergenic |
| GGGTTGACTCGGTTTCCTGA+TGG | 0.427587 | 7_3:+60233395 | None:intergenic |
| ATTGAAAATAATTGAGAAAG+TGG | 0.429644 | 7_3:+60230144 | None:intergenic |
| GAATAGAAAATCTGAAGTTA+GGG | 0.433840 | 7_3:+60231121 | None:intergenic |
| TCGTAACCAACTGAGTTAAC+TGG | 0.436058 | 7_3:+60233344 | None:intergenic |
| GGTTGACTCGGTTTCCTGAT+GGG | 0.440013 | 7_3:+60233396 | None:intergenic |
| AACACCAGACCTAGCTGAAC+CGG | 0.442219 | 7_3:+60233370 | None:intergenic |
| AGCAATACAGCCACCATATC+CGG | 0.442702 | 7_3:+60231209 | None:intergenic |
| TTCTTCAGAAAATTCTTCTG+TGG | 0.443436 | 7_3:-60233443 | Msa1113760:CDS |
| CTAGTGAAACTCATGGTAAT+GGG | 0.452837 | 7_3:-60231395 | Msa1113760:CDS |
| GCTAGTGAAACTCATGGTAA+TGG | 0.456091 | 7_3:-60231396 | Msa1113760:CDS |
| TCTAATCCAGAAGGTGGGTC+TGG | 0.456640 | 7_3:+60233419 | None:intergenic |
| ATCATCACCAGAATCCATTC+TGG | 0.457230 | 7_3:+60230830 | None:intergenic |
| ATCACATTTCCCATCCCAAC+AGG | 0.461625 | 7_3:-60233820 | None:intergenic |
| CATTAAGGAGCGGCGTGATA+AGG | 0.463719 | 7_3:+60231526 | None:intergenic |
| GGTTCAATGTGAGTTAATCC+AGG | 0.466615 | 7_3:+60231086 | None:intergenic |
| GATTGAAAGAGAGAGAGGTT+TGG | 0.467574 | 7_3:+60233636 | None:intergenic |
| GTTATACCAGTTAACTCAGT+TGG | 0.472537 | 7_3:-60233350 | Msa1113760:CDS |
| TCCCACCTTGTAGCAAAATC+AGG | 0.472615 | 7_3:-60231626 | Msa1113760:CDS |
| AATCCATGTTATTGTTGTTG+TGG | 0.476042 | 7_3:+60230901 | None:intergenic |
| TTGAAAATAATTGAGAAAGT+GGG | 0.483260 | 7_3:+60230145 | None:intergenic |
| TTCTGGATTGAAAGAGAGAG+AGG | 0.486141 | 7_3:+60233631 | None:intergenic |
| CTTGTTATGTCAAGGGAAGA+AGG | 0.491332 | 7_3:-60231020 | Msa1113760:CDS |
| AGTGCGGTTTCATAGGAGAA+TGG | 0.494407 | 7_3:-60230380 | Msa1113760:three_prime_UTR |
| GCCGATGTTAACTTCCCGGC+TGG | 0.496241 | 7_3:-60231278 | Msa1113760:CDS |
| AGTTGATGGTGTTACACCCT+TGG | 0.497853 | 7_3:-60231156 | Msa1113760:CDS |
| GTGCGGTTTCATAGGAGAAT+GGG | 0.501672 | 7_3:-60230379 | Msa1113760:three_prime_UTR |
| ATTGTGGTGACCGTGGTTGT+TGG | 0.504368 | 7_3:-60233244 | Msa1113760:CDS |
| TTTCCTAATCATATAAAAGA+TGG | 0.505963 | 7_3:+60230106 | None:intergenic |
| TATGGAGGGGTATACCTGTT+GGG | 0.509746 | 7_3:+60233806 | None:intergenic |
| ACAACAATAACATGGATTCA+AGG | 0.512387 | 7_3:-60230896 | Msa1113760:CDS |
| TGAGGGATTCTTATATATGG+AGG | 0.512950 | 7_3:+60233791 | None:intergenic |
| TGAAAATAATTGAGAAAGTG+GGG | 0.516522 | 7_3:+60230146 | None:intergenic |
| TCTTCAGAAAATTCTTCTGT+GGG | 0.516918 | 7_3:-60233442 | Msa1113760:CDS |
| CTTGCAGCCGCCAGATACTT+CGG | 0.517856 | 7_3:-60233179 | Msa1113760:CDS |
| ACGCTTGTCCGTTGATGAGA+AGG | 0.520055 | 7_3:+60233540 | None:intergenic |
| CCGAATGTGAGAACAGTTGA+TGG | 0.521071 | 7_3:-60231170 | Msa1113760:CDS |
| CCTTCTGGATTAGACCCATC+AGG | 0.521120 | 7_3:-60233410 | Msa1113760:CDS |
| ACATTGAACCAAACAAACTA+AGG | 0.522706 | 7_3:-60231073 | Msa1113760:CDS |
| TGGTGGAAAGAAAGAAAGAA+AGG | 0.524105 | 7_3:+60233743 | None:intergenic |
| GCTACATATTGCAGCGGAGA+TGG | 0.524554 | 7_3:-60231237 | Msa1113760:CDS |
| GAGGGATTCTTATATATGGA+GGG | 0.525055 | 7_3:+60233792 | None:intergenic |
| GATCGGCTGCAGCGGTGAGA+TGG | 0.529263 | 7_3:+60231474 | None:intergenic |
| TGCTACAAGGTGGGAACATG+TGG | 0.531996 | 7_3:+60231634 | None:intergenic |
| CTGCAGCTCTTGTTATGTCA+AGG | 0.533449 | 7_3:-60231028 | Msa1113760:CDS |
| GTCTTCAAGATCGGCTGCAG+CGG | 0.535743 | 7_3:+60231466 | None:intergenic |
| TAGGGTTCTTAGAATGTCCA+AGG | 0.536805 | 7_3:+60231139 | None:intergenic |
| CCATCCGGTTCAGCTAGGTC+TGG | 0.539454 | 7_3:-60233374 | Msa1113760:CDS |
| GGAAACCGAGTCAACCCATC+CGG | 0.539988 | 7_3:-60233389 | Msa1113760:CDS |
| GGTCGTGATGGTGAGGATGA+TGG | 0.543235 | 7_3:+60231495 | None:intergenic |
| TCAAATGAGTACTTCCAGAA+TGG | 0.545724 | 7_3:-60230844 | Msa1113760:CDS |
| TACTTAAACCTTCTCATCAA+CGG | 0.546164 | 7_3:-60233548 | Msa1113760:CDS |
| ATGTATCATCATCACTCTCA+TGG | 0.548599 | 7_3:-60230774 | Msa1113760:CDS |
| AGGTTGGTGTATCTTAACCT+TGG | 0.550322 | 7_3:-60230876 | Msa1113760:CDS |
| GAGGGGTATACCTGTTGGGA+TGG | 0.551185 | 7_3:+60233810 | None:intergenic |
| TCACATTCGGGTCAGCGTGA+TGG | 0.551477 | 7_3:+60231183 | None:intergenic |
| CTGAACCGGATGGGTTGACT+CGG | 0.552813 | 7_3:+60233384 | None:intergenic |
| TATTGTTGTTGTGGCTATGG+TGG | 0.553140 | 7_3:+60230910 | None:intergenic |
| CAATAACATGGATTCAAGGT+TGG | 0.554832 | 7_3:-60230892 | Msa1113760:CDS |
| AGGGGTATACCTGTTGGGAT+GGG | 0.555350 | 7_3:+60233811 | None:intergenic |
| GGCCTAGGTTCATGTTTCTG+AGG | 0.555362 | 7_3:+60233269 | None:intergenic |
| TGCAGCGGAGATGGTCTCAC+CGG | 0.562963 | 7_3:-60231228 | Msa1113760:CDS |
| GTGATGATGATAATACTCAC+AGG | 0.563231 | 7_3:-60230815 | Msa1113760:CDS |
| ATATGGAGGGGTATACCTGT+TGG | 0.567656 | 7_3:+60233805 | None:intergenic |
| AAACTCATGGTAATGGGAGA+AGG | 0.568060 | 7_3:-60231389 | Msa1113760:CDS |
| ACAGCTTGCATTGCTCACTC+AGG | 0.569799 | 7_3:-60233150 | Msa1113760:intron |
| GGAAGACAATAAATAGGCCG+TGG | 0.570163 | 7_3:+60230199 | None:intergenic |
| GTAATGCTAATGCTTCATCA+AGG | 0.571238 | 7_3:+60231360 | None:intergenic |
| GTTCAATGTGAGTTAATCCA+GGG | 0.571864 | 7_3:+60231087 | None:intergenic |
| GTGAAAGCCTTGTTGGAACT+CGG | 0.572326 | 7_3:-60231305 | Msa1113760:CDS |
| ATGCTTCAGTTTCTGTACAG+TGG | 0.576559 | 7_3:-60233308 | Msa1113760:CDS |
| TTTCATTACATCTTCAATCG+AGG | 0.580013 | 7_3:+60231700 | None:intergenic |
| CTCGACGTCTGAGGAGTCGA+GGG | 0.584832 | 7_3:+60231418 | None:intergenic |
| TGCAGCTCTTGTTATGTCAA+GGG | 0.587236 | 7_3:-60231027 | Msa1113760:CDS |
| AAGAGCAAGATCAACGGCTG+AGG | 0.588511 | 7_3:+60233208 | None:intergenic |
| CGGTCACCACAATTAGGCCT+AGG | 0.589003 | 7_3:+60233254 | None:intergenic |
| TTCTCTACTGCAATTCTCAA+CGG | 0.590267 | 7_3:+60231331 | None:intergenic |
| TCAACCCATCCGGTTCAGCT+AGG | 0.592108 | 7_3:-60233379 | Msa1113760:CDS |
| CTAAGATGCATCTGTGTGCG+TGG | 0.593852 | 7_3:+60233480 | None:intergenic |
| GTAACTACTCTTACATGCAA+AGG | 0.595237 | 7_3:+60230730 | None:intergenic |
| TAAGGAGCGGCGTGATAAGG+AGG | 0.595576 | 7_3:+60231529 | None:intergenic |
| GGGAACATGTGGTCCATAGT+TGG | 0.598309 | 7_3:+60231645 | None:intergenic |
| GATGGGTCTAATCCAGAAGG+TGG | 0.598545 | 7_3:+60233413 | None:intergenic |
| ACAGAAACAACTAGCGAGCA+TGG | 0.599468 | 7_3:-60231732 | Msa1113760:intron |
| GAAAATAATTGAGAAAGTGG+GGG | 0.601706 | 7_3:+60230147 | None:intergenic |
| AGTTAACTCAGTTGGTTACG+AGG | 0.607152 | 7_3:-60233342 | Msa1113760:CDS |
| GATGGTCTCACCGGATATGG+TGG | 0.607668 | 7_3:-60231219 | Msa1113760:CDS |
| AGGGATTCTTATATATGGAG+GGG | 0.608413 | 7_3:+60233793 | None:intergenic |
| TGGAATGAAAGGATGCATGG+AGG | 0.610232 | 7_3:-60230306 | Msa1113760:three_prime_UTR |
| CAGCGGTGAGATGGTCGTGA+TGG | 0.610483 | 7_3:+60231483 | None:intergenic |
| CCAGACCTAGCTGAACCGGA+TGG | 0.611566 | 7_3:+60233374 | None:intergenic |
| GCTCGACGTCTGAGGAGTCG+AGG | 0.612628 | 7_3:+60231417 | None:intergenic |
| AGATCTTAGTGAGTCTTCAA+GGG | 0.612991 | 7_3:+60233583 | None:intergenic |
| TTTCACTAGCTCGACGTCTG+AGG | 0.613557 | 7_3:+60231409 | None:intergenic |
| GAAAGAAAGAAAGAAAGGAA+AGG | 0.615472 | 7_3:+60233748 | None:intergenic |
| ACTAGTCACCATTTGAAGTG+CGG | 0.618264 | 7_3:-60230396 | Msa1113760:three_prime_UTR |
| TCTTCATTCATATTATGATG+AGG | 0.620406 | 7_3:+60230936 | None:intergenic |
| CCTGATGGGTCTAATCCAGA+AGG | 0.623455 | 7_3:+60233410 | None:intergenic |
| CAGACCTAGCTGAACCGGAT+GGG | 0.623790 | 7_3:+60233375 | None:intergenic |
| TGGTGAGGATGATGGTGGTG+AGG | 0.629304 | 7_3:+60231503 | None:intergenic |
| ATGAGAGTGATGATGATACA+TGG | 0.631388 | 7_3:+60230776 | None:intergenic |
| CGTGATGGTGAGGATGATGG+TGG | 0.631651 | 7_3:+60231498 | None:intergenic |
| CGTCGAGCTAGTGAAACTCA+TGG | 0.635542 | 7_3:-60231402 | Msa1113760:CDS |
| TAGCCACAACAACAATAACA+TGG | 0.640552 | 7_3:-60230904 | Msa1113760:CDS |
| CTGATGTGAAGCTAATACCA+CGG | 0.642043 | 7_3:-60230216 | Msa1113760:three_prime_UTR |
| CATGAACCTAGGCCTAATTG+TGG | 0.646688 | 7_3:-60233260 | Msa1113760:CDS |
| GGCTGCACCGAGTTCCAACA+AGG | 0.646855 | 7_3:+60231298 | None:intergenic |
| TCATTTGAGTATTAGCACCA+AGG | 0.650291 | 7_3:+60230859 | None:intergenic |
| GTGAGATGGTCGTGATGGTG+AGG | 0.655300 | 7_3:+60231488 | None:intergenic |
| ATGGGTCTAATCCAGAAGGT+GGG | 0.656727 | 7_3:+60233414 | None:intergenic |
| ATCTCCGCTGCAATATGTAG+CGG | 0.657846 | 7_3:+60231239 | None:intergenic |
| AGTATCAAGAGCAAGATCAA+CGG | 0.660445 | 7_3:+60233202 | None:intergenic |
| AGGGTTCTTAGAATGTCCAA+GGG | 0.662287 | 7_3:+60231140 | None:intergenic |
| TTCCTCAGAAACATGAACCT+AGG | 0.668829 | 7_3:-60233271 | Msa1113760:CDS |
| AACTCCGCTACATATTGCAG+CGG | 0.669845 | 7_3:-60231243 | Msa1113760:CDS |
| GGTGGTGAGGCATTAAGGAG+CGG | 0.674544 | 7_3:+60231516 | None:intergenic |
| AATGTGTATGCCAACAACCA+CGG | 0.675672 | 7_3:+60233234 | None:intergenic |
| AAAATAATTGAGAAAGTGGG+GGG | 0.680558 | 7_3:+60230148 | None:intergenic |
| GGAGAATGGGATAAGAGACA+AGG | 0.681472 | 7_3:-60230366 | Msa1113760:three_prime_UTR |
| TGATGATGATAATACTCACA+GGG | 0.685503 | 7_3:-60230814 | Msa1113760:CDS |
| TTCAACTCCGAAGTATCTGG+CGG | 0.687828 | 7_3:+60233172 | None:intergenic |
| TTGAAGACCAGAAAATCCGT+CGG | 0.689824 | 7_3:-60231451 | Msa1113760:CDS |
| ACCAGCCGGGAAGTTAACAT+CGG | 0.692763 | 7_3:+60231277 | None:intergenic |
| AGGCCTAATTGTGGTGACCG+TGG | 0.704495 | 7_3:-60233251 | Msa1113760:CDS |
| GAAACAACTAGCGAGCATGG+TGG | 0.736366 | 7_3:-60231729 | Msa1113760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATTATTAATTTTAATT+AGG | + | chr7_3:60233201-60233220 | None:intergenic | 0.0% |
| !!! | TTTATTTTTTTTTTTATTTT+TGG | - | chr7_3:60233470-60233489 | Msa1113760:CDS | 0.0% |
| !!! | TTTTATAGGAATTTTTTTAT+AGG | - | chr7_3:60232063-60232082 | Msa1113760:intron | 10.0% |
| !!! | TTTTTTTTATTTTTGGTTTT+AGG | - | chr7_3:60233477-60233496 | Msa1113760:CDS | 10.0% |
| !! | AAAACAATAATAAAGAGAAA+AGG | + | chr7_3:60230794-60230813 | None:intergenic | 15.0% |
| !!! | ACTCTAATTTTTTTATGAAA+TGG | - | chr7_3:60231024-60231043 | Msa1113760:CDS | 15.0% |
| !!! | CTCTAATTTTTTTATGAAAT+GGG | - | chr7_3:60231025-60231044 | Msa1113760:CDS | 15.0% |
| !! | TATGGAAAAAATAAAATCAA+AGG | + | chr7_3:60231421-60231440 | None:intergenic | 15.0% |
| !! | ATCACAAATAAACAAAAATA+TGG | + | chr7_3:60231439-60231458 | None:intergenic | 15.0% |
| !!! | GTTATTTCAATTACAATTAA+TGG | - | chr7_3:60233260-60233279 | Msa1113760:CDS | 15.0% |
| !!! | TTTTTATTTTTTGGAATGAA+AGG | - | chr7_3:60233589-60233608 | Msa1113760:CDS | 15.0% |
| !! | AGATGAATTGAAATAATAAA+AGG | + | chr7_3:60233731-60233750 | None:intergenic | 15.0% |
| !! | ATAAACACATTGAAAATTAG+TGG | + | chr7_3:60231929-60231948 | None:intergenic | 20.0% |
| !!! | TAATTTTCAATGTGTTTATG+TGG | - | chr7_3:60231930-60231949 | Msa1113760:intron | 20.0% |
| !!! | AACATTGATGCATTTTTTAT+AGG | - | chr7_3:60232049-60232068 | Msa1113760:intron | 20.0% |
| !!! | ACTGATTTTTTTTTCTGTTT+TGG | - | chr7_3:60233427-60233446 | Msa1113760:CDS | 20.0% |
| !! | ATAAAAGGAAGACAATAAAT+AGG | + | chr7_3:60233716-60233735 | None:intergenic | 20.0% |
| !! | TTGAAAATAATTGAGAAAGT+GGG | + | chr7_3:60233764-60233783 | None:intergenic | 20.0% |
| !! | ATTGAAAATAATTGAGAAAG+TGG | + | chr7_3:60233765-60233784 | None:intergenic | 20.0% |
| !! | TTTCCTAATCATATAAAAGA+TGG | + | chr7_3:60233803-60233822 | None:intergenic | 20.0% |
| !!! | ATCTTTTATATGATTAGGAA+AGG | - | chr7_3:60233802-60233821 | Msa1113760:five_prime_UTR | 20.0% |
| !!! | TTTTGAGGGATTCTTATATA+TGG | + | chr7_3:60230121-60230140 | None:intergenic | 25.0% |
| ! | TTCTCTACTACACTTATTAA+TGG | + | chr7_3:60230819-60230838 | None:intergenic | 25.0% |
| !!! | ATTTTTTTATGAAATGGGTG+AGG | - | chr7_3:60231030-60231049 | Msa1113760:CDS | 25.0% |
| ! | TCAACAATAGATAGATAACT+TGG | - | chr7_3:60231189-60231208 | Msa1113760:CDS | 25.0% |
| ! | GACAGTAGAATTAATTAATG+AGG | + | chr7_3:60231303-60231322 | None:intergenic | 25.0% |
| ! | TATGTGTTTATCTGTCTTTA+CGG | + | chr7_3:60231369-60231388 | None:intergenic | 25.0% |
| ! | AAAGGAATCAATTAATGTGA+CGG | + | chr7_3:60231403-60231422 | None:intergenic | 25.0% |
| ! | ATTTAGAAACTCATTCTAGT+GGG | + | chr7_3:60231548-60231567 | None:intergenic | 25.0% |
| ! | AATTTAGAAACTCATTCTAG+TGG | + | chr7_3:60231549-60231568 | None:intergenic | 25.0% |
| !!! | ATTTGGTCTTAAAGAAGAAA+AGG | - | chr7_3:60231655-60231674 | Msa1113760:CDS | 25.0% |
| !!! | TTTGGTCTTAAAGAAGAAAA+GGG | - | chr7_3:60231656-60231675 | Msa1113760:CDS | 25.0% |
| ! | AAAAACTACATTTCATGCAA+GGG | + | chr7_3:60231804-60231823 | None:intergenic | 25.0% |
| ! | AAAAAACTACATTTCATGCA+AGG | + | chr7_3:60231805-60231824 | None:intergenic | 25.0% |
| ! | GCTATAACAATCTAAACTAT+AGG | - | chr7_3:60231848-60231867 | Msa1113760:intron | 25.0% |
| ! | TTGTGTGTACATTAATACAA+CGG | - | chr7_3:60231887-60231906 | Msa1113760:intron | 25.0% |
| !! | TCTTAATCATGATTGTGTTT+TGG | + | chr7_3:60231956-60231975 | None:intergenic | 25.0% |
| !!! | CATATATAATAGCATTGATG+CGG | + | chr7_3:60231979-60231998 | None:intergenic | 25.0% |
| !! | CTATTTAAAACCTAATTGCT+TGG | - | chr7_3:60232007-60232026 | Msa1113760:intron | 25.0% |
| !!! | TTTTGGCTATGATATCAATA+GGG | + | chr7_3:60232336-60232355 | None:intergenic | 25.0% |
| !!! | ATTTTGGCTATGATATCAAT+AGG | + | chr7_3:60232337-60232356 | None:intergenic | 25.0% |
| !! | GAATAGAAAATCTGAAGTTA+GGG | + | chr7_3:60232788-60232807 | None:intergenic | 25.0% |
| !! | TGAATAGAAAATCTGAAGTT+AGG | + | chr7_3:60232789-60232808 | None:intergenic | 25.0% |
| !! | ACTTCAGATTTTCTATTCAA+AGG | - | chr7_3:60232790-60232809 | Msa1113760:intron | 25.0% |
| ! | TCTTCATTCATATTATGATG+AGG | + | chr7_3:60232973-60232992 | None:intergenic | 25.0% |
| !! | TTTTGTGAGATGATATATAG+TGG | - | chr7_3:60233381-60233400 | Msa1113760:CDS | 25.0% |
| ! | TGAAAATAATTGAGAAAGTG+GGG | + | chr7_3:60233763-60233782 | None:intergenic | 25.0% |
| !! | CTACCATCTTTTATATGATT+AGG | - | chr7_3:60233797-60233816 | Msa1113760:five_prime_UTR | 25.0% |
| !!! | CTGTGATTGTTGTTTTTTGA+GGG | + | chr7_3:60230135-60230154 | None:intergenic | 30.0% |
| !!! | ACTGTGATTGTTGTTTTTTG+AGG | + | chr7_3:60230136-60230155 | None:intergenic | 30.0% |
| GAAAGAAAGAAAGAAAGGAA+AGG | + | chr7_3:60230161-60230180 | None:intergenic | 30.0% | |
| TACTTAAACCTTCTCATCAA+CGG | - | chr7_3:60230358-60230377 | Msa1113760:three_prime_UTR | 30.0% | |
| TTCTTCAGAAAATTCTTCTG+TGG | - | chr7_3:60230463-60230482 | Msa1113760:intron | 30.0% | |
| TCTTCAGAAAATTCTTCTGT+GGG | - | chr7_3:60230464-60230483 | Msa1113760:intron | 30.0% | |
| TCTATCTATTGTTGATCGAT+GGG | + | chr7_3:60231184-60231203 | None:intergenic | 30.0% | |
| ATCTATCTATTGTTGATCGA+TGG | + | chr7_3:60231185-60231204 | None:intergenic | 30.0% | |
| CAATAGATAGATAACTTGGT+TGG | - | chr7_3:60231193-60231212 | Msa1113760:CDS | 30.0% | |
| GAAGACACAAGATCAAATAA+TGG | + | chr7_3:60231226-60231245 | None:intergenic | 30.0% | |
| ATTTCATGTTATGTGTGTAC+TGG | - | chr7_3:60231472-60231491 | Msa1113760:CDS | 30.0% | |
| TGAGGAAAGTGAATGTATTT+GGG | + | chr7_3:60231636-60231655 | None:intergenic | 30.0% | |
| ATGAGGAAAGTGAATGTATT+TGG | + | chr7_3:60231637-60231656 | None:intergenic | 30.0% | |
| ATACATTCACTTTCCTCATT+TGG | - | chr7_3:60231638-60231657 | Msa1113760:CDS | 30.0% | |
| !! | TTCTTCTTTAAGACCAAATG+AGG | + | chr7_3:60231654-60231673 | None:intergenic | 30.0% |
| GAAAGAGAGTTAGACATAAA+TGG | + | chr7_3:60231683-60231702 | None:intergenic | 30.0% | |
| TCTCTTTCATTTACCAAATC+AGG | - | chr7_3:60231695-60231714 | Msa1113760:CDS | 30.0% | |
| TTTCATTACATCTTCAATCG+AGG | + | chr7_3:60232209-60232228 | None:intergenic | 30.0% | |
| ACATTGAACCAAACAAACTA+AGG | - | chr7_3:60232833-60232852 | Msa1113760:intron | 30.0% | |
| !! | AAACACAACCTTAGTTTGTT+TGG | + | chr7_3:60232844-60232863 | None:intergenic | 30.0% |
| AAACAAACTAAGGTTGTGTT+TGG | - | chr7_3:60232843-60232862 | Msa1113760:intron | 30.0% | |
| ! | AATCCATGTTATTGTTGTTG+TGG | + | chr7_3:60233008-60233027 | None:intergenic | 30.0% |
| ACAACAATAACATGGATTCA+AGG | - | chr7_3:60233010-60233029 | Msa1113760:intron | 30.0% | |
| ! | TGATGATGATAATACTCACA+GGG | - | chr7_3:60233092-60233111 | Msa1113760:intron | 30.0% |
| ! | TTACAATTAATGGACCATGA+TGG | - | chr7_3:60233270-60233289 | Msa1113760:CDS | 30.0% |
| ! | CATGATGGAAAATTTAACGA+GGG | - | chr7_3:60233285-60233304 | Msa1113760:CDS | 30.0% |
| ! | ATGATGGAAAATTTAACGAG+GGG | - | chr7_3:60233286-60233305 | Msa1113760:CDS | 30.0% |
| AATGGTGACTAGTATTTGAT+AGG | + | chr7_3:60233503-60233522 | None:intergenic | 30.0% | |
| AAAATAATTGAGAAAGTGGG+GGG | + | chr7_3:60233761-60233780 | None:intergenic | 30.0% | |
| GAAAATAATTGAGAAAGTGG+GGG | + | chr7_3:60233762-60233781 | None:intergenic | 30.0% | |
| AGGGATTCTTATATATGGAG+GGG | + | chr7_3:60230116-60230135 | None:intergenic | 35.0% | |
| GAGGGATTCTTATATATGGA+GGG | + | chr7_3:60230117-60230136 | None:intergenic | 35.0% | |
| TGAGGGATTCTTATATATGG+AGG | + | chr7_3:60230118-60230137 | None:intergenic | 35.0% | |
| TGGTGGAAAGAAAGAAAGAA+AGG | + | chr7_3:60230166-60230185 | None:intergenic | 35.0% | |
| ! | GATGATGATGATGATGATGA+TGG | + | chr7_3:60230186-60230205 | None:intergenic | 35.0% |
| !! | GTTTAGGGTTATGGTTTTTC+TGG | + | chr7_3:60230295-60230314 | None:intergenic | 35.0% |
| ! | GACATGATTGTTTAGGGTTA+TGG | + | chr7_3:60230304-60230323 | None:intergenic | 35.0% |
| TCAAGGGACATGATTGTTTA+GGG | + | chr7_3:60230310-60230329 | None:intergenic | 35.0% | |
| TTCAAGGGACATGATTGTTT+AGG | + | chr7_3:60230311-60230330 | None:intergenic | 35.0% | |
| AGATCTTAGTGAGTCTTCAA+GGG | + | chr7_3:60230326-60230345 | None:intergenic | 35.0% | |
| GTTATACCAGTTAACTCAGT+TGG | - | chr7_3:60230556-60230575 | Msa1113760:intron | 35.0% | |
| AGTATCAAGAGCAAGATCAA+CGG | + | chr7_3:60230707-60230726 | None:intergenic | 35.0% | |
| !!! | TGACCAGTCGTATGTTTTTT+GGG | - | chr7_3:60230913-60230932 | Msa1113760:CDS | 35.0% |
| !!! | TCGTATGTTTTTTGGGTCTT+GGG | - | chr7_3:60230920-60230939 | Msa1113760:CDS | 35.0% |
| !!! | TTTCCACAGTTACTGGTTTT+TGG | - | chr7_3:60230945-60230964 | Msa1113760:CDS | 35.0% |
| !!! | TTCCACAGTTACTGGTTTTT+GGG | - | chr7_3:60230946-60230965 | Msa1113760:CDS | 35.0% |
| ! | GAGGAATGAGAATGAGATTT+TGG | - | chr7_3:60231049-60231068 | Msa1113760:CDS | 35.0% |
| !! | TGAGAATGAGATTTTGGTCT+AGG | - | chr7_3:60231055-60231074 | Msa1113760:CDS | 35.0% |
| ATGTGTGTACTGGAAATTAG+AGG | - | chr7_3:60231482-60231501 | Msa1113760:CDS | 35.0% | |
| ! | ACATGACAGTTTTCTCGATT+TGG | - | chr7_3:60231512-60231531 | Msa1113760:CDS | 35.0% |
| GTGGTTATGTTATCCTGATT+TGG | + | chr7_3:60231711-60231730 | None:intergenic | 35.0% | |
| CGATTTCATTCCAAGCAATT+AGG | + | chr7_3:60232020-60232039 | None:intergenic | 35.0% | |
| !!! | TGTCTTGTTTTCTTGATGCT+AGG | + | chr7_3:60232237-60232256 | None:intergenic | 35.0% |
| ! | ATGTTTTGCAAGTACTTCTG+GGG | + | chr7_3:60232311-60232330 | None:intergenic | 35.0% |
| ! | GATGTTTTGCAAGTACTTCT+GGG | + | chr7_3:60232312-60232331 | None:intergenic | 35.0% |
| ! | AGATGTTTTGCAAGTACTTC+TGG | + | chr7_3:60232313-60232332 | None:intergenic | 35.0% |
| !! | GATTTTCTGGTCTTCAAGAT+CGG | + | chr7_3:60232452-60232471 | None:intergenic | 35.0% |
| CTAGTGAAACTCATGGTAAT+GGG | - | chr7_3:60232511-60232530 | Msa1113760:intron | 35.0% | |
| CTAATGCTTCATCAAGGTTT+AGG | + | chr7_3:60232543-60232562 | None:intergenic | 35.0% | |
| GTAATGCTAATGCTTCATCA+AGG | + | chr7_3:60232549-60232568 | None:intergenic | 35.0% | |
| TTCTCTACTGCAATTCTCAA+CGG | + | chr7_3:60232578-60232597 | None:intergenic | 35.0% | |
| GTTCAATGTGAGTTAATCCA+GGG | + | chr7_3:60232822-60232841 | None:intergenic | 35.0% | |
| ! | TGTTATTGTTGTTGTGGCTA+TGG | + | chr7_3:60233002-60233021 | None:intergenic | 35.0% |
| TAGCCACAACAACAATAACA+TGG | - | chr7_3:60233002-60233021 | Msa1113760:intron | 35.0% | |
| CAATAACATGGATTCAAGGT+TGG | - | chr7_3:60233014-60233033 | Msa1113760:intron | 35.0% | |
| TCATTTGAGTATTAGCACCA+AGG | + | chr7_3:60233050-60233069 | None:intergenic | 35.0% | |
| TCAAATGAGTACTTCCAGAA+TGG | - | chr7_3:60233062-60233081 | Msa1113760:intron | 35.0% | |
| ! | GTGATGATGATAATACTCAC+AGG | - | chr7_3:60233091-60233110 | Msa1113760:intron | 35.0% |
| ! | ATGAGAGTGATGATGATACA+TGG | + | chr7_3:60233133-60233152 | None:intergenic | 35.0% |
| ATGTATCATCATCACTCTCA+TGG | - | chr7_3:60233132-60233151 | Msa1113760:intron | 35.0% | |
| GTAACTACTCTTACATGCAA+AGG | + | chr7_3:60233179-60233198 | None:intergenic | 35.0% | |
| ! | CCTCGTTAAATTTTCCATCA+TGG | + | chr7_3:60233287-60233306 | None:intergenic | 35.0% |
| ! | CCATGATGGAAAATTTAACG+AGG | - | chr7_3:60233284-60233303 | Msa1113760:CDS | 35.0% |
| !!! | TTTTGGAATGAAAGGATGCA+TGG | - | chr7_3:60233597-60233616 | Msa1113760:exon | 35.0% |
| !! | GATGATGATGATGATGATGG+TGG | + | chr7_3:60230183-60230202 | None:intergenic | 40.0% |
| GATTGAAAGAGAGAGAGGTT+TGG | + | chr7_3:60230273-60230292 | None:intergenic | 40.0% | |
| TTCTGGATTGAAAGAGAGAG+AGG | + | chr7_3:60230278-60230297 | None:intergenic | 40.0% | |
| GAGATCTTAGTGAGTCTTCA+AGG | + | chr7_3:60230327-60230346 | None:intergenic | 40.0% | |
| TCGTAACCAACTGAGTTAAC+TGG | + | chr7_3:60230565-60230584 | None:intergenic | 40.0% | |
| AGTTAACTCAGTTGGTTACG+AGG | - | chr7_3:60230564-60230583 | Msa1113760:intron | 40.0% | |
| ATGCTTCAGTTTCTGTACAG+TGG | - | chr7_3:60230598-60230617 | Msa1113760:intron | 40.0% | |
| TTCCTCAGAAACATGAACCT+AGG | - | chr7_3:60230635-60230654 | Msa1113760:intron | 40.0% | |
| AATGTGTATGCCAACAACCA+CGG | + | chr7_3:60230675-60230694 | None:intergenic | 40.0% | |
| !!! | GTGACCAGTCGTATGTTTTT+TGG | - | chr7_3:60230912-60230931 | Msa1113760:CDS | 40.0% |
| AGACCCAAAAAACATACGAC+TGG | + | chr7_3:60230919-60230938 | None:intergenic | 40.0% | |
| !!! | GTCGTATGTTTTTTGGGTCT+TGG | - | chr7_3:60230919-60230938 | Msa1113760:CDS | 40.0% |
| TTGGGAATTTCCACAGTTAC+TGG | - | chr7_3:60230938-60230957 | Msa1113760:CDS | 40.0% | |
| TTCCCAAAAACCAGTAACTG+TGG | + | chr7_3:60230951-60230970 | None:intergenic | 40.0% | |
| !!! | AGTTACTGGTTTTTGGGAAC+TGG | - | chr7_3:60230952-60230971 | Msa1113760:CDS | 40.0% |
| !!! | GTTACTGGTTTTTGGGAACT+GGG | - | chr7_3:60230953-60230972 | Msa1113760:CDS | 40.0% |
| TCAAGCAACAAACTGTGAAG+AGG | + | chr7_3:60231339-60231358 | None:intergenic | 40.0% | |
| AGCAAAGAGAAGAAAGTGAG+TGG | + | chr7_3:60231730-60231749 | None:intergenic | 40.0% | |
| ! | AGGGAAAAGAGTTTGGGATT+TGG | + | chr7_3:60231785-60231804 | None:intergenic | 40.0% |
| CATGCAAGGGAAAAGAGTTT+GGG | + | chr7_3:60231791-60231810 | None:intergenic | 40.0% | |
| TCATGCAAGGGAAAAGAGTT+TGG | + | chr7_3:60231792-60231811 | None:intergenic | 40.0% | |
| CATTAATACAACGGCGATTG+AGG | - | chr7_3:60231896-60231915 | Msa1113760:intron | 40.0% | |
| AACAAGACATGCACCAACTA+TGG | - | chr7_3:60232248-60232267 | Msa1113760:intron | 40.0% | |
| ! | ACCTGATTTTGCTACAAGGT+GGG | + | chr7_3:60232284-60232303 | None:intergenic | 40.0% |
| ! | GAAGACCTGATTTTGCTACA+AGG | + | chr7_3:60232288-60232307 | None:intergenic | 40.0% |
| ! | TGTTTTGCAAGTACTTCTGG+GGG | + | chr7_3:60232310-60232329 | None:intergenic | 40.0% |
| TTGAAGACCAGAAAATCCGT+CGG | - | chr7_3:60232455-60232474 | Msa1113760:intron | 40.0% | |
| GCTAGTGAAACTCATGGTAA+TGG | - | chr7_3:60232510-60232529 | Msa1113760:intron | 40.0% | |
| !! | AAACTCATGGTAATGGGAGA+AGG | - | chr7_3:60232517-60232536 | Msa1113760:intron | 40.0% |
| ! | AGAAGTTGTGAAAGCCTTGT+TGG | - | chr7_3:60232594-60232613 | Msa1113760:intron | 40.0% |
| CATCAACTGTTCTCACATTC+GGG | + | chr7_3:60232738-60232757 | None:intergenic | 40.0% | |
| CCATCAACTGTTCTCACATT+CGG | + | chr7_3:60232739-60232758 | None:intergenic | 40.0% | |
| AGGGTTCTTAGAATGTCCAA+GGG | + | chr7_3:60232769-60232788 | None:intergenic | 40.0% | |
| TAGGGTTCTTAGAATGTCCA+AGG | + | chr7_3:60232770-60232789 | None:intergenic | 40.0% | |
| GGTTCAATGTGAGTTAATCC+AGG | + | chr7_3:60232823-60232842 | None:intergenic | 40.0% | |
| ! | TGCAGCTCTTGTTATGTCAA+GGG | - | chr7_3:60232879-60232898 | Msa1113760:intron | 40.0% |
| ! | CTTGTTATGTCAAGGGAAGA+AGG | - | chr7_3:60232886-60232905 | Msa1113760:intron | 40.0% |
| ! | TATTGTTGTTGTGGCTATGG+TGG | + | chr7_3:60232999-60233018 | None:intergenic | 40.0% |
| !! | AGGTTGGTGTATCTTAACCT+TGG | - | chr7_3:60233030-60233049 | Msa1113760:intron | 40.0% |
| ! | AGTACTTCCAGAATGGATTC+TGG | - | chr7_3:60233069-60233088 | Msa1113760:intron | 40.0% |
| ATCATCACCAGAATCCATTC+TGG | + | chr7_3:60233079-60233098 | None:intergenic | 40.0% | |
| TGGAAAATTTAACGAGGGGA+AGG | - | chr7_3:60233290-60233309 | Msa1113760:CDS | 40.0% | |
| ! | TTGGCTCTCTGATGTTTAGT+TGG | - | chr7_3:60233446-60233465 | Msa1113760:CDS | 40.0% |
| TGGCTCTCTGATGTTTAGTT+GGG | - | chr7_3:60233447-60233466 | Msa1113760:CDS | 40.0% | |
| ! | ACTAGTCACCATTTGAAGTG+CGG | - | chr7_3:60233510-60233529 | Msa1113760:CDS | 40.0% |
| CTATGAAACCGCACTTCAAA+TGG | + | chr7_3:60233521-60233540 | None:intergenic | 40.0% | |
| ! | CATTTGAAGTGCGGTTTCAT+AGG | - | chr7_3:60233519-60233538 | Msa1113760:CDS | 40.0% |
| CTGATGTGAAGCTAATACCA+CGG | - | chr7_3:60233690-60233709 | Msa1113760:five_prime_UTR | 40.0% | |
| ! | TATGGAGGGGTATACCTGTT+GGG | + | chr7_3:60230103-60230122 | None:intergenic | 45.0% |
| ! | ATATGGAGGGGTATACCTGT+TGG | + | chr7_3:60230104-60230123 | None:intergenic | 45.0% |
| ATGGGTCTAATCCAGAAGGT+GGG | + | chr7_3:60230495-60230514 | None:intergenic | 45.0% | |
| CATGAACCTAGGCCTAATTG+TGG | - | chr7_3:60230646-60230665 | Msa1113760:intron | 45.0% | |
| ! | TTCAACTCCGAAGTATCTGG+CGG | + | chr7_3:60230737-60230756 | None:intergenic | 45.0% |
| ! | CTGTTCAACTCCGAAGTATC+TGG | + | chr7_3:60230740-60230759 | None:intergenic | 45.0% |
| !! | TGGTTTTTGGGAACTGGGAA+GGG | - | chr7_3:60230958-60230977 | Msa1113760:CDS | 45.0% |
| ACAGAAACAACTAGCGAGCA+TGG | - | chr7_3:60232174-60232193 | Msa1113760:intron | 45.0% | |
| TCCCACCTTGTAGCAAAATC+AGG | - | chr7_3:60232280-60232299 | Msa1113760:intron | 45.0% | |
| ! | GACCTGATTTTGCTACAAGG+TGG | + | chr7_3:60232285-60232304 | None:intergenic | 45.0% |
| ! | GATGCGAAGCTCTTCGATTT+TGG | + | chr7_3:60232353-60232372 | None:intergenic | 45.0% |
| !! | ATGATGGTGGTGAGGCATTA+AGG | + | chr7_3:60232398-60232417 | None:intergenic | 45.0% |
| CTGCAATTCTCAACGGCATA+AGG | + | chr7_3:60232571-60232590 | None:intergenic | 45.0% | |
| !! | GTGAAAGCCTTGTTGGAACT+CGG | - | chr7_3:60232601-60232620 | Msa1113760:intron | 45.0% |
| !! | TGTAGCGGAGTTTTACCAGT+TGG | + | chr7_3:60232655-60232674 | None:intergenic | 45.0% |
| AACTCCGCTACATATTGCAG+CGG | - | chr7_3:60232663-60232682 | Msa1113760:intron | 45.0% | |
| ATCTCCGCTGCAATATGTAG+CGG | + | chr7_3:60232670-60232689 | None:intergenic | 45.0% | |
| AGCAATACAGCCACCATATC+CGG | + | chr7_3:60232700-60232719 | None:intergenic | 45.0% | |
| CCGAATGTGAGAACAGTTGA+TGG | - | chr7_3:60232736-60232755 | Msa1113760:intron | 45.0% | |
| !! | AGTTGATGGTGTTACACCCT+TGG | - | chr7_3:60232750-60232769 | Msa1113760:intron | 45.0% |
| ! | CTGCAGCTCTTGTTATGTCA+AGG | - | chr7_3:60232878-60232897 | Msa1113760:intron | 45.0% |
| !! | GGGAAGGTTTTGTCCATGAA+AGG | - | chr7_3:60233306-60233325 | Msa1113760:CDS | 45.0% |
| ! | CCATGATGAAGCACCTTTCA+TGG | + | chr7_3:60233322-60233341 | None:intergenic | 45.0% |
| !! | CCATGAAAGGTGCTTCATCA+TGG | - | chr7_3:60233319-60233338 | Msa1113760:CDS | 45.0% |
| !! | TGAAAGGTGCTTCATCATGG+TGG | - | chr7_3:60233322-60233341 | Msa1113760:CDS | 45.0% |
| AGTGCGGTTTCATAGGAGAA+TGG | - | chr7_3:60233526-60233545 | Msa1113760:CDS | 45.0% | |
| GTGCGGTTTCATAGGAGAAT+GGG | - | chr7_3:60233527-60233546 | Msa1113760:CDS | 45.0% | |
| GGAGAATGGGATAAGAGACA+AGG | - | chr7_3:60233540-60233559 | Msa1113760:CDS | 45.0% | |
| TGGAATGAAAGGATGCATGG+AGG | - | chr7_3:60233600-60233619 | Msa1113760:exon | 45.0% | |
| GGAAGACAATAAATAGGCCG+TGG | + | chr7_3:60233710-60233729 | None:intergenic | 45.0% | |
| TAATTGAGAAAGTGGGGGGT+GGG | + | chr7_3:60233757-60233776 | None:intergenic | 45.0% | |
| ATAATTGAGAAAGTGGGGGG+TGG | + | chr7_3:60233758-60233777 | None:intergenic | 45.0% | |
| !!! | TATTAATTTTTTAATGAAAT+AGG | - | chr7_3:60231086-60231105 | Msa1113760:CDS | 5.0% |
| !!! | TCAATTTTATTTTTATTTTT+TGG | - | chr7_3:60233580-60233599 | Msa1113760:CDS | 5.0% |
| ! | AGGGGTATACCTGTTGGGAT+GGG | + | chr7_3:60230098-60230117 | None:intergenic | 50.0% |
| ! | ACGCTTGTCCGTTGATGAGA+AGG | + | chr7_3:60230369-60230388 | None:intergenic | 50.0% |
| !! | GACGTTGTTTTCAGCGTCGA+AGG | - | chr7_3:60230394-60230413 | Msa1113760:three_prime_UTR | 50.0% |
| CTAAGATGCATCTGTGTGCG+TGG | + | chr7_3:60230429-60230448 | None:intergenic | 50.0% | |
| TCTAATCCAGAAGGTGGGTC+TGG | + | chr7_3:60230490-60230509 | None:intergenic | 50.0% | |
| GATGGGTCTAATCCAGAAGG+TGG | + | chr7_3:60230496-60230515 | None:intergenic | 50.0% | |
| ! | CCTGATGGGTCTAATCCAGA+AGG | + | chr7_3:60230499-60230518 | None:intergenic | 50.0% |
| ! | CCTTCTGGATTAGACCCATC+AGG | - | chr7_3:60230496-60230515 | Msa1113760:intron | 50.0% |
| !! | GGTTGACTCGGTTTCCTGAT+GGG | + | chr7_3:60230513-60230532 | None:intergenic | 50.0% |
| AACACCAGACCTAGCTGAAC+CGG | + | chr7_3:60230539-60230558 | None:intergenic | 50.0% | |
| ! | GGCCTAGGTTCATGTTTCTG+AGG | + | chr7_3:60230640-60230659 | None:intergenic | 50.0% |
| CAACCACGGTCACCACAATT+AGG | + | chr7_3:60230661-60230680 | None:intergenic | 50.0% | |
| ATTGTGGTGACCGTGGTTGT+TGG | - | chr7_3:60230662-60230681 | Msa1113760:intron | 50.0% | |
| AAGAGCAAGATCAACGGCTG+AGG | + | chr7_3:60230701-60230720 | None:intergenic | 50.0% | |
| ACAGCTTGCATTGCTCACTC+AGG | - | chr7_3:60230756-60230775 | Msa1113760:exon | 50.0% | |
| !! | CTGGTTTTTGGGAACTGGGA+AGG | - | chr7_3:60230957-60230976 | Msa1113760:CDS | 50.0% |
| GAAACAACTAGCGAGCATGG+TGG | - | chr7_3:60232177-60232196 | Msa1113760:intron | 50.0% | |
| GGGAACATGTGGTCCATAGT+TGG | + | chr7_3:60232264-60232283 | None:intergenic | 50.0% | |
| TGCTACAAGGTGGGAACATG+TGG | + | chr7_3:60232275-60232294 | None:intergenic | 50.0% | |
| CATTAAGGAGCGGCGTGATA+AGG | + | chr7_3:60232383-60232402 | None:intergenic | 50.0% | |
| !! | GTCTCATCCGACGGATTTTC+TGG | + | chr7_3:60232465-60232484 | None:intergenic | 50.0% |
| TTTCACTAGCTCGACGTCTG+AGG | + | chr7_3:60232500-60232519 | None:intergenic | 50.0% | |
| CGTCGAGCTAGTGAAACTCA+TGG | - | chr7_3:60232504-60232523 | Msa1113760:intron | 50.0% | |
| TGCAGCCGATGTTAACTTCC+CGG | - | chr7_3:60232624-60232643 | Msa1113760:intron | 50.0% | |
| ACCAGCCGGGAAGTTAACAT+CGG | + | chr7_3:60232632-60232651 | None:intergenic | 50.0% | |
| ! | TTTTACCAGTTGGACCAGCC+GGG | + | chr7_3:60232645-60232664 | None:intergenic | 50.0% |
| ! | GTTTTACCAGTTGGACCAGC+CGG | + | chr7_3:60232646-60232665 | None:intergenic | 50.0% |
| GCTACATATTGCAGCGGAGA+TGG | - | chr7_3:60232669-60232688 | Msa1113760:intron | 50.0% | |
| !! | CTATTCAAAGGTGCTGTCCC+TGG | - | chr7_3:60232802-60232821 | Msa1113760:intron | 50.0% |
| GGATGCATGGAGGAGACTTT+AGG | - | chr7_3:60233610-60233629 | Msa1113760:five_prime_UTR | 50.0% | |
| ! | GAGGGGTATACCTGTTGGGA+TGG | + | chr7_3:60230099-60230118 | None:intergenic | 55.0% |
| !! | GGGTTGACTCGGTTTCCTGA+TGG | + | chr7_3:60230514-60230533 | None:intergenic | 55.0% |
| GGAAACCGAGTCAACCCATC+CGG | - | chr7_3:60230517-60230536 | Msa1113760:intron | 55.0% | |
| !! | CTGAACCGGATGGGTTGACT+CGG | + | chr7_3:60230525-60230544 | None:intergenic | 55.0% |
| TCAACCCATCCGGTTCAGCT+AGG | - | chr7_3:60230527-60230546 | Msa1113760:intron | 55.0% | |
| CAGACCTAGCTGAACCGGAT+GGG | + | chr7_3:60230534-60230553 | None:intergenic | 55.0% | |
| CGGTCACCACAATTAGGCCT+AGG | + | chr7_3:60230655-60230674 | None:intergenic | 55.0% | |
| AGGCCTAATTGTGGTGACCG+TGG | - | chr7_3:60230655-60230674 | Msa1113760:intron | 55.0% | |
| CTTGCAGCCGCCAGATACTT+CGG | - | chr7_3:60230727-60230746 | Msa1113760:intron | 55.0% | |
| CGTGCACTAGCTGACTGTGT+TGG | + | chr7_3:60231601-60231620 | None:intergenic | 55.0% | |
| TAAGGAGCGGCGTGATAAGG+AGG | + | chr7_3:60232380-60232399 | None:intergenic | 55.0% | |
| ! | GGTGGTGAGGCATTAAGGAG+CGG | + | chr7_3:60232393-60232412 | None:intergenic | 55.0% |
| !! | TGGTGAGGATGATGGTGGTG+AGG | + | chr7_3:60232406-60232425 | None:intergenic | 55.0% |
| ! | CGTGATGGTGAGGATGATGG+TGG | + | chr7_3:60232411-60232430 | None:intergenic | 55.0% |
| ! | GGTCGTGATGGTGAGGATGA+TGG | + | chr7_3:60232414-60232433 | None:intergenic | 55.0% |
| ! | GTGAGATGGTCGTGATGGTG+AGG | + | chr7_3:60232421-60232440 | None:intergenic | 55.0% |
| GTCTTCAAGATCGGCTGCAG+CGG | + | chr7_3:60232443-60232462 | None:intergenic | 55.0% | |
| GGAGATGGTCTCACCGGATA+TGG | - | chr7_3:60232684-60232703 | Msa1113760:intron | 55.0% | |
| GATGGTCTCACCGGATATGG+TGG | - | chr7_3:60232687-60232706 | Msa1113760:intron | 55.0% | |
| TCACATTCGGGTCAGCGTGA+TGG | + | chr7_3:60232726-60232745 | None:intergenic | 55.0% | |
| CCAGACCTAGCTGAACCGGA+TGG | + | chr7_3:60230535-60230554 | None:intergenic | 60.0% | |
| CCATCCGGTTCAGCTAGGTC+TGG | - | chr7_3:60230532-60230551 | Msa1113760:intron | 60.0% | |
| CAGCGGTGAGATGGTCGTGA+TGG | + | chr7_3:60232426-60232445 | None:intergenic | 60.0% | |
| CTCGACGTCTGAGGAGTCGA+GGG | + | chr7_3:60232491-60232510 | None:intergenic | 60.0% | |
| GGCTGCACCGAGTTCCAACA+AGG | + | chr7_3:60232611-60232630 | None:intergenic | 60.0% | |
| GCCGATGTTAACTTCCCGGC+TGG | - | chr7_3:60232628-60232647 | Msa1113760:intron | 60.0% | |
| ! | AACTTCCCGGCTGGTCCAAC+TGG | - | chr7_3:60232637-60232656 | Msa1113760:intron | 60.0% |
| TGCAGCGGAGATGGTCTCAC+CGG | - | chr7_3:60232678-60232697 | Msa1113760:intron | 60.0% | |
| TGTGGGCCAGACCCACCTTC+TGG | - | chr7_3:60230481-60230500 | Msa1113760:intron | 65.0% | |
| GATCGGCTGCAGCGGTGAGA+TGG | + | chr7_3:60232435-60232454 | None:intergenic | 65.0% | |
| CGAGGGCTCGTCTCATCCGA+CGG | + | chr7_3:60232474-60232493 | None:intergenic | 65.0% | |
| GCTCGACGTCTGAGGAGTCG+AGG | + | chr7_3:60232492-60232511 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 60230094 | 60233834 | 60230094 | ID=Msa1113760;Name=Msa1113760 |
| chr7_3 | mRNA | 60230094 | 60233834 | 60230094 | ID=Msa1113760-mRNA-1;Parent=Msa1113760;Name=Msa1113760-mRNA-1;_AED=0.06;_eAED=0.06;_QI=225|1|1|1|0.5|0.33|3|353|482 |
| chr7_3 | exon | 60230094 | 60230429 | 60230094 | ID=Msa1113760-mRNA-1:exon:13497;Parent=Msa1113760-mRNA-1 |
| chr7_3 | exon | 60230744 | 60231750 | 60230744 | ID=Msa1113760-mRNA-1:exon:13496;Parent=Msa1113760-mRNA-1 |
| chr7_3 | exon | 60233151 | 60233834 | 60233151 | ID=Msa1113760-mRNA-1:exon:13495;Parent=Msa1113760-mRNA-1 |
| chr7_3 | five_prime_UTR | 60233610 | 60233834 | 60233610 | ID=Msa1113760-mRNA-1:five_prime_utr;Parent=Msa1113760-mRNA-1 |
| chr7_3 | CDS | 60233151 | 60233609 | 60233151 | ID=Msa1113760-mRNA-1:cds;Parent=Msa1113760-mRNA-1 |
| chr7_3 | CDS | 60230761 | 60231750 | 60230761 | ID=Msa1113760-mRNA-1:cds;Parent=Msa1113760-mRNA-1 |
| chr7_3 | three_prime_UTR | 60230744 | 60230760 | 60230744 | ID=Msa1113760-mRNA-1:three_prime_utr;Parent=Msa1113760-mRNA-1 |
| chr7_3 | three_prime_UTR | 60230094 | 60230429 | 60230094 | ID=Msa1113760-mRNA-1:three_prime_utr;Parent=Msa1113760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
