Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114160 | XP_003625059.1 | 97.694 | 477 | 4 | 1 | 1 | 470 | 1 | 477 | 0.0 | 971 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114160 | sp|Q84KI6|SQD1_SPIOL | 74.534 | 483 | 109 | 3 | 1 | 470 | 1 | 482 | 0.0 | 747 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114160 | G7KRQ8 | 97.694 | 477 | 4 | 1 | 1 | 470 | 1 | 477 | 0.0 | 971 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1114160 | Msa1160110 | 0.838514 | 2.749244e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114160 | MtrunA17_Chr7g0256731 | 97.694 | 477 | 4 | 1 | 1 | 470 | 1 | 477 | 0.0 | 971 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114160 | AT4G33030.1 | 75.676 | 481 | 102 | 5 | 1 | 470 | 1 | 477 | 0.0 | 728 |
Find 116 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGACTATGATGCAATATT+TGG | 0.140392 | 7_3:-60872382 | Msa1114160:CDS |
| CTGATGCTGTTGTCCATTTC+GGG | 0.173565 | 7_3:-60872798 | Msa1114160:CDS |
| ATTACTCGCTTCGGTTTAAA+AGG | 0.187741 | 7_3:+60873078 | None:intergenic |
| CCTTCCTCAATATCAATATT+TGG | 0.201469 | 7_3:+60872616 | None:intergenic |
| CCTGATGCTGTTGTCCATTT+CGG | 0.263402 | 7_3:-60872799 | Msa1114160:CDS |
| CTGAATCAAGGAGTGGTATA+TGG | 0.263921 | 7_3:-60872451 | Msa1114160:CDS |
| CGCAAGAAAAGCCGTCTAAA+TGG | 0.294684 | 7_3:+60873192 | None:intergenic |
| TAGTTTGAACCGGGGTTTCC+TGG | 0.295863 | 7_3:+60873112 | None:intergenic |
| AGCTTTCACTTGCAAAGCTT+GGG | 0.304992 | 7_3:-60872491 | Msa1114160:CDS |
| AAATTATGCCTGGTGTTTCT+TGG | 0.333741 | 7_3:-60871897 | Msa1114160:CDS |
| TGCAAGTGAAAGCTATGTTA+TGG | 0.335168 | 7_3:+60872500 | None:intergenic |
| GAGCTAGCTTGCTTTGGATA+TGG | 0.338990 | 7_3:+60872553 | None:intergenic |
| GTGTTTCTTGGAGAAAGGTT+GGG | 0.344780 | 7_3:-60871885 | Msa1114160:CDS |
| AAGCCGTCTAAATGGAGTTT+TGG | 0.349474 | 7_3:+60873200 | None:intergenic |
| TGCATGAAGAGTTGTGTAAC+AGG | 0.360759 | 7_3:-60872405 | Msa1114160:CDS |
| TGATTCACTGCTTAACTTTG+CGG | 0.361307 | 7_3:-60871950 | Msa1114160:CDS |
| CTCATAGGACTTGAAGGTTT+CGG | 0.374096 | 7_3:+60872822 | None:intergenic |
| ACCCCGGTTCAAACTAGTTC+TGG | 0.375200 | 7_3:-60873105 | Msa1114160:CDS |
| TCCAACATTGAATGCGATCC+TGG | 0.384788 | 7_3:+60872908 | None:intergenic |
| CGATCCTGGATGGAGGAAAT+TGG | 0.387488 | 7_3:+60872922 | None:intergenic |
| GCAAGTGAAAGCTATGTTAT+GGG | 0.394552 | 7_3:+60872501 | None:intergenic |
| AACACTAAACTAGTTGATCT+TGG | 0.398824 | 7_3:-60872006 | Msa1114160:CDS |
| TAAAATGAGCTAGCTTGCTT+TGG | 0.399923 | 7_3:+60872547 | None:intergenic |
| TCTTGGATTAGGCACAGATA+TGG | 0.408241 | 7_3:+60872062 | None:intergenic |
| GGTGTTTCTTGGAGAAAGGT+TGG | 0.408948 | 7_3:-60871886 | Msa1114160:CDS |
| TAGCTTTCACTTGCAAAGCT+TGG | 0.414968 | 7_3:-60872492 | Msa1114160:CDS |
| CAGATCGCTGTTCCCCGAAA+TGG | 0.418112 | 7_3:+60872785 | None:intergenic |
| ATTGAATCGGTTCTGTGTTC+AGG | 0.420146 | 7_3:-60872353 | Msa1114160:CDS |
| TAATCCAAGAGTGGAGTTAG+AGG | 0.427522 | 7_3:-60872049 | Msa1114160:CDS |
| CCGAAATGGACAACAGCATC+AGG | 0.432925 | 7_3:+60872799 | None:intergenic |
| TTGAAGACTCTGAACTCTCC+AGG | 0.434551 | 7_3:+60872168 | None:intergenic |
| TGCTCCTCTAACTCCACTCT+TGG | 0.440560 | 7_3:+60872045 | None:intergenic |
| TACGAAAGCTGGCGAGAAGT+TGG | 0.440566 | 7_3:-60872100 | Msa1114160:CDS |
| ATCAGGCTCATAGGACTTGA+AGG | 0.444397 | 7_3:+60872816 | None:intergenic |
| AATGCTTCTACAATTTCAAC+TGG | 0.445402 | 7_3:-60873135 | Msa1114160:CDS |
| TGAATCAAGGAGTGGTATAT+GGG | 0.446459 | 7_3:-60872450 | Msa1114160:CDS |
| CTGAACTCTCCAGGGTTAGC+CGG | 0.447834 | 7_3:+60872177 | None:intergenic |
| CTAGTCAAGCTTGGGACAAT+GGG | 0.448728 | 7_3:-60872652 | Msa1114160:CDS |
| TTCTGTGTTCAGGCTGCTGT+TGG | 0.451203 | 7_3:-60872343 | Msa1114160:CDS |
| CCTCGTAACCTTTGTTAGAA+AGG | 0.451936 | 7_3:+60873010 | None:intergenic |
| CCAATGACCATTACTCGCTT+CGG | 0.452722 | 7_3:+60873069 | None:intergenic |
| GATGTTGAGCATTGGTGAAA+AGG | 0.453224 | 7_3:+60873252 | None:intergenic |
| TGTTTCTTGGAGAAAGGTTG+GGG | 0.454574 | 7_3:-60871884 | Msa1114160:CDS |
| GCCTGGTGTTTCTTGGAGAA+AGG | 0.462195 | 7_3:-60871890 | Msa1114160:CDS |
| CAATGTTGGAAATCTCTCAC+TGG | 0.464132 | 7_3:-60872895 | Msa1114160:CDS |
| ACGAAAGCTGGCGAGAAGTT+GGG | 0.464218 | 7_3:-60872099 | Msa1114160:CDS |
| TCGCCAGAACTAGTTTGAAC+CGG | 0.465526 | 7_3:+60873102 | None:intergenic |
| CGCCAGAACTAGTTTGAACC+GGG | 0.471123 | 7_3:+60873103 | None:intergenic |
| TTCTACAATTTCAACTGGCC+AGG | 0.474476 | 7_3:-60873130 | Msa1114160:CDS |
| CTTGGGACAATGGGTGAATA+CGG | 0.477903 | 7_3:-60872643 | Msa1114160:CDS |
| TATTTGGAACTGCATTGAAT+CGG | 0.493431 | 7_3:-60872366 | Msa1114160:CDS |
| GACAACAGCATCAGGCTCAT+AGG | 0.494062 | 7_3:+60872807 | None:intergenic |
| GCTGAACTTGTTACGAAAGC+TGG | 0.498584 | 7_3:-60872111 | Msa1114160:CDS |
| TGAACTCTCCAGGGTTAGCC+GGG | 0.498798 | 7_3:+60872178 | None:intergenic |
| CCGAAGCGAGTAATGGTCAT+TGG | 0.499010 | 7_3:-60873069 | Msa1114160:CDS |
| CACAGCAAAACAATGTTGTC+GGG | 0.499040 | 7_3:-60872723 | Msa1114160:CDS |
| CACACCAATTTCCTCCATCC+AGG | 0.500313 | 7_3:-60872926 | Msa1114160:CDS |
| AACCTTTGTTAGAAAGGTGG+AGG | 0.503426 | 7_3:+60873016 | None:intergenic |
| TTGCGGTTCAGTACAAAGAC+CGG | 0.508555 | 7_3:-60871933 | Msa1114160:CDS |
| ATTGTCATCTAGTCAAGCTT+GGG | 0.509144 | 7_3:-60872660 | Msa1114160:CDS |
| CCAAATATTGATATTGAGGA+AGG | 0.509151 | 7_3:-60872616 | Msa1114160:CDS |
| GACCGGTCTATCATAGAGTA+AGG | 0.509269 | 7_3:+60872760 | None:intergenic |
| AACTCCAAATATTGATATTG+AGG | 0.510539 | 7_3:-60872620 | Msa1114160:CDS |
| GTAATGGTCATTGGTGGAGA+TGG | 0.511804 | 7_3:-60873060 | Msa1114160:CDS |
| TCTAGTCAAGCTTGGGACAA+TGG | 0.511865 | 7_3:-60872653 | Msa1114160:CDS |
| TCTAACTCCACTCTTGGATT+AGG | 0.511903 | 7_3:+60872051 | None:intergenic |
| GATTGTCATCTAGTCAAGCT+TGG | 0.511909 | 7_3:-60872661 | Msa1114160:CDS |
| TGAGCTTGCCATTGCAAACC+CGG | 0.515121 | 7_3:-60872196 | Msa1114160:CDS |
| CTCCTTACTCTATGATAGAC+CGG | 0.525170 | 7_3:-60872762 | Msa1114160:CDS |
| TTACTCGCTTCGGTTTAAAA+GGG | 0.531134 | 7_3:+60873079 | None:intergenic |
| ATTGCAAACCCGGCTAACCC+TGG | 0.532722 | 7_3:-60872186 | Msa1114160:CDS |
| GTGTATACACAGCTCTTGAC+CGG | 0.533184 | 7_3:+60872743 | None:intergenic |
| ACACAGCAAAACAATGTTGT+CGG | 0.535211 | 7_3:-60872724 | Msa1114160:CDS |
| CGGGCAACTGATCTGAATCA+AGG | 0.540528 | 7_3:-60872463 | Msa1114160:CDS |
| ACATTGAATGCGATCCTGGA+TGG | 0.541607 | 7_3:+60872912 | None:intergenic |
| TGGAGATGGATACTGTGGTT+GGG | 0.542951 | 7_3:-60873046 | Msa1114160:CDS |
| GACACTAAGCAAATTATGCC+TGG | 0.547893 | 7_3:-60871907 | Msa1114160:CDS |
| TAAACAAGGTTTGTTTGAAG+CGG | 0.550343 | 7_3:+60873278 | None:intergenic |
| GCTTTCACTTGCAAAGCTTG+GGG | 0.550528 | 7_3:-60872490 | Msa1114160:CDS |
| ACTCCAAAACTCCATTTAGA+CGG | 0.553484 | 7_3:-60873203 | Msa1114160:CDS |
| TTCAACTGGCCAGGAAACCC+CGG | 0.558412 | 7_3:-60873121 | Msa1114160:CDS |
| TCCAGGATCGCATTCAATGT+TGG | 0.560125 | 7_3:-60872909 | Msa1114160:CDS |
| GTGGAGATGGATACTGTGGT+TGG | 0.563462 | 7_3:-60873047 | Msa1114160:CDS |
| TGTCCTTCCGTTGTGAGTGA+TGG | 0.571830 | 7_3:+60872585 | None:intergenic |
| AGGGTTAGCCGGGTTTGCAA+TGG | 0.573221 | 7_3:+60872188 | None:intergenic |
| AATGTTGGAAATCTCTCACT+GGG | 0.577481 | 7_3:-60872894 | Msa1114160:CDS |
| CGTAACCTTTGTTAGAAAGG+TGG | 0.578750 | 7_3:+60873013 | None:intergenic |
| AAAAGTATTGAGCTATACAT+TGG | 0.580925 | 7_3:-60872871 | Msa1114160:CDS |
| TAGAAAATGATGTTGAGCAT+TGG | 0.583068 | 7_3:+60873244 | None:intergenic |
| AAGCGAGTAATGGTCATTGG+TGG | 0.585308 | 7_3:-60873066 | Msa1114160:CDS |
| CCTTTCTAACAAAGGTTACG+AGG | 0.587127 | 7_3:-60873010 | Msa1114160:CDS |
| CCTTTACCATATACAGTGAG+TGG | 0.594076 | 7_3:+60872316 | None:intergenic |
| GTTTGAAGCGGAGAAAGTCA+AGG | 0.597796 | 7_3:+60873290 | None:intergenic |
| CTTTCACTTGCAAAGCTTGG+GGG | 0.598323 | 7_3:-60872489 | Msa1114160:CDS |
| TGAGAGAATCTAGTCCAAGC+TGG | 0.600491 | 7_3:+60872947 | None:intergenic |
| GCCCTCCACCTTTCTAACAA+AGG | 0.602875 | 7_3:-60873018 | Msa1114160:CDS |
| TGTATCTCTTATGTCAAGGA+AGG | 0.605182 | 7_3:+60872230 | None:intergenic |
| GAACTGTATCTCTTATGTCA+AGG | 0.608223 | 7_3:+60872226 | None:intergenic |
| ACCTTTGTTAGAAAGGTGGA+GGG | 0.612052 | 7_3:+60873017 | None:intergenic |
| AGAGAATCTGAAAGAAAGTG+TGG | 0.612228 | 7_3:+60871976 | None:intergenic |
| TCGAACAAGGTTGTCAACAA+TGG | 0.614328 | 7_3:+60872984 | None:intergenic |
| TGAAGACTCTGAACTCTCCA+GGG | 0.617358 | 7_3:+60872169 | None:intergenic |
| TGATGCTGTTGTCCATTTCG+GGG | 0.617432 | 7_3:-60872797 | Msa1114160:CDS |
| TTACCATCACTCACAACGGA+AGG | 0.617927 | 7_3:-60872588 | Msa1114160:CDS |
| ATCTGTGCCTAATCCAAGAG+TGG | 0.624094 | 7_3:-60872058 | Msa1114160:CDS |
| TGCGGTTCAGTACAAAGACC+GGG | 0.625601 | 7_3:-60871932 | Msa1114160:CDS |
| TTGAATGCGATCCTGGATGG+AGG | 0.626233 | 7_3:+60872915 | None:intergenic |
| TCTTGCGAGAACAGAAACCA+AGG | 0.641034 | 7_3:-60873176 | Msa1114160:CDS |
| ACCTTTCTCCAAGAAACACC+AGG | 0.645278 | 7_3:+60871889 | None:intergenic |
| TAATTTGCTTAGTGTCAACC+CGG | 0.652985 | 7_3:+60871914 | None:intergenic |
| GAATCAAGGAGTGGTATATG+GGG | 0.664294 | 7_3:-60872449 | Msa1114160:CDS |
| AACTGATCTGAATCAAGGAG+TGG | 0.668884 | 7_3:-60872458 | Msa1114160:CDS |
| ATTGGTGGAGATGGATACTG+TGG | 0.674313 | 7_3:-60873051 | Msa1114160:CDS |
| TATATTACCATCACTCACAA+CGG | 0.680492 | 7_3:-60872592 | Msa1114160:CDS |
| GCCAGAACTAGTTTGAACCG+GGG | 0.709774 | 7_3:+60873104 | None:intergenic |
| TGCTATAAAAGAGTACAGAG+AGG | 0.711022 | 7_3:-60872683 | Msa1114160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGTATTGAGCTATACAT+TGG | - | chr7_3:60872305-60872324 | Msa1114160:intron | 25.0% |
| ! | AACTCCAAATATTGATATTG+AGG | - | chr7_3:60872556-60872575 | Msa1114160:CDS | 25.0% |
| ! | TTTGACTATGATGCAATATT+TGG | - | chr7_3:60872794-60872813 | Msa1114160:CDS | 25.0% |
| !!! | AAAAGTATTGAGCTATACAT+TGG | - | chr7_3:60872305-60872324 | Msa1114160:intron | 25.0% |
| ! | AACTCCAAATATTGATATTG+AGG | - | chr7_3:60872556-60872575 | Msa1114160:CDS | 25.0% |
| ! | TTTGACTATGATGCAATATT+TGG | - | chr7_3:60872794-60872813 | Msa1114160:CDS | 25.0% |
| ! | TAAACAAGGTTTGTTTGAAG+CGG | + | chr7_3:60871901-60871920 | None:intergenic | 30.0% |
| !!! | TGGTGAAAAGGTTTTAAACA+AGG | + | chr7_3:60871915-60871934 | None:intergenic | 30.0% |
| TAGAAAATGATGTTGAGCAT+TGG | + | chr7_3:60871935-60871954 | None:intergenic | 30.0% | |
| ! | CTCAACATCATTTTCTAACA+CGG | - | chr7_3:60871938-60871957 | Msa1114160:CDS | 30.0% |
| AATGCTTCTACAATTTCAAC+TGG | - | chr7_3:60872041-60872060 | Msa1114160:CDS | 30.0% | |
| CCTTCCTCAATATCAATATT+TGG | + | chr7_3:60872563-60872582 | None:intergenic | 30.0% | |
| CCAAATATTGATATTGAGGA+AGG | - | chr7_3:60872560-60872579 | Msa1114160:CDS | 30.0% | |
| TATATTACCATCACTCACAA+CGG | - | chr7_3:60872584-60872603 | Msa1114160:CDS | 30.0% | |
| ! | CTCATTTTATCACTTAAGCA+AGG | - | chr7_3:60872643-60872662 | Msa1114160:CDS | 30.0% |
| ! | TATTTGGAACTGCATTGAAT+CGG | - | chr7_3:60872810-60872829 | Msa1114160:CDS | 30.0% |
| CAAATATTGCAAATATTGCC+TGG | + | chr7_3:60872889-60872908 | None:intergenic | 30.0% | |
| AACACTAAACTAGTTGATCT+TGG | - | chr7_3:60873170-60873189 | Msa1114160:CDS | 30.0% | |
| ! | TAAACAAGGTTTGTTTGAAG+CGG | + | chr7_3:60871901-60871920 | None:intergenic | 30.0% |
| !!! | TGGTGAAAAGGTTTTAAACA+AGG | + | chr7_3:60871915-60871934 | None:intergenic | 30.0% |
| TAGAAAATGATGTTGAGCAT+TGG | + | chr7_3:60871935-60871954 | None:intergenic | 30.0% | |
| ! | CTCAACATCATTTTCTAACA+CGG | - | chr7_3:60871938-60871957 | Msa1114160:CDS | 30.0% |
| AATGCTTCTACAATTTCAAC+TGG | - | chr7_3:60872041-60872060 | Msa1114160:CDS | 30.0% | |
| CCTTCCTCAATATCAATATT+TGG | + | chr7_3:60872563-60872582 | None:intergenic | 30.0% | |
| CCAAATATTGATATTGAGGA+AGG | - | chr7_3:60872560-60872579 | Msa1114160:CDS | 30.0% | |
| TATATTACCATCACTCACAA+CGG | - | chr7_3:60872584-60872603 | Msa1114160:CDS | 30.0% | |
| ! | CTCATTTTATCACTTAAGCA+AGG | - | chr7_3:60872643-60872662 | Msa1114160:CDS | 30.0% |
| ! | TATTTGGAACTGCATTGAAT+CGG | - | chr7_3:60872810-60872829 | Msa1114160:CDS | 30.0% |
| CAAATATTGCAAATATTGCC+TGG | + | chr7_3:60872889-60872908 | None:intergenic | 30.0% | |
| AACACTAAACTAGTTGATCT+TGG | - | chr7_3:60873170-60873189 | Msa1114160:CDS | 30.0% | |
| ACTCCAAAACTCCATTTAGA+CGG | - | chr7_3:60871973-60871992 | Msa1114160:CDS | 35.0% | |
| ! | ACAACTGCAAAACTTTTCCT+TGG | + | chr7_3:60872020-60872039 | None:intergenic | 35.0% |
| TTACTCGCTTCGGTTTAAAA+GGG | + | chr7_3:60872100-60872119 | None:intergenic | 35.0% | |
| ATTACTCGCTTCGGTTTAAA+AGG | + | chr7_3:60872101-60872120 | None:intergenic | 35.0% | |
| ! | TTTTAAACCGAAGCGAGTAA+TGG | - | chr7_3:60872100-60872119 | Msa1114160:CDS | 35.0% |
| AATGTTGGAAATCTCTCACT+GGG | - | chr7_3:60872282-60872301 | Msa1114160:intron | 35.0% | |
| ACACAGCAAAACAATGTTGT+CGG | - | chr7_3:60872452-60872471 | Msa1114160:CDS | 35.0% | |
| ! | TGCTATAAAAGAGTACAGAG+AGG | - | chr7_3:60872493-60872512 | Msa1114160:CDS | 35.0% |
| ATTGTCATCTAGTCAAGCTT+GGG | - | chr7_3:60872516-60872535 | Msa1114160:CDS | 35.0% | |
| !! | TAAAATGAGCTAGCTTGCTT+TGG | + | chr7_3:60872632-60872651 | None:intergenic | 35.0% |
| GCAAGTGAAAGCTATGTTAT+GGG | + | chr7_3:60872678-60872697 | None:intergenic | 35.0% | |
| TGCAAGTGAAAGCTATGTTA+TGG | + | chr7_3:60872679-60872698 | None:intergenic | 35.0% | |
| TGAATCAAGGAGTGGTATAT+GGG | - | chr7_3:60872726-60872745 | Msa1114160:CDS | 35.0% | |
| TGATTCACATGTTTCAGACT+AGG | - | chr7_3:60872922-60872941 | Msa1114160:CDS | 35.0% | |
| GATTCACATGTTTCAGACTA+GGG | - | chr7_3:60872923-60872942 | Msa1114160:CDS | 35.0% | |
| TGTATCTCTTATGTCAAGGA+AGG | + | chr7_3:60872949-60872968 | None:intergenic | 35.0% | |
| GAACTGTATCTCTTATGTCA+AGG | + | chr7_3:60872953-60872972 | None:intergenic | 35.0% | |
| ! | CAGATATGGTTTTCACATCA+AGG | + | chr7_3:60873103-60873122 | None:intergenic | 35.0% |
| AGAGAATCTGAAAGAAAGTG+TGG | + | chr7_3:60873203-60873222 | None:intergenic | 35.0% | |
| TGATTCACTGCTTAACTTTG+CGG | - | chr7_3:60873226-60873245 | Msa1114160:CDS | 35.0% | |
| !! | TAATTTGCTTAGTGTCAACC+CGG | + | chr7_3:60873265-60873284 | None:intergenic | 35.0% |
| AAATTATGCCTGGTGTTTCT+TGG | - | chr7_3:60873279-60873298 | Msa1114160:CDS | 35.0% | |
| ACTCCAAAACTCCATTTAGA+CGG | - | chr7_3:60871973-60871992 | Msa1114160:CDS | 35.0% | |
| ! | ACAACTGCAAAACTTTTCCT+TGG | + | chr7_3:60872020-60872039 | None:intergenic | 35.0% |
| TTACTCGCTTCGGTTTAAAA+GGG | + | chr7_3:60872100-60872119 | None:intergenic | 35.0% | |
| ATTACTCGCTTCGGTTTAAA+AGG | + | chr7_3:60872101-60872120 | None:intergenic | 35.0% | |
| ! | TTTTAAACCGAAGCGAGTAA+TGG | - | chr7_3:60872100-60872119 | Msa1114160:CDS | 35.0% |
| AATGTTGGAAATCTCTCACT+GGG | - | chr7_3:60872282-60872301 | Msa1114160:intron | 35.0% | |
| ACACAGCAAAACAATGTTGT+CGG | - | chr7_3:60872452-60872471 | Msa1114160:CDS | 35.0% | |
| ! | TGCTATAAAAGAGTACAGAG+AGG | - | chr7_3:60872493-60872512 | Msa1114160:CDS | 35.0% |
| ATTGTCATCTAGTCAAGCTT+GGG | - | chr7_3:60872516-60872535 | Msa1114160:CDS | 35.0% | |
| !! | TAAAATGAGCTAGCTTGCTT+TGG | + | chr7_3:60872632-60872651 | None:intergenic | 35.0% |
| GCAAGTGAAAGCTATGTTAT+GGG | + | chr7_3:60872678-60872697 | None:intergenic | 35.0% | |
| TGCAAGTGAAAGCTATGTTA+TGG | + | chr7_3:60872679-60872698 | None:intergenic | 35.0% | |
| TGAATCAAGGAGTGGTATAT+GGG | - | chr7_3:60872726-60872745 | Msa1114160:CDS | 35.0% | |
| TGATTCACATGTTTCAGACT+AGG | - | chr7_3:60872922-60872941 | Msa1114160:CDS | 35.0% | |
| GATTCACATGTTTCAGACTA+GGG | - | chr7_3:60872923-60872942 | Msa1114160:CDS | 35.0% | |
| TGTATCTCTTATGTCAAGGA+AGG | + | chr7_3:60872949-60872968 | None:intergenic | 35.0% | |
| GAACTGTATCTCTTATGTCA+AGG | + | chr7_3:60872953-60872972 | None:intergenic | 35.0% | |
| ! | CAGATATGGTTTTCACATCA+AGG | + | chr7_3:60873103-60873122 | None:intergenic | 35.0% |
| AGAGAATCTGAAAGAAAGTG+TGG | + | chr7_3:60873203-60873222 | None:intergenic | 35.0% | |
| TGATTCACTGCTTAACTTTG+CGG | - | chr7_3:60873226-60873245 | Msa1114160:CDS | 35.0% | |
| !! | TAATTTGCTTAGTGTCAACC+CGG | + | chr7_3:60873265-60873284 | None:intergenic | 35.0% |
| AAATTATGCCTGGTGTTTCT+TGG | - | chr7_3:60873279-60873298 | Msa1114160:CDS | 35.0% | |
| !! | GATGTTGAGCATTGGTGAAA+AGG | + | chr7_3:60871927-60871946 | None:intergenic | 40.0% |
| ! | AAGCCGTCTAAATGGAGTTT+TGG | + | chr7_3:60871979-60871998 | None:intergenic | 40.0% |
| TTCTACAATTTCAACTGGCC+AGG | - | chr7_3:60872046-60872065 | Msa1114160:CDS | 40.0% | |
| ACCTTTGTTAGAAAGGTGGA+GGG | + | chr7_3:60872162-60872181 | None:intergenic | 40.0% | |
| AACCTTTGTTAGAAAGGTGG+AGG | + | chr7_3:60872163-60872182 | None:intergenic | 40.0% | |
| CGTAACCTTTGTTAGAAAGG+TGG | + | chr7_3:60872166-60872185 | None:intergenic | 40.0% | |
| CCTCGTAACCTTTGTTAGAA+AGG | + | chr7_3:60872169-60872188 | None:intergenic | 40.0% | |
| CCTTTCTAACAAAGGTTACG+AGG | - | chr7_3:60872166-60872185 | Msa1114160:CDS | 40.0% | |
| TCGAACAAGGTTGTCAACAA+TGG | + | chr7_3:60872195-60872214 | None:intergenic | 40.0% | |
| GATCAAAAAGACGTCGAACA+AGG | + | chr7_3:60872208-60872227 | None:intergenic | 40.0% | |
| CAATGTTGGAAATCTCTCAC+TGG | - | chr7_3:60872281-60872300 | Msa1114160:intron | 40.0% | |
| CTCATAGGACTTGAAGGTTT+CGG | + | chr7_3:60872357-60872376 | None:intergenic | 40.0% | |
| CTCCTTACTCTATGATAGAC+CGG | - | chr7_3:60872414-60872433 | Msa1114160:CDS | 40.0% | |
| CACAGCAAAACAATGTTGTC+GGG | - | chr7_3:60872453-60872472 | Msa1114160:CDS | 40.0% | |
| GATTGTCATCTAGTCAAGCT+TGG | - | chr7_3:60872515-60872534 | Msa1114160:CDS | 40.0% | |
| TAGCTTTCACTTGCAAAGCT+TGG | - | chr7_3:60872684-60872703 | Msa1114160:CDS | 40.0% | |
| AGCTTTCACTTGCAAAGCTT+GGG | - | chr7_3:60872685-60872704 | Msa1114160:CDS | 40.0% | |
| AACTGATCTGAATCAAGGAG+TGG | - | chr7_3:60872718-60872737 | Msa1114160:CDS | 40.0% | |
| CTGAATCAAGGAGTGGTATA+TGG | - | chr7_3:60872725-60872744 | Msa1114160:CDS | 40.0% | |
| GAATCAAGGAGTGGTATATG+GGG | - | chr7_3:60872727-60872746 | Msa1114160:CDS | 40.0% | |
| TGCATGAAGAGTTGTGTAAC+AGG | - | chr7_3:60872771-60872790 | Msa1114160:CDS | 40.0% | |
| ! | ATTGAATCGGTTCTGTGTTC+AGG | - | chr7_3:60872823-60872842 | Msa1114160:CDS | 40.0% |
| CCTTTACCATATACAGTGAG+TGG | + | chr7_3:60872863-60872882 | None:intergenic | 40.0% | |
| CCACTCACTGTATATGGTAA+AGG | - | chr7_3:60872860-60872879 | Msa1114160:CDS | 40.0% | |
| CTCACTGTATATGGTAAAGG+AGG | - | chr7_3:60872863-60872882 | Msa1114160:CDS | 40.0% | |
| ! | TCTTGGATTAGGCACAGATA+TGG | + | chr7_3:60873117-60873136 | None:intergenic | 40.0% |
| TCTAACTCCACTCTTGGATT+AGG | + | chr7_3:60873128-60873147 | None:intergenic | 40.0% | |
| TAATCCAAGAGTGGAGTTAG+AGG | - | chr7_3:60873127-60873146 | Msa1114160:CDS | 40.0% | |
| GACACTAAGCAAATTATGCC+TGG | - | chr7_3:60873269-60873288 | Msa1114160:CDS | 40.0% | |
| GTGTTTCTTGGAGAAAGGTT+GGG | - | chr7_3:60873291-60873310 | Msa1114160:CDS | 40.0% | |
| TGTTTCTTGGAGAAAGGTTG+GGG | - | chr7_3:60873292-60873311 | Msa1114160:CDS | 40.0% | |
| !! | GATGTTGAGCATTGGTGAAA+AGG | + | chr7_3:60871927-60871946 | None:intergenic | 40.0% |
| ! | AAGCCGTCTAAATGGAGTTT+TGG | + | chr7_3:60871979-60871998 | None:intergenic | 40.0% |
| TTCTACAATTTCAACTGGCC+AGG | - | chr7_3:60872046-60872065 | Msa1114160:CDS | 40.0% | |
| ACCTTTGTTAGAAAGGTGGA+GGG | + | chr7_3:60872162-60872181 | None:intergenic | 40.0% | |
| AACCTTTGTTAGAAAGGTGG+AGG | + | chr7_3:60872163-60872182 | None:intergenic | 40.0% | |
| CGTAACCTTTGTTAGAAAGG+TGG | + | chr7_3:60872166-60872185 | None:intergenic | 40.0% | |
| CCTCGTAACCTTTGTTAGAA+AGG | + | chr7_3:60872169-60872188 | None:intergenic | 40.0% | |
| CCTTTCTAACAAAGGTTACG+AGG | - | chr7_3:60872166-60872185 | Msa1114160:CDS | 40.0% | |
| TCGAACAAGGTTGTCAACAA+TGG | + | chr7_3:60872195-60872214 | None:intergenic | 40.0% | |
| GATCAAAAAGACGTCGAACA+AGG | + | chr7_3:60872208-60872227 | None:intergenic | 40.0% | |
| CAATGTTGGAAATCTCTCAC+TGG | - | chr7_3:60872281-60872300 | Msa1114160:intron | 40.0% | |
| CTCATAGGACTTGAAGGTTT+CGG | + | chr7_3:60872357-60872376 | None:intergenic | 40.0% | |
| CTCCTTACTCTATGATAGAC+CGG | - | chr7_3:60872414-60872433 | Msa1114160:CDS | 40.0% | |
| CACAGCAAAACAATGTTGTC+GGG | - | chr7_3:60872453-60872472 | Msa1114160:CDS | 40.0% | |
| GATTGTCATCTAGTCAAGCT+TGG | - | chr7_3:60872515-60872534 | Msa1114160:CDS | 40.0% | |
| TAGCTTTCACTTGCAAAGCT+TGG | - | chr7_3:60872684-60872703 | Msa1114160:CDS | 40.0% | |
| AGCTTTCACTTGCAAAGCTT+GGG | - | chr7_3:60872685-60872704 | Msa1114160:CDS | 40.0% | |
| AACTGATCTGAATCAAGGAG+TGG | - | chr7_3:60872718-60872737 | Msa1114160:CDS | 40.0% | |
| CTGAATCAAGGAGTGGTATA+TGG | - | chr7_3:60872725-60872744 | Msa1114160:CDS | 40.0% | |
| GAATCAAGGAGTGGTATATG+GGG | - | chr7_3:60872727-60872746 | Msa1114160:CDS | 40.0% | |
| TGCATGAAGAGTTGTGTAAC+AGG | - | chr7_3:60872771-60872790 | Msa1114160:CDS | 40.0% | |
| ! | ATTGAATCGGTTCTGTGTTC+AGG | - | chr7_3:60872823-60872842 | Msa1114160:CDS | 40.0% |
| CCTTTACCATATACAGTGAG+TGG | + | chr7_3:60872863-60872882 | None:intergenic | 40.0% | |
| CCACTCACTGTATATGGTAA+AGG | - | chr7_3:60872860-60872879 | Msa1114160:CDS | 40.0% | |
| CTCACTGTATATGGTAAAGG+AGG | - | chr7_3:60872863-60872882 | Msa1114160:CDS | 40.0% | |
| ! | TCTTGGATTAGGCACAGATA+TGG | + | chr7_3:60873117-60873136 | None:intergenic | 40.0% |
| TCTAACTCCACTCTTGGATT+AGG | + | chr7_3:60873128-60873147 | None:intergenic | 40.0% | |
| TAATCCAAGAGTGGAGTTAG+AGG | - | chr7_3:60873127-60873146 | Msa1114160:CDS | 40.0% | |
| GACACTAAGCAAATTATGCC+TGG | - | chr7_3:60873269-60873288 | Msa1114160:CDS | 40.0% | |
| GTGTTTCTTGGAGAAAGGTT+GGG | - | chr7_3:60873291-60873310 | Msa1114160:CDS | 40.0% | |
| TGTTTCTTGGAGAAAGGTTG+GGG | - | chr7_3:60873292-60873311 | Msa1114160:CDS | 40.0% | |
| ! | GTTTGAAGCGGAGAAAGTCA+AGG | + | chr7_3:60871889-60871908 | None:intergenic | 45.0% |
| CGCAAGAAAAGCCGTCTAAA+TGG | + | chr7_3:60871987-60872006 | None:intergenic | 45.0% | |
| TCTTGCGAGAACAGAAACCA+AGG | - | chr7_3:60872000-60872019 | Msa1114160:CDS | 45.0% | |
| ! | TCGCCAGAACTAGTTTGAAC+CGG | + | chr7_3:60872077-60872096 | None:intergenic | 45.0% |
| CCAATGACCATTACTCGCTT+CGG | + | chr7_3:60872110-60872129 | None:intergenic | 45.0% | |
| AAGCGAGTAATGGTCATTGG+TGG | - | chr7_3:60872110-60872129 | Msa1114160:CDS | 45.0% | |
| GTAATGGTCATTGGTGGAGA+TGG | - | chr7_3:60872116-60872135 | Msa1114160:CDS | 45.0% | |
| ATTGGTGGAGATGGATACTG+TGG | - | chr7_3:60872125-60872144 | Msa1114160:CDS | 45.0% | |
| TGGAGATGGATACTGTGGTT+GGG | - | chr7_3:60872130-60872149 | Msa1114160:CDS | 45.0% | |
| ! | CGTCTTTTTGATCACCAGCT+TGG | - | chr7_3:60872215-60872234 | Msa1114160:CDS | 45.0% |
| TGAGAGAATCTAGTCCAAGC+TGG | + | chr7_3:60872232-60872251 | None:intergenic | 45.0% | |
| ACATTGAATGCGATCCTGGA+TGG | + | chr7_3:60872267-60872286 | None:intergenic | 45.0% | |
| TCCAGGATCGCATTCAATGT+TGG | - | chr7_3:60872267-60872286 | Msa1114160:intron | 45.0% | |
| TCCAACATTGAATGCGATCC+TGG | + | chr7_3:60872271-60872290 | None:intergenic | 45.0% | |
| ATCAGGCTCATAGGACTTGA+AGG | + | chr7_3:60872363-60872382 | None:intergenic | 45.0% | |
| CCTGATGCTGTTGTCCATTT+CGG | - | chr7_3:60872377-60872396 | Msa1114160:CDS | 45.0% | |
| CTGATGCTGTTGTCCATTTC+GGG | - | chr7_3:60872378-60872397 | Msa1114160:CDS | 45.0% | |
| TGATGCTGTTGTCCATTTCG+GGG | - | chr7_3:60872379-60872398 | Msa1114160:CDS | 45.0% | |
| GACCGGTCTATCATAGAGTA+AGG | + | chr7_3:60872419-60872438 | None:intergenic | 45.0% | |
| GTGTATACACAGCTCTTGAC+CGG | + | chr7_3:60872436-60872455 | None:intergenic | 45.0% | |
| TCTAGTCAAGCTTGGGACAA+TGG | - | chr7_3:60872523-60872542 | Msa1114160:CDS | 45.0% | |
| CTAGTCAAGCTTGGGACAAT+GGG | - | chr7_3:60872524-60872543 | Msa1114160:CDS | 45.0% | |
| CTTGGGACAATGGGTGAATA+CGG | - | chr7_3:60872533-60872552 | Msa1114160:CDS | 45.0% | |
| TTACCATCACTCACAACGGA+AGG | - | chr7_3:60872588-60872607 | Msa1114160:CDS | 45.0% | |
| !! | GAGCTAGCTTGCTTTGGATA+TGG | + | chr7_3:60872626-60872645 | None:intergenic | 45.0% |
| GCTTTCACTTGCAAAGCTTG+GGG | - | chr7_3:60872686-60872705 | Msa1114160:CDS | 45.0% | |
| CTTTCACTTGCAAAGCTTGG+GGG | - | chr7_3:60872687-60872706 | Msa1114160:CDS | 45.0% | |
| GGTCATCCACTCACTGTATA+TGG | - | chr7_3:60872854-60872873 | Msa1114160:CDS | 45.0% | |
| TGTATATGGTAAAGGAGGCC+AGG | - | chr7_3:60872868-60872887 | Msa1114160:CDS | 45.0% | |
| TGAAGACTCTGAACTCTCCA+GGG | + | chr7_3:60873010-60873029 | None:intergenic | 45.0% | |
| TTGAAGACTCTGAACTCTCC+AGG | + | chr7_3:60873011-60873030 | None:intergenic | 45.0% | |
| !! | GCTGAACTTGTTACGAAAGC+TGG | - | chr7_3:60873065-60873084 | Msa1114160:CDS | 45.0% |
| ATCTGTGCCTAATCCAAGAG+TGG | - | chr7_3:60873118-60873137 | Msa1114160:CDS | 45.0% | |
| TTGCGGTTCAGTACAAAGAC+CGG | - | chr7_3:60873243-60873262 | Msa1114160:CDS | 45.0% | |
| ACCTTTCTCCAAGAAACACC+AGG | + | chr7_3:60873290-60873309 | None:intergenic | 45.0% | |
| GGTGTTTCTTGGAGAAAGGT+TGG | - | chr7_3:60873290-60873309 | Msa1114160:CDS | 45.0% | |
| ! | GTTTGAAGCGGAGAAAGTCA+AGG | + | chr7_3:60871889-60871908 | None:intergenic | 45.0% |
| CGCAAGAAAAGCCGTCTAAA+TGG | + | chr7_3:60871987-60872006 | None:intergenic | 45.0% | |
| TCTTGCGAGAACAGAAACCA+AGG | - | chr7_3:60872000-60872019 | Msa1114160:CDS | 45.0% | |
| ! | TCGCCAGAACTAGTTTGAAC+CGG | + | chr7_3:60872077-60872096 | None:intergenic | 45.0% |
| CCAATGACCATTACTCGCTT+CGG | + | chr7_3:60872110-60872129 | None:intergenic | 45.0% | |
| AAGCGAGTAATGGTCATTGG+TGG | - | chr7_3:60872110-60872129 | Msa1114160:CDS | 45.0% | |
| GTAATGGTCATTGGTGGAGA+TGG | - | chr7_3:60872116-60872135 | Msa1114160:CDS | 45.0% | |
| ATTGGTGGAGATGGATACTG+TGG | - | chr7_3:60872125-60872144 | Msa1114160:CDS | 45.0% | |
| TGGAGATGGATACTGTGGTT+GGG | - | chr7_3:60872130-60872149 | Msa1114160:CDS | 45.0% | |
| ! | CGTCTTTTTGATCACCAGCT+TGG | - | chr7_3:60872215-60872234 | Msa1114160:CDS | 45.0% |
| TGAGAGAATCTAGTCCAAGC+TGG | + | chr7_3:60872232-60872251 | None:intergenic | 45.0% | |
| ACATTGAATGCGATCCTGGA+TGG | + | chr7_3:60872267-60872286 | None:intergenic | 45.0% | |
| TCCAGGATCGCATTCAATGT+TGG | - | chr7_3:60872267-60872286 | Msa1114160:intron | 45.0% | |
| TCCAACATTGAATGCGATCC+TGG | + | chr7_3:60872271-60872290 | None:intergenic | 45.0% | |
| ATCAGGCTCATAGGACTTGA+AGG | + | chr7_3:60872363-60872382 | None:intergenic | 45.0% | |
| CCTGATGCTGTTGTCCATTT+CGG | - | chr7_3:60872377-60872396 | Msa1114160:CDS | 45.0% | |
| CTGATGCTGTTGTCCATTTC+GGG | - | chr7_3:60872378-60872397 | Msa1114160:CDS | 45.0% | |
| TGATGCTGTTGTCCATTTCG+GGG | - | chr7_3:60872379-60872398 | Msa1114160:CDS | 45.0% | |
| GACCGGTCTATCATAGAGTA+AGG | + | chr7_3:60872419-60872438 | None:intergenic | 45.0% | |
| GTGTATACACAGCTCTTGAC+CGG | + | chr7_3:60872436-60872455 | None:intergenic | 45.0% | |
| TCTAGTCAAGCTTGGGACAA+TGG | - | chr7_3:60872523-60872542 | Msa1114160:CDS | 45.0% | |
| CTAGTCAAGCTTGGGACAAT+GGG | - | chr7_3:60872524-60872543 | Msa1114160:CDS | 45.0% | |
| CTTGGGACAATGGGTGAATA+CGG | - | chr7_3:60872533-60872552 | Msa1114160:CDS | 45.0% | |
| TTACCATCACTCACAACGGA+AGG | - | chr7_3:60872588-60872607 | Msa1114160:CDS | 45.0% | |
| !! | GAGCTAGCTTGCTTTGGATA+TGG | + | chr7_3:60872626-60872645 | None:intergenic | 45.0% |
| GCTTTCACTTGCAAAGCTTG+GGG | - | chr7_3:60872686-60872705 | Msa1114160:CDS | 45.0% | |
| CTTTCACTTGCAAAGCTTGG+GGG | - | chr7_3:60872687-60872706 | Msa1114160:CDS | 45.0% | |
| GGTCATCCACTCACTGTATA+TGG | - | chr7_3:60872854-60872873 | Msa1114160:CDS | 45.0% | |
| TGTATATGGTAAAGGAGGCC+AGG | - | chr7_3:60872868-60872887 | Msa1114160:CDS | 45.0% | |
| TGAAGACTCTGAACTCTCCA+GGG | + | chr7_3:60873010-60873029 | None:intergenic | 45.0% | |
| TTGAAGACTCTGAACTCTCC+AGG | + | chr7_3:60873011-60873030 | None:intergenic | 45.0% | |
| !! | GCTGAACTTGTTACGAAAGC+TGG | - | chr7_3:60873065-60873084 | Msa1114160:CDS | 45.0% |
| ATCTGTGCCTAATCCAAGAG+TGG | - | chr7_3:60873118-60873137 | Msa1114160:CDS | 45.0% | |
| TTGCGGTTCAGTACAAAGAC+CGG | - | chr7_3:60873243-60873262 | Msa1114160:CDS | 45.0% | |
| ACCTTTCTCCAAGAAACACC+AGG | + | chr7_3:60873290-60873309 | None:intergenic | 45.0% | |
| GGTGTTTCTTGGAGAAAGGT+TGG | - | chr7_3:60873290-60873309 | Msa1114160:CDS | 45.0% | |
| TAGTTTGAACCGGGGTTTCC+TGG | + | chr7_3:60872067-60872086 | None:intergenic | 50.0% | |
| ACCCCGGTTCAAACTAGTTC+TGG | - | chr7_3:60872071-60872090 | Msa1114160:CDS | 50.0% | |
| ! | GCCAGAACTAGTTTGAACCG+GGG | + | chr7_3:60872075-60872094 | None:intergenic | 50.0% |
| ! | CGCCAGAACTAGTTTGAACC+GGG | + | chr7_3:60872076-60872095 | None:intergenic | 50.0% |
| CCGAAGCGAGTAATGGTCAT+TGG | - | chr7_3:60872107-60872126 | Msa1114160:CDS | 50.0% | |
| GTGGAGATGGATACTGTGGT+TGG | - | chr7_3:60872129-60872148 | Msa1114160:CDS | 50.0% | |
| GCCCTCCACCTTTCTAACAA+AGG | - | chr7_3:60872158-60872177 | Msa1114160:CDS | 50.0% | |
| CACACCAATTTCCTCCATCC+AGG | - | chr7_3:60872250-60872269 | Msa1114160:intron | 50.0% | |
| CGATCCTGGATGGAGGAAAT+TGG | + | chr7_3:60872257-60872276 | None:intergenic | 50.0% | |
| TTGAATGCGATCCTGGATGG+AGG | + | chr7_3:60872264-60872283 | None:intergenic | 50.0% | |
| GACAACAGCATCAGGCTCAT+AGG | + | chr7_3:60872372-60872391 | None:intergenic | 50.0% | |
| CCGAAATGGACAACAGCATC+AGG | + | chr7_3:60872380-60872399 | None:intergenic | 50.0% | |
| TGTCCTTCCGTTGTGAGTGA+TGG | + | chr7_3:60872594-60872613 | None:intergenic | 50.0% | |
| CTTGCAAAGCTTGGGGGATT+CGG | - | chr7_3:60872693-60872712 | Msa1114160:CDS | 50.0% | |
| TTGCAAAGCTTGGGGGATTC+GGG | - | chr7_3:60872694-60872713 | Msa1114160:CDS | 50.0% | |
| CGGGCAACTGATCTGAATCA+AGG | - | chr7_3:60872713-60872732 | Msa1114160:CDS | 50.0% | |
| TTCTGTGTTCAGGCTGCTGT+TGG | - | chr7_3:60872833-60872852 | Msa1114160:CDS | 50.0% | |
| TGAGCTTGCCATTGCAAACC+CGG | - | chr7_3:60872980-60872999 | Msa1114160:CDS | 50.0% | |
| TACGAAAGCTGGCGAGAAGT+TGG | - | chr7_3:60873076-60873095 | Msa1114160:CDS | 50.0% | |
| ACGAAAGCTGGCGAGAAGTT+GGG | - | chr7_3:60873077-60873096 | Msa1114160:CDS | 50.0% | |
| TGCTCCTCTAACTCCACTCT+TGG | + | chr7_3:60873134-60873153 | None:intergenic | 50.0% | |
| TGCGGTTCAGTACAAAGACC+GGG | - | chr7_3:60873244-60873263 | Msa1114160:CDS | 50.0% | |
| GCCTGGTGTTTCTTGGAGAA+AGG | - | chr7_3:60873286-60873305 | Msa1114160:CDS | 50.0% | |
| TAGTTTGAACCGGGGTTTCC+TGG | + | chr7_3:60872067-60872086 | None:intergenic | 50.0% | |
| ACCCCGGTTCAAACTAGTTC+TGG | - | chr7_3:60872071-60872090 | Msa1114160:CDS | 50.0% | |
| ! | GCCAGAACTAGTTTGAACCG+GGG | + | chr7_3:60872075-60872094 | None:intergenic | 50.0% |
| ! | CGCCAGAACTAGTTTGAACC+GGG | + | chr7_3:60872076-60872095 | None:intergenic | 50.0% |
| CCGAAGCGAGTAATGGTCAT+TGG | - | chr7_3:60872107-60872126 | Msa1114160:CDS | 50.0% | |
| GTGGAGATGGATACTGTGGT+TGG | - | chr7_3:60872129-60872148 | Msa1114160:CDS | 50.0% | |
| GCCCTCCACCTTTCTAACAA+AGG | - | chr7_3:60872158-60872177 | Msa1114160:CDS | 50.0% | |
| CACACCAATTTCCTCCATCC+AGG | - | chr7_3:60872250-60872269 | Msa1114160:intron | 50.0% | |
| CGATCCTGGATGGAGGAAAT+TGG | + | chr7_3:60872257-60872276 | None:intergenic | 50.0% | |
| TTGAATGCGATCCTGGATGG+AGG | + | chr7_3:60872264-60872283 | None:intergenic | 50.0% | |
| GACAACAGCATCAGGCTCAT+AGG | + | chr7_3:60872372-60872391 | None:intergenic | 50.0% | |
| CCGAAATGGACAACAGCATC+AGG | + | chr7_3:60872380-60872399 | None:intergenic | 50.0% | |
| TGTCCTTCCGTTGTGAGTGA+TGG | + | chr7_3:60872594-60872613 | None:intergenic | 50.0% | |
| CTTGCAAAGCTTGGGGGATT+CGG | - | chr7_3:60872693-60872712 | Msa1114160:CDS | 50.0% | |
| TTGCAAAGCTTGGGGGATTC+GGG | - | chr7_3:60872694-60872713 | Msa1114160:CDS | 50.0% | |
| CGGGCAACTGATCTGAATCA+AGG | - | chr7_3:60872713-60872732 | Msa1114160:CDS | 50.0% | |
| TTCTGTGTTCAGGCTGCTGT+TGG | - | chr7_3:60872833-60872852 | Msa1114160:CDS | 50.0% | |
| TGAGCTTGCCATTGCAAACC+CGG | - | chr7_3:60872980-60872999 | Msa1114160:CDS | 50.0% | |
| TACGAAAGCTGGCGAGAAGT+TGG | - | chr7_3:60873076-60873095 | Msa1114160:CDS | 50.0% | |
| ACGAAAGCTGGCGAGAAGTT+GGG | - | chr7_3:60873077-60873096 | Msa1114160:CDS | 50.0% | |
| TGCTCCTCTAACTCCACTCT+TGG | + | chr7_3:60873134-60873153 | None:intergenic | 50.0% | |
| TGCGGTTCAGTACAAAGACC+GGG | - | chr7_3:60873244-60873263 | Msa1114160:CDS | 50.0% | |
| GCCTGGTGTTTCTTGGAGAA+AGG | - | chr7_3:60873286-60873305 | Msa1114160:CDS | 50.0% | |
| TTCAACTGGCCAGGAAACCC+CGG | - | chr7_3:60872055-60872074 | Msa1114160:CDS | 55.0% | |
| CAGATCGCTGTTCCCCGAAA+TGG | + | chr7_3:60872394-60872413 | None:intergenic | 55.0% | |
| !! | AGGGTTAGCCGGGTTTGCAA+TGG | + | chr7_3:60872991-60873010 | None:intergenic | 55.0% |
| ATTGCAAACCCGGCTAACCC+TGG | - | chr7_3:60872990-60873009 | Msa1114160:CDS | 55.0% | |
| !! | TGAACTCTCCAGGGTTAGCC+GGG | + | chr7_3:60873001-60873020 | None:intergenic | 55.0% |
| ! | CTGAACTCTCCAGGGTTAGC+CGG | + | chr7_3:60873002-60873021 | None:intergenic | 55.0% |
| TTCAACTGGCCAGGAAACCC+CGG | - | chr7_3:60872055-60872074 | Msa1114160:CDS | 55.0% | |
| CAGATCGCTGTTCCCCGAAA+TGG | + | chr7_3:60872394-60872413 | None:intergenic | 55.0% | |
| !! | AGGGTTAGCCGGGTTTGCAA+TGG | + | chr7_3:60872991-60873010 | None:intergenic | 55.0% |
| ATTGCAAACCCGGCTAACCC+TGG | - | chr7_3:60872990-60873009 | Msa1114160:CDS | 55.0% | |
| !! | TGAACTCTCCAGGGTTAGCC+GGG | + | chr7_3:60873001-60873020 | None:intergenic | 55.0% |
| ! | CTGAACTCTCCAGGGTTAGC+CGG | + | chr7_3:60873002-60873021 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 60871858 | 60873340 | 60871858 | ID=Msa1114160;Name=Msa1114160 |
| chr7_3 | mRNA | 60871858 | 60873340 | 60871858 | ID=Msa1114160-mRNA-1;Parent=Msa1114160;Name=Msa1114160-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|470 |
| chr7_3 | exon | 60872330 | 60873340 | 60872330 | ID=Msa1114160-mRNA-1:exon:13746;Parent=Msa1114160-mRNA-1 |
| chr7_3 | exon | 60871858 | 60872259 | 60871858 | ID=Msa1114160-mRNA-1:exon:13745;Parent=Msa1114160-mRNA-1 |
| chr7_3 | CDS | 60872330 | 60873340 | 60872330 | ID=Msa1114160-mRNA-1:cds;Parent=Msa1114160-mRNA-1 |
| chr7_3 | CDS | 60871858 | 60872259 | 60871858 | ID=Msa1114160-mRNA-1:cds;Parent=Msa1114160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
