Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160110 | XP_003625059.1 | 94.235 | 451 | 6 | 2 | 1 | 431 | 1 | 451 | 0.0 | 871 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160110 | sp|Q84KI6|SQD1_SPIOL | 73.304 | 457 | 95 | 3 | 1 | 431 | 1 | 456 | 0.0 | 683 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160110 | G7KRQ8 | 94.235 | 451 | 6 | 2 | 1 | 431 | 1 | 451 | 0.0 | 871 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1114160 | Msa1160110 | 0.838514 | 2.749244e-57 | -8.615850e-47 |
| Msa1160110 | Msa1160130 | 0.814370 | 1.594967e-51 | -8.615850e-47 |
| Msa0970890 | Msa1160110 | 0.803651 | 3.149386e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160110 | MtrunA17_Chr7g0256731 | 94.235 | 451 | 6 | 2 | 1 | 431 | 1 | 451 | 0.0 | 871 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160110 | AT4G33030.1 | 73.846 | 455 | 91 | 5 | 1 | 431 | 1 | 451 | 0.0 | 656 |
Find 111 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGACTATGATGCAATATT+TGG | 0.140392 | 7_4:-49884400 | Msa1160110:CDS |
| CTGATGCTGTTGTTCATTTC+GGG | 0.148751 | 7_4:-49884816 | Msa1160110:CDS |
| CCTTCCTCAATATCAATATT+TGG | 0.201469 | 7_4:+49884634 | None:intergenic |
| CCTGATGCTGTTGTTCATTT+CGG | 0.235709 | 7_4:-49884817 | Msa1160110:CDS |
| CTGAATCAAGGAGTTGTATA+TGG | 0.269066 | 7_4:-49884469 | Msa1160110:CDS |
| CGCAAGAAAAGCCGTCTAAA+TGG | 0.294684 | 7_4:+49885195 | None:intergenic |
| AGCTTTCACTTGCAAAGCTT+GGG | 0.304992 | 7_4:-49884509 | Msa1160110:CDS |
| TAGTTTGAACCGGGGTTTCC+TGG | 0.318034 | 7_4:+49885115 | None:intergenic |
| AAATTATGCCTGGTGTTTCT+TGG | 0.333741 | 7_4:-49883932 | Msa1160110:CDS |
| TGCAAGTGAAAGCTATGTTA+TGG | 0.335168 | 7_4:+49884518 | None:intergenic |
| GGTCATCCACTCACTGTATA+TGG | 0.336464 | 7_4:-49884340 | Msa1160110:intron |
| GAGCTAGCTTGCTTTGGATA+TGG | 0.338990 | 7_4:+49884571 | None:intergenic |
| GTGTTTCTTGGAGAAAGGTT+GGG | 0.344780 | 7_4:-49883920 | Msa1160110:CDS |
| AAGCCGTCTAAATGGAGTTT+TGG | 0.349474 | 7_4:+49885203 | None:intergenic |
| TGCATGAAGAGTTGTGTAAC+AGG | 0.360759 | 7_4:-49884423 | Msa1160110:CDS |
| CTCATAGGACTTGAAGGTTT+CGG | 0.374096 | 7_4:+49884840 | None:intergenic |
| CGATCCTGGATGGAGGAAAT+TGG | 0.387488 | 7_4:+49884940 | None:intergenic |
| GCAAGTGAAAGCTATGTTAT+GGG | 0.394552 | 7_4:+49884519 | None:intergenic |
| AACACTAAACTAGTTGATCT+TGG | 0.398824 | 7_4:-49884024 | Msa1160110:CDS |
| TAAAATGAGCTAGCTTGCTT+TGG | 0.399512 | 7_4:+49884565 | None:intergenic |
| TCCAACACTGAATGCGATCC+TGG | 0.403609 | 7_4:+49884926 | None:intergenic |
| TCTTGGATTAGGCACAGATA+TGG | 0.408241 | 7_4:+49884080 | None:intergenic |
| GGTGTTTCTTGGAGAAAGGT+TGG | 0.408948 | 7_4:-49883921 | Msa1160110:CDS |
| TAGCTTTCACTTGCAAAGCT+TGG | 0.414968 | 7_4:-49884510 | Msa1160110:CDS |
| TAATCCAAGAGTGGAGTTAG+AGG | 0.427522 | 7_4:-49884067 | Msa1160110:CDS |
| GCCAGAACGCTAGTTTGAAC+CGG | 0.433460 | 7_4:+49885105 | None:intergenic |
| TTGAAGACTCTGAACTCTCC+AGG | 0.434551 | 7_4:+49884186 | None:intergenic |
| CCCGGTTCAAACTAGCGTTC+TGG | 0.439421 | 7_4:-49885106 | Msa1160110:CDS |
| TGCTCCTCTAACTCCACTCT+TGG | 0.440560 | 7_4:+49884063 | None:intergenic |
| TACGAAAGCTGGCGAGAAGT+TGG | 0.440566 | 7_4:-49884118 | Msa1160110:CDS |
| TTCATCCTAAGGTGTGTGCT+TGG | 0.443590 | 7_4:-49883880 | Msa1160110:CDS |
| ATCAGGCTCATAGGACTTGA+AGG | 0.444397 | 7_4:+49884834 | None:intergenic |
| AATGCTTCTACAATTTCAAC+TGG | 0.445402 | 7_4:-49885138 | Msa1160110:CDS |
| CTGAACTCTCCAGGGTTAGC+CGG | 0.447834 | 7_4:+49884195 | None:intergenic |
| CTAGTCAAGCTTGGGACAAT+GGG | 0.448728 | 7_4:-49884670 | Msa1160110:CDS |
| ACTGAATCGGTTCTGTGTTC+AGG | 0.449665 | 7_4:-49884371 | Msa1160110:CDS |
| TTCTGTGTTCAGGCTGCTGT+TGG | 0.451203 | 7_4:-49884361 | Msa1160110:CDS |
| CCTCGTAACCTTTGTTAGAA+AGG | 0.451936 | 7_4:+49885028 | None:intergenic |
| GATGTTGAGCATTGGTGAAA+AGG | 0.453224 | 7_4:+49885255 | None:intergenic |
| TGTTTCTTGGAGAAAGGTTG+GGG | 0.454574 | 7_4:-49883919 | Msa1160110:CDS |
| CCGAAATGAACAACAGCATC+AGG | 0.456856 | 7_4:+49884817 | None:intergenic |
| TAAGGTGTGTGCTTGGCTGC+TGG | 0.457236 | 7_4:-49883873 | Msa1160110:CDS |
| GCCTGGTGTTTCTTGGAGAA+AGG | 0.462195 | 7_4:-49883925 | Msa1160110:CDS |
| ACGAAAGCTGGCGAGAAGTT+GGG | 0.464218 | 7_4:-49884117 | Msa1160110:CDS |
| TGAATCAAGGAGTTGTATAT+GGG | 0.470159 | 7_4:-49884468 | Msa1160110:CDS |
| CTGGCGCGAGTAATGGTCAT+TGG | 0.471283 | 7_4:-49885087 | Msa1160110:CDS |
| TTCTACAATTTCAACTGGCC+AGG | 0.474476 | 7_4:-49885133 | Msa1160110:CDS |
| CTTGGGACAATGGGTGAATA+CGG | 0.477903 | 7_4:-49884661 | Msa1160110:CDS |
| TAGCGTTCTGGCGCGAGTAA+TGG | 0.482126 | 7_4:-49885094 | Msa1160110:CDS |
| CAGTGTTGGAAATCTCTCAC+TGG | 0.491751 | 7_4:-49884913 | Msa1160110:CDS |
| AACAACAGCATCAGGCTCAT+AGG | 0.494062 | 7_4:+49884825 | None:intergenic |
| TATTTGGAACTGCACTGAAT+CGG | 0.496413 | 7_4:-49884384 | Msa1160110:CDS |
| GCTGAACTTGTTACGAAAGC+TGG | 0.498584 | 7_4:-49884129 | Msa1160110:CDS |
| TGAACTCTCCAGGGTTAGCC+GGG | 0.498798 | 7_4:+49884196 | None:intergenic |
| CACAGCAAAACAATGTTGTC+GGG | 0.499040 | 7_4:-49884741 | Msa1160110:CDS |
| CACACCAATTTCCTCCATCC+AGG | 0.500313 | 7_4:-49884944 | Msa1160110:CDS |
| AACCTTTGTTAGAAAGGTGG+AGG | 0.503426 | 7_4:+49885034 | None:intergenic |
| CCAGAACGCTAGTTTGAACC+GGG | 0.503922 | 7_4:+49885106 | None:intergenic |
| AAGAAGTGTCGTAATTATGT+AGG | 0.506713 | 7_4:+49883839 | None:intergenic |
| ATTGTCATCTAGTCAAGCTT+GGG | 0.509144 | 7_4:-49884678 | Msa1160110:CDS |
| CCAAATATTGATATTGAGGA+AGG | 0.509151 | 7_4:-49884634 | Msa1160110:CDS |
| GACCGGTCTATCATAGAGTA+AGG | 0.509269 | 7_4:+49884778 | None:intergenic |
| AACTCCAAATATTGATATTG+AGG | 0.510539 | 7_4:-49884638 | Msa1160110:CDS |
| GTAATGGTCATTGGTGGAGA+TGG | 0.511804 | 7_4:-49885078 | Msa1160110:CDS |
| TCTAGTCAAGCTTGGGACAA+TGG | 0.511865 | 7_4:-49884671 | Msa1160110:CDS |
| TCTAACTCCACTCTTGGATT+AGG | 0.511903 | 7_4:+49884069 | None:intergenic |
| GATTGTCATCTAGTCAAGCT+TGG | 0.511909 | 7_4:-49884679 | Msa1160110:CDS |
| TGAGCTTGCCATTGCAAACC+CGG | 0.515121 | 7_4:-49884214 | Msa1160110:CDS |
| ATAATTTGCTTTGTATTGAA+CGG | 0.520738 | 7_4:+49883948 | None:intergenic |
| CTCCTTACTCTATGATAGAC+CGG | 0.525170 | 7_4:-49884780 | Msa1160110:CDS |
| ATTGCAAACCCGGCTAACCC+TGG | 0.532722 | 7_4:-49884204 | Msa1160110:CDS |
| GTGTATACACAGCTCTTGAC+CGG | 0.533184 | 7_4:+49884761 | None:intergenic |
| AATACAAAGCAAATTATGCC+TGG | 0.535104 | 7_4:-49883942 | Msa1160110:CDS |
| ACACAGCAAAACAATGTTGT+CGG | 0.535211 | 7_4:-49884742 | Msa1160110:CDS |
| CGGGCAACTGATCTGAATCA+AGG | 0.540528 | 7_4:-49884481 | Msa1160110:CDS |
| TGGAGATGGATACTGTGGTT+GGG | 0.542951 | 7_4:-49885064 | Msa1160110:CDS |
| AGCAGCCAAGCACACACCTT+AGG | 0.544690 | 7_4:+49883875 | None:intergenic |
| TAAACAAGGTTTGTTTGAAG+CGG | 0.550343 | 7_4:+49885281 | None:intergenic |
| GCTTTCACTTGCAAAGCTTG+GGG | 0.550528 | 7_4:-49884508 | Msa1160110:CDS |
| ACTCCAAAACTCCATTTAGA+CGG | 0.553484 | 7_4:-49885206 | Msa1160110:CDS |
| TTCAACTGGCCAGGAAACCC+CGG | 0.558412 | 7_4:-49885124 | Msa1160110:CDS |
| GTGGAGATGGATACTGTGGT+TGG | 0.563462 | 7_4:-49885065 | Msa1160110:CDS |
| ACACTGAATGCGATCCTGGA+TGG | 0.563966 | 7_4:+49884930 | None:intergenic |
| TCCAGGATCGCATTCAGTGT+TGG | 0.567073 | 7_4:-49884927 | Msa1160110:CDS |
| TGTCCTTCCGTTGTGAGTGA+TGG | 0.571830 | 7_4:+49884603 | None:intergenic |
| AGGGTTAGCCGGGTTTGCAA+TGG | 0.573221 | 7_4:+49884206 | None:intergenic |
| TGATGCTGTTGTTCATTTCG+GGG | 0.574935 | 7_4:-49884815 | Msa1160110:CDS |
| CGTAACCTTTGTTAGAAAGG+TGG | 0.578750 | 7_4:+49885031 | None:intergenic |
| AGAGAATCTGAAAGAAAGTG+TGG | 0.580043 | 7_4:+49883994 | None:intergenic |
| AAAAGTATTGAGCTATACAT+TGG | 0.580925 | 7_4:-49884889 | Msa1160110:CDS |
| TAGAAAATGATGTTGAGCAT+TGG | 0.583068 | 7_4:+49885247 | None:intergenic |
| AGTGTTGGAAATCTCTCACT+GGG | 0.586597 | 7_4:-49884912 | Msa1160110:CDS |
| CCTTTCTAACAAAGGTTACG+AGG | 0.587127 | 7_4:-49885028 | Msa1160110:CDS |
| CCTTTACCATATACAGTGAG+TGG | 0.594076 | 7_4:+49884334 | None:intergenic |
| GTTTGAAGCGGAGAAAGTCA+AGG | 0.597796 | 7_4:+49885293 | None:intergenic |
| CTTTCACTTGCAAAGCTTGG+GGG | 0.598323 | 7_4:-49884507 | Msa1160110:CDS |
| TGAGAGAATCTAGTCCAAGC+TGG | 0.600491 | 7_4:+49884965 | None:intergenic |
| GCCCTCCACCTTTCTAACAA+AGG | 0.602875 | 7_4:-49885036 | Msa1160110:CDS |
| ACCTTTGTTAGAAAGGTGGA+GGG | 0.612052 | 7_4:+49885035 | None:intergenic |
| TCGAACAAGGTTGTCAACAA+TGG | 0.614328 | 7_4:+49885002 | None:intergenic |
| TGAAGACTCTGAACTCTCCA+GGG | 0.617358 | 7_4:+49884187 | None:intergenic |
| TTACCATCACTCACAACGGA+AGG | 0.617927 | 7_4:-49884606 | Msa1160110:CDS |
| CTGAATGCGATCCTGGATGG+AGG | 0.618262 | 7_4:+49884933 | None:intergenic |
| ATCTGTGCCTAATCCAAGAG+TGG | 0.624094 | 7_4:-49884076 | Msa1160110:CDS |
| TCTTGCGAGAACAGAAACCA+AGG | 0.641034 | 7_4:-49885179 | Msa1160110:CDS |
| ACCTTTCTCCAAGAAACACC+AGG | 0.645278 | 7_4:+49883924 | None:intergenic |
| GAATCAAGGAGTTGTATATG+GGG | 0.667804 | 7_4:-49884467 | Msa1160110:CDS |
| ATTGGTGGAGATGGATACTG+TGG | 0.674313 | 7_4:-49885069 | Msa1160110:CDS |
| TATATTACCATCACTCACAA+CGG | 0.680492 | 7_4:-49884610 | Msa1160110:CDS |
| TGCTATAAAAGAGTACAGAG+AGG | 0.711022 | 7_4:-49884701 | Msa1160110:CDS |
| CAGAACGCTAGTTTGAACCG+GGG | 0.712623 | 7_4:+49885107 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTGCTTTGTATTGAA+CGG | + | chr7_4:49885207-49885226 | None:intergenic | 20.0% |
| !!! | ATAATTTGCTTTGTATTGAA+CGG | + | chr7_4:49885207-49885226 | None:intergenic | 20.0% |
| !!! | AAAAGTATTGAGCTATACAT+TGG | - | chr7_4:49884263-49884282 | Msa1160110:intron | 25.0% |
| ! | AACTCCAAATATTGATATTG+AGG | - | chr7_4:49884514-49884533 | Msa1160110:CDS | 25.0% |
| !! | CTCATTTTATCATTTAAGCA+AGG | - | chr7_4:49884601-49884620 | Msa1160110:CDS | 25.0% |
| ! | TTTGACTATGATGCAATATT+TGG | - | chr7_4:49884752-49884771 | Msa1160110:CDS | 25.0% |
| !!! | AAAAGTATTGAGCTATACAT+TGG | - | chr7_4:49884263-49884282 | Msa1160110:intron | 25.0% |
| ! | AACTCCAAATATTGATATTG+AGG | - | chr7_4:49884514-49884533 | Msa1160110:CDS | 25.0% |
| !! | CTCATTTTATCATTTAAGCA+AGG | - | chr7_4:49884601-49884620 | Msa1160110:CDS | 25.0% |
| ! | TTTGACTATGATGCAATATT+TGG | - | chr7_4:49884752-49884771 | Msa1160110:CDS | 25.0% |
| ! | TAAACAAGGTTTGTTTGAAG+CGG | + | chr7_4:49883874-49883893 | None:intergenic | 30.0% |
| !!! | TGGTGAAAAGGTTTTAAACA+AGG | + | chr7_4:49883888-49883907 | None:intergenic | 30.0% |
| TAGAAAATGATGTTGAGCAT+TGG | + | chr7_4:49883908-49883927 | None:intergenic | 30.0% | |
| ! | CTCAACATCATTTTCTAACA+CGG | - | chr7_4:49883911-49883930 | Msa1160110:CDS | 30.0% |
| AATGCTTCTACAATTTCAAC+TGG | - | chr7_4:49884014-49884033 | Msa1160110:CDS | 30.0% | |
| CCTTCCTCAATATCAATATT+TGG | + | chr7_4:49884521-49884540 | None:intergenic | 30.0% | |
| CCAAATATTGATATTGAGGA+AGG | - | chr7_4:49884518-49884537 | Msa1160110:CDS | 30.0% | |
| TATATTACCATCACTCACAA+CGG | - | chr7_4:49884542-49884561 | Msa1160110:CDS | 30.0% | |
| TGAATCAAGGAGTTGTATAT+GGG | - | chr7_4:49884684-49884703 | Msa1160110:CDS | 30.0% | |
| CAAATATTGCAAATATTGCC+TGG | + | chr7_4:49884847-49884866 | None:intergenic | 30.0% | |
| TGATTCACATGTTTCAAACT+AGG | - | chr7_4:49884880-49884899 | Msa1160110:CDS | 30.0% | |
| GATTCACATGTTTCAAACTA+GGG | - | chr7_4:49884881-49884900 | Msa1160110:CDS | 30.0% | |
| AACACTAAACTAGTTGATCT+TGG | - | chr7_4:49885128-49885147 | Msa1160110:CDS | 30.0% | |
| AATACAAAGCAAATTATGCC+TGG | - | chr7_4:49885210-49885229 | Msa1160110:CDS | 30.0% | |
| ACAAAAACTCTTTCATCCTA+AGG | - | chr7_4:49885261-49885280 | Msa1160110:CDS | 30.0% | |
| !! | AAGAAGTGTCGTAATTATGT+AGG | + | chr7_4:49885316-49885335 | None:intergenic | 30.0% |
| ! | TAAACAAGGTTTGTTTGAAG+CGG | + | chr7_4:49883874-49883893 | None:intergenic | 30.0% |
| !!! | TGGTGAAAAGGTTTTAAACA+AGG | + | chr7_4:49883888-49883907 | None:intergenic | 30.0% |
| TAGAAAATGATGTTGAGCAT+TGG | + | chr7_4:49883908-49883927 | None:intergenic | 30.0% | |
| ! | CTCAACATCATTTTCTAACA+CGG | - | chr7_4:49883911-49883930 | Msa1160110:CDS | 30.0% |
| AATGCTTCTACAATTTCAAC+TGG | - | chr7_4:49884014-49884033 | Msa1160110:CDS | 30.0% | |
| CCTTCCTCAATATCAATATT+TGG | + | chr7_4:49884521-49884540 | None:intergenic | 30.0% | |
| CCAAATATTGATATTGAGGA+AGG | - | chr7_4:49884518-49884537 | Msa1160110:CDS | 30.0% | |
| TATATTACCATCACTCACAA+CGG | - | chr7_4:49884542-49884561 | Msa1160110:CDS | 30.0% | |
| TGAATCAAGGAGTTGTATAT+GGG | - | chr7_4:49884684-49884703 | Msa1160110:CDS | 30.0% | |
| CAAATATTGCAAATATTGCC+TGG | + | chr7_4:49884847-49884866 | None:intergenic | 30.0% | |
| TGATTCACATGTTTCAAACT+AGG | - | chr7_4:49884880-49884899 | Msa1160110:CDS | 30.0% | |
| GATTCACATGTTTCAAACTA+GGG | - | chr7_4:49884881-49884900 | Msa1160110:CDS | 30.0% | |
| AACACTAAACTAGTTGATCT+TGG | - | chr7_4:49885128-49885147 | Msa1160110:CDS | 30.0% | |
| AATACAAAGCAAATTATGCC+TGG | - | chr7_4:49885210-49885229 | Msa1160110:CDS | 30.0% | |
| ACAAAAACTCTTTCATCCTA+AGG | - | chr7_4:49885261-49885280 | Msa1160110:CDS | 30.0% | |
| !! | AAGAAGTGTCGTAATTATGT+AGG | + | chr7_4:49885316-49885335 | None:intergenic | 30.0% |
| ACTCCAAAACTCCATTTAGA+CGG | - | chr7_4:49883946-49883965 | Msa1160110:CDS | 35.0% | |
| ! | ACAACTGCAAAACTTTTCCT+TGG | + | chr7_4:49883993-49884012 | None:intergenic | 35.0% |
| ACACAGCAAAACAATGTTGT+CGG | - | chr7_4:49884410-49884429 | Msa1160110:CDS | 35.0% | |
| ! | TGCTATAAAAGAGTACAGAG+AGG | - | chr7_4:49884451-49884470 | Msa1160110:CDS | 35.0% |
| ATTGTCATCTAGTCAAGCTT+GGG | - | chr7_4:49884474-49884493 | Msa1160110:CDS | 35.0% | |
| !! | TAAAATGAGCTAGCTTGCTT+TGG | + | chr7_4:49884590-49884609 | None:intergenic | 35.0% |
| GCAAGTGAAAGCTATGTTAT+GGG | + | chr7_4:49884636-49884655 | None:intergenic | 35.0% | |
| TGCAAGTGAAAGCTATGTTA+TGG | + | chr7_4:49884637-49884656 | None:intergenic | 35.0% | |
| CTGAATCAAGGAGTTGTATA+TGG | - | chr7_4:49884683-49884702 | Msa1160110:CDS | 35.0% | |
| GAATCAAGGAGTTGTATATG+GGG | - | chr7_4:49884685-49884704 | Msa1160110:CDS | 35.0% | |
| ! | TATTTGGAACTGCACTGAAT+CGG | - | chr7_4:49884768-49884787 | Msa1160110:CDS | 35.0% |
| TGTATCTCTTATGTCAAGGA+AGG | + | chr7_4:49884907-49884926 | None:intergenic | 35.0% | |
| GAACTGTATCTCTTATGTCA+AGG | + | chr7_4:49884911-49884930 | None:intergenic | 35.0% | |
| ! | CAGATATGGTTTTCACATCA+AGG | + | chr7_4:49885061-49885080 | None:intergenic | 35.0% |
| AGAGAATCTGAAAGAAAGTG+TGG | + | chr7_4:49885161-49885180 | None:intergenic | 35.0% | |
| AAATTATGCCTGGTGTTTCT+TGG | - | chr7_4:49885220-49885239 | Msa1160110:CDS | 35.0% | |
| ACTCCAAAACTCCATTTAGA+CGG | - | chr7_4:49883946-49883965 | Msa1160110:CDS | 35.0% | |
| ! | ACAACTGCAAAACTTTTCCT+TGG | + | chr7_4:49883993-49884012 | None:intergenic | 35.0% |
| ACACAGCAAAACAATGTTGT+CGG | - | chr7_4:49884410-49884429 | Msa1160110:CDS | 35.0% | |
| ! | TGCTATAAAAGAGTACAGAG+AGG | - | chr7_4:49884451-49884470 | Msa1160110:CDS | 35.0% |
| ATTGTCATCTAGTCAAGCTT+GGG | - | chr7_4:49884474-49884493 | Msa1160110:CDS | 35.0% | |
| !! | TAAAATGAGCTAGCTTGCTT+TGG | + | chr7_4:49884590-49884609 | None:intergenic | 35.0% |
| GCAAGTGAAAGCTATGTTAT+GGG | + | chr7_4:49884636-49884655 | None:intergenic | 35.0% | |
| TGCAAGTGAAAGCTATGTTA+TGG | + | chr7_4:49884637-49884656 | None:intergenic | 35.0% | |
| CTGAATCAAGGAGTTGTATA+TGG | - | chr7_4:49884683-49884702 | Msa1160110:CDS | 35.0% | |
| GAATCAAGGAGTTGTATATG+GGG | - | chr7_4:49884685-49884704 | Msa1160110:CDS | 35.0% | |
| ! | TATTTGGAACTGCACTGAAT+CGG | - | chr7_4:49884768-49884787 | Msa1160110:CDS | 35.0% |
| TGTATCTCTTATGTCAAGGA+AGG | + | chr7_4:49884907-49884926 | None:intergenic | 35.0% | |
| GAACTGTATCTCTTATGTCA+AGG | + | chr7_4:49884911-49884930 | None:intergenic | 35.0% | |
| ! | CAGATATGGTTTTCACATCA+AGG | + | chr7_4:49885061-49885080 | None:intergenic | 35.0% |
| AGAGAATCTGAAAGAAAGTG+TGG | + | chr7_4:49885161-49885180 | None:intergenic | 35.0% | |
| AAATTATGCCTGGTGTTTCT+TGG | - | chr7_4:49885220-49885239 | Msa1160110:CDS | 35.0% | |
| !! | GATGTTGAGCATTGGTGAAA+AGG | + | chr7_4:49883900-49883919 | None:intergenic | 40.0% |
| ! | AAGCCGTCTAAATGGAGTTT+TGG | + | chr7_4:49883952-49883971 | None:intergenic | 40.0% |
| TTCTACAATTTCAACTGGCC+AGG | - | chr7_4:49884019-49884038 | Msa1160110:CDS | 40.0% | |
| ACCTTTGTTAGAAAGGTGGA+GGG | + | chr7_4:49884120-49884139 | None:intergenic | 40.0% | |
| AACCTTTGTTAGAAAGGTGG+AGG | + | chr7_4:49884121-49884140 | None:intergenic | 40.0% | |
| CGTAACCTTTGTTAGAAAGG+TGG | + | chr7_4:49884124-49884143 | None:intergenic | 40.0% | |
| CCTCGTAACCTTTGTTAGAA+AGG | + | chr7_4:49884127-49884146 | None:intergenic | 40.0% | |
| CCTTTCTAACAAAGGTTACG+AGG | - | chr7_4:49884124-49884143 | Msa1160110:CDS | 40.0% | |
| TCGAACAAGGTTGTCAACAA+TGG | + | chr7_4:49884153-49884172 | None:intergenic | 40.0% | |
| GATCAAAAAGACGTCGAACA+AGG | + | chr7_4:49884166-49884185 | None:intergenic | 40.0% | |
| ! | AGTGTTGGAAATCTCTCACT+GGG | - | chr7_4:49884240-49884259 | Msa1160110:intron | 40.0% |
| CTCATAGGACTTGAAGGTTT+CGG | + | chr7_4:49884315-49884334 | None:intergenic | 40.0% | |
| CCTGATGCTGTTGTTCATTT+CGG | - | chr7_4:49884335-49884354 | Msa1160110:intron | 40.0% | |
| CTGATGCTGTTGTTCATTTC+GGG | - | chr7_4:49884336-49884355 | Msa1160110:intron | 40.0% | |
| TGATGCTGTTGTTCATTTCG+GGG | - | chr7_4:49884337-49884356 | Msa1160110:intron | 40.0% | |
| CTCCTTACTCTATGATAGAC+CGG | - | chr7_4:49884372-49884391 | Msa1160110:CDS | 40.0% | |
| CACAGCAAAACAATGTTGTC+GGG | - | chr7_4:49884411-49884430 | Msa1160110:CDS | 40.0% | |
| GATTGTCATCTAGTCAAGCT+TGG | - | chr7_4:49884473-49884492 | Msa1160110:CDS | 40.0% | |
| TAGCTTTCACTTGCAAAGCT+TGG | - | chr7_4:49884642-49884661 | Msa1160110:CDS | 40.0% | |
| AGCTTTCACTTGCAAAGCTT+GGG | - | chr7_4:49884643-49884662 | Msa1160110:CDS | 40.0% | |
| TGCATGAAGAGTTGTGTAAC+AGG | - | chr7_4:49884729-49884748 | Msa1160110:CDS | 40.0% | |
| CCTTTACCATATACAGTGAG+TGG | + | chr7_4:49884821-49884840 | None:intergenic | 40.0% | |
| CCACTCACTGTATATGGTAA+AGG | - | chr7_4:49884818-49884837 | Msa1160110:CDS | 40.0% | |
| CTCACTGTATATGGTAAAGG+AGG | - | chr7_4:49884821-49884840 | Msa1160110:CDS | 40.0% | |
| ! | TCTTGGATTAGGCACAGATA+TGG | + | chr7_4:49885075-49885094 | None:intergenic | 40.0% |
| TCTAACTCCACTCTTGGATT+AGG | + | chr7_4:49885086-49885105 | None:intergenic | 40.0% | |
| TAATCCAAGAGTGGAGTTAG+AGG | - | chr7_4:49885085-49885104 | Msa1160110:CDS | 40.0% | |
| GTGTTTCTTGGAGAAAGGTT+GGG | - | chr7_4:49885232-49885251 | Msa1160110:CDS | 40.0% | |
| TGTTTCTTGGAGAAAGGTTG+GGG | - | chr7_4:49885233-49885252 | Msa1160110:CDS | 40.0% | |
| !! | GATGTTGAGCATTGGTGAAA+AGG | + | chr7_4:49883900-49883919 | None:intergenic | 40.0% |
| ! | AAGCCGTCTAAATGGAGTTT+TGG | + | chr7_4:49883952-49883971 | None:intergenic | 40.0% |
| TTCTACAATTTCAACTGGCC+AGG | - | chr7_4:49884019-49884038 | Msa1160110:CDS | 40.0% | |
| ACCTTTGTTAGAAAGGTGGA+GGG | + | chr7_4:49884120-49884139 | None:intergenic | 40.0% | |
| AACCTTTGTTAGAAAGGTGG+AGG | + | chr7_4:49884121-49884140 | None:intergenic | 40.0% | |
| CGTAACCTTTGTTAGAAAGG+TGG | + | chr7_4:49884124-49884143 | None:intergenic | 40.0% | |
| CCTCGTAACCTTTGTTAGAA+AGG | + | chr7_4:49884127-49884146 | None:intergenic | 40.0% | |
| CCTTTCTAACAAAGGTTACG+AGG | - | chr7_4:49884124-49884143 | Msa1160110:CDS | 40.0% | |
| TCGAACAAGGTTGTCAACAA+TGG | + | chr7_4:49884153-49884172 | None:intergenic | 40.0% | |
| GATCAAAAAGACGTCGAACA+AGG | + | chr7_4:49884166-49884185 | None:intergenic | 40.0% | |
| ! | AGTGTTGGAAATCTCTCACT+GGG | - | chr7_4:49884240-49884259 | Msa1160110:intron | 40.0% |
| CTCATAGGACTTGAAGGTTT+CGG | + | chr7_4:49884315-49884334 | None:intergenic | 40.0% | |
| CCTGATGCTGTTGTTCATTT+CGG | - | chr7_4:49884335-49884354 | Msa1160110:intron | 40.0% | |
| CTGATGCTGTTGTTCATTTC+GGG | - | chr7_4:49884336-49884355 | Msa1160110:intron | 40.0% | |
| TGATGCTGTTGTTCATTTCG+GGG | - | chr7_4:49884337-49884356 | Msa1160110:intron | 40.0% | |
| CTCCTTACTCTATGATAGAC+CGG | - | chr7_4:49884372-49884391 | Msa1160110:CDS | 40.0% | |
| CACAGCAAAACAATGTTGTC+GGG | - | chr7_4:49884411-49884430 | Msa1160110:CDS | 40.0% | |
| GATTGTCATCTAGTCAAGCT+TGG | - | chr7_4:49884473-49884492 | Msa1160110:CDS | 40.0% | |
| TAGCTTTCACTTGCAAAGCT+TGG | - | chr7_4:49884642-49884661 | Msa1160110:CDS | 40.0% | |
| AGCTTTCACTTGCAAAGCTT+GGG | - | chr7_4:49884643-49884662 | Msa1160110:CDS | 40.0% | |
| TGCATGAAGAGTTGTGTAAC+AGG | - | chr7_4:49884729-49884748 | Msa1160110:CDS | 40.0% | |
| CCTTTACCATATACAGTGAG+TGG | + | chr7_4:49884821-49884840 | None:intergenic | 40.0% | |
| CCACTCACTGTATATGGTAA+AGG | - | chr7_4:49884818-49884837 | Msa1160110:CDS | 40.0% | |
| CTCACTGTATATGGTAAAGG+AGG | - | chr7_4:49884821-49884840 | Msa1160110:CDS | 40.0% | |
| ! | TCTTGGATTAGGCACAGATA+TGG | + | chr7_4:49885075-49885094 | None:intergenic | 40.0% |
| TCTAACTCCACTCTTGGATT+AGG | + | chr7_4:49885086-49885105 | None:intergenic | 40.0% | |
| TAATCCAAGAGTGGAGTTAG+AGG | - | chr7_4:49885085-49885104 | Msa1160110:CDS | 40.0% | |
| GTGTTTCTTGGAGAAAGGTT+GGG | - | chr7_4:49885232-49885251 | Msa1160110:CDS | 40.0% | |
| TGTTTCTTGGAGAAAGGTTG+GGG | - | chr7_4:49885233-49885252 | Msa1160110:CDS | 40.0% | |
| ! | GTTTGAAGCGGAGAAAGTCA+AGG | + | chr7_4:49883862-49883881 | None:intergenic | 45.0% |
| CGCAAGAAAAGCCGTCTAAA+TGG | + | chr7_4:49883960-49883979 | None:intergenic | 45.0% | |
| TCTTGCGAGAACAGAAACCA+AGG | - | chr7_4:49883973-49883992 | Msa1160110:CDS | 45.0% | |
| GTAATGGTCATTGGTGGAGA+TGG | - | chr7_4:49884074-49884093 | Msa1160110:CDS | 45.0% | |
| ATTGGTGGAGATGGATACTG+TGG | - | chr7_4:49884083-49884102 | Msa1160110:CDS | 45.0% | |
| TGGAGATGGATACTGTGGTT+GGG | - | chr7_4:49884088-49884107 | Msa1160110:CDS | 45.0% | |
| ! | CGTCTTTTTGATCACCAGCT+TGG | - | chr7_4:49884173-49884192 | Msa1160110:CDS | 45.0% |
| TGAGAGAATCTAGTCCAAGC+TGG | + | chr7_4:49884190-49884209 | None:intergenic | 45.0% | |
| ! | CAGTGTTGGAAATCTCTCAC+TGG | - | chr7_4:49884239-49884258 | Msa1160110:intron | 45.0% |
| ATCAGGCTCATAGGACTTGA+AGG | + | chr7_4:49884321-49884340 | None:intergenic | 45.0% | |
| AACAACAGCATCAGGCTCAT+AGG | + | chr7_4:49884330-49884349 | None:intergenic | 45.0% | |
| CCGAAATGAACAACAGCATC+AGG | + | chr7_4:49884338-49884357 | None:intergenic | 45.0% | |
| GACCGGTCTATCATAGAGTA+AGG | + | chr7_4:49884377-49884396 | None:intergenic | 45.0% | |
| GTGTATACACAGCTCTTGAC+CGG | + | chr7_4:49884394-49884413 | None:intergenic | 45.0% | |
| TCTAGTCAAGCTTGGGACAA+TGG | - | chr7_4:49884481-49884500 | Msa1160110:CDS | 45.0% | |
| CTAGTCAAGCTTGGGACAAT+GGG | - | chr7_4:49884482-49884501 | Msa1160110:CDS | 45.0% | |
| CTTGGGACAATGGGTGAATA+CGG | - | chr7_4:49884491-49884510 | Msa1160110:CDS | 45.0% | |
| TTACCATCACTCACAACGGA+AGG | - | chr7_4:49884546-49884565 | Msa1160110:CDS | 45.0% | |
| !! | GAGCTAGCTTGCTTTGGATA+TGG | + | chr7_4:49884584-49884603 | None:intergenic | 45.0% |
| GCTTTCACTTGCAAAGCTTG+GGG | - | chr7_4:49884644-49884663 | Msa1160110:CDS | 45.0% | |
| CTTTCACTTGCAAAGCTTGG+GGG | - | chr7_4:49884645-49884664 | Msa1160110:CDS | 45.0% | |
| ! | ACTGAATCGGTTCTGTGTTC+AGG | - | chr7_4:49884781-49884800 | Msa1160110:CDS | 45.0% |
| GGTCATCCACTCACTGTATA+TGG | - | chr7_4:49884812-49884831 | Msa1160110:CDS | 45.0% | |
| TGTATATGGTAAAGGAGGCC+AGG | - | chr7_4:49884826-49884845 | Msa1160110:CDS | 45.0% | |
| TGAAGACTCTGAACTCTCCA+GGG | + | chr7_4:49884968-49884987 | None:intergenic | 45.0% | |
| TTGAAGACTCTGAACTCTCC+AGG | + | chr7_4:49884969-49884988 | None:intergenic | 45.0% | |
| !! | GCTGAACTTGTTACGAAAGC+TGG | - | chr7_4:49885023-49885042 | Msa1160110:CDS | 45.0% |
| ATCTGTGCCTAATCCAAGAG+TGG | - | chr7_4:49885076-49885095 | Msa1160110:CDS | 45.0% | |
| ACCTTTCTCCAAGAAACACC+AGG | + | chr7_4:49885231-49885250 | None:intergenic | 45.0% | |
| GGTGTTTCTTGGAGAAAGGT+TGG | - | chr7_4:49885231-49885250 | Msa1160110:CDS | 45.0% | |
| TTCATCCTAAGGTGTGTGCT+TGG | - | chr7_4:49885272-49885291 | Msa1160110:CDS | 45.0% | |
| ! | GTTTGAAGCGGAGAAAGTCA+AGG | + | chr7_4:49883862-49883881 | None:intergenic | 45.0% |
| CGCAAGAAAAGCCGTCTAAA+TGG | + | chr7_4:49883960-49883979 | None:intergenic | 45.0% | |
| TCTTGCGAGAACAGAAACCA+AGG | - | chr7_4:49883973-49883992 | Msa1160110:CDS | 45.0% | |
| GTAATGGTCATTGGTGGAGA+TGG | - | chr7_4:49884074-49884093 | Msa1160110:CDS | 45.0% | |
| ATTGGTGGAGATGGATACTG+TGG | - | chr7_4:49884083-49884102 | Msa1160110:CDS | 45.0% | |
| TGGAGATGGATACTGTGGTT+GGG | - | chr7_4:49884088-49884107 | Msa1160110:CDS | 45.0% | |
| ! | CGTCTTTTTGATCACCAGCT+TGG | - | chr7_4:49884173-49884192 | Msa1160110:CDS | 45.0% |
| TGAGAGAATCTAGTCCAAGC+TGG | + | chr7_4:49884190-49884209 | None:intergenic | 45.0% | |
| ! | CAGTGTTGGAAATCTCTCAC+TGG | - | chr7_4:49884239-49884258 | Msa1160110:intron | 45.0% |
| ATCAGGCTCATAGGACTTGA+AGG | + | chr7_4:49884321-49884340 | None:intergenic | 45.0% | |
| AACAACAGCATCAGGCTCAT+AGG | + | chr7_4:49884330-49884349 | None:intergenic | 45.0% | |
| CCGAAATGAACAACAGCATC+AGG | + | chr7_4:49884338-49884357 | None:intergenic | 45.0% | |
| GACCGGTCTATCATAGAGTA+AGG | + | chr7_4:49884377-49884396 | None:intergenic | 45.0% | |
| GTGTATACACAGCTCTTGAC+CGG | + | chr7_4:49884394-49884413 | None:intergenic | 45.0% | |
| TCTAGTCAAGCTTGGGACAA+TGG | - | chr7_4:49884481-49884500 | Msa1160110:CDS | 45.0% | |
| CTAGTCAAGCTTGGGACAAT+GGG | - | chr7_4:49884482-49884501 | Msa1160110:CDS | 45.0% | |
| CTTGGGACAATGGGTGAATA+CGG | - | chr7_4:49884491-49884510 | Msa1160110:CDS | 45.0% | |
| TTACCATCACTCACAACGGA+AGG | - | chr7_4:49884546-49884565 | Msa1160110:CDS | 45.0% | |
| !! | GAGCTAGCTTGCTTTGGATA+TGG | + | chr7_4:49884584-49884603 | None:intergenic | 45.0% |
| GCTTTCACTTGCAAAGCTTG+GGG | - | chr7_4:49884644-49884663 | Msa1160110:CDS | 45.0% | |
| CTTTCACTTGCAAAGCTTGG+GGG | - | chr7_4:49884645-49884664 | Msa1160110:CDS | 45.0% | |
| ! | ACTGAATCGGTTCTGTGTTC+AGG | - | chr7_4:49884781-49884800 | Msa1160110:CDS | 45.0% |
| GGTCATCCACTCACTGTATA+TGG | - | chr7_4:49884812-49884831 | Msa1160110:CDS | 45.0% | |
| TGTATATGGTAAAGGAGGCC+AGG | - | chr7_4:49884826-49884845 | Msa1160110:CDS | 45.0% | |
| TGAAGACTCTGAACTCTCCA+GGG | + | chr7_4:49884968-49884987 | None:intergenic | 45.0% | |
| TTGAAGACTCTGAACTCTCC+AGG | + | chr7_4:49884969-49884988 | None:intergenic | 45.0% | |
| !! | GCTGAACTTGTTACGAAAGC+TGG | - | chr7_4:49885023-49885042 | Msa1160110:CDS | 45.0% |
| ATCTGTGCCTAATCCAAGAG+TGG | - | chr7_4:49885076-49885095 | Msa1160110:CDS | 45.0% | |
| ACCTTTCTCCAAGAAACACC+AGG | + | chr7_4:49885231-49885250 | None:intergenic | 45.0% | |
| GGTGTTTCTTGGAGAAAGGT+TGG | - | chr7_4:49885231-49885250 | Msa1160110:CDS | 45.0% | |
| TTCATCCTAAGGTGTGTGCT+TGG | - | chr7_4:49885272-49885291 | Msa1160110:CDS | 45.0% | |
| TAGTTTGAACCGGGGTTTCC+TGG | + | chr7_4:49884040-49884059 | None:intergenic | 50.0% | |
| ! | CAGAACGCTAGTTTGAACCG+GGG | + | chr7_4:49884048-49884067 | None:intergenic | 50.0% |
| ! | CCAGAACGCTAGTTTGAACC+GGG | + | chr7_4:49884049-49884068 | None:intergenic | 50.0% |
| ! | GCCAGAACGCTAGTTTGAAC+CGG | + | chr7_4:49884050-49884069 | None:intergenic | 50.0% |
| GTGGAGATGGATACTGTGGT+TGG | - | chr7_4:49884087-49884106 | Msa1160110:CDS | 50.0% | |
| GCCCTCCACCTTTCTAACAA+AGG | - | chr7_4:49884116-49884135 | Msa1160110:CDS | 50.0% | |
| CACACCAATTTCCTCCATCC+AGG | - | chr7_4:49884208-49884227 | Msa1160110:CDS | 50.0% | |
| CGATCCTGGATGGAGGAAAT+TGG | + | chr7_4:49884215-49884234 | None:intergenic | 50.0% | |
| ACACTGAATGCGATCCTGGA+TGG | + | chr7_4:49884225-49884244 | None:intergenic | 50.0% | |
| TCCAGGATCGCATTCAGTGT+TGG | - | chr7_4:49884225-49884244 | Msa1160110:CDS | 50.0% | |
| TCCAACACTGAATGCGATCC+TGG | + | chr7_4:49884229-49884248 | None:intergenic | 50.0% | |
| TGTCCTTCCGTTGTGAGTGA+TGG | + | chr7_4:49884552-49884571 | None:intergenic | 50.0% | |
| CTTGCAAAGCTTGGGGGATT+CGG | - | chr7_4:49884651-49884670 | Msa1160110:CDS | 50.0% | |
| TTGCAAAGCTTGGGGGATTC+GGG | - | chr7_4:49884652-49884671 | Msa1160110:CDS | 50.0% | |
| CGGGCAACTGATCTGAATCA+AGG | - | chr7_4:49884671-49884690 | Msa1160110:CDS | 50.0% | |
| TTCTGTGTTCAGGCTGCTGT+TGG | - | chr7_4:49884791-49884810 | Msa1160110:CDS | 50.0% | |
| TGAGCTTGCCATTGCAAACC+CGG | - | chr7_4:49884938-49884957 | Msa1160110:CDS | 50.0% | |
| TACGAAAGCTGGCGAGAAGT+TGG | - | chr7_4:49885034-49885053 | Msa1160110:CDS | 50.0% | |
| ACGAAAGCTGGCGAGAAGTT+GGG | - | chr7_4:49885035-49885054 | Msa1160110:CDS | 50.0% | |
| TGCTCCTCTAACTCCACTCT+TGG | + | chr7_4:49885092-49885111 | None:intergenic | 50.0% | |
| GCCTGGTGTTTCTTGGAGAA+AGG | - | chr7_4:49885227-49885246 | Msa1160110:CDS | 50.0% | |
| TAGTTTGAACCGGGGTTTCC+TGG | + | chr7_4:49884040-49884059 | None:intergenic | 50.0% | |
| ! | CAGAACGCTAGTTTGAACCG+GGG | + | chr7_4:49884048-49884067 | None:intergenic | 50.0% |
| ! | CCAGAACGCTAGTTTGAACC+GGG | + | chr7_4:49884049-49884068 | None:intergenic | 50.0% |
| ! | GCCAGAACGCTAGTTTGAAC+CGG | + | chr7_4:49884050-49884069 | None:intergenic | 50.0% |
| GTGGAGATGGATACTGTGGT+TGG | - | chr7_4:49884087-49884106 | Msa1160110:CDS | 50.0% | |
| GCCCTCCACCTTTCTAACAA+AGG | - | chr7_4:49884116-49884135 | Msa1160110:CDS | 50.0% | |
| CACACCAATTTCCTCCATCC+AGG | - | chr7_4:49884208-49884227 | Msa1160110:CDS | 50.0% | |
| CGATCCTGGATGGAGGAAAT+TGG | + | chr7_4:49884215-49884234 | None:intergenic | 50.0% | |
| ACACTGAATGCGATCCTGGA+TGG | + | chr7_4:49884225-49884244 | None:intergenic | 50.0% | |
| TCCAGGATCGCATTCAGTGT+TGG | - | chr7_4:49884225-49884244 | Msa1160110:CDS | 50.0% | |
| TCCAACACTGAATGCGATCC+TGG | + | chr7_4:49884229-49884248 | None:intergenic | 50.0% | |
| TGTCCTTCCGTTGTGAGTGA+TGG | + | chr7_4:49884552-49884571 | None:intergenic | 50.0% | |
| CTTGCAAAGCTTGGGGGATT+CGG | - | chr7_4:49884651-49884670 | Msa1160110:CDS | 50.0% | |
| TTGCAAAGCTTGGGGGATTC+GGG | - | chr7_4:49884652-49884671 | Msa1160110:CDS | 50.0% | |
| CGGGCAACTGATCTGAATCA+AGG | - | chr7_4:49884671-49884690 | Msa1160110:CDS | 50.0% | |
| TTCTGTGTTCAGGCTGCTGT+TGG | - | chr7_4:49884791-49884810 | Msa1160110:CDS | 50.0% | |
| TGAGCTTGCCATTGCAAACC+CGG | - | chr7_4:49884938-49884957 | Msa1160110:CDS | 50.0% | |
| TACGAAAGCTGGCGAGAAGT+TGG | - | chr7_4:49885034-49885053 | Msa1160110:CDS | 50.0% | |
| ACGAAAGCTGGCGAGAAGTT+GGG | - | chr7_4:49885035-49885054 | Msa1160110:CDS | 50.0% | |
| TGCTCCTCTAACTCCACTCT+TGG | + | chr7_4:49885092-49885111 | None:intergenic | 50.0% | |
| GCCTGGTGTTTCTTGGAGAA+AGG | - | chr7_4:49885227-49885246 | Msa1160110:CDS | 50.0% | |
| TTCAACTGGCCAGGAAACCC+CGG | - | chr7_4:49884028-49884047 | Msa1160110:CDS | 55.0% | |
| CCCGGTTCAAACTAGCGTTC+TGG | - | chr7_4:49884046-49884065 | Msa1160110:CDS | 55.0% | |
| TAGCGTTCTGGCGCGAGTAA+TGG | - | chr7_4:49884058-49884077 | Msa1160110:CDS | 55.0% | |
| CTGGCGCGAGTAATGGTCAT+TGG | - | chr7_4:49884065-49884084 | Msa1160110:CDS | 55.0% | |
| GCGCGAGTAATGGTCATTGG+TGG | - | chr7_4:49884068-49884087 | Msa1160110:CDS | 55.0% | |
| CTGAATGCGATCCTGGATGG+AGG | + | chr7_4:49884222-49884241 | None:intergenic | 55.0% | |
| !! | AGGGTTAGCCGGGTTTGCAA+TGG | + | chr7_4:49884949-49884968 | None:intergenic | 55.0% |
| ATTGCAAACCCGGCTAACCC+TGG | - | chr7_4:49884948-49884967 | Msa1160110:CDS | 55.0% | |
| !! | TGAACTCTCCAGGGTTAGCC+GGG | + | chr7_4:49884959-49884978 | None:intergenic | 55.0% |
| ! | CTGAACTCTCCAGGGTTAGC+CGG | + | chr7_4:49884960-49884979 | None:intergenic | 55.0% |
| AGCAGCCAAGCACACACCTT+AGG | + | chr7_4:49885280-49885299 | None:intergenic | 55.0% | |
| TAAGGTGTGTGCTTGGCTGC+TGG | - | chr7_4:49885279-49885298 | Msa1160110:CDS | 55.0% | |
| TTCAACTGGCCAGGAAACCC+CGG | - | chr7_4:49884028-49884047 | Msa1160110:CDS | 55.0% | |
| CCCGGTTCAAACTAGCGTTC+TGG | - | chr7_4:49884046-49884065 | Msa1160110:CDS | 55.0% | |
| TAGCGTTCTGGCGCGAGTAA+TGG | - | chr7_4:49884058-49884077 | Msa1160110:CDS | 55.0% | |
| CTGGCGCGAGTAATGGTCAT+TGG | - | chr7_4:49884065-49884084 | Msa1160110:CDS | 55.0% | |
| GCGCGAGTAATGGTCATTGG+TGG | - | chr7_4:49884068-49884087 | Msa1160110:CDS | 55.0% | |
| CTGAATGCGATCCTGGATGG+AGG | + | chr7_4:49884222-49884241 | None:intergenic | 55.0% | |
| !! | AGGGTTAGCCGGGTTTGCAA+TGG | + | chr7_4:49884949-49884968 | None:intergenic | 55.0% |
| ATTGCAAACCCGGCTAACCC+TGG | - | chr7_4:49884948-49884967 | Msa1160110:CDS | 55.0% | |
| !! | TGAACTCTCCAGGGTTAGCC+GGG | + | chr7_4:49884959-49884978 | None:intergenic | 55.0% |
| ! | CTGAACTCTCCAGGGTTAGC+CGG | + | chr7_4:49884960-49884979 | None:intergenic | 55.0% |
| AGCAGCCAAGCACACACCTT+AGG | + | chr7_4:49885280-49885299 | None:intergenic | 55.0% | |
| TAAGGTGTGTGCTTGGCTGC+TGG | - | chr7_4:49885279-49885298 | Msa1160110:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 49883831 | 49885343 | 49883831 | ID=Msa1160110;Name=Msa1160110 |
| chr7_4 | mRNA | 49883831 | 49885343 | 49883831 | ID=Msa1160110-mRNA-1;Parent=Msa1160110;Name=Msa1160110-mRNA-1;_AED=0.33;_eAED=0.36;_QI=0|0|0|1|1|1|2|0|472 |
| chr7_4 | exon | 49884341 | 49885343 | 49884341 | ID=Msa1160110-mRNA-1:exon:13856;Parent=Msa1160110-mRNA-1 |
| chr7_4 | exon | 49883831 | 49884246 | 49883831 | ID=Msa1160110-mRNA-1:exon:13855;Parent=Msa1160110-mRNA-1 |
| chr7_4 | CDS | 49884341 | 49885343 | 49884341 | ID=Msa1160110-mRNA-1:cds;Parent=Msa1160110-mRNA-1 |
| chr7_4 | CDS | 49883831 | 49884246 | 49883831 | ID=Msa1160110-mRNA-1:cds;Parent=Msa1160110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
