Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114870 | XP_013449617.1 | 98.551 | 414 | 6 | 0 | 1 | 414 | 1 | 414 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114870 | sp|Q8GWE6|EER5_ARATH | 76.087 | 414 | 98 | 1 | 1 | 414 | 1 | 413 | 0.0 | 642 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114870 | A0A072UCR5 | 98.551 | 414 | 6 | 0 | 1 | 414 | 1 | 414 | 0.0 | 840 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1114870 | Msa1161920 | 0.916469 | 1.715861e-85 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114870 | MtrunA17_Chr7g0257591 | 98.551 | 414 | 6 | 0 | 1 | 414 | 1 | 414 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114870 | AT2G19560.1 | 76.087 | 414 | 98 | 1 | 1 | 414 | 1 | 413 | 0.0 | 642 |
| Msa1114870 | AT2G19560.2 | 80.573 | 314 | 60 | 1 | 101 | 414 | 2 | 314 | 0.0 | 522 |
Find 97 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATTCAAGATTTACTTTA+AGG | 0.080216 | 7_3:-61905070 | Msa1114870:intron |
| ACGTTGTTGCTTATGAAATT+AGG | 0.153786 | 7_3:-61907222 | Msa1114870:CDS |
| CGTTGTTGCTTATGAAATTA+GGG | 0.224210 | 7_3:-61907221 | Msa1114870:CDS |
| GACCCTTTCCCCAAGTTAAA+TGG | 0.224511 | 7_3:-61902207 | Msa1114870:CDS |
| GTTATAGGCTTCAACGAAAT+TGG | 0.231468 | 7_3:+61907412 | None:intergenic |
| ATATTGTACAAGCTCTAAAA+AGG | 0.257192 | 7_3:-61902851 | Msa1114870:CDS |
| TTGTTCAGGAATTTCGTAAT+TGG | 0.261819 | 7_3:-61907273 | Msa1114870:CDS |
| TTGATTGTATTCCAGGTAAA+AGG | 0.270860 | 7_3:-61905129 | Msa1114870:intron |
| ATTCTAACCTTGTCTCTATT+AGG | 0.271778 | 7_3:+61904789 | None:intergenic |
| TTTACCAGTCCTCGTGATAT+TGG | 0.284705 | 7_3:+61902799 | None:intergenic |
| ACCAGAATTAAACCTTATAT+TGG | 0.293079 | 7_3:+61904252 | None:intergenic |
| CACCTTGAAATTTAGAATCA+TGG | 0.325148 | 7_3:+61902150 | None:intergenic |
| TAATAACTTAAACAAATTAC+AGG | 0.345456 | 7_3:+61901788 | None:intergenic |
| AACAGCATGAAGCCAATATA+AGG | 0.349869 | 7_3:-61904264 | Msa1114870:intron |
| AAATTCCTCAAAATCAAATA+TGG | 0.357145 | 7_3:+61904812 | None:intergenic |
| ATTTGAGAGAGATGCCGTTT+TGG | 0.366232 | 7_3:+61907597 | None:intergenic |
| GGAGAAACGGTTGAGGTATT+CGG | 0.366603 | 7_3:+61907634 | None:intergenic |
| TTTAACAACAAGAACACATT+CGG | 0.371266 | 7_3:+61902046 | None:intergenic |
| TTCACCTGGTGAGCTCTGCT+TGG | 0.378378 | 7_3:+61902496 | None:intergenic |
| TGGTTTAGTTTCCACTTGTA+TGG | 0.384486 | 7_3:-61901947 | Msa1114870:three_prime_UTR |
| TGTTCAGGAATTTCGTAATT+GGG | 0.401599 | 7_3:-61907272 | Msa1114870:CDS |
| AAGATTCTTGTGTATCAGTA+TGG | 0.406611 | 7_3:+61902281 | None:intergenic |
| CAGAGCTCACCAGGTGAAGT+TGG | 0.407918 | 7_3:-61902491 | Msa1114870:CDS |
| TCACTAGTGAACCACATGTT+AGG | 0.410487 | 7_3:+61901814 | None:intergenic |
| TTAACAACAAGAACACATTC+GGG | 0.415211 | 7_3:+61902047 | None:intergenic |
| TTCCATTTAACTTGGGGAAA+GGG | 0.416354 | 7_3:+61902205 | None:intergenic |
| AGAGAGAAGGAAGTGGGAGT+TGG | 0.416612 | 7_3:+61907556 | None:intergenic |
| ATTCCAGTGAAGCTTTCAAT+AGG | 0.418462 | 7_3:-61903763 | Msa1114870:CDS |
| CTTCTCCAAGAGCCTGTGAT+TGG | 0.422456 | 7_3:+61903732 | None:intergenic |
| GACAGACAATTGGCTGCAAA+TGG | 0.428454 | 7_3:-61905926 | Msa1114870:CDS |
| ACATCTTCTTTACTAATCTC+TGG | 0.429870 | 7_3:+61902640 | None:intergenic |
| TCACCTGGTGAGCTCTGCTT+GGG | 0.437488 | 7_3:+61902497 | None:intergenic |
| GGAAAACCTGTCAATTCATA+AGG | 0.438899 | 7_3:-61902186 | Msa1114870:exon |
| CTGTTGGTTGCAATGCTTCA+AGG | 0.445629 | 7_3:+61904282 | None:intergenic |
| ACCCATGATTCTAAATTTCA+AGG | 0.446111 | 7_3:-61902152 | Msa1114870:three_prime_UTR |
| CCAGCACCTTTCAACTTCTC+AGG | 0.448793 | 7_3:+61905896 | None:intergenic |
| CAAGAAAGCCTGGCAATAGC+AGG | 0.449826 | 7_3:-61902127 | Msa1114870:three_prime_UTR |
| AGACCCAAGCAGAGCTCACC+AGG | 0.451286 | 7_3:-61902500 | Msa1114870:CDS |
| ATGCCTATTGAAAGCTTCAC+TGG | 0.454323 | 7_3:+61903760 | None:intergenic |
| TTCTCCAAGAGCCTGTGATT+GGG | 0.457016 | 7_3:+61903733 | None:intergenic |
| ACCTGTCAATTCATAAGGAC+TGG | 0.460956 | 7_3:-61902181 | Msa1114870:exon |
| ACCTTGAAATTTAGAATCAT+GGG | 0.461425 | 7_3:+61902151 | None:intergenic |
| GTCACTTACATGTACTATAC+TGG | 0.463654 | 7_3:-61904668 | Msa1114870:CDS |
| TCCAGTCCTTATGAATTGAC+AGG | 0.466979 | 7_3:+61902180 | None:intergenic |
| TGAAAGGGTTCTTCGGCCAT+AGG | 0.467348 | 7_3:-61902095 | Msa1114870:three_prime_UTR |
| GGGGCGATCCTCAACTTCTT+CGG | 0.477985 | 7_3:-61902830 | Msa1114870:CDS |
| AAGCTGATTAAACATTATGA+TGG | 0.483635 | 7_3:+61901757 | None:intergenic |
| TTATTGTTAAAGCATTGAAA+TGG | 0.486233 | 7_3:-61902465 | Msa1114870:CDS |
| CTTGAAGTTCTACCTTCTCT+AGG | 0.487820 | 7_3:+61902667 | None:intergenic |
| CCTGAGAAGTTGAAAGGTGC+TGG | 0.489843 | 7_3:-61905896 | Msa1114870:CDS |
| TTATATTGGCTTCATGCTGT+TGG | 0.491818 | 7_3:+61904266 | None:intergenic |
| TATTCTTGCAATTTAGATTG+TGG | 0.494659 | 7_3:-61901967 | Msa1114870:three_prime_UTR |
| TGTTGAAGTGATCGGAAAAG+AGG | 0.496197 | 7_3:+61907446 | None:intergenic |
| ATTGCCCAATCACAGGCTCT+TGG | 0.498484 | 7_3:-61903737 | Msa1114870:CDS |
| TTTGCAGGTAGAGTGTATAA+TGG | 0.498834 | 7_3:-61902304 | Msa1114870:intron |
| ATAAGGGCTACCAGTGGAAG+TGG | 0.502554 | 7_3:-61901913 | Msa1114870:three_prime_UTR |
| TTCTTATTATACTGCGGCAA+AGG | 0.505154 | 7_3:+61904853 | None:intergenic |
| AAAATTACCCTGCTATTGCC+AGG | 0.512201 | 7_3:+61902119 | None:intergenic |
| TTTCCATTTAACTTGGGGAA+AGG | 0.515780 | 7_3:+61902204 | None:intergenic |
| GTTGCAATGCTTCAAGGCAT+AGG | 0.517547 | 7_3:+61904288 | None:intergenic |
| TTTCAAGGTGCAAGAAAGCC+TGG | 0.518143 | 7_3:-61902137 | Msa1114870:three_prime_UTR |
| GTTTATAGTGTTGAAGTGAT+CGG | 0.519681 | 7_3:+61907438 | None:intergenic |
| AACAATGGCGTATTTGAGCA+TGG | 0.526938 | 7_3:-61907678 | Msa1114870:exon |
| CAATAACCTCCAACTTCACC+TGG | 0.530433 | 7_3:+61902482 | None:intergenic |
| ATGAAACGGCGTCGGAGAAA+CGG | 0.534306 | 7_3:+61907621 | None:intergenic |
| CATTCAATACAACAAACCTA+TGG | 0.536093 | 7_3:+61902079 | None:intergenic |
| TCAGTGATTTCCACTTCCAC+TGG | 0.541890 | 7_3:+61901903 | None:intergenic |
| CGGCGAGAGAGAGAAGGAAG+TGG | 0.544385 | 7_3:+61907549 | None:intergenic |
| CACTCCAATATCACGAGGAC+TGG | 0.550692 | 7_3:-61902803 | Msa1114870:intron |
| AAAACATACAACCATACAAG+TGG | 0.554205 | 7_3:+61901936 | None:intergenic |
| AATTGACATGGATGTGGATG+AGG | 0.555159 | 7_3:-61902437 | Msa1114870:intron |
| TAGGCATATTGCCCAATCAC+AGG | 0.563533 | 7_3:-61903744 | Msa1114870:CDS |
| GCTTGAAATTGACATGGATG+TGG | 0.568571 | 7_3:-61902443 | Msa1114870:CDS |
| GTAAAAGGTGCTAAGCGTGT+TGG | 0.576657 | 7_3:-61905114 | Msa1114870:CDS |
| GGCGAGAGAGAGAAGGAAGT+GGG | 0.582230 | 7_3:+61907550 | None:intergenic |
| CAATACTTCTTATTATACTG+CGG | 0.586087 | 7_3:+61904847 | None:intergenic |
| AGCTCACCAGGTGAAGTTGG+AGG | 0.588477 | 7_3:-61902488 | Msa1114870:CDS |
| ACAATGGCGTATTTGAGCAT+GGG | 0.590947 | 7_3:-61907677 | Msa1114870:CDS |
| AAATCTCCTGAGAAGTTGAA+AGG | 0.593067 | 7_3:-61905902 | Msa1114870:CDS |
| CGGCGTCGGAGAAACGGTTG+AGG | 0.594594 | 7_3:+61907627 | None:intergenic |
| AGTGCAGACCGAAGAAGTTG+AGG | 0.599498 | 7_3:+61902822 | None:intergenic |
| CTTTGCCCACAAAAGCAAAG+TGG | 0.605507 | 7_3:-61902247 | Msa1114870:CDS |
| GAGCGTCGGCGAGAGAGAGA+AGG | 0.610417 | 7_3:+61907543 | None:intergenic |
| TGTATATCTTGTCCTAGAGA+AGG | 0.611998 | 7_3:-61902679 | Msa1114870:CDS |
| ATACACAAGAATCTTGTGAA+AGG | 0.613044 | 7_3:-61902273 | Msa1114870:CDS |
| GTCGATTGAAGTCGTTGACG+AGG | 0.613533 | 7_3:+61907516 | None:intergenic |
| GACGCCGTTTCATACCAAAA+CGG | 0.616324 | 7_3:-61907611 | Msa1114870:CDS |
| TTCGTAATTGGGAATCCGCG+TGG | 0.623906 | 7_3:-61907261 | Msa1114870:CDS |
| GGAGAAGTACAATCTACTTG+AGG | 0.637346 | 7_3:-61903716 | Msa1114870:intron |
| AAGAAAGCCTGGCAATAGCA+GGG | 0.645256 | 7_3:-61902126 | Msa1114870:three_prime_UTR |
| TACAGCTTCAAGAGCCCACG+CGG | 0.650017 | 7_3:+61907246 | None:intergenic |
| GGAATTTCCTAATAGAGACA+AGG | 0.655538 | 7_3:-61904796 | Msa1114870:intron |
| GTTGACGAGGATGAGAGCGT+CGG | 0.661085 | 7_3:+61907529 | None:intergenic |
| GAAATGGCTTGAAATTGACA+TGG | 0.673583 | 7_3:-61902449 | Msa1114870:CDS |
| TAACAACAAGAACACATTCG+GGG | 0.687381 | 7_3:+61902048 | None:intergenic |
| GTCTGCACTCCAATATCACG+AGG | 0.694419 | 7_3:-61902808 | Msa1114870:CDS |
| ACTACTGAGAACCTAACATG+TGG | 0.713877 | 7_3:-61901825 | Msa1114870:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCATAAAGATAAATAATA+TGG | + | chr7_3:61904737-61904756 | None:intergenic | 10.0% |
| !!! | TTGTAAAATTTTAAACAAAA+GGG | + | chr7_3:61906041-61906060 | None:intergenic | 10.0% |
| !!! | ATTGTAAAATTTTAAACAAA+AGG | + | chr7_3:61906042-61906061 | None:intergenic | 10.0% |
| !!! | TAAGTAATTATTTTTTCTTT+TGG | - | chr7_3:61906548-61906567 | Msa1114870:intron | 10.0% |
| !!! | ATTTATACATTTATTTCTTC+TGG | + | chr7_3:61905940-61905959 | None:intergenic | 15.0% |
| !!! | TGTAAAATTTTAAACAAAAG+GGG | + | chr7_3:61906040-61906059 | None:intergenic | 15.0% |
| !! | AACTTAGCAAATTAAAAAAA+GGG | + | chr7_3:61906351-61906370 | None:intergenic | 15.0% |
| !! | AAACTTAGCAAATTAAAAAA+AGG | + | chr7_3:61906352-61906371 | None:intergenic | 15.0% |
| !!! | TTTTTTTAATTTGCTAAGTT+TGG | - | chr7_3:61906351-61906370 | Msa1114870:intron | 15.0% |
| !! | ATCTTTCAAAAAACAAATAA+AGG | - | chr7_3:61907068-61907087 | Msa1114870:intron | 15.0% |
| !! | TAATAACTTAAACAAATTAC+AGG | + | chr7_3:61907648-61907667 | None:intergenic | 15.0% |
| !!! | TTTCATTTTTGAATCAACAA+TGG | - | chr7_3:61901740-61901759 | Msa1114870:three_prime_UTR | 20.0% |
| !!! | TTTTATTGAAATTGAAGTCA+TGG | - | chr7_3:61902107-61902126 | Msa1114870:three_prime_UTR | 20.0% |
| !!! | ATTGATTCTAATTTGAAACT+AGG | - | chr7_3:61902290-61902309 | Msa1114870:CDS | 20.0% |
| !! | AAAGTAAAGTGATTTATGTT+TGG | + | chr7_3:61902513-61902532 | None:intergenic | 20.0% |
| !!! | CAAAATTGATTCTCTAATTA+GGG | + | chr7_3:61902803-61902822 | None:intergenic | 20.0% |
| !! | AATTTATTCTACTTGAAGTT+GGG | + | chr7_3:61903067-61903086 | None:intergenic | 20.0% |
| !!! | TCGTTTTCTTTTTTCATTTT+CGG | - | chr7_3:61903475-61903494 | Msa1114870:intron | 20.0% |
| !!! | AAATCATTGACTGAAAATTT+GGG | + | chr7_3:61904056-61904075 | None:intergenic | 20.0% |
| !! | GTTATTCAAGATTTACTTTA+AGG | - | chr7_3:61904363-61904382 | Msa1114870:intron | 20.0% |
| !! | AAATTCCTCAAAATCAAATA+TGG | + | chr7_3:61904624-61904643 | None:intergenic | 20.0% |
| !! | TTATCTTTATGATATGTTTC+AGG | - | chr7_3:61904743-61904762 | Msa1114870:intron | 20.0% |
| !!! | TGTATTTTTTCTTTTTTGAG+AGG | - | chr7_3:61904920-61904939 | Msa1114870:intron | 20.0% |
| !!! | GTATTTTTTCTTTTTTGAGA+GGG | - | chr7_3:61904921-61904940 | Msa1114870:intron | 20.0% |
| !!! | TATTTTTTCTTTTTTGAGAG+GGG | - | chr7_3:61904922-61904941 | Msa1114870:intron | 20.0% |
| !! | ACAAATGTAAACTCTATAAA+TGG | + | chr7_3:61905099-61905118 | None:intergenic | 20.0% |
| !!! | AAATGGAAGTATTTATTAGT+AGG | - | chr7_3:61905409-61905428 | Msa1114870:intron | 20.0% |
| !! | AAATATTATATCACAAAGAG+TGG | + | chr7_3:61906067-61906086 | None:intergenic | 20.0% |
| !!! | AGGTTTTGTTAAACTTTAAA+AGG | + | chr7_3:61906207-61906226 | None:intergenic | 20.0% |
| !!! | TAACAAAACCTTTTTTATTG+TGG | - | chr7_3:61906216-61906235 | Msa1114870:intron | 20.0% |
| !!! | TTATTGTTAAAGCATTGAAA+TGG | - | chr7_3:61906968-61906987 | Msa1114870:intron | 20.0% |
| !! | GATATAAACAAATTGAAAGT+AGG | + | chr7_3:61907051-61907070 | None:intergenic | 20.0% |
| !!! | TATGGTTGTATGTTTTATAA+GGG | - | chr7_3:61907504-61907523 | Msa1114870:CDS | 20.0% |
| !!! | ATTAACATGTATTTTTAGCT+CGG | - | chr7_3:61907562-61907581 | Msa1114870:CDS | 20.0% |
| ! | CAAATTCAATTCATTCAAAG+TGG | + | chr7_3:61902633-61902652 | None:intergenic | 25.0% |
| ! | CACTTTGAATGAATTGAATT+TGG | - | chr7_3:61902631-61902650 | Msa1114870:intron | 25.0% |
| ! | TTGAACATTAAGTGTATGTT+TGG | + | chr7_3:61902760-61902779 | None:intergenic | 25.0% |
| !! | GCAAAATTGATTCTCTAATT+AGG | + | chr7_3:61902804-61902823 | None:intergenic | 25.0% |
| ! | GTATAACACGATTTACATTT+GGG | + | chr7_3:61902887-61902906 | None:intergenic | 25.0% |
| ! | TGTATAACACGATTTACATT+TGG | + | chr7_3:61902888-61902907 | None:intergenic | 25.0% |
| !! | AAAGTAAGTTGAATGTTAAG+TGG | - | chr7_3:61902967-61902986 | Msa1114870:intron | 25.0% |
| ! | GAATTTATTCTACTTGAAGT+TGG | + | chr7_3:61903068-61903087 | None:intergenic | 25.0% |
| ! | TCAAGTAGAATAAATTCTAG+AGG | - | chr7_3:61903071-61903090 | Msa1114870:intron | 25.0% |
| !!! | GAAATTGATTTTGTGATGTT+TGG | + | chr7_3:61903122-61903141 | None:intergenic | 25.0% |
| ! | TATACAAATGTTCAGTTCTA+CGG | + | chr7_3:61903388-61903407 | None:intergenic | 25.0% |
| !! | TTATATTTTGCTTCTCAGTT+TGG | - | chr7_3:61903413-61903432 | Msa1114870:intron | 25.0% |
| ! | ATTCACACTCAAATAAAAGA+AGG | + | chr7_3:61903454-61903473 | None:intergenic | 25.0% |
| !!! | CTTTTTTCATTTTCGGTTTT+AGG | - | chr7_3:61903482-61903501 | Msa1114870:intron | 25.0% |
| !! | TCTTTACTCATGAAAGTTTT+TGG | - | chr7_3:61903561-61903580 | Msa1114870:intron | 25.0% |
| !!! | ATTTTAATTTGAAACCCAAG+TGG | - | chr7_3:61903618-61903637 | Msa1114870:intron | 25.0% |
| ! | TTTGAAAAAGAGACCTAATT+GGG | + | chr7_3:61903743-61903762 | None:intergenic | 25.0% |
| !!! | TTTTGAAAAAGAGACCTAAT+TGG | + | chr7_3:61903744-61903763 | None:intergenic | 25.0% |
| !! | CAAATCATTGACTGAAAATT+TGG | + | chr7_3:61904057-61904076 | None:intergenic | 25.0% |
| !! | CAAATTTTCAGTCAATGATT+TGG | - | chr7_3:61904055-61904074 | Msa1114870:intron | 25.0% |
| ! | CAATACTTCTTATTATACTG+CGG | + | chr7_3:61904589-61904608 | None:intergenic | 25.0% |
| ! | AAATTTAGACTACTTACAGA+AGG | + | chr7_3:61904819-61904838 | None:intergenic | 25.0% |
| ! | TGCAAATAATTTAAACCAGA+AGG | + | chr7_3:61904963-61904982 | None:intergenic | 25.0% |
| ! | ACCAGAATTAAACCTTATAT+TGG | + | chr7_3:61905184-61905203 | None:intergenic | 25.0% |
| ! | TAAATTTGCCTGCAAATTAA+AGG | - | chr7_3:61905258-61905277 | Msa1114870:intron | 25.0% |
| !!! | TAGGAATGTTTTTTACTAGT+GGG | - | chr7_3:61905428-61905447 | Msa1114870:intron | 25.0% |
| !! | TTGGATTTTGCAGTTTATAT+GGG | + | chr7_3:61905462-61905481 | None:intergenic | 25.0% |
| !! | TTTGGATTTTGCAGTTTATA+TGG | + | chr7_3:61905463-61905482 | None:intergenic | 25.0% |
| !!! | CTTAGTTTACTTTTATGACT+AGG | - | chr7_3:61905888-61905907 | Msa1114870:CDS | 25.0% |
| !! | AATTGGTAACATAAACATGA+TGG | + | chr7_3:61906127-61906146 | None:intergenic | 25.0% |
| ! | TTAGCAAATTAAAAAAAGGG+AGG | + | chr7_3:61906348-61906367 | None:intergenic | 25.0% |
| !!! | TTTTTCAAAAATCAAGCACT+TGG | - | chr7_3:61906388-61906407 | Msa1114870:intron | 25.0% |
| ! | ATTAGCAGTATAAACAGAAA+CGG | + | chr7_3:61906429-61906448 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTTTTGGACAGTA+CGG | - | chr7_3:61906557-61906576 | Msa1114870:intron | 25.0% |
| !!! | ATATTGTACAAGCTCTAAAA+AGG | - | chr7_3:61906582-61906601 | Msa1114870:intron | 25.0% |
| !!! | TATTGTACAAGCTCTAAAAA+GGG | - | chr7_3:61906583-61906602 | Msa1114870:intron | 25.0% |
| ! | TTAATATTTGATGCATTTGC+AGG | - | chr7_3:61907114-61907133 | Msa1114870:intron | 25.0% |
| !! | ACCTTGAAATTTAGAATCAT+GGG | + | chr7_3:61907285-61907304 | None:intergenic | 25.0% |
| ! | TTTAACAACAAGAACACATT+CGG | + | chr7_3:61907390-61907409 | None:intergenic | 25.0% |
| ! | TATTCTTGCAATTTAGATTG+TGG | - | chr7_3:61907466-61907485 | Msa1114870:CDS | 25.0% |
| !! | GTATGGTTGTATGTTTTATA+AGG | - | chr7_3:61907503-61907522 | Msa1114870:CDS | 25.0% |
| ! | AAGCTGATTAAACATTATGA+TGG | + | chr7_3:61907679-61907698 | None:intergenic | 25.0% |
| ! | GTTTATAGTGTTGAAGTGAT+CGG | + | chr7_3:61901998-61902017 | None:intergenic | 30.0% |
| AAAGAATGAATCATACTTGG+TGG | + | chr7_3:61902060-61902079 | None:intergenic | 30.0% | |
| ACGAAAGAATGAATCATACT+TGG | + | chr7_3:61902063-61902082 | None:intergenic | 30.0% | |
| !! | AGTCATGGATTTTAATGTTG+TGG | - | chr7_3:61902122-61902141 | Msa1114870:three_prime_UTR | 30.0% |
| TTGTTCAGGAATTTCGTAAT+TGG | - | chr7_3:61902160-61902179 | Msa1114870:three_prime_UTR | 30.0% | |
| TGTTCAGGAATTTCGTAATT+GGG | - | chr7_3:61902161-61902180 | Msa1114870:three_prime_UTR | 30.0% | |
| ! | ACGTTGTTGCTTATGAAATT+AGG | - | chr7_3:61902211-61902230 | Msa1114870:CDS | 30.0% |
| ! | CGTTGTTGCTTATGAAATTA+GGG | - | chr7_3:61902212-61902231 | Msa1114870:CDS | 30.0% |
| ! | AAAAGTATGTTGTGTCTGTT+TGG | - | chr7_3:61902245-61902264 | Msa1114870:CDS | 30.0% |
| ! | TAATGTTCAACTCGATTTTG+TGG | - | chr7_3:61902770-61902789 | Msa1114870:intron | 30.0% |
| !! | TTTGGTATCACTTTTGAAAG+AGG | + | chr7_3:61902826-61902845 | None:intergenic | 30.0% |
| !! | TAAGGTTCAACTTACTTTTG+CGG | - | chr7_3:61902854-61902873 | Msa1114870:CDS | 30.0% |
| TGTTATACATAGTGCATGTT+TGG | - | chr7_3:61902899-61902918 | Msa1114870:intron | 30.0% | |
| !! | ATTTGTAGCTTTGAGTCTAA+AGG | + | chr7_3:61903044-61903063 | None:intergenic | 30.0% |
| TCAATATTTAGCACTGTTAG+CGG | - | chr7_3:61903228-61903247 | Msa1114870:intron | 30.0% | |
| AGTATGTTATGTTAGTAGCA+AGG | + | chr7_3:61903686-61903705 | None:intergenic | 30.0% | |
| ! | TGGGAATCAACTTTGTTTAA+AGG | + | chr7_3:61903724-61903743 | None:intergenic | 30.0% |
| ! | AACAAAGTTGATTCCCAATT+AGG | - | chr7_3:61903727-61903746 | Msa1114870:CDS | 30.0% |
| ATGCATGAATAGGCTAAAAT+TGG | + | chr7_3:61904081-61904100 | None:intergenic | 30.0% | |
| ! | TCTTGTGCATACTTTTGTTA+AGG | - | chr7_3:61904142-61904161 | Msa1114870:intron | 30.0% |
| TACTTCCATGATTCATTAAG+TGG | - | chr7_3:61904233-61904252 | Msa1114870:intron | 30.0% | |
| TTATAGCTTGATTGTATTCC+AGG | - | chr7_3:61904297-61904316 | Msa1114870:CDS | 30.0% | |
| TTGATTGTATTCCAGGTAAA+AGG | - | chr7_3:61904304-61904323 | Msa1114870:CDS | 30.0% | |
| !! | GACAACCATATTTGATTTTG+AGG | - | chr7_3:61904616-61904635 | Msa1114870:intron | 30.0% |
| ATTCTAACCTTGTCTCTATT+AGG | + | chr7_3:61904647-61904666 | None:intergenic | 30.0% | |
| ! | TTTTCTATGATGTTACCTTC+TGG | - | chr7_3:61904945-61904964 | Msa1114870:intron | 30.0% |
| GCCAATATAAGGTTTAATTC+TGG | - | chr7_3:61905180-61905199 | Msa1114870:intron | 30.0% | |
| TGCTTAGTGAATATTCTCTT+TGG | - | chr7_3:61905375-61905394 | Msa1114870:intron | 30.0% | |
| TTAGTGAATATTCTCTTTGG+TGG | - | chr7_3:61905378-61905397 | Msa1114870:intron | 30.0% | |
| !!! | GTAGGAATGTTTTTTACTAG+TGG | - | chr7_3:61905427-61905446 | Msa1114870:intron | 30.0% |
| ! | TGGATTTTGCAGTTTATATG+GGG | + | chr7_3:61905461-61905480 | None:intergenic | 30.0% |
| ATCTCATTGTTCATCTATGA+AGG | - | chr7_3:61905525-61905544 | Msa1114870:intron | 30.0% | |
| TCTCATTGTTCATCTATGAA+GGG | - | chr7_3:61905526-61905545 | Msa1114870:intron | 30.0% | |
| !! | AACCAGTTTTTGTTTGACAT+AGG | - | chr7_3:61905629-61905648 | Msa1114870:intron | 30.0% |
| ATCCTATGTCAAACAAAAAC+TGG | + | chr7_3:61905634-61905653 | None:intergenic | 30.0% | |
| ! | TTATTTTCCACTCTCTCTAT+GGG | - | chr7_3:61905766-61905785 | Msa1114870:intron | 30.0% |
| CTAGTTAATTGAGCGTTAAT+TGG | + | chr7_3:61906144-61906163 | None:intergenic | 30.0% | |
| ACAGTAAAGTTGTTGTCATT+AGG | - | chr7_3:61906251-61906270 | Msa1114870:intron | 30.0% | |
| AAATTAAAAAAAGGGAGGAC+CGG | + | chr7_3:61906343-61906362 | None:intergenic | 30.0% | |
| TACTTATAGAGACATTTCTG+AGG | + | chr7_3:61906534-61906553 | None:intergenic | 30.0% | |
| !! | ATTGTACAAGCTCTAAAAAG+GGG | - | chr7_3:61906584-61906603 | Msa1114870:intron | 30.0% |
| ACATCTTCTTTACTAATCTC+TGG | + | chr7_3:61906796-61906815 | None:intergenic | 30.0% | |
| ATTGAAAGTAGGAAAGAATG+AGG | + | chr7_3:61907040-61907059 | None:intergenic | 30.0% | |
| AAGATTCTTGTGTATCAGTA+TGG | + | chr7_3:61907155-61907174 | None:intergenic | 30.0% | |
| ATACACAAGAATCTTGTGAA+AGG | - | chr7_3:61907160-61907179 | Msa1114870:intron | 30.0% | |
| !! | ACAGGTTTTCCATTTAACTT+GGG | + | chr7_3:61907238-61907257 | None:intergenic | 30.0% |
| ACCCATGATTCTAAATTTCA+AGG | - | chr7_3:61907281-61907300 | Msa1114870:CDS | 30.0% | |
| ! | CACCTTGAAATTTAGAATCA+TGG | + | chr7_3:61907286-61907305 | None:intergenic | 30.0% |
| ! | AATTTTGTGAAAGGGTTCTT+CGG | - | chr7_3:61907331-61907350 | Msa1114870:intron | 30.0% |
| CATTCAATACAACAAACCTA+TGG | + | chr7_3:61907357-61907376 | None:intergenic | 30.0% | |
| TTAACAACAAGAACACATTC+GGG | + | chr7_3:61907389-61907408 | None:intergenic | 30.0% | |
| AAAACATACAACCATACAAG+TGG | + | chr7_3:61907500-61907519 | None:intergenic | 30.0% | |
| GTTATAGGCTTCAACGAAAT+TGG | + | chr7_3:61902024-61902043 | None:intergenic | 35.0% | |
| !!! | GGTTTTTTCGAAAGCGTTAT+AGG | + | chr7_3:61902039-61902058 | None:intergenic | 35.0% |
| ! | AATTTTCAGTGCGTTTGTTC+AGG | - | chr7_3:61902146-61902165 | Msa1114870:three_prime_UTR | 35.0% |
| CGAAACATACAATACACGTT+TGG | + | chr7_3:61902333-61902352 | None:intergenic | 35.0% | |
| ! | AATTAAAACCCCTCTAGAAG+TGG | + | chr7_3:61902358-61902377 | None:intergenic | 35.0% |
| !! | CTTTGCTTTTGTCTCTAGAA+TGG | - | chr7_3:61902398-61902417 | Msa1114870:intron | 35.0% |
| ! | AATGGATTCTACTTGAAGCT+AGG | - | chr7_3:61902416-61902435 | Msa1114870:intron | 35.0% |
| AACCAAACATAGTGTGTGTT+TGG | - | chr7_3:61902589-61902608 | Msa1114870:intron | 35.0% | |
| AACCAAACACACACTATGTT+TGG | + | chr7_3:61902594-61902613 | None:intergenic | 35.0% | |
| !!! | ATAGTGTGTGTTTGGTTTTG+TGG | - | chr7_3:61902597-61902616 | Msa1114870:intron | 35.0% |
| GAGTTGAATGTAAACTGAAC+TGG | - | chr7_3:61902677-61902696 | Msa1114870:CDS | 35.0% | |
| TTGAATGTAAACTGAACTGG+AGG | - | chr7_3:61902680-61902699 | Msa1114870:CDS | 35.0% | |
| CAAATTTGCCTCTTCAAAAG+TGG | - | chr7_3:61902732-61902751 | Msa1114870:intron | 35.0% | |
| TGATACCAAACACACACTTA+AGG | - | chr7_3:61902836-61902855 | Msa1114870:CDS | 35.0% | |
| TTGAACCTTAAGTGTGTGTT+TGG | + | chr7_3:61902844-61902863 | None:intergenic | 35.0% | |
| ! | AGCAGTCTAATTGATTCTAG+AGG | + | chr7_3:61903148-61903167 | None:intergenic | 35.0% |
| CTAAACGTGAAACCAATCAT+AGG | - | chr7_3:61903168-61903187 | Msa1114870:intron | 35.0% | |
| ! | AAGTAAGTTGAGCCTATGAT+TGG | + | chr7_3:61903183-61903202 | None:intergenic | 35.0% |
| CTTGAGAGGAGTTTATAAAG+AGG | - | chr7_3:61903296-61903315 | Msa1114870:intron | 35.0% | |
| AAATCTCCTGAGAAGTTGAA+AGG | - | chr7_3:61903531-61903550 | Msa1114870:intron | 35.0% | |
| GAAAATGTTTACATACCGCA+AGG | + | chr7_3:61903590-61903609 | None:intergenic | 35.0% | |
| ACAGTGGTACGAAACTAAAT+TGG | + | chr7_3:61903771-61903790 | None:intergenic | 35.0% | |
| !! | TACCACTGTTGATTGGTTTA+GGG | - | chr7_3:61903782-61903801 | Msa1114870:CDS | 35.0% |
| CTTTGCAATGCTAAGCAATA+TGG | + | chr7_3:61903815-61903834 | None:intergenic | 35.0% | |
| !! | AACTACTTTTGCCATATCTC+AGG | + | chr7_3:61903966-61903985 | None:intergenic | 35.0% |
| ACTTTAACAACAAGCTCAAC+AGG | + | chr7_3:61904018-61904037 | None:intergenic | 35.0% | |
| CAAGTAGTACATGCATGAAT+AGG | + | chr7_3:61904091-61904110 | None:intergenic | 35.0% | |
| ATTCATGCATGTACTACTTG+TGG | - | chr7_3:61904091-61904110 | Msa1114870:intron | 35.0% | |
| CACAAAACAACACAAAGCTA+TGG | + | chr7_3:61904206-61904225 | None:intergenic | 35.0% | |
| CACATCCACTTAATGAATCA+TGG | + | chr7_3:61904241-61904260 | None:intergenic | 35.0% | |
| GTGTGAAATTTCACTTTCAG+AGG | - | chr7_3:61904258-61904277 | Msa1114870:intron | 35.0% | |
| ! | TCTCATTTGTTGACATATGC+TGG | - | chr7_3:61904441-61904460 | Msa1114870:intron | 35.0% |
| ! | AGCTGCAAAACATTTGTTGA+TGG | + | chr7_3:61904548-61904567 | None:intergenic | 35.0% |
| ! | TCAACAAATGTTTTGCAGCT+TGG | - | chr7_3:61904548-61904567 | Msa1114870:intron | 35.0% |
| TTCTTATTATACTGCGGCAA+AGG | + | chr7_3:61904583-61904602 | None:intergenic | 35.0% | |
| GGAATTTCCTAATAGAGACA+AGG | - | chr7_3:61904637-61904656 | Msa1114870:CDS | 35.0% | |
| GTCACTTACATGTACTATAC+TGG | - | chr7_3:61904765-61904784 | Msa1114870:intron | 35.0% | |
| GTTTACATTTGTGACTTGAC+AGG | - | chr7_3:61905107-61905126 | Msa1114870:CDS | 35.0% | |
| !! | TTATATTGGCTTCATGCTGT+TGG | + | chr7_3:61905170-61905189 | None:intergenic | 35.0% |
| AACAGCATGAAGCCAATATA+AGG | - | chr7_3:61905169-61905188 | Msa1114870:intron | 35.0% | |
| ! | CATGAAGTGAGCTTTCTTTT+AGG | - | chr7_3:61905229-61905248 | Msa1114870:intron | 35.0% |
| !! | CAAATGCACCTTTAATTTGC+AGG | + | chr7_3:61905269-61905288 | None:intergenic | 35.0% |
| ! | GCAAATTAAAGGTGCATTTG+TGG | - | chr7_3:61905269-61905288 | Msa1114870:intron | 35.0% |
| ! | ATTAAAGGTGCATTTGTGGA+TGG | - | chr7_3:61905273-61905292 | Msa1114870:intron | 35.0% |
| ! | TTAAAGGTGCATTTGTGGAT+GGG | - | chr7_3:61905274-61905293 | Msa1114870:intron | 35.0% |
| ! | GGATTTTGCAGTTTATATGG+GGG | + | chr7_3:61905460-61905479 | None:intergenic | 35.0% |
| TTTACTAGGGTAGGAAGATT+TGG | + | chr7_3:61905481-61905500 | None:intergenic | 35.0% | |
| CAGAAGGACAGAGTTAAATA+TGG | + | chr7_3:61905596-61905615 | None:intergenic | 35.0% | |
| ATTCCAGTGAAGCTTTCAAT+AGG | - | chr7_3:61905670-61905689 | Msa1114870:intron | 35.0% | |
| ACAATCTACTTGAGGTATGT+TGG | - | chr7_3:61905725-61905744 | Msa1114870:intron | 35.0% | |
| CAATCTACTTGAGGTATGTT+GGG | - | chr7_3:61905726-61905745 | Msa1114870:intron | 35.0% | |
| !! | GTTATTTTCCACTCTCTCTA+TGG | - | chr7_3:61905765-61905784 | Msa1114870:intron | 35.0% |
| ! | TATTTTCCACTCTCTCTATG+GGG | - | chr7_3:61905767-61905786 | Msa1114870:intron | 35.0% |
| !!! | GTAAACCTTTTAGAGCTTGT+AGG | - | chr7_3:61905831-61905850 | Msa1114870:intron | 35.0% |
| AAACTAAGTTACTGCTCAGA+CGG | + | chr7_3:61905876-61905895 | None:intergenic | 35.0% | |
| ! | TTTTCCAAGTGCCAATTTGT+AGG | - | chr7_3:61905976-61905995 | Msa1114870:intron | 35.0% |
| ! | TTTTAAACAAAAGGGGCGAA+GGG | + | chr7_3:61906033-61906052 | None:intergenic | 35.0% |
| ! | ATTTTAAACAAAAGGGGCGA+AGG | + | chr7_3:61906034-61906053 | None:intergenic | 35.0% |
| TGGACATTATCAGTAATGAG+AGG | + | chr7_3:61906107-61906126 | None:intergenic | 35.0% | |
| TGCTAAGTTTGGCTATTCAA+AGG | - | chr7_3:61906362-61906381 | Msa1114870:intron | 35.0% | |
| GCTAAGTTTGGCTATTCAAA+GGG | - | chr7_3:61906363-61906382 | Msa1114870:intron | 35.0% | |
| AAAAATCAAGCACTTGGAGT+TGG | - | chr7_3:61906394-61906413 | Msa1114870:intron | 35.0% | |
| CATAACAACCTGATTACATC+TGG | - | chr7_3:61906467-61906486 | Msa1114870:intron | 35.0% | |
| ATCAACAACCAGATGTAATC+AGG | + | chr7_3:61906478-61906497 | None:intergenic | 35.0% | |
| CCTCATAATGAAACAACGAT+GGG | + | chr7_3:61906664-61906683 | None:intergenic | 35.0% | |
| TCCTCATAATGAAACAACGA+TGG | + | chr7_3:61906665-61906684 | None:intergenic | 35.0% | |
| TGTATATCTTGTCCTAGAGA+AGG | - | chr7_3:61906754-61906773 | Msa1114870:intron | 35.0% | |
| TAATACACATCGAAAAGGAG+GGG | + | chr7_3:61906842-61906861 | None:intergenic | 35.0% | |
| CTAATACACATCGAAAAGGA+GGG | + | chr7_3:61906843-61906862 | None:intergenic | 35.0% | |
| ACAGCTAATACACATCGAAA+AGG | + | chr7_3:61906847-61906866 | None:intergenic | 35.0% | |
| GAAATGGCTTGAAATTGACA+TGG | - | chr7_3:61906984-61907003 | Msa1114870:intron | 35.0% | |
| TTTGCAGGTAGAGTGTATAA+TGG | - | chr7_3:61907129-61907148 | Msa1114870:intron | 35.0% | |
| !! | TTCCATTTAACTTGGGGAAA+GGG | + | chr7_3:61907231-61907250 | None:intergenic | 35.0% |
| !! | TTTCCATTTAACTTGGGGAA+AGG | + | chr7_3:61907232-61907251 | None:intergenic | 35.0% |
| !!! | CAGGTTTTCCATTTAACTTG+GGG | + | chr7_3:61907237-61907256 | None:intergenic | 35.0% |
| ! | GACAGGTTTTCCATTTAACT+TGG | + | chr7_3:61907239-61907258 | None:intergenic | 35.0% |
| GGAAAACCTGTCAATTCATA+AGG | - | chr7_3:61907247-61907266 | Msa1114870:CDS | 35.0% | |
| ! | TAGCAGGGTAATTTTGTGAA+AGG | - | chr7_3:61907322-61907341 | Msa1114870:intron | 35.0% |
| ! | AGCAGGGTAATTTTGTGAAA+GGG | - | chr7_3:61907323-61907342 | Msa1114870:intron | 35.0% |
| TAACAACAAGAACACATTCG+GGG | + | chr7_3:61907388-61907407 | None:intergenic | 35.0% | |
| ! | TGGTTTAGTTTCCACTTGTA+TGG | - | chr7_3:61907486-61907505 | Msa1114870:CDS | 35.0% |
| AACAATGGCGTATTTGAGCA+TGG | - | chr7_3:61901755-61901774 | Msa1114870:three_prime_UTR | 40.0% | |
| ACAATGGCGTATTTGAGCAT+GGG | - | chr7_3:61901756-61901775 | Msa1114870:three_prime_UTR | 40.0% | |
| !!! | GATGCCGTTTTGGTATGAAA+CGG | + | chr7_3:61901829-61901848 | None:intergenic | 40.0% |
| !! | ATTTGAGAGAGATGCCGTTT+TGG | + | chr7_3:61901839-61901858 | None:intergenic | 40.0% |
| TGTTGAAGTGATCGGAAAAG+AGG | + | chr7_3:61901990-61902009 | None:intergenic | 40.0% | |
| ATGTTTCGTTCCACTTCTAG+AGG | - | chr7_3:61902345-61902364 | Msa1114870:intron | 40.0% | |
| TGTTTCGTTCCACTTCTAGA+GGG | - | chr7_3:61902346-61902365 | Msa1114870:intron | 40.0% | |
| !! | ACACACTATGTTTGGTTCTG+CGG | + | chr7_3:61902586-61902605 | None:intergenic | 40.0% |
| !! | GTTTGGTTCCACTTTTGAAG+AGG | + | chr7_3:61902743-61902762 | None:intergenic | 40.0% |
| GAATCCTATCTATCCGATGT+GGG | + | chr7_3:61903277-61903296 | None:intergenic | 40.0% | |
| AGAATCCTATCTATCCGATG+TGG | + | chr7_3:61903278-61903297 | None:intergenic | 40.0% | |
| GGATAGATAGGATTCTTGAG+AGG | - | chr7_3:61903282-61903301 | Msa1114870:intron | 40.0% | |
| GAGAGGAGTTTATAAAGAGG+AGG | - | chr7_3:61903299-61903318 | Msa1114870:intron | 40.0% | |
| CTAACTCATCCTTACAAGAC+AGG | + | chr7_3:61903343-61903362 | None:intergenic | 40.0% | |
| CTGTCTTGTAAGGATGAGTT+AGG | - | chr7_3:61903341-61903360 | Msa1114870:intron | 40.0% | |
| GGTGCTTGTAATGAATATCG+AGG | + | chr7_3:61903367-61903386 | None:intergenic | 40.0% | |
| !! | GTTTTAGGCTGACAGACAAT+TGG | - | chr7_3:61903497-61903516 | Msa1114870:intron | 40.0% |
| !!! | GAAAGTTTTTGGCATCCTTG+CGG | - | chr7_3:61903572-61903591 | Msa1114870:intron | 40.0% |
| AGTTTCGTACCACTGTTGAT+TGG | - | chr7_3:61903775-61903794 | Msa1114870:CDS | 40.0% | |
| !! | GTACCACTGTTGATTGGTTT+AGG | - | chr7_3:61903781-61903800 | Msa1114870:CDS | 40.0% |
| CATTAGAAACCAATGGCATC+AGG | + | chr7_3:61903846-61903865 | None:intergenic | 40.0% | |
| TTAACAACAAGCTCAACAGG+TGG | + | chr7_3:61904015-61904034 | None:intergenic | 40.0% | |
| !! | GCTTGTTGTTAAAGTTGAGC+TGG | - | chr7_3:61904023-61904042 | Msa1114870:intron | 40.0% |
| CGATAGGAAAGGAAAGCAAA+CGG | + | chr7_3:61904396-61904415 | None:intergenic | 40.0% | |
| CGTTTGCTTTCCTTTCCTAT+CGG | - | chr7_3:61904394-61904413 | Msa1114870:intron | 40.0% | |
| GTTTGCTTTCCTTTCCTATC+GGG | - | chr7_3:61904395-61904414 | Msa1114870:intron | 40.0% | |
| TTTGCTTTCCTTTCCTATCG+GGG | - | chr7_3:61904396-61904415 | Msa1114870:intron | 40.0% | |
| ATCTGAACTTGTAGCATCTC+AGG | - | chr7_3:61904469-61904488 | Msa1114870:intron | 40.0% | |
| TCAGAACTCAGAACACAATC+AGG | + | chr7_3:61904861-61904880 | None:intergenic | 40.0% | |
| ! | TAAAGGTGCATTTGTGGATG+GGG | - | chr7_3:61905275-61905294 | Msa1114870:intron | 40.0% |
| ! | CTTTGGTGGCTAAGCAAAAA+TGG | - | chr7_3:61905392-61905411 | Msa1114870:intron | 40.0% |
| TTTGCAGTTTATATGGGGGT+TGG | + | chr7_3:61905456-61905475 | None:intergenic | 40.0% | |
| ATCTTCCTACCCTAGTAAAG+AGG | - | chr7_3:61905482-61905501 | Msa1114870:intron | 40.0% | |
| GTTACAGATCGTCATACAGA+AGG | + | chr7_3:61905612-61905631 | None:intergenic | 40.0% | |
| ATGCCTATTGAAAGCTTCAC+TGG | + | chr7_3:61905676-61905695 | None:intergenic | 40.0% | |
| ! | GGAGAAGTACAATCTACTTG+AGG | - | chr7_3:61905717-61905736 | Msa1114870:intron | 40.0% |
| ! | ATTTTCCACTCTCTCTATGG+GGG | - | chr7_3:61905768-61905787 | Msa1114870:intron | 40.0% |
| AGACGGAAACATAACTGAGT+TGG | + | chr7_3:61905859-61905878 | None:intergenic | 40.0% | |
| ! | TTTTCCCACAAGTGTCTGAT+GGG | - | chr7_3:61906002-61906021 | Msa1114870:intron | 40.0% |
| ! | CCAAGGCACCACAATAAAAA+AGG | + | chr7_3:61906227-61906246 | None:intergenic | 40.0% |
| !!! | CCTTTTTTATTGTGGTGCCT+TGG | - | chr7_3:61906224-61906243 | Msa1114870:intron | 40.0% |
| CGTACAATACACCAAATGGT+TGG | - | chr7_3:61906277-61906296 | Msa1114870:intron | 40.0% | |
| TTTACCAGTCCTCGTGATAT+TGG | + | chr7_3:61906637-61906656 | None:intergenic | 40.0% | |
| ! | CCCATCGTTGTTTCATTATG+AGG | - | chr7_3:61906661-61906680 | Msa1114870:intron | 40.0% |
| !!! | ATGCTCTCTAGAGCAACTTT+TGG | + | chr7_3:61906696-61906715 | None:intergenic | 40.0% |
| CTTGAAGTTCTACCTTCTCT+AGG | + | chr7_3:61906769-61906788 | None:intergenic | 40.0% | |
| AATACACATCGAAAAGGAGG+GGG | + | chr7_3:61906841-61906860 | None:intergenic | 40.0% | |
| GCTAATACACATCGAAAAGG+AGG | + | chr7_3:61906844-61906863 | None:intergenic | 40.0% | |
| GCTTGAAATTGACATGGATG+TGG | - | chr7_3:61906990-61907009 | Msa1114870:intron | 40.0% | |
| AATTGACATGGATGTGGATG+AGG | - | chr7_3:61906996-61907015 | Msa1114870:intron | 40.0% | |
| GAAAGTAGGAAAGAATGAGG+AGG | + | chr7_3:61907037-61907056 | None:intergenic | 40.0% | |
| !! | TACAGCCACTTTGCTTTTGT+GGG | + | chr7_3:61907194-61907213 | None:intergenic | 40.0% |
| !! | ATACAGCCACTTTGCTTTTG+TGG | + | chr7_3:61907195-61907214 | None:intergenic | 40.0% |
| ACCTGTCAATTCATAAGGAC+TGG | - | chr7_3:61907252-61907271 | Msa1114870:CDS | 40.0% | |
| TCCAGTCCTTATGAATTGAC+AGG | + | chr7_3:61907256-61907275 | None:intergenic | 40.0% | |
| AAAATTACCCTGCTATTGCC+AGG | + | chr7_3:61907317-61907336 | None:intergenic | 40.0% | |
| ! | TGTTTTATAAGGGCTACCAG+TGG | - | chr7_3:61907514-61907533 | Msa1114870:CDS | 40.0% |
| ACTACTGAGAACCTAACATG+TGG | - | chr7_3:61907608-61907627 | Msa1114870:CDS | 40.0% | |
| TCACTAGTGAACCACATGTT+AGG | + | chr7_3:61907622-61907641 | None:intergenic | 40.0% | |
| ! | GGAGAAACGGTTGAGGTATT+CGG | + | chr7_3:61901802-61901821 | None:intergenic | 45.0% |
| !! | GTTTTGGTATGAAACGGCGT+CGG | + | chr7_3:61901823-61901842 | None:intergenic | 45.0% |
| GACGCCGTTTCATACCAAAA+CGG | - | chr7_3:61901822-61901841 | Msa1114870:three_prime_UTR | 45.0% | |
| ! | GTTTCGTTCCACTTCTAGAG+GGG | - | chr7_3:61902347-61902366 | Msa1114870:intron | 45.0% |
| TAGTCCCACATCGGATAGAT+AGG | - | chr7_3:61903270-61903289 | Msa1114870:intron | 45.0% | |
| CCTTACAAGACAGGCTTGTA+CGG | + | chr7_3:61903334-61903353 | None:intergenic | 45.0% | |
| GACAGACAATTGGCTGCAAA+TGG | - | chr7_3:61903507-61903526 | Msa1114870:intron | 45.0% | |
| GACCCTAAACCAATCAACAG+TGG | + | chr7_3:61903787-61903806 | None:intergenic | 45.0% | |
| GTGAATAAGCCTGATGCCAT+TGG | - | chr7_3:61903834-61903853 | Msa1114870:intron | 45.0% | |
| ! | AGGGGTGCATTAGAAACCAA+TGG | + | chr7_3:61903853-61903872 | None:intergenic | 45.0% |
| TCCCAGATGAACCTGAGATA+TGG | - | chr7_3:61903952-61903971 | Msa1114870:intron | 45.0% | |
| GCCATATCTCAGGTTCATCT+GGG | + | chr7_3:61903956-61903975 | None:intergenic | 45.0% | |
| TGCCATATCTCAGGTTCATC+TGG | + | chr7_3:61903957-61903976 | None:intergenic | 45.0% | |
| !! | GTAAAAGGTGCTAAGCGTGT+TGG | - | chr7_3:61904319-61904338 | Msa1114870:intron | 45.0% |
| TTGCTTTCCTTTCCTATCGG+GGG | - | chr7_3:61904397-61904416 | Msa1114870:intron | 45.0% | |
| CTATAAACCCCCGATAGGAA+AGG | + | chr7_3:61904407-61904426 | None:intergenic | 45.0% | |
| ACTTTCTGTATGCTTCCTGC+TGG | - | chr7_3:61904882-61904901 | Msa1114870:intron | 45.0% | |
| TAGAAAACTACGAAGCCAGC+AGG | + | chr7_3:61904900-61904919 | None:intergenic | 45.0% | |
| GTTGCAATGCTTCAAGGCAT+AGG | + | chr7_3:61905148-61905167 | None:intergenic | 45.0% | |
| ! | CTGTTGGTTGCAATGCTTCA+AGG | + | chr7_3:61905154-61905173 | None:intergenic | 45.0% |
| CTACCCTAGTAAAGAGGAGT+GGG | - | chr7_3:61905488-61905507 | Msa1114870:intron | 45.0% | |
| GTTCCCACTCCTCTTTACTA+GGG | + | chr7_3:61905494-61905513 | None:intergenic | 45.0% | |
| TGTTCCCACTCCTCTTTACT+AGG | + | chr7_3:61905495-61905514 | None:intergenic | 45.0% | |
| TAGGCATATTGCCCAATCAC+AGG | - | chr7_3:61905689-61905708 | Msa1114870:intron | 45.0% | |
| TTCTCCAAGAGCCTGTGATT+GGG | + | chr7_3:61905703-61905722 | None:intergenic | 45.0% | |
| TGAGGTATGTTGGGTGCTTA+TGG | - | chr7_3:61905735-61905754 | Msa1114870:intron | 45.0% | |
| GTATGTTGGGTGCTTATGGA+TGG | - | chr7_3:61905739-61905758 | Msa1114870:intron | 45.0% | |
| ! | TTTTCCACTCTCTCTATGGG+GGG | - | chr7_3:61905769-61905788 | Msa1114870:intron | 45.0% |
| !! | TGGCACCTACAAGCTCTAAA+AGG | + | chr7_3:61905839-61905858 | None:intergenic | 45.0% |
| TCCAAGTGCCAATTTGTAGG+CGG | - | chr7_3:61905979-61905998 | Msa1114870:intron | 45.0% | |
| TGGGAAAACCGCCTACAAAT+TGG | + | chr7_3:61905990-61906009 | None:intergenic | 45.0% | |
| ! | GTTTTCCCACAAGTGTCTGA+TGG | - | chr7_3:61906001-61906020 | Msa1114870:intron | 45.0% |
| GTATCCCATCAGACACTTGT+GGG | + | chr7_3:61906009-61906028 | None:intergenic | 45.0% | |
| TGTATCCCATCAGACACTTG+TGG | + | chr7_3:61906010-61906029 | None:intergenic | 45.0% | |
| ACAACTTTACTGTTGCGCCA+AGG | + | chr7_3:61906244-61906263 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr7_3:61906273-61906292 | Msa1114870:intron | 45.0% | |
| AATCAAGCACTTGGAGTTGG+AGG | - | chr7_3:61906397-61906416 | Msa1114870:intron | 45.0% | |
| ATCAAGCACTTGGAGTTGGA+GGG | - | chr7_3:61906398-61906417 | Msa1114870:intron | 45.0% | |
| !! | AGACATTTCTGAGGCACACA+TGG | + | chr7_3:61906525-61906544 | None:intergenic | 45.0% |
| ATACACATCGAAAAGGAGGG+GGG | + | chr7_3:61906840-61906859 | None:intergenic | 45.0% | |
| CAATAACCTCCAACTTCACC+TGG | + | chr7_3:61906954-61906973 | None:intergenic | 45.0% | |
| CTTTGCCCACAAAAGCAAAG+TGG | - | chr7_3:61907186-61907205 | Msa1114870:intron | 45.0% | |
| GACCCTTTCCCCAAGTTAAA+TGG | - | chr7_3:61907226-61907245 | Msa1114870:CDS | 45.0% | |
| TTTCAAGGTGCAAGAAAGCC+TGG | - | chr7_3:61907296-61907315 | Msa1114870:intron | 45.0% | |
| AAGAAAGCCTGGCAATAGCA+GGG | - | chr7_3:61907307-61907326 | Msa1114870:intron | 45.0% | |
| TCAGTGATTTCCACTTCCAC+TGG | + | chr7_3:61907533-61907552 | None:intergenic | 45.0% | |
| !! | AAATAAATGTATAAATAAAA+AGG | - | chr7_3:61905944-61905963 | Msa1114870:intron | 5.0% |
| !! | AATAAATGTATAAATAAAAA+GGG | - | chr7_3:61905945-61905964 | Msa1114870:intron | 5.0% |
| ! | ATGAAACGGCGTCGGAGAAA+CGG | + | chr7_3:61901815-61901834 | None:intergenic | 50.0% |
| AGAGAGAAGGAAGTGGGAGT+TGG | + | chr7_3:61901880-61901899 | None:intergenic | 50.0% | |
| GTCGATTGAAGTCGTTGACG+AGG | + | chr7_3:61901920-61901939 | None:intergenic | 50.0% | |
| TTCGTAATTGGGAATCCGCG+TGG | - | chr7_3:61902172-61902191 | Msa1114870:exon | 50.0% | |
| TCGTAATTGGGAATCCGCGT+GGG | - | chr7_3:61902173-61902192 | Msa1114870:exon | 50.0% | |
| ACTAAATCCCACCCGAGTGT+TGG | + | chr7_3:61903254-61903273 | None:intergenic | 50.0% | |
| GGTGGGATTTAGTCCCACAT+CGG | - | chr7_3:61903261-61903280 | Msa1114870:intron | 50.0% | |
| CCGTACAAGCCTGTCTTGTA+AGG | - | chr7_3:61903331-61903350 | Msa1114870:intron | 50.0% | |
| CCAGCACCTTTCAACTTCTC+AGG | + | chr7_3:61903540-61903559 | None:intergenic | 50.0% | |
| ! | CCTGAGAAGTTGAAAGGTGC+TGG | - | chr7_3:61903537-61903556 | Msa1114870:intron | 50.0% |
| TCCTTCGAGCGAAACCACTT+GGG | + | chr7_3:61903635-61903654 | None:intergenic | 50.0% | |
| TCGCTCGAAGGAGTTTGAGA+AGG | - | chr7_3:61903643-61903662 | Msa1114870:intron | 50.0% | |
| ACGCACAGAGTCACATAGCA+CGG | - | chr7_3:61903885-61903904 | Msa1114870:intron | 50.0% | |
| ! | CACGCTTAGCACCTTTTACC+TGG | + | chr7_3:61904318-61904337 | None:intergenic | 50.0% |
| GAGTGCTATAAACCCCCGAT+AGG | + | chr7_3:61904412-61904431 | None:intergenic | 50.0% | |
| CCACTCCTCTTTACTAGGGT+AGG | + | chr7_3:61905490-61905509 | None:intergenic | 50.0% | |
| CCTACCCTAGTAAAGAGGAG+TGG | - | chr7_3:61905487-61905506 | Msa1114870:intron | 50.0% | |
| ATTGCCCAATCACAGGCTCT+TGG | - | chr7_3:61905696-61905715 | Msa1114870:intron | 50.0% | |
| CTTCTCCAAGAGCCTGTGAT+TGG | + | chr7_3:61905704-61905723 | None:intergenic | 50.0% | |
| TTTCCACTCTCTCTATGGGG+GGG | - | chr7_3:61905770-61905789 | Msa1114870:intron | 50.0% | |
| ACCGCCTACAAATTGGCACT+TGG | + | chr7_3:61905983-61906002 | None:intergenic | 50.0% | |
| CATACACAGGGTTCGGGAAT+GGG | + | chr7_3:61906304-61906323 | None:intergenic | 50.0% | |
| ATTCCCGAACCCTGTGTATG+CGG | - | chr7_3:61906304-61906323 | Msa1114870:intron | 50.0% | |
| CAAAAGCTCCCGCATACACA+GGG | + | chr7_3:61906316-61906335 | None:intergenic | 50.0% | |
| ACAAAAGCTCCCGCATACAC+AGG | + | chr7_3:61906317-61906336 | None:intergenic | 50.0% | |
| AGTGCAGACCGAAGAAGTTG+AGG | + | chr7_3:61906614-61906633 | None:intergenic | 50.0% | |
| GTCTGCACTCCAATATCACG+AGG | - | chr7_3:61906625-61906644 | Msa1114870:intron | 50.0% | |
| CACTCCAATATCACGAGGAC+TGG | - | chr7_3:61906630-61906649 | Msa1114870:intron | 50.0% | |
| TACACATCGAAAAGGAGGGG+GGG | + | chr7_3:61906839-61906858 | None:intergenic | 50.0% | |
| CAAGAAAGCCTGGCAATAGC+AGG | - | chr7_3:61907306-61907325 | Msa1114870:intron | 50.0% | |
| TGAAAGGGTTCTTCGGCCAT+AGG | - | chr7_3:61907338-61907357 | Msa1114870:intron | 50.0% | |
| ATAAGGGCTACCAGTGGAAG+TGG | - | chr7_3:61907520-61907539 | Msa1114870:CDS | 50.0% | |
| GGCGAGAGAGAGAAGGAAGT+GGG | + | chr7_3:61901886-61901905 | None:intergenic | 55.0% | |
| ! | GTTGACGAGGATGAGAGCGT+CGG | + | chr7_3:61901907-61901926 | None:intergenic | 55.0% |
| TACAGCTTCAAGAGCCCACG+CGG | + | chr7_3:61902190-61902209 | None:intergenic | 55.0% | |
| CACTGTTAGCGGCCAACACT+CGG | - | chr7_3:61903239-61903258 | Msa1114870:intron | 55.0% | |
| ACTGTTAGCGGCCAACACTC+GGG | - | chr7_3:61903240-61903259 | Msa1114870:intron | 55.0% | |
| CAAGACAGGCTTGTACGGTG+AGG | + | chr7_3:61903329-61903348 | None:intergenic | 55.0% | |
| ACCCAAGTGGTTTCGCTCGA+AGG | - | chr7_3:61903631-61903650 | Msa1114870:intron | 55.0% | |
| CTCCTTCGAGCGAAACCACT+TGG | + | chr7_3:61903636-61903655 | None:intergenic | 55.0% | |
| TGACTCTGTGCGTGTCTGTG+GGG | + | chr7_3:61903878-61903897 | None:intergenic | 55.0% | |
| GTGACTCTGTGCGTGTCTGT+GGG | + | chr7_3:61903879-61903898 | None:intergenic | 55.0% | |
| TGTGACTCTGTGCGTGTCTG+TGG | + | chr7_3:61903880-61903899 | None:intergenic | 55.0% | |
| CGGGAATGGGTCCAACCATT+TGG | + | chr7_3:61906291-61906310 | None:intergenic | 55.0% | |
| GCATACACAGGGTTCGGGAA+TGG | + | chr7_3:61906305-61906324 | None:intergenic | 55.0% | |
| TTCCCGAACCCTGTGTATGC+GGG | - | chr7_3:61906305-61906324 | Msa1114870:intron | 55.0% | |
| ! | ATGCGGGAGCTTTTGTGCAC+CGG | - | chr7_3:61906321-61906340 | Msa1114870:intron | 55.0% |
| GGGGCGATCCTCAACTTCTT+CGG | - | chr7_3:61906603-61906622 | Msa1114870:intron | 55.0% | |
| TCACCTGGTGAGCTCTGCTT+GGG | + | chr7_3:61906939-61906958 | None:intergenic | 55.0% | |
| TTCACCTGGTGAGCTCTGCT+TGG | + | chr7_3:61906940-61906959 | None:intergenic | 55.0% | |
| CAGAGCTCACCAGGTGAAGT+TGG | - | chr7_3:61906942-61906961 | Msa1114870:intron | 55.0% | |
| AGCTCACCAGGTGAAGTTGG+AGG | - | chr7_3:61906945-61906964 | Msa1114870:intron | 55.0% | |
| CGGCGAGAGAGAGAAGGAAG+TGG | + | chr7_3:61901887-61901906 | None:intergenic | 60.0% | |
| TTAGCGGCCAACACTCGGGT+GGG | - | chr7_3:61903244-61903263 | Msa1114870:intron | 60.0% | |
| ACTCTGTGCGTGTCTGTGGG+GGG | + | chr7_3:61903876-61903895 | None:intergenic | 60.0% | |
| GACTCTGTGCGTGTCTGTGG+GGG | + | chr7_3:61903877-61903896 | None:intergenic | 60.0% | |
| GTACCCCCCCATAGAGAGAG+TGG | + | chr7_3:61905776-61905795 | None:intergenic | 60.0% | |
| CTCCCGCATACACAGGGTTC+GGG | + | chr7_3:61906310-61906329 | None:intergenic | 60.0% | |
| GCTCCCGCATACACAGGGTT+CGG | + | chr7_3:61906311-61906330 | None:intergenic | 60.0% | |
| ATCGAAAAGGAGGGGGGGCA+AGG | + | chr7_3:61906834-61906853 | None:intergenic | 60.0% | |
| AGACCCAAGCAGAGCTCACC+AGG | - | chr7_3:61906933-61906952 | Msa1114870:intron | 60.0% | |
| ! | CGGCGTCGGAGAAACGGTTG+AGG | + | chr7_3:61901809-61901828 | None:intergenic | 65.0% |
| !! | GAGCGTCGGCGAGAGAGAGA+AGG | + | chr7_3:61901893-61901912 | None:intergenic | 65.0% |
| GTTAGCGGCCAACACTCGGG+TGG | - | chr7_3:61903243-61903262 | Msa1114870:intron | 65.0% | |
| TGTGCGTGTCTGTGGGGGGA+GGG | + | chr7_3:61903872-61903891 | None:intergenic | 65.0% | |
| GTGCGTGTCTGTGGGGGGAG+GGG | + | chr7_3:61903871-61903890 | None:intergenic | 70.0% | |
| CTGTGCGTGTCTGTGGGGGG+AGG | + | chr7_3:61903873-61903892 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 61901739 | 61907716 | 61901739 | ID=Msa1114870;Name=Msa1114870 |
| chr7_3 | mRNA | 61901739 | 61907716 | 61901739 | ID=Msa1114870-mRNA-1;Parent=Msa1114870;Name=Msa1114870-mRNA-1;_AED=0.07;_eAED=0.07;_QI=20|1|1|1|1|1|12|449|414 |
| chr7_3 | exon | 61901739 | 61902319 | 61901739 | ID=Msa1114870-mRNA-1:exon:14254;Parent=Msa1114870-mRNA-1 |
| chr7_3 | exon | 61902438 | 61902543 | 61902438 | ID=Msa1114870-mRNA-1:exon:14253;Parent=Msa1114870-mRNA-1 |
| chr7_3 | exon | 61902642 | 61902716 | 61902642 | ID=Msa1114870-mRNA-1:exon:14252;Parent=Msa1114870-mRNA-1 |
| chr7_3 | exon | 61902804 | 61902880 | 61902804 | ID=Msa1114870-mRNA-1:exon:14251;Parent=Msa1114870-mRNA-1 |
| chr7_3 | exon | 61903717 | 61903804 | 61903717 | ID=Msa1114870-mRNA-1:exon:14250;Parent=Msa1114870-mRNA-1 |
| chr7_3 | exon | 61904265 | 61904326 | 61904265 | ID=Msa1114870-mRNA-1:exon:14249;Parent=Msa1114870-mRNA-1 |
| chr7_3 | exon | 61904634 | 61904690 | 61904634 | ID=Msa1114870-mRNA-1:exon:14248;Parent=Msa1114870-mRNA-1 |
| chr7_3 | exon | 61904797 | 61904889 | 61904797 | ID=Msa1114870-mRNA-1:exon:14247;Parent=Msa1114870-mRNA-1 |
| chr7_3 | exon | 61905071 | 61905136 | 61905071 | ID=Msa1114870-mRNA-1:exon:14246;Parent=Msa1114870-mRNA-1 |
| chr7_3 | exon | 61905862 | 61905951 | 61905862 | ID=Msa1114870-mRNA-1:exon:14245;Parent=Msa1114870-mRNA-1 |
| chr7_3 | exon | 61907207 | 61907300 | 61907207 | ID=Msa1114870-mRNA-1:exon:14244;Parent=Msa1114870-mRNA-1 |
| chr7_3 | exon | 61907392 | 61907716 | 61907392 | ID=Msa1114870-mRNA-1:exon:14243;Parent=Msa1114870-mRNA-1 |
| chr7_3 | five_prime_UTR | 61907697 | 61907716 | 61907697 | ID=Msa1114870-mRNA-1:five_prime_utr;Parent=Msa1114870-mRNA-1 |
| chr7_3 | CDS | 61907392 | 61907696 | 61907392 | ID=Msa1114870-mRNA-1:cds;Parent=Msa1114870-mRNA-1 |
| chr7_3 | CDS | 61907207 | 61907300 | 61907207 | ID=Msa1114870-mRNA-1:cds;Parent=Msa1114870-mRNA-1 |
| chr7_3 | CDS | 61905862 | 61905951 | 61905862 | ID=Msa1114870-mRNA-1:cds;Parent=Msa1114870-mRNA-1 |
| chr7_3 | CDS | 61905071 | 61905136 | 61905071 | ID=Msa1114870-mRNA-1:cds;Parent=Msa1114870-mRNA-1 |
| chr7_3 | CDS | 61904797 | 61904889 | 61904797 | ID=Msa1114870-mRNA-1:cds;Parent=Msa1114870-mRNA-1 |
| chr7_3 | CDS | 61904634 | 61904690 | 61904634 | ID=Msa1114870-mRNA-1:cds;Parent=Msa1114870-mRNA-1 |
| chr7_3 | CDS | 61904265 | 61904326 | 61904265 | ID=Msa1114870-mRNA-1:cds;Parent=Msa1114870-mRNA-1 |
| chr7_3 | CDS | 61903717 | 61903804 | 61903717 | ID=Msa1114870-mRNA-1:cds;Parent=Msa1114870-mRNA-1 |
| chr7_3 | CDS | 61902804 | 61902880 | 61902804 | ID=Msa1114870-mRNA-1:cds;Parent=Msa1114870-mRNA-1 |
| chr7_3 | CDS | 61902642 | 61902716 | 61902642 | ID=Msa1114870-mRNA-1:cds;Parent=Msa1114870-mRNA-1 |
| chr7_3 | CDS | 61902438 | 61902543 | 61902438 | ID=Msa1114870-mRNA-1:cds;Parent=Msa1114870-mRNA-1 |
| chr7_3 | CDS | 61902188 | 61902319 | 61902188 | ID=Msa1114870-mRNA-1:cds;Parent=Msa1114870-mRNA-1 |
| chr7_3 | three_prime_UTR | 61901739 | 61902187 | 61901739 | ID=Msa1114870-mRNA-1:three_prime_utr;Parent=Msa1114870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
