Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1161920 | XP_013449617.1 | 98.551 | 414 | 6 | 0 | 1 | 414 | 1 | 414 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1161920 | sp|Q8GWE6|EER5_ARATH | 76.087 | 414 | 98 | 1 | 1 | 414 | 1 | 413 | 0.0 | 642 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1161920 | A0A072UCR5 | 98.551 | 414 | 6 | 0 | 1 | 414 | 1 | 414 | 0.0 | 840 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012710 | Msa1161920 | 0.805558 | 1.259912e-49 | -8.615850e-47 |
| Msa0015670 | Msa1161920 | 0.809603 | 1.744054e-50 | -8.615850e-47 |
| Msa0017320 | Msa1161920 | 0.813995 | 1.930031e-51 | -8.615850e-47 |
| Msa0043500 | Msa1161920 | 0.847837 | 8.978737e-60 | -8.615850e-47 |
| Msa0043650 | Msa1161920 | 0.847657 | 1.006477e-59 | -8.615850e-47 |
| Msa0045550 | Msa1161920 | 0.849684 | 2.761286e-60 | -8.615850e-47 |
| Msa0054820 | Msa1161920 | 0.803627 | 3.185597e-49 | -8.615850e-47 |
| Msa0092410 | Msa1161920 | 0.819176 | 1.332519e-52 | -8.615850e-47 |
| Msa0616450 | Msa1161920 | 0.804164 | 2.463336e-49 | -8.615850e-47 |
| Msa0658680 | Msa1161920 | 0.823079 | 1.679879e-53 | -8.615850e-47 |
| Msa0697590 | Msa1161920 | 0.802534 | 5.361442e-49 | -8.615850e-47 |
| Msa0698440 | Msa1161920 | 0.816302 | 5.931641e-52 | -8.615850e-47 |
| Msa0705390 | Msa1161920 | 0.809115 | 2.218816e-50 | -8.615850e-47 |
| Msa0705990 | Msa1161920 | 0.804500 | 2.097114e-49 | -8.615850e-47 |
| Msa0709120 | Msa1161920 | 0.813880 | 2.045922e-51 | -8.615850e-47 |
| Msa0721340 | Msa1161920 | 0.804688 | 1.915331e-49 | -8.615850e-47 |
| Msa0758250 | Msa1161920 | 0.816451 | 5.494408e-52 | -8.615850e-47 |
| Msa0763920 | Msa1161920 | 0.803721 | 3.045008e-49 | -8.615850e-47 |
| Msa0794210 | Msa1161920 | 0.806204 | 9.212831e-50 | -8.615850e-47 |
| Msa0809140 | Msa1161920 | 0.812972 | 3.240094e-51 | -8.615850e-47 |
| Msa0812950 | Msa1161920 | 0.806116 | 9.614932e-50 | -8.615850e-47 |
| Msa0136630 | Msa1161920 | 0.813607 | 2.349768e-51 | -8.615850e-47 |
| Msa0139670 | Msa1161920 | 0.815721 | 7.994706e-52 | -8.615850e-47 |
| Msa0152560 | Msa1161920 | 0.801479 | 8.831533e-49 | -8.615850e-47 |
| Msa0171980 | Msa1161920 | 0.814006 | 1.919202e-51 | -8.615850e-47 |
| Msa0187490 | Msa1161920 | 0.813142 | 2.972953e-51 | -8.615850e-47 |
| Msa0187830 | Msa1161920 | 0.810486 | 1.125617e-50 | -8.615850e-47 |
| Msa0236070 | Msa1161920 | 0.801830 | 7.483160e-49 | -8.615850e-47 |
| Msa0364790 | Msa1161920 | 0.806004 | 1.015330e-49 | -8.615850e-47 |
| Msa0378970 | Msa1161920 | 0.805346 | 1.395557e-49 | -8.615850e-47 |
| Msa0380600 | Msa1161920 | 0.806869 | 6.670365e-50 | -8.615850e-47 |
| Msa0382370 | Msa1161920 | 0.802619 | 5.147788e-49 | -8.615850e-47 |
| Msa0387050 | Msa1161920 | 0.826518 | 2.596076e-54 | -8.615850e-47 |
| Msa0403490 | Msa1161920 | 0.832830 | 7.557386e-56 | -8.615850e-47 |
| Msa0422180 | Msa1161920 | 0.836714 | 7.959452e-57 | -8.615850e-47 |
| Msa0427580 | Msa1161920 | 0.811022 | 8.616611e-51 | -8.615850e-47 |
| Msa0430060 | Msa1161920 | 0.830070 | 3.611377e-55 | -8.615850e-47 |
| Msa0430150 | Msa1161920 | 0.826563 | 2.533299e-54 | -8.615850e-47 |
| Msa0430240 | Msa1161920 | 0.805987 | 1.023426e-49 | -8.615850e-47 |
| Msa0474940 | Msa1161920 | 0.801206 | 1.004434e-48 | -8.615850e-47 |
| Msa0476680 | Msa1161920 | 0.802110 | 6.552700e-49 | -8.615850e-47 |
| Msa0480780 | Msa1161920 | 0.800620 | 1.322964e-48 | -8.615850e-47 |
| Msa0481030 | Msa1161920 | 0.805380 | 1.372845e-49 | -8.615850e-47 |
| Msa0481280 | Msa1161920 | 0.808396 | 3.161172e-50 | -8.615850e-47 |
| Msa0992600 | Msa1161920 | 0.815719 | 8.005047e-52 | -8.615850e-47 |
| Msa1011090 | Msa1161920 | 0.804845 | 1.776763e-49 | -8.615850e-47 |
| Msa1034590 | Msa1161920 | 0.836429 | 9.405526e-57 | -8.615850e-47 |
| Msa1034700 | Msa1161920 | 0.809239 | 2.087717e-50 | -8.615850e-47 |
| Msa1074350 | Msa1161920 | 0.805152 | 1.532379e-49 | -8.615850e-47 |
| Msa0240270 | Msa1161920 | 0.822531 | 2.253277e-53 | -8.615850e-47 |
| Msa0262370 | Msa1161920 | 0.817194 | 3.742805e-52 | -8.615850e-47 |
| Msa0269560 | Msa1161920 | 0.811440 | 6.992509e-51 | -8.615850e-47 |
| Msa0300150 | Msa1161920 | 0.826158 | 3.162093e-54 | -8.615850e-47 |
| Msa0304840 | Msa1161920 | 0.803094 | 4.107226e-49 | -8.615850e-47 |
| Msa0341230 | Msa1161920 | 0.809476 | 1.857281e-50 | -8.615850e-47 |
| Msa0347950 | Msa1161920 | 0.819487 | 1.131852e-52 | -8.615850e-47 |
| Msa0347990 | Msa1161920 | 0.823075 | 1.683389e-53 | -8.615850e-47 |
| Msa1114870 | Msa1161920 | 0.916469 | 1.715861e-85 | -8.615850e-47 |
| Msa1126240 | Msa1161920 | 0.815799 | 7.680607e-52 | -8.615850e-47 |
| Msa1127430 | Msa1161920 | 0.801380 | 9.254274e-49 | -8.615850e-47 |
| Msa1143020 | Msa1161920 | 0.838981 | 2.081736e-57 | -8.615850e-47 |
| Msa1144040 | Msa1161920 | 0.816040 | 6.787639e-52 | -8.615850e-47 |
| Msa1158390 | Msa1161920 | 0.809577 | 1.766084e-50 | -8.615850e-47 |
| Msa1161920 | Msa1183140 | 0.811042 | 8.533438e-51 | -8.615850e-47 |
| Msa1161920 | Msa1209190 | 0.825252 | 5.188540e-54 | -8.615850e-47 |
| Msa1161920 | Msa1209860 | 0.810353 | 1.202095e-50 | -8.615850e-47 |
| Msa1161920 | Msa1214170 | 0.816995 | 4.148772e-52 | -8.615850e-47 |
| Msa1161920 | Msa1225600 | 0.802438 | 5.610610e-49 | -8.615850e-47 |
| Msa1161920 | Msa1234620 | 0.825473 | 4.598194e-54 | -8.615850e-47 |
| Msa1161920 | Msa1253660 | 0.804262 | 2.350165e-49 | -8.615850e-47 |
| Msa1161920 | Msa1260680 | 0.802937 | 4.426857e-49 | -8.615850e-47 |
| Msa1161920 | Msa1309760 | 0.808774 | 2.624728e-50 | -8.615850e-47 |
| Msa1161920 | Msa1332050 | 0.841100 | 5.830302e-58 | -8.615850e-47 |
| Msa1161920 | Msa1341490 | 0.811622 | 6.385889e-51 | -8.615850e-47 |
| Msa1161920 | Msa1349450 | 0.800472 | 1.418325e-48 | -8.615850e-47 |
| Msa1161920 | Msa1359560 | 0.813763 | 2.171174e-51 | -8.615850e-47 |
| Msa1161920 | Msa1360020 | 0.810581 | 1.073281e-50 | -8.615850e-47 |
| Msa1161920 | Msa1366550 | 0.818739 | 1.675039e-52 | -8.615850e-47 |
| Msa1161920 | Msa1368360 | 0.808062 | 3.724776e-50 | -8.615850e-47 |
| Msa1161920 | Msa1369920 | -0.806323 | 8.697089e-50 | -8.615850e-47 |
| Msa1161920 | Msa1395730 | 0.803966 | 2.709157e-49 | -8.615850e-47 |
| Msa1161920 | Msa1412130 | 0.802302 | 5.985189e-49 | -8.615850e-47 |
| Msa1161920 | Msa1413380 | 0.809500 | 1.835440e-50 | -8.615850e-47 |
| Msa1161920 | Msa1426570 | 0.801900 | 7.238553e-49 | -8.615850e-47 |
| Msa1161920 | Msa1430550 | 0.821021 | 5.037804e-53 | -8.615850e-47 |
| Msa1161920 | Msa1444120 | 0.800253 | 1.572045e-48 | -8.615850e-47 |
| Msa1161920 | Msa1463030 | 0.825145 | 5.499883e-54 | -8.615850e-47 |
| Msa0500470 | Msa1161920 | 0.807411 | 5.120692e-50 | -8.615850e-47 |
| Msa0514610 | Msa1161920 | 0.851118 | 1.092608e-60 | -8.615850e-47 |
| Msa0518170 | Msa1161920 | 0.815132 | 1.081262e-51 | -8.615850e-47 |
| Msa0521010 | Msa1161920 | 0.802392 | 5.732596e-49 | -8.615850e-47 |
| Msa0544170 | Msa1161920 | 0.811225 | 7.787158e-51 | -8.615850e-47 |
| Msa0544730 | Msa1161920 | 0.800125 | 1.668559e-48 | -8.615850e-47 |
| Msa0569780 | Msa1161920 | 0.807423 | 5.091463e-50 | -8.615850e-47 |
| Msa0581400 | Msa1161920 | 0.805667 | 1.195058e-49 | -8.615850e-47 |
| Msa0600070 | Msa1161920 | 0.814243 | 1.700954e-51 | -8.615850e-47 |
| Msa0865970 | Msa1161920 | 0.825356 | 4.901350e-54 | -8.615850e-47 |
| Msa0866070 | Msa1161920 | 0.820967 | 5.184531e-53 | -8.615850e-47 |
| Msa0945240 | Msa1161920 | 0.801749 | 7.776095e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1161920 | MtrunA17_Chr7g0257591 | 98.551 | 414 | 6 | 0 | 1 | 414 | 1 | 414 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1161920 | AT2G19560.1 | 76.087 | 414 | 98 | 1 | 1 | 414 | 1 | 413 | 0.0 | 642 |
| Msa1161920 | AT2G19560.2 | 80.573 | 314 | 60 | 1 | 101 | 414 | 2 | 314 | 0.0 | 522 |
Find 100 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATTCAAGATTTACTTTA+AGG | 0.080216 | 7_4:-52277642 | Msa1161920:intron |
| ACGTTGTTGCTTATGAAATT+AGG | 0.153786 | 7_4:-52279815 | Msa1161920:CDS |
| CGTTGTTGCTTATGAAATTA+GGG | 0.224210 | 7_4:-52279814 | Msa1161920:CDS |
| GACCCTTTCCCCAAGTTAAA+TGG | 0.224511 | 7_4:-52274780 | Msa1161920:CDS |
| GTTATAGGCTTCAACGAAAT+TGG | 0.231468 | 7_4:+52280005 | None:intergenic |
| ATATTGTACAAGCTCTAAAA+AGG | 0.257192 | 7_4:-52275424 | Msa1161920:CDS |
| TTGTTCAGGAATTTCGTAAT+TGG | 0.261819 | 7_4:-52279866 | Msa1161920:CDS |
| TTGATTGTATTCCAGGTAAA+AGG | 0.270860 | 7_4:-52277701 | Msa1161920:intron |
| ATTCTAACCTTGTCTCTATT+AGG | 0.271778 | 7_4:+52277361 | None:intergenic |
| TTTACCAGTCCTCGTGATAT+TGG | 0.284705 | 7_4:+52275372 | None:intergenic |
| ACCAGAATTAAACCTTATAT+TGG | 0.293079 | 7_4:+52276825 | None:intergenic |
| CACCTTGAAATTTAGAATCA+TGG | 0.325148 | 7_4:+52274723 | None:intergenic |
| TAATAACTTAAACAAATTAC+AGG | 0.345456 | 7_4:+52274361 | None:intergenic |
| AACAGCATGAAGCCAATATA+AGG | 0.349869 | 7_4:-52276837 | Msa1161920:intron |
| AAATTCCTCAAAATCAAATA+TGG | 0.357145 | 7_4:+52277384 | None:intergenic |
| ATTTGAGAGAGATGCCGTTT+TGG | 0.366232 | 7_4:+52280190 | None:intergenic |
| GGAGAAACGGTTGAGGTATT+CGG | 0.366603 | 7_4:+52280227 | None:intergenic |
| TTTAACAACAAGAACACATT+CGG | 0.371266 | 7_4:+52274619 | None:intergenic |
| TTCACCTGGTGAGCTCTGCT+TGG | 0.378378 | 7_4:+52275069 | None:intergenic |
| TGGTTTAGTTTCCACTTGTA+TGG | 0.384486 | 7_4:-52274520 | Msa1161920:three_prime_UTR |
| TGTTCAGGAATTTCGTAATT+GGG | 0.401599 | 7_4:-52279865 | Msa1161920:CDS |
| AATTAGGGTTCTTGCTGAAA+AGG | 0.406313 | 7_4:-52279799 | Msa1161920:intron |
| AAGATTCTTGTGTATCAGTA+TGG | 0.406611 | 7_4:+52274854 | None:intergenic |
| CAGAGCTCACCAGGTGAAGT+TGG | 0.407918 | 7_4:-52275064 | Msa1161920:CDS |
| TCACTAGTGAACCACATGTT+AGG | 0.410487 | 7_4:+52274387 | None:intergenic |
| TTAACAACAAGAACACATTC+GGG | 0.415211 | 7_4:+52274620 | None:intergenic |
| TTCCATTTAACTTGGGGAAA+GGG | 0.416354 | 7_4:+52274778 | None:intergenic |
| AGAGAGAAGGAAGTGGGAGT+TGG | 0.416612 | 7_4:+52280149 | None:intergenic |
| ATTCCAGTGAAGCTTTCAAT+AGG | 0.418462 | 7_4:-52276336 | Msa1161920:CDS |
| CTTCTCCAAGAGCCTGTGAT+TGG | 0.422456 | 7_4:+52276305 | None:intergenic |
| GACAGACAATTGGCTGCAAA+TGG | 0.428454 | 7_4:-52278498 | Msa1161920:CDS |
| ACATCTTCTTTACTAATCTC+TGG | 0.429870 | 7_4:+52275213 | None:intergenic |
| TCACCTGGTGAGCTCTGCTT+GGG | 0.437488 | 7_4:+52275070 | None:intergenic |
| GGAAAACCTGTCAATTCATA+AGG | 0.438899 | 7_4:-52274759 | Msa1161920:exon |
| CTGTTGGTTGCAATGCTTCA+AGG | 0.445629 | 7_4:+52276855 | None:intergenic |
| ACCCATGATTCTAAATTTCA+AGG | 0.446111 | 7_4:-52274725 | Msa1161920:three_prime_UTR |
| CCAGCACCTTTCAACTTCTC+AGG | 0.448793 | 7_4:+52278468 | None:intergenic |
| CAAGAAAGCCTGGCAATAGC+AGG | 0.449826 | 7_4:-52274700 | Msa1161920:three_prime_UTR |
| AGACCCAAGCAGAGCTCACC+AGG | 0.451286 | 7_4:-52275073 | Msa1161920:CDS |
| ATGCCTATTGAAAGCTTCAC+TGG | 0.454323 | 7_4:+52276333 | None:intergenic |
| TTCTCCAAGAGCCTGTGATT+GGG | 0.457016 | 7_4:+52276306 | None:intergenic |
| ACCTGTCAATTCATAAGGAC+TGG | 0.460956 | 7_4:-52274754 | Msa1161920:exon |
| ACCTTGAAATTTAGAATCAT+GGG | 0.461425 | 7_4:+52274724 | None:intergenic |
| GTCACTTACATGTACTATAC+TGG | 0.463654 | 7_4:-52277240 | Msa1161920:CDS |
| TCCAGTCCTTATGAATTGAC+AGG | 0.466979 | 7_4:+52274753 | None:intergenic |
| TGAAAGGGTTCTTCGGCCAT+AGG | 0.467348 | 7_4:-52274668 | Msa1161920:three_prime_UTR |
| GGGGCGATCCTCAACTTCTT+CGG | 0.477985 | 7_4:-52275403 | Msa1161920:CDS |
| AAGCTGATTAAACATTATGA+TGG | 0.483635 | 7_4:+52274330 | None:intergenic |
| TTATTGTTAAAGCATTGAAA+TGG | 0.486233 | 7_4:-52275038 | Msa1161920:CDS |
| CTTGAAGTTCTACCTTCTCT+AGG | 0.487820 | 7_4:+52275240 | None:intergenic |
| CCTGAGAAGTTGAAAGGTGC+TGG | 0.489843 | 7_4:-52278468 | Msa1161920:CDS |
| TTATATTGGCTTCATGCTGT+TGG | 0.491818 | 7_4:+52276839 | None:intergenic |
| TCAAACTTCAAAAGTGAAAG+TGG | 0.494508 | 7_4:+52280314 | None:intergenic |
| TATTCTTGCAATTTAGATTG+TGG | 0.494659 | 7_4:-52274540 | Msa1161920:three_prime_UTR |
| TGTTGAAGTGATCGGAAAAG+AGG | 0.496197 | 7_4:+52280039 | None:intergenic |
| ATTGCCCAATCACAGGCTCT+TGG | 0.498484 | 7_4:-52276310 | Msa1161920:CDS |
| TTTGCAGGTAGAGTGTATAA+TGG | 0.498834 | 7_4:-52274877 | Msa1161920:intron |
| ATAAGGGCTACCAGTGGAAG+TGG | 0.502554 | 7_4:-52274486 | Msa1161920:three_prime_UTR |
| TTCTTATTATACTGCGGCAA+AGG | 0.505154 | 7_4:+52277425 | None:intergenic |
| AAAATTACCCTGCTATTGCC+AGG | 0.512201 | 7_4:+52274692 | None:intergenic |
| TTTCCATTTAACTTGGGGAA+AGG | 0.515780 | 7_4:+52274777 | None:intergenic |
| GTTGCAATGCTTCAAGGCAT+AGG | 0.517547 | 7_4:+52276861 | None:intergenic |
| TTTCAAGGTGCAAGAAAGCC+TGG | 0.518143 | 7_4:-52274710 | Msa1161920:three_prime_UTR |
| GTTTATAGTGTTGAAGTGAT+CGG | 0.519681 | 7_4:+52280031 | None:intergenic |
| CAATAACCTCCAACTTCACC+TGG | 0.530433 | 7_4:+52275055 | None:intergenic |
| AACAATGGCGTATTTGAGCA+TGG | 0.533509 | 7_4:-52280271 | Msa1161920:exon |
| ATGAAACGGCGTCGGAGAAA+CGG | 0.534306 | 7_4:+52280214 | None:intergenic |
| CATTCAATACAACAAACCTA+TGG | 0.536093 | 7_4:+52274652 | None:intergenic |
| TCAGTGATTTCCACTTCCAC+TGG | 0.541890 | 7_4:+52274476 | None:intergenic |
| CGGCGAGAGAGAGAAGGAAG+TGG | 0.544385 | 7_4:+52280142 | None:intergenic |
| CACTCCAATATCACGAGGAC+TGG | 0.550692 | 7_4:-52275376 | Msa1161920:intron |
| AAAACATACAACCATACAAG+TGG | 0.554205 | 7_4:+52274509 | None:intergenic |
| AATTGACATGGATGTGGATG+AGG | 0.555159 | 7_4:-52275010 | Msa1161920:intron |
| TAGGCATATTGCCCAATCAC+AGG | 0.563533 | 7_4:-52276317 | Msa1161920:CDS |
| GCTTGAAATTGACATGGATG+TGG | 0.568571 | 7_4:-52275016 | Msa1161920:CDS |
| GTAAAAGGTGCTAAGCGTGT+TGG | 0.576657 | 7_4:-52277686 | Msa1161920:CDS |
| GGCGAGAGAGAGAAGGAAGT+GGG | 0.582230 | 7_4:+52280143 | None:intergenic |
| CAATACTTCTTATTATACTG+CGG | 0.586087 | 7_4:+52277419 | None:intergenic |
| AGCTCACCAGGTGAAGTTGG+AGG | 0.588477 | 7_4:-52275061 | Msa1161920:CDS |
| ACAATGGCGTATTTGAGCAT+GGG | 0.590947 | 7_4:-52280270 | Msa1161920:CDS |
| AAATCTCCTGAGAAGTTGAA+AGG | 0.593067 | 7_4:-52278474 | Msa1161920:CDS |
| CGGCGTCGGAGAAACGGTTG+AGG | 0.594594 | 7_4:+52280220 | None:intergenic |
| AGTGCAGACCGAAGAAGTTG+AGG | 0.599498 | 7_4:+52275395 | None:intergenic |
| CTTTGCCCACAAAAGCAAAG+TGG | 0.605507 | 7_4:-52274820 | Msa1161920:CDS |
| GAGCGTCGGCGAGAGAGAGA+AGG | 0.610417 | 7_4:+52280136 | None:intergenic |
| TGTATATCTTGTCCTAGAGA+AGG | 0.611998 | 7_4:-52275252 | Msa1161920:CDS |
| ATACACAAGAATCTTGTGAA+AGG | 0.613044 | 7_4:-52274846 | Msa1161920:CDS |
| GTCGATTGAAGTCGTTGACG+AGG | 0.613533 | 7_4:+52280109 | None:intergenic |
| GACGCCGTTTCATACCAAAA+CGG | 0.616324 | 7_4:-52280204 | Msa1161920:CDS |
| TTCGTAATTGGGAATCCGCG+TGG | 0.623906 | 7_4:-52279854 | Msa1161920:CDS |
| CTTTCTTCGAAGATCAACAA+TGG | 0.631214 | 7_4:-52280286 | Msa1161920:intron |
| GGAGAAGTACAATCTACTTG+AGG | 0.637346 | 7_4:-52276289 | Msa1161920:intron |
| AAGAAAGCCTGGCAATAGCA+GGG | 0.645256 | 7_4:-52274699 | Msa1161920:three_prime_UTR |
| TACAGCTTCAAGAGCCCACG+CGG | 0.650017 | 7_4:+52279839 | None:intergenic |
| GGAATTTCCTAATAGAGACA+AGG | 0.655538 | 7_4:-52277368 | Msa1161920:intron |
| GTTGACGAGGATGAGAGCGT+CGG | 0.661085 | 7_4:+52280122 | None:intergenic |
| GAAATGGCTTGAAATTGACA+TGG | 0.673583 | 7_4:-52275022 | Msa1161920:CDS |
| TAACAACAAGAACACATTCG+GGG | 0.687381 | 7_4:+52274621 | None:intergenic |
| GTCTGCACTCCAATATCACG+AGG | 0.694419 | 7_4:-52275381 | Msa1161920:CDS |
| ACTACTGAGAACCTAACATG+TGG | 0.713877 | 7_4:-52274398 | Msa1161920:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTTTTTTTTTTCATTTT+CGG | - | chr7_4:52276123-52276142 | Msa1161920:intron | 10.0% |
| !! | TATCATAAAGATAAATAATA+TGG | + | chr7_4:52277385-52277404 | None:intergenic | 10.0% |
| !!! | TTTTGTTTAAAATTTTACAA+TGG | - | chr7_4:52278690-52278709 | Msa1161920:intron | 10.0% |
| !!! | TAAGTAATTATTTTTTCTTT+TGG | - | chr7_4:52279195-52279214 | Msa1161920:intron | 10.0% |
| !!! | TCATTTGATTTTATTTGAAT+TGG | - | chr7_4:52274710-52274729 | Msa1161920:three_prime_UTR | 15.0% |
| !!! | ATTTATACATTTATTTCTTC+TGG | + | chr7_4:52278589-52278608 | None:intergenic | 15.0% |
| !!! | TGTAAAATTTTAAACAAAAG+AGG | + | chr7_4:52278689-52278708 | None:intergenic | 15.0% |
| !! | AACTTAGCAAATTAAAAAAA+GGG | + | chr7_4:52278998-52279017 | None:intergenic | 15.0% |
| !! | AAACTTAGCAAATTAAAAAA+AGG | + | chr7_4:52278999-52279018 | None:intergenic | 15.0% |
| !!! | TTTTTTTAATTTGCTAAGTT+TGG | - | chr7_4:52278998-52279017 | Msa1161920:intron | 15.0% |
| !!! | ATTGAATTCATATTTTTTGT+AGG | - | chr7_4:52279364-52279383 | Msa1161920:intron | 15.0% |
| !! | ATCTTTCAAAAAACAAATAA+AGG | - | chr7_4:52279715-52279734 | Msa1161920:intron | 15.0% |
| !! | TAATAACTTAAACAAATTAC+AGG | + | chr7_4:52280295-52280314 | None:intergenic | 15.0% |
| !!! | TTTTATTGAAATTGAAGTGA+TGG | - | chr7_4:52274734-52274753 | Msa1161920:three_prime_UTR | 20.0% |
| !!! | ATTGATTCTAATTTGAAACT+AGG | - | chr7_4:52274917-52274936 | Msa1161920:intron | 20.0% |
| !! | AAAGTAAAGTGATTTATGTT+TGG | + | chr7_4:52275140-52275159 | None:intergenic | 20.0% |
| !!! | CAAAATTGATTCTCTAATTA+CGG | + | chr7_4:52275430-52275449 | None:intergenic | 20.0% |
| !! | ATGTAACACGATTTATATTT+GGG | + | chr7_4:52275514-52275533 | None:intergenic | 20.0% |
| !! | TATGTAACACGATTTATATT+TGG | + | chr7_4:52275515-52275534 | None:intergenic | 20.0% |
| !!! | TTTTTTTCATTTTCGGTTTT+AGG | - | chr7_4:52276130-52276149 | Msa1161920:intron | 20.0% |
| !!! | AAATCATTGACTGAAAATTT+GGG | + | chr7_4:52276704-52276723 | None:intergenic | 20.0% |
| !! | GTTATTCAAGATTTACTTTA+AGG | - | chr7_4:52277011-52277030 | Msa1161920:intron | 20.0% |
| !! | AAATTCCTCAAAATCAAATA+TGG | + | chr7_4:52277272-52277291 | None:intergenic | 20.0% |
| !! | TTATCTTTATGATATGTTTC+AGG | - | chr7_4:52277391-52277410 | Msa1161920:CDS | 20.0% |
| !! | AAATTTAGATTACTTACAGA+AGG | + | chr7_4:52277467-52277486 | None:intergenic | 20.0% |
| !!! | ATGTATTTTTCTTTTTTGAG+AGG | - | chr7_4:52277567-52277586 | Msa1161920:intron | 20.0% |
| !!! | TGTATTTTTCTTTTTTGAGA+GGG | - | chr7_4:52277568-52277587 | Msa1161920:intron | 20.0% |
| !! | ACAAATGTAAACTCTATAAA+TGG | + | chr7_4:52277746-52277765 | None:intergenic | 20.0% |
| !!! | AAATGGAAGTATTTATTAGT+AGG | - | chr7_4:52278056-52278075 | Msa1161920:intron | 20.0% |
| !!! | CTTAGTTTACTTTTATGATT+AGG | - | chr7_4:52278537-52278556 | Msa1161920:intron | 20.0% |
| !! | AAATATTATATCACAAAGAG+TGG | + | chr7_4:52278716-52278735 | None:intergenic | 20.0% |
| !!! | AGGTTTTGTTAAACTTTAAA+AGG | + | chr7_4:52278854-52278873 | None:intergenic | 20.0% |
| !!! | TAACAAAACCTTTTTTATTG+TGG | - | chr7_4:52278863-52278882 | Msa1161920:intron | 20.0% |
| !!! | TTATTGTTAAAGCATTGAAA+TGG | - | chr7_4:52279615-52279634 | Msa1161920:intron | 20.0% |
| !! | GATATAAACAAATTGAAAGT+AGG | + | chr7_4:52279698-52279717 | None:intergenic | 20.0% |
| !!! | TATGGTTGTATGTTTTATAA+GGG | - | chr7_4:52280151-52280170 | Msa1161920:CDS | 20.0% |
| !!! | ATTAACATGTATTTTTAGCT+CGG | - | chr7_4:52280209-52280228 | Msa1161920:CDS | 20.0% |
| ! | AAAGAATGAATCATACTTAG+TGG | + | chr7_4:52274687-52274706 | None:intergenic | 25.0% |
| ! | CAAATTCAATTCATTCAAAG+TGG | + | chr7_4:52275260-52275279 | None:intergenic | 25.0% |
| ! | CACTTTGAATGAATTGAATT+TGG | - | chr7_4:52275258-52275277 | Msa1161920:CDS | 25.0% |
| ! | ACATTCAACTCACTTTAAAT+CGG | + | chr7_4:52275295-52275314 | None:intergenic | 25.0% |
| !! | AAAGTAAGTTGAATGTTAAG+TGG | - | chr7_4:52275592-52275611 | Msa1161920:intron | 25.0% |
| !! | AATTTATGCTACTTGAAGTT+GGG | + | chr7_4:52275692-52275711 | None:intergenic | 25.0% |
| !!! | GAAATTGATTTTGTGATGTT+TGG | + | chr7_4:52275747-52275766 | None:intergenic | 25.0% |
| ! | TATACAAATGTTCAGTTCTA+CGG | + | chr7_4:52276012-52276031 | None:intergenic | 25.0% |
| !! | TTATATTTTGCTTCTCAGTT+TGG | - | chr7_4:52276061-52276080 | Msa1161920:intron | 25.0% |
| ! | ATTCACACTCAAATAAAAGA+AGG | + | chr7_4:52276102-52276121 | None:intergenic | 25.0% |
| !! | TCTTTACTCATGAAAGTTTT+TGG | - | chr7_4:52276209-52276228 | Msa1161920:intron | 25.0% |
| ! | CTTGGGTTTCAAATTAAAAT+AGG | + | chr7_4:52276266-52276285 | None:intergenic | 25.0% |
| !!! | ATTTTAATTTGAAACCCAAG+TGG | - | chr7_4:52276266-52276285 | Msa1161920:intron | 25.0% |
| ! | TTTGAAAAAGAGACCTAATT+GGG | + | chr7_4:52276391-52276410 | None:intergenic | 25.0% |
| !!! | TTTTGAAAAAGAGACCTAAT+TGG | + | chr7_4:52276392-52276411 | None:intergenic | 25.0% |
| !! | CAAATCATTGACTGAAAATT+TGG | + | chr7_4:52276705-52276724 | None:intergenic | 25.0% |
| !! | CAAATTTTCAGTCAATGATT+TGG | - | chr7_4:52276703-52276722 | Msa1161920:intron | 25.0% |
| ! | CAATACTTCTTATTATACTG+CGG | + | chr7_4:52277237-52277256 | None:intergenic | 25.0% |
| !!! | GTATTTTTCTTTTTTGAGAG+GGG | - | chr7_4:52277569-52277588 | Msa1161920:intron | 25.0% |
| ! | TGCAAATAATTTAAACCAGA+AGG | + | chr7_4:52277610-52277629 | None:intergenic | 25.0% |
| ! | ACCAGAATTAAACCTTATAT+TGG | + | chr7_4:52277831-52277850 | None:intergenic | 25.0% |
| ! | TAAATTTGCCTGCAAATTAA+AGG | - | chr7_4:52277905-52277924 | Msa1161920:intron | 25.0% |
| ! | TGCTTAGTGAATATTCTATT+TGG | - | chr7_4:52278022-52278041 | Msa1161920:intron | 25.0% |
| ! | TTAGTGAATATTCTATTTGG+TGG | - | chr7_4:52278025-52278044 | Msa1161920:intron | 25.0% |
| !!! | TAGGAATGTTTTTTACTAGT+GGG | - | chr7_4:52278075-52278094 | Msa1161920:intron | 25.0% |
| !! | TTGGATTTTGCAGTTTATAT+GGG | + | chr7_4:52278109-52278128 | None:intergenic | 25.0% |
| !! | TTTGGATTTTGCAGTTTATA+TGG | + | chr7_4:52278110-52278129 | None:intergenic | 25.0% |
| !! | AATTGGTAACATAAACATGA+TGG | + | chr7_4:52278776-52278795 | None:intergenic | 25.0% |
| ! | TTAGCAAATTAAAAAAAGGG+AGG | + | chr7_4:52278995-52279014 | None:intergenic | 25.0% |
| !!! | TTTTTCAAAAATCAAGCACT+TGG | - | chr7_4:52279035-52279054 | Msa1161920:intron | 25.0% |
| ! | ATTAGCAGTATAAACAGAAA+CGG | + | chr7_4:52279076-52279095 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTTTTGGACAGTA+CGG | - | chr7_4:52279204-52279223 | Msa1161920:intron | 25.0% |
| !!! | ATATTGTACAAGCTCTAAAA+AGG | - | chr7_4:52279229-52279248 | Msa1161920:intron | 25.0% |
| !!! | TATTGTACAAGCTCTAAAAA+GGG | - | chr7_4:52279230-52279249 | Msa1161920:intron | 25.0% |
| ! | TTAATATTTGATGCATTTGC+AGG | - | chr7_4:52279761-52279780 | Msa1161920:intron | 25.0% |
| !! | ACCTTGAAATTTAGAATCAT+GGG | + | chr7_4:52279932-52279951 | None:intergenic | 25.0% |
| ! | TTTAACAACAAGAACACATT+CGG | + | chr7_4:52280037-52280056 | None:intergenic | 25.0% |
| ! | TATTCTTGCAATTTAGATTG+TGG | - | chr7_4:52280113-52280132 | Msa1161920:CDS | 25.0% |
| !! | GTATGGTTGTATGTTTTATA+AGG | - | chr7_4:52280150-52280169 | Msa1161920:CDS | 25.0% |
| ! | AAGCTGATTAAACATTATGA+TGG | + | chr7_4:52280326-52280345 | None:intergenic | 25.0% |
| TCAAACTTCAAAAGTGAAAG+TGG | + | chr7_4:52274342-52274361 | None:intergenic | 30.0% | |
| ! | GTTTATAGTGTTGAAGTGAT+CGG | + | chr7_4:52274625-52274644 | None:intergenic | 30.0% |
| !!! | AGTGATGGATTTTAATGTTG+TGG | - | chr7_4:52274749-52274768 | Msa1161920:exon | 30.0% |
| TTGTTCAGGAATTTCGTAAT+TGG | - | chr7_4:52274787-52274806 | Msa1161920:CDS | 30.0% | |
| TGTTCAGGAATTTCGTAATT+GGG | - | chr7_4:52274788-52274807 | Msa1161920:CDS | 30.0% | |
| ! | ACGTTGTTGCTTATGAAATT+AGG | - | chr7_4:52274838-52274857 | Msa1161920:CDS | 30.0% |
| ! | CGTTGTTGCTTATGAAATTA+GGG | - | chr7_4:52274839-52274858 | Msa1161920:CDS | 30.0% |
| CAAAATAATCTGAACCAAAC+AGG | + | chr7_4:52274889-52274908 | None:intergenic | 30.0% | |
| AACTAAACACACACTATGTT+TGG | + | chr7_4:52275221-52275240 | None:intergenic | 30.0% | |
| !!! | ATAGTGTGTGTTTAGTTTTG+TGG | - | chr7_4:52275224-52275243 | Msa1161920:CDS | 30.0% |
| TTGCACACTAAGTTAATGTT+TGG | + | chr7_4:52275387-52275406 | None:intergenic | 30.0% | |
| !! | TTTGGTATCACTTTTGAAAG+AGG | + | chr7_4:52275453-52275472 | None:intergenic | 30.0% |
| !! | ATTTGTAGCTTTGAGTCTAA+AGG | + | chr7_4:52275669-52275688 | None:intergenic | 30.0% |
| ! | GAATTTATGCTACTTGAAGT+TGG | + | chr7_4:52275693-52275712 | None:intergenic | 30.0% |
| TCAAGTAGCATAAATTCTAG+AGG | - | chr7_4:52275696-52275715 | Msa1161920:intron | 30.0% | |
| TCAATATTTAGCACTGTTAG+CGG | - | chr7_4:52275853-52275872 | Msa1161920:intron | 30.0% | |
| AGTATGTTATGTTAGTAGCA+AGG | + | chr7_4:52276334-52276353 | None:intergenic | 30.0% | |
| ! | TGGGAATCAACTTTGTTTAA+AGG | + | chr7_4:52276372-52276391 | None:intergenic | 30.0% |
| ! | AACAAAGTTGATTCCCAATT+AGG | - | chr7_4:52276375-52276394 | Msa1161920:intron | 30.0% |
| ATGCATGAATAGGCTAAAAT+TGG | + | chr7_4:52276729-52276748 | None:intergenic | 30.0% | |
| ! | TCTTGTGCATACTTTTGTTA+AGG | - | chr7_4:52276790-52276809 | Msa1161920:intron | 30.0% |
| TACTTCCATGATTCATTAAG+TGG | - | chr7_4:52276881-52276900 | Msa1161920:intron | 30.0% | |
| TTATAGCTTGATTGTATTCC+AGG | - | chr7_4:52276945-52276964 | Msa1161920:intron | 30.0% | |
| TTGATTGTATTCCAGGTAAA+AGG | - | chr7_4:52276952-52276971 | Msa1161920:intron | 30.0% | |
| !! | GACAACCATATTTGATTTTG+AGG | - | chr7_4:52277264-52277283 | Msa1161920:intron | 30.0% |
| ATTCTAACCTTGTCTCTATT+AGG | + | chr7_4:52277295-52277314 | None:intergenic | 30.0% | |
| ! | TTTTCTATGATGTTACCTTC+TGG | - | chr7_4:52277592-52277611 | Msa1161920:intron | 30.0% |
| GCCAATATAAGGTTTAATTC+TGG | - | chr7_4:52277827-52277846 | Msa1161920:intron | 30.0% | |
| !!! | GTAGGAATGTTTTTTACTAG+TGG | - | chr7_4:52278074-52278093 | Msa1161920:intron | 30.0% |
| ! | TGGATTTTGCAGTTTATATG+GGG | + | chr7_4:52278108-52278127 | None:intergenic | 30.0% |
| ATCTCATTGTTCATCTATGA+AGG | - | chr7_4:52278172-52278191 | Msa1161920:intron | 30.0% | |
| TCTCATTGTTCATCTATGAA+GGG | - | chr7_4:52278173-52278192 | Msa1161920:intron | 30.0% | |
| !! | AACCAGTTTTTGTTTGACAT+AGG | - | chr7_4:52278276-52278295 | Msa1161920:intron | 30.0% |
| ATCCTATGTCAAACAAAAAC+TGG | + | chr7_4:52278281-52278300 | None:intergenic | 30.0% | |
| ! | TTATTTTCCACTCTCTCTAT+GGG | - | chr7_4:52278413-52278432 | Msa1161920:intron | 30.0% |
| ! | TTTTAAACAAAAGAGGCGAA+GGG | + | chr7_4:52278682-52278701 | None:intergenic | 30.0% |
| ! | ATTTTAAACAAAAGAGGCGA+AGG | + | chr7_4:52278683-52278702 | None:intergenic | 30.0% |
| CTAGTTAATTGAGCGTTAAT+TGG | + | chr7_4:52278793-52278812 | None:intergenic | 30.0% | |
| ACAGTAAAGTTGTTGTCATT+AGG | - | chr7_4:52278898-52278917 | Msa1161920:intron | 30.0% | |
| AAATTAAAAAAAGGGAGGAC+CGG | + | chr7_4:52278990-52279009 | None:intergenic | 30.0% | |
| CATAACAACCTGATTACATT+TGG | - | chr7_4:52279114-52279133 | Msa1161920:intron | 30.0% | |
| ATCAACAACCAAATGTAATC+AGG | + | chr7_4:52279125-52279144 | None:intergenic | 30.0% | |
| TACTTATAGAGACATTTCTG+AGG | + | chr7_4:52279181-52279200 | None:intergenic | 30.0% | |
| !! | ATTGTACAAGCTCTAAAAAG+GGG | - | chr7_4:52279231-52279250 | Msa1161920:intron | 30.0% |
| ACATCTTCTTTACTAATCTC+TGG | + | chr7_4:52279443-52279462 | None:intergenic | 30.0% | |
| ATTGAAAGTAGGAAAGAATG+AGG | + | chr7_4:52279687-52279706 | None:intergenic | 30.0% | |
| AAGATTCTTGTGTATCAGTA+TGG | + | chr7_4:52279802-52279821 | None:intergenic | 30.0% | |
| ATACACAAGAATCTTGTGAA+AGG | - | chr7_4:52279807-52279826 | Msa1161920:CDS | 30.0% | |
| !! | ACAGGTTTTCCATTTAACTT+GGG | + | chr7_4:52279885-52279904 | None:intergenic | 30.0% |
| ACCCATGATTCTAAATTTCA+AGG | - | chr7_4:52279928-52279947 | Msa1161920:intron | 30.0% | |
| ! | CACCTTGAAATTTAGAATCA+TGG | + | chr7_4:52279933-52279952 | None:intergenic | 30.0% |
| ! | AATTTTGTGAAAGGGTTCTT+CGG | - | chr7_4:52279978-52279997 | Msa1161920:intron | 30.0% |
| CATTCAATACAACAAACCTA+TGG | + | chr7_4:52280004-52280023 | None:intergenic | 30.0% | |
| TTAACAACAAGAACACATTC+GGG | + | chr7_4:52280036-52280055 | None:intergenic | 30.0% | |
| AAAACATACAACCATACAAG+TGG | + | chr7_4:52280147-52280166 | None:intergenic | 30.0% | |
| CTTTCTTCGAAGATCAACAA+TGG | - | chr7_4:52274367-52274386 | Msa1161920:three_prime_UTR | 35.0% | |
| GTTATAGGCTTCAACGAAAT+TGG | + | chr7_4:52274651-52274670 | None:intergenic | 35.0% | |
| !!! | GGTTTTTTCGAAAGCGTTAT+AGG | + | chr7_4:52274666-52274685 | None:intergenic | 35.0% |
| ! | AATTTTCAGTGCGTTTGTTC+AGG | - | chr7_4:52274773-52274792 | Msa1161920:CDS | 35.0% |
| AATTAGGGTTCTTGCTGAAA+AGG | - | chr7_4:52274854-52274873 | Msa1161920:CDS | 35.0% | |
| CGAAACATACAATACACGTT+TGG | + | chr7_4:52274960-52274979 | None:intergenic | 35.0% | |
| ! | AATTTAAACCCCTCTAGAAG+TGG | + | chr7_4:52274985-52275004 | None:intergenic | 35.0% |
| !! | CTTTGCTTTTGTCTCTAGAA+TGG | - | chr7_4:52275025-52275044 | Msa1161920:CDS | 35.0% |
| ! | AATGGATTCTACTTGAAGCT+AGG | - | chr7_4:52275043-52275062 | Msa1161920:CDS | 35.0% |
| GAGTTGAATGTAAACTGAAC+TGG | - | chr7_4:52275304-52275323 | Msa1161920:intron | 35.0% | |
| TTGAATGTAAACTGAACTGG+AGG | - | chr7_4:52275307-52275326 | Msa1161920:intron | 35.0% | |
| CAAATTTGCCTCTTCAAAAG+TGG | - | chr7_4:52275359-52275378 | Msa1161920:intron | 35.0% | |
| TGATACCAAACACTCACTTA+AGG | - | chr7_4:52275463-52275482 | Msa1161920:intron | 35.0% | |
| TTGAACCTTAAGTGAGTGTT+TGG | + | chr7_4:52275471-52275490 | None:intergenic | 35.0% | |
| !! | TAAGGTTCAACTCACTTTTG+CGG | - | chr7_4:52275481-52275500 | Msa1161920:intron | 35.0% |
| ! | AGCAGTCTAATTGATTCTAG+AGG | + | chr7_4:52275773-52275792 | None:intergenic | 35.0% |
| CTAAACGTGAAACCAATCAT+AGG | - | chr7_4:52275793-52275812 | Msa1161920:intron | 35.0% | |
| ! | AAGTAAGTTGAGCCTATGAT+TGG | + | chr7_4:52275808-52275827 | None:intergenic | 35.0% |
| GAGAGGAGTTTATAAAGAGA+AGG | - | chr7_4:52275923-52275942 | Msa1161920:intron | 35.0% | |
| AAATCTCCTGAGAAGTTGAA+AGG | - | chr7_4:52276179-52276198 | Msa1161920:intron | 35.0% | |
| GAAAATCTTTACATACCGCA+AGG | + | chr7_4:52276238-52276257 | None:intergenic | 35.0% | |
| ACAGTGGTACGAAACTAAAT+TGG | + | chr7_4:52276419-52276438 | None:intergenic | 35.0% | |
| !! | TACCACTGTTGATTGGTTTA+GGG | - | chr7_4:52276430-52276449 | Msa1161920:intron | 35.0% |
| CTTTGCAATGCTAAGCAATA+TGG | + | chr7_4:52276463-52276482 | None:intergenic | 35.0% | |
| !! | AACTACTTTTGCCATATCTC+AGG | + | chr7_4:52276614-52276633 | None:intergenic | 35.0% |
| ACTTTAACAACAAGCTCAAC+AGG | + | chr7_4:52276666-52276685 | None:intergenic | 35.0% | |
| CAAGTAGTACATGCATGAAT+AGG | + | chr7_4:52276739-52276758 | None:intergenic | 35.0% | |
| ATTCATGCATGTACTACTTG+TGG | - | chr7_4:52276739-52276758 | Msa1161920:intron | 35.0% | |
| CACAAAACAACACAAAGCTA+TGG | + | chr7_4:52276854-52276873 | None:intergenic | 35.0% | |
| CACATCCACTTAATGAATCA+TGG | + | chr7_4:52276889-52276908 | None:intergenic | 35.0% | |
| GTGTGAAATTTCACTTTCAG+AGG | - | chr7_4:52276906-52276925 | Msa1161920:intron | 35.0% | |
| ! | TCTCATTTGTTGACATATGC+TGG | - | chr7_4:52277089-52277108 | Msa1161920:intron | 35.0% |
| ! | ATCTGAACTTTTAGCATCTC+AGG | - | chr7_4:52277117-52277136 | Msa1161920:intron | 35.0% |
| ! | AGCTGCAAAACATTTGTTGA+TGG | + | chr7_4:52277196-52277215 | None:intergenic | 35.0% |
| ! | TCAACAAATGTTTTGCAGCT+TGG | - | chr7_4:52277196-52277215 | Msa1161920:intron | 35.0% |
| TTCTTATTATACTGCGGCAA+AGG | + | chr7_4:52277231-52277250 | None:intergenic | 35.0% | |
| GGAATTTCCTAATAGAGACA+AGG | - | chr7_4:52277285-52277304 | Msa1161920:intron | 35.0% | |
| GTCACTTACATGTACTATAC+TGG | - | chr7_4:52277413-52277432 | Msa1161920:CDS | 35.0% | |
| GTTTACATTTGTGACTTGAC+AGG | - | chr7_4:52277754-52277773 | Msa1161920:intron | 35.0% | |
| !! | TTATATTGGCTTCATGCTGT+TGG | + | chr7_4:52277817-52277836 | None:intergenic | 35.0% |
| AACAGCATGAAGCCAATATA+AGG | - | chr7_4:52277816-52277835 | Msa1161920:intron | 35.0% | |
| ! | CATGAAGTGAGCTTTCTTTT+AGG | - | chr7_4:52277876-52277895 | Msa1161920:intron | 35.0% |
| !! | CAAATGCACCTTTAATTTGC+AGG | + | chr7_4:52277916-52277935 | None:intergenic | 35.0% |
| ! | GCAAATTAAAGGTGCATTTG+TGG | - | chr7_4:52277916-52277935 | Msa1161920:intron | 35.0% |
| ! | ATTAAAGGTGCATTTGTGGA+TGG | - | chr7_4:52277920-52277939 | Msa1161920:intron | 35.0% |
| ! | TTAAAGGTGCATTTGTGGAT+GGG | - | chr7_4:52277921-52277940 | Msa1161920:intron | 35.0% |
| ! | ATTTGGTGGCTAAGCAAAAA+TGG | - | chr7_4:52278039-52278058 | Msa1161920:intron | 35.0% |
| ! | GGATTTTGCAGTTTATATGG+GGG | + | chr7_4:52278107-52278126 | None:intergenic | 35.0% |
| TTTACTAGGGTAGGAAGATT+TGG | + | chr7_4:52278128-52278147 | None:intergenic | 35.0% | |
| CAGAAGGACAGAGTTAAATA+TGG | + | chr7_4:52278243-52278262 | None:intergenic | 35.0% | |
| ATTCCAGTGAAGCTTTCAAT+AGG | - | chr7_4:52278317-52278336 | Msa1161920:intron | 35.0% | |
| ACAATCTACTTGAGGTATGT+TGG | - | chr7_4:52278372-52278391 | Msa1161920:intron | 35.0% | |
| CAATCTACTTGAGGTATGTT+GGG | - | chr7_4:52278373-52278392 | Msa1161920:intron | 35.0% | |
| !! | GTTATTTTCCACTCTCTCTA+TGG | - | chr7_4:52278412-52278431 | Msa1161920:intron | 35.0% |
| ! | TATTTTCCACTCTCTCTATG+GGG | - | chr7_4:52278414-52278433 | Msa1161920:intron | 35.0% |
| !!! | GTAAACCTTTTAGAGCTTGT+AGG | - | chr7_4:52278480-52278499 | Msa1161920:CDS | 35.0% |
| AAACTAAGTTACTGCTCAGA+CGG | + | chr7_4:52278525-52278544 | None:intergenic | 35.0% | |
| ! | TTTTCCAAGTGCCAATTTGT+AGG | - | chr7_4:52278625-52278644 | Msa1161920:intron | 35.0% |
| TGGACATTATCAGTAATGAG+AGG | + | chr7_4:52278756-52278775 | None:intergenic | 35.0% | |
| TGCTAAGTTTGGCTATTCAA+AGG | - | chr7_4:52279009-52279028 | Msa1161920:intron | 35.0% | |
| GCTAAGTTTGGCTATTCAAA+GGG | - | chr7_4:52279010-52279029 | Msa1161920:intron | 35.0% | |
| AAAAATCAAGCACTTGGAGT+TGG | - | chr7_4:52279041-52279060 | Msa1161920:intron | 35.0% | |
| ! | TTTTGTAGGTTCTTGAGATC+AGG | - | chr7_4:52279378-52279397 | Msa1161920:intron | 35.0% |
| TGTATATCTTGTCCTAGAGA+AGG | - | chr7_4:52279401-52279420 | Msa1161920:intron | 35.0% | |
| TAATACACATCGAAAAGGAG+GGG | + | chr7_4:52279489-52279508 | None:intergenic | 35.0% | |
| CTAATACACATCGAAAAGGA+GGG | + | chr7_4:52279490-52279509 | None:intergenic | 35.0% | |
| ACAGCTAATACACATCGAAA+AGG | + | chr7_4:52279494-52279513 | None:intergenic | 35.0% | |
| GAAATGGCTTGAAATTGACA+TGG | - | chr7_4:52279631-52279650 | Msa1161920:intron | 35.0% | |
| TTTGCAGGTAGAGTGTATAA+TGG | - | chr7_4:52279776-52279795 | Msa1161920:intron | 35.0% | |
| !! | TTCCATTTAACTTGGGGAAA+GGG | + | chr7_4:52279878-52279897 | None:intergenic | 35.0% |
| !! | TTTCCATTTAACTTGGGGAA+AGG | + | chr7_4:52279879-52279898 | None:intergenic | 35.0% |
| !!! | CAGGTTTTCCATTTAACTTG+GGG | + | chr7_4:52279884-52279903 | None:intergenic | 35.0% |
| ! | GACAGGTTTTCCATTTAACT+TGG | + | chr7_4:52279886-52279905 | None:intergenic | 35.0% |
| GGAAAACCTGTCAATTCATA+AGG | - | chr7_4:52279894-52279913 | Msa1161920:intron | 35.0% | |
| ! | TAGCAGGGTAATTTTGTGAA+AGG | - | chr7_4:52279969-52279988 | Msa1161920:intron | 35.0% |
| ! | AGCAGGGTAATTTTGTGAAA+GGG | - | chr7_4:52279970-52279989 | Msa1161920:intron | 35.0% |
| TAACAACAAGAACACATTCG+GGG | + | chr7_4:52280035-52280054 | None:intergenic | 35.0% | |
| ! | TGGTTTAGTTTCCACTTGTA+TGG | - | chr7_4:52280133-52280152 | Msa1161920:CDS | 35.0% |
| AACAATGGCGTATTTGAGCA+TGG | - | chr7_4:52274382-52274401 | Msa1161920:three_prime_UTR | 40.0% | |
| ACAATGGCGTATTTGAGCAT+GGG | - | chr7_4:52274383-52274402 | Msa1161920:three_prime_UTR | 40.0% | |
| !!! | GATGCCGTTTTGGTATGAAA+CGG | + | chr7_4:52274456-52274475 | None:intergenic | 40.0% |
| !! | ATTTGAGAGAGATGCCGTTT+TGG | + | chr7_4:52274466-52274485 | None:intergenic | 40.0% |
| TGTTGAAGTGATCGGAAAAG+AGG | + | chr7_4:52274617-52274636 | None:intergenic | 40.0% | |
| ! | AAAGGTATGTTGTGCCTGTT+TGG | - | chr7_4:52274872-52274891 | Msa1161920:CDS | 40.0% |
| ATGTTTCGTTCCACTTCTAG+AGG | - | chr7_4:52274972-52274991 | Msa1161920:intron | 40.0% | |
| TGTTTCGTTCCACTTCTAGA+GGG | - | chr7_4:52274973-52274992 | Msa1161920:intron | 40.0% | |
| !! | ACACACTATGTTTGGTTCTG+CGG | + | chr7_4:52275213-52275232 | None:intergenic | 40.0% |
| !! | GTTTGGTTCCACTTTTGAAG+AGG | + | chr7_4:52275370-52275389 | None:intergenic | 40.0% |
| ! | TAGTGTGCAACTCGATTTTG+CGG | - | chr7_4:52275397-52275416 | Msa1161920:CDS | 40.0% |
| CGTGTTACATAGTGCATGTT+TGG | - | chr7_4:52275524-52275543 | Msa1161920:intron | 40.0% | |
| GAATCCTATCTATCCGATGT+GGG | + | chr7_4:52275901-52275920 | None:intergenic | 40.0% | |
| AGAATCCTATCTATCCGATG+TGG | + | chr7_4:52275902-52275921 | None:intergenic | 40.0% | |
| GGATAGATAGGATTCTTGAG+AGG | - | chr7_4:52275906-52275925 | Msa1161920:intron | 40.0% | |
| CTAACTCATCCTTACAAGAC+AGG | + | chr7_4:52275967-52275986 | None:intergenic | 40.0% | |
| CTGTCTTGTAAGGATGAGTT+AGG | - | chr7_4:52275965-52275984 | Msa1161920:intron | 40.0% | |
| GGTGCTTGTAATGAATATCG+AGG | + | chr7_4:52275991-52276010 | None:intergenic | 40.0% | |
| !! | GTTTTAGGCTGACAGACAAT+TGG | - | chr7_4:52276145-52276164 | Msa1161920:intron | 40.0% |
| !!! | GAAAGTTTTTGGCATCCTTG+CGG | - | chr7_4:52276220-52276239 | Msa1161920:intron | 40.0% |
| AGTTTCGTACCACTGTTGAT+TGG | - | chr7_4:52276423-52276442 | Msa1161920:intron | 40.0% | |
| !! | GTACCACTGTTGATTGGTTT+AGG | - | chr7_4:52276429-52276448 | Msa1161920:intron | 40.0% |
| CATTAGAAACCAATGGCATC+AGG | + | chr7_4:52276494-52276513 | None:intergenic | 40.0% | |
| TTAACAACAAGCTCAACAGG+TGG | + | chr7_4:52276663-52276682 | None:intergenic | 40.0% | |
| !! | GCTTGTTGTTAAAGTTGAGC+TGG | - | chr7_4:52276671-52276690 | Msa1161920:intron | 40.0% |
| CGATAGGAAAGGAAAGCAAA+CGG | + | chr7_4:52277044-52277063 | None:intergenic | 40.0% | |
| CGTTTGCTTTCCTTTCCTAT+CGG | - | chr7_4:52277042-52277061 | Msa1161920:intron | 40.0% | |
| GTTTGCTTTCCTTTCCTATC+GGG | - | chr7_4:52277043-52277062 | Msa1161920:intron | 40.0% | |
| TTTGCTTTCCTTTCCTATCG+GGG | - | chr7_4:52277044-52277063 | Msa1161920:intron | 40.0% | |
| TCAGAACTCAGAACACAATC+AGG | + | chr7_4:52277509-52277528 | None:intergenic | 40.0% | |
| ! | TAAAGGTGCATTTGTGGATG+GGG | - | chr7_4:52277922-52277941 | Msa1161920:intron | 40.0% |
| TTTGCAGTTTATATGGGGGT+TGG | + | chr7_4:52278103-52278122 | None:intergenic | 40.0% | |
| ATCTTCCTACCCTAGTAAAG+AGG | - | chr7_4:52278129-52278148 | Msa1161920:intron | 40.0% | |
| GTTACAGATCGTCATACAGA+AGG | + | chr7_4:52278259-52278278 | None:intergenic | 40.0% | |
| ATGCCTATTGAAAGCTTCAC+TGG | + | chr7_4:52278323-52278342 | None:intergenic | 40.0% | |
| ! | GGAGAAGTACAATCTACTTG+AGG | - | chr7_4:52278364-52278383 | Msa1161920:intron | 40.0% |
| ! | ATTTTCCACTCTCTCTATGG+GGG | - | chr7_4:52278415-52278434 | Msa1161920:intron | 40.0% |
| AGACGGAAACATAACTGAGT+TGG | + | chr7_4:52278508-52278527 | None:intergenic | 40.0% | |
| ! | TTTTCCCACAAGTGTCTGAT+GGG | - | chr7_4:52278651-52278670 | Msa1161920:intron | 40.0% |
| ! | CCAAGGCACCACAATAAAAA+AGG | + | chr7_4:52278874-52278893 | None:intergenic | 40.0% |
| !!! | CCTTTTTTATTGTGGTGCCT+TGG | - | chr7_4:52278871-52278890 | Msa1161920:intron | 40.0% |
| CGTACAATACACCAAATGGT+TGG | - | chr7_4:52278924-52278943 | Msa1161920:intron | 40.0% | |
| TTTACCAGTCCTCGTGATAT+TGG | + | chr7_4:52279284-52279303 | None:intergenic | 40.0% | |
| !!! | ATGCTCTCTAGAGCAACTTT+TGG | + | chr7_4:52279343-52279362 | None:intergenic | 40.0% |
| CTTGAAGTTCTACCTTCTCT+AGG | + | chr7_4:52279416-52279435 | None:intergenic | 40.0% | |
| AATACACATCGAAAAGGAGG+GGG | + | chr7_4:52279488-52279507 | None:intergenic | 40.0% | |
| GCTAATACACATCGAAAAGG+AGG | + | chr7_4:52279491-52279510 | None:intergenic | 40.0% | |
| GCTTGAAATTGACATGGATG+TGG | - | chr7_4:52279637-52279656 | Msa1161920:intron | 40.0% | |
| AATTGACATGGATGTGGATG+AGG | - | chr7_4:52279643-52279662 | Msa1161920:intron | 40.0% | |
| GAAAGTAGGAAAGAATGAGG+AGG | + | chr7_4:52279684-52279703 | None:intergenic | 40.0% | |
| !! | TACAGCCACTTTGCTTTTGT+GGG | + | chr7_4:52279841-52279860 | None:intergenic | 40.0% |
| !! | ATACAGCCACTTTGCTTTTG+TGG | + | chr7_4:52279842-52279861 | None:intergenic | 40.0% |
| ACCTGTCAATTCATAAGGAC+TGG | - | chr7_4:52279899-52279918 | Msa1161920:intron | 40.0% | |
| TCCAGTCCTTATGAATTGAC+AGG | + | chr7_4:52279903-52279922 | None:intergenic | 40.0% | |
| AAAATTACCCTGCTATTGCC+AGG | + | chr7_4:52279964-52279983 | None:intergenic | 40.0% | |
| ! | TGTTTTATAAGGGCTACCAG+TGG | - | chr7_4:52280161-52280180 | Msa1161920:CDS | 40.0% |
| ACTACTGAGAACCTAACATG+TGG | - | chr7_4:52280255-52280274 | Msa1161920:CDS | 40.0% | |
| TCACTAGTGAACCACATGTT+AGG | + | chr7_4:52280269-52280288 | None:intergenic | 40.0% | |
| ! | GGAGAAACGGTTGAGGTATT+CGG | + | chr7_4:52274429-52274448 | None:intergenic | 45.0% |
| !! | GTTTTGGTATGAAACGGCGT+CGG | + | chr7_4:52274450-52274469 | None:intergenic | 45.0% |
| GACGCCGTTTCATACCAAAA+CGG | - | chr7_4:52274449-52274468 | Msa1161920:three_prime_UTR | 45.0% | |
| ! | GTTTCGTTCCACTTCTAGAG+GGG | - | chr7_4:52274974-52274993 | Msa1161920:intron | 45.0% |
| TAGTCCCACATCGGATAGAT+AGG | - | chr7_4:52275894-52275913 | Msa1161920:intron | 45.0% | |
| CTGTACAAGCCTGTCTTGTA+AGG | - | chr7_4:52275955-52275974 | Msa1161920:intron | 45.0% | |
| GACAGACAATTGGCTGCAAA+TGG | - | chr7_4:52276155-52276174 | Msa1161920:intron | 45.0% | |
| GACCCTAAACCAATCAACAG+TGG | + | chr7_4:52276435-52276454 | None:intergenic | 45.0% | |
| GTGAATAAGCCTGATGCCAT+TGG | - | chr7_4:52276482-52276501 | Msa1161920:intron | 45.0% | |
| ! | AGGGGTGCATTAGAAACCAA+TGG | + | chr7_4:52276501-52276520 | None:intergenic | 45.0% |
| TCCCAGATGAACCTGAGATA+TGG | - | chr7_4:52276600-52276619 | Msa1161920:intron | 45.0% | |
| GCCATATCTCAGGTTCATCT+GGG | + | chr7_4:52276604-52276623 | None:intergenic | 45.0% | |
| TGCCATATCTCAGGTTCATC+TGG | + | chr7_4:52276605-52276624 | None:intergenic | 45.0% | |
| !! | GTAAAAGGTGCTAAGCGTGT+TGG | - | chr7_4:52276967-52276986 | Msa1161920:intron | 45.0% |
| TTGCTTTCCTTTCCTATCGG+GGG | - | chr7_4:52277045-52277064 | Msa1161920:intron | 45.0% | |
| CTATAAACCCCCGATAGGAA+AGG | + | chr7_4:52277055-52277074 | None:intergenic | 45.0% | |
| ACTTTCTGTATGCTTCCTGC+TGG | - | chr7_4:52277530-52277549 | Msa1161920:intron | 45.0% | |
| TAGAAAACTACGAAGCCAGC+AGG | + | chr7_4:52277548-52277567 | None:intergenic | 45.0% | |
| GTTGCAATGCTTCAAGGCAT+AGG | + | chr7_4:52277795-52277814 | None:intergenic | 45.0% | |
| ! | CTGTTGGTTGCAATGCTTCA+AGG | + | chr7_4:52277801-52277820 | None:intergenic | 45.0% |
| CTACCCTAGTAAAGAGGAGT+GGG | - | chr7_4:52278135-52278154 | Msa1161920:intron | 45.0% | |
| GTTCCCACTCCTCTTTACTA+GGG | + | chr7_4:52278141-52278160 | None:intergenic | 45.0% | |
| TGTTCCCACTCCTCTTTACT+AGG | + | chr7_4:52278142-52278161 | None:intergenic | 45.0% | |
| TAGGCATATTGCCCAATCAC+AGG | - | chr7_4:52278336-52278355 | Msa1161920:intron | 45.0% | |
| TTCTCCAAGAGCCTGTGATT+GGG | + | chr7_4:52278350-52278369 | None:intergenic | 45.0% | |
| TGAGGTATGTTGGGTGCTTA+TGG | - | chr7_4:52278382-52278401 | Msa1161920:intron | 45.0% | |
| GTATGTTGGGTGCTTATGGA+TGG | - | chr7_4:52278386-52278405 | Msa1161920:intron | 45.0% | |
| ! | TTTTCCACTCTCTCTATGGG+GGG | - | chr7_4:52278416-52278435 | Msa1161920:intron | 45.0% |
| !! | TGGCACCTACAAGCTCTAAA+AGG | + | chr7_4:52278488-52278507 | None:intergenic | 45.0% |
| TCCAAGTGCCAATTTGTAGG+CGG | - | chr7_4:52278628-52278647 | Msa1161920:intron | 45.0% | |
| TGGGAAAACCGCCTACAAAT+TGG | + | chr7_4:52278639-52278658 | None:intergenic | 45.0% | |
| ! | GTTTTCCCACAAGTGTCTGA+TGG | - | chr7_4:52278650-52278669 | Msa1161920:intron | 45.0% |
| GTATCCCATCAGACACTTGT+GGG | + | chr7_4:52278658-52278677 | None:intergenic | 45.0% | |
| TGTATCCCATCAGACACTTG+TGG | + | chr7_4:52278659-52278678 | None:intergenic | 45.0% | |
| ACAACTTTACTGTTGCGCCA+AGG | + | chr7_4:52278891-52278910 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr7_4:52278920-52278939 | Msa1161920:intron | 45.0% | |
| AATCAAGCACTTGGAGTTGG+AGG | - | chr7_4:52279044-52279063 | Msa1161920:intron | 45.0% | |
| ATCAAGCACTTGGAGTTGGA+GGG | - | chr7_4:52279045-52279064 | Msa1161920:intron | 45.0% | |
| !! | AGACATTTCTGAGGCACACA+TGG | + | chr7_4:52279172-52279191 | None:intergenic | 45.0% |
| ATACACATCGAAAAGGAGGG+GGG | + | chr7_4:52279487-52279506 | None:intergenic | 45.0% | |
| CAATAACCTCCAACTTCACC+TGG | + | chr7_4:52279601-52279620 | None:intergenic | 45.0% | |
| CTTTGCCCACAAAAGCAAAG+TGG | - | chr7_4:52279833-52279852 | Msa1161920:CDS | 45.0% | |
| GACCCTTTCCCCAAGTTAAA+TGG | - | chr7_4:52279873-52279892 | Msa1161920:CDS | 45.0% | |
| TTTCAAGGTGCAAGAAAGCC+TGG | - | chr7_4:52279943-52279962 | Msa1161920:intron | 45.0% | |
| AAGAAAGCCTGGCAATAGCA+GGG | - | chr7_4:52279954-52279973 | Msa1161920:intron | 45.0% | |
| TCAGTGATTTCCACTTCCAC+TGG | + | chr7_4:52280180-52280199 | None:intergenic | 45.0% | |
| !! | AAATAAATGTATAAATAAAA+AGG | - | chr7_4:52278593-52278612 | Msa1161920:intron | 5.0% |
| !! | AATAAATGTATAAATAAAAA+GGG | - | chr7_4:52278594-52278613 | Msa1161920:intron | 5.0% |
| ! | ATGAAACGGCGTCGGAGAAA+CGG | + | chr7_4:52274442-52274461 | None:intergenic | 50.0% |
| AGAGAGAAGGAAGTGGGAGT+TGG | + | chr7_4:52274507-52274526 | None:intergenic | 50.0% | |
| GTCGATTGAAGTCGTTGACG+AGG | + | chr7_4:52274547-52274566 | None:intergenic | 50.0% | |
| TTCGTAATTGGGAATCCGCG+TGG | - | chr7_4:52274799-52274818 | Msa1161920:CDS | 50.0% | |
| TCGTAATTGGGAATCCGCGT+GGG | - | chr7_4:52274800-52274819 | Msa1161920:CDS | 50.0% | |
| CAAGACAGGCTTGTACAGTG+AGG | + | chr7_4:52275953-52275972 | None:intergenic | 50.0% | |
| CCAGCACCTTTCAACTTCTC+AGG | + | chr7_4:52276188-52276207 | None:intergenic | 50.0% | |
| ! | CCTGAGAAGTTGAAAGGTGC+TGG | - | chr7_4:52276185-52276204 | Msa1161920:intron | 50.0% |
| TCCTTCGAGCGAAACCACTT+GGG | + | chr7_4:52276283-52276302 | None:intergenic | 50.0% | |
| TCGCTCGAAGGAGTTTGAGA+AGG | - | chr7_4:52276291-52276310 | Msa1161920:CDS | 50.0% | |
| ACGCACAGAGTCACATAGCA+CGG | - | chr7_4:52276533-52276552 | Msa1161920:intron | 50.0% | |
| ! | CACGCTTAGCACCTTTTACC+TGG | + | chr7_4:52276966-52276985 | None:intergenic | 50.0% |
| GAGTGCTATAAACCCCCGAT+AGG | + | chr7_4:52277060-52277079 | None:intergenic | 50.0% | |
| CCACTCCTCTTTACTAGGGT+AGG | + | chr7_4:52278137-52278156 | None:intergenic | 50.0% | |
| CCTACCCTAGTAAAGAGGAG+TGG | - | chr7_4:52278134-52278153 | Msa1161920:intron | 50.0% | |
| ATTGCCCAATCACAGGCTCT+TGG | - | chr7_4:52278343-52278362 | Msa1161920:intron | 50.0% | |
| CTTCTCCAAGAGCCTGTGAT+TGG | + | chr7_4:52278351-52278370 | None:intergenic | 50.0% | |
| TTTCCACTCTCTCTATGGGG+GGG | - | chr7_4:52278417-52278436 | Msa1161920:intron | 50.0% | |
| ACCGCCTACAAATTGGCACT+TGG | + | chr7_4:52278632-52278651 | None:intergenic | 50.0% | |
| CATACACAGGGTTCGGGAAT+GGG | + | chr7_4:52278951-52278970 | None:intergenic | 50.0% | |
| ATTCCCGAACCCTGTGTATG+CGG | - | chr7_4:52278951-52278970 | Msa1161920:intron | 50.0% | |
| CAAAAGCTCCCGCATACACA+GGG | + | chr7_4:52278963-52278982 | None:intergenic | 50.0% | |
| ACAAAAGCTCCCGCATACAC+AGG | + | chr7_4:52278964-52278983 | None:intergenic | 50.0% | |
| AGTGCAGACCGAAGAAGTTG+AGG | + | chr7_4:52279261-52279280 | None:intergenic | 50.0% | |
| GTCTGCACTCCAATATCACG+AGG | - | chr7_4:52279272-52279291 | Msa1161920:intron | 50.0% | |
| CACTCCAATATCACGAGGAC+TGG | - | chr7_4:52279277-52279296 | Msa1161920:intron | 50.0% | |
| TACACATCGAAAAGGAGGGG+GGG | + | chr7_4:52279486-52279505 | None:intergenic | 50.0% | |
| CAAGAAAGCCTGGCAATAGC+AGG | - | chr7_4:52279953-52279972 | Msa1161920:intron | 50.0% | |
| TGAAAGGGTTCTTCGGCCAT+AGG | - | chr7_4:52279985-52280004 | Msa1161920:CDS | 50.0% | |
| ATAAGGGCTACCAGTGGAAG+TGG | - | chr7_4:52280167-52280186 | Msa1161920:CDS | 50.0% | |
| GGCGAGAGAGAGAAGGAAGT+GGG | + | chr7_4:52274513-52274532 | None:intergenic | 55.0% | |
| ! | GTTGACGAGGATGAGAGCGT+CGG | + | chr7_4:52274534-52274553 | None:intergenic | 55.0% |
| TACAGCTTCAAGAGCCCACG+CGG | + | chr7_4:52274817-52274836 | None:intergenic | 55.0% | |
| CACTGTTAGCGGCCAACACT+CGG | - | chr7_4:52275864-52275883 | Msa1161920:intron | 55.0% | |
| ACTGTTAGCGGCCAACACTC+GGG | - | chr7_4:52275865-52275884 | Msa1161920:intron | 55.0% | |
| GACTAATCCCACCCGAGTGT+TGG | + | chr7_4:52275879-52275898 | None:intergenic | 55.0% | |
| !! | GGGTGGGATTAGTCCCACAT+CGG | - | chr7_4:52275885-52275904 | Msa1161920:intron | 55.0% |
| ACCCAAGTGGTTTCGCTCGA+AGG | - | chr7_4:52276279-52276298 | Msa1161920:intron | 55.0% | |
| CTCCTTCGAGCGAAACCACT+TGG | + | chr7_4:52276284-52276303 | None:intergenic | 55.0% | |
| TGACTCTGTGCGTGTCTGTG+GGG | + | chr7_4:52276526-52276545 | None:intergenic | 55.0% | |
| GTGACTCTGTGCGTGTCTGT+GGG | + | chr7_4:52276527-52276546 | None:intergenic | 55.0% | |
| TGTGACTCTGTGCGTGTCTG+TGG | + | chr7_4:52276528-52276547 | None:intergenic | 55.0% | |
| CGGGAATGGGTCCAACCATT+TGG | + | chr7_4:52278938-52278957 | None:intergenic | 55.0% | |
| GCATACACAGGGTTCGGGAA+TGG | + | chr7_4:52278952-52278971 | None:intergenic | 55.0% | |
| TTCCCGAACCCTGTGTATGC+GGG | - | chr7_4:52278952-52278971 | Msa1161920:intron | 55.0% | |
| ! | ATGCGGGAGCTTTTGTGCAC+CGG | - | chr7_4:52278968-52278987 | Msa1161920:intron | 55.0% |
| GGGGCGATCCTCAACTTCTT+CGG | - | chr7_4:52279250-52279269 | Msa1161920:intron | 55.0% | |
| TCACCTGGTGAGCTCTGCTT+GGG | + | chr7_4:52279586-52279605 | None:intergenic | 55.0% | |
| TTCACCTGGTGAGCTCTGCT+TGG | + | chr7_4:52279587-52279606 | None:intergenic | 55.0% | |
| CAGAGCTCACCAGGTGAAGT+TGG | - | chr7_4:52279589-52279608 | Msa1161920:intron | 55.0% | |
| AGCTCACCAGGTGAAGTTGG+AGG | - | chr7_4:52279592-52279611 | Msa1161920:intron | 55.0% | |
| CGGCGAGAGAGAGAAGGAAG+TGG | + | chr7_4:52274514-52274533 | None:intergenic | 60.0% | |
| TTAGCGGCCAACACTCGGGT+GGG | - | chr7_4:52275869-52275888 | Msa1161920:intron | 60.0% | |
| ACTCTGTGCGTGTCTGTGGG+GGG | + | chr7_4:52276524-52276543 | None:intergenic | 60.0% | |
| GACTCTGTGCGTGTCTGTGG+GGG | + | chr7_4:52276525-52276544 | None:intergenic | 60.0% | |
| GTACCCCCCCATAGAGAGAG+TGG | + | chr7_4:52278423-52278442 | None:intergenic | 60.0% | |
| CTCCCGCATACACAGGGTTC+GGG | + | chr7_4:52278957-52278976 | None:intergenic | 60.0% | |
| GCTCCCGCATACACAGGGTT+CGG | + | chr7_4:52278958-52278977 | None:intergenic | 60.0% | |
| ATCGAAAAGGAGGGGGGGCA+AGG | + | chr7_4:52279481-52279500 | None:intergenic | 60.0% | |
| AGACCCAAGCAGAGCTCACC+AGG | - | chr7_4:52279580-52279599 | Msa1161920:intron | 60.0% | |
| ! | CGGCGTCGGAGAAACGGTTG+AGG | + | chr7_4:52274436-52274455 | None:intergenic | 65.0% |
| !! | GAGCGTCGGCGAGAGAGAGA+AGG | + | chr7_4:52274520-52274539 | None:intergenic | 65.0% |
| GTTAGCGGCCAACACTCGGG+TGG | - | chr7_4:52275868-52275887 | Msa1161920:intron | 65.0% | |
| TGTGCGTGTCTGTGGGGGGA+GGG | + | chr7_4:52276520-52276539 | None:intergenic | 65.0% | |
| GTGCGTGTCTGTGGGGGGAG+GGG | + | chr7_4:52276519-52276538 | None:intergenic | 70.0% | |
| CTGTGCGTGTCTGTGGGGGG+AGG | + | chr7_4:52276521-52276540 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 52274312 | 52280363 | 52274312 | ID=Msa1161920;Name=Msa1161920 |
| chr7_4 | mRNA | 52274312 | 52280363 | 52274312 | ID=Msa1161920-mRNA-1;Parent=Msa1161920;Name=Msa1161920-mRNA-1;_AED=0.06;_eAED=0.06;_QI=51|1|1|1|0.91|0.84|13|449|414 |
| chr7_4 | exon | 52274312 | 52274892 | 52274312 | ID=Msa1161920-mRNA-1:exon:14976;Parent=Msa1161920-mRNA-1 |
| chr7_4 | exon | 52275011 | 52275116 | 52275011 | ID=Msa1161920-mRNA-1:exon:14975;Parent=Msa1161920-mRNA-1 |
| chr7_4 | exon | 52275215 | 52275289 | 52275215 | ID=Msa1161920-mRNA-1:exon:14974;Parent=Msa1161920-mRNA-1 |
| chr7_4 | exon | 52275377 | 52275453 | 52275377 | ID=Msa1161920-mRNA-1:exon:14973;Parent=Msa1161920-mRNA-1 |
| chr7_4 | exon | 52276290 | 52276377 | 52276290 | ID=Msa1161920-mRNA-1:exon:14972;Parent=Msa1161920-mRNA-1 |
| chr7_4 | exon | 52276838 | 52276899 | 52276838 | ID=Msa1161920-mRNA-1:exon:14971;Parent=Msa1161920-mRNA-1 |
| chr7_4 | exon | 52277206 | 52277262 | 52277206 | ID=Msa1161920-mRNA-1:exon:14970;Parent=Msa1161920-mRNA-1 |
| chr7_4 | exon | 52277369 | 52277461 | 52277369 | ID=Msa1161920-mRNA-1:exon:14969;Parent=Msa1161920-mRNA-1 |
| chr7_4 | exon | 52277643 | 52277708 | 52277643 | ID=Msa1161920-mRNA-1:exon:14968;Parent=Msa1161920-mRNA-1 |
| chr7_4 | exon | 52278434 | 52278523 | 52278434 | ID=Msa1161920-mRNA-1:exon:14967;Parent=Msa1161920-mRNA-1 |
| chr7_4 | exon | 52279800 | 52279893 | 52279800 | ID=Msa1161920-mRNA-1:exon:14966;Parent=Msa1161920-mRNA-1 |
| chr7_4 | exon | 52279985 | 52280296 | 52279985 | ID=Msa1161920-mRNA-1:exon:14965;Parent=Msa1161920-mRNA-1 |
| chr7_4 | exon | 52280320 | 52280363 | 52280320 | ID=Msa1161920-mRNA-1:exon:14964;Parent=Msa1161920-mRNA-1 |
| chr7_4 | five_prime_UTR | 52280320 | 52280363 | 52280320 | ID=Msa1161920-mRNA-1:five_prime_utr;Parent=Msa1161920-mRNA-1 |
| chr7_4 | five_prime_UTR | 52280290 | 52280296 | 52280290 | ID=Msa1161920-mRNA-1:five_prime_utr;Parent=Msa1161920-mRNA-1 |
| chr7_4 | CDS | 52279985 | 52280289 | 52279985 | ID=Msa1161920-mRNA-1:cds;Parent=Msa1161920-mRNA-1 |
| chr7_4 | CDS | 52279800 | 52279893 | 52279800 | ID=Msa1161920-mRNA-1:cds;Parent=Msa1161920-mRNA-1 |
| chr7_4 | CDS | 52278434 | 52278523 | 52278434 | ID=Msa1161920-mRNA-1:cds;Parent=Msa1161920-mRNA-1 |
| chr7_4 | CDS | 52277643 | 52277708 | 52277643 | ID=Msa1161920-mRNA-1:cds;Parent=Msa1161920-mRNA-1 |
| chr7_4 | CDS | 52277369 | 52277461 | 52277369 | ID=Msa1161920-mRNA-1:cds;Parent=Msa1161920-mRNA-1 |
| chr7_4 | CDS | 52277206 | 52277262 | 52277206 | ID=Msa1161920-mRNA-1:cds;Parent=Msa1161920-mRNA-1 |
| chr7_4 | CDS | 52276838 | 52276899 | 52276838 | ID=Msa1161920-mRNA-1:cds;Parent=Msa1161920-mRNA-1 |
| chr7_4 | CDS | 52276290 | 52276377 | 52276290 | ID=Msa1161920-mRNA-1:cds;Parent=Msa1161920-mRNA-1 |
| chr7_4 | CDS | 52275377 | 52275453 | 52275377 | ID=Msa1161920-mRNA-1:cds;Parent=Msa1161920-mRNA-1 |
| chr7_4 | CDS | 52275215 | 52275289 | 52275215 | ID=Msa1161920-mRNA-1:cds;Parent=Msa1161920-mRNA-1 |
| chr7_4 | CDS | 52275011 | 52275116 | 52275011 | ID=Msa1161920-mRNA-1:cds;Parent=Msa1161920-mRNA-1 |
| chr7_4 | CDS | 52274761 | 52274892 | 52274761 | ID=Msa1161920-mRNA-1:cds;Parent=Msa1161920-mRNA-1 |
| chr7_4 | three_prime_UTR | 52274312 | 52274760 | 52274312 | ID=Msa1161920-mRNA-1:three_prime_utr;Parent=Msa1161920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
