Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115960 | XP_024625917.1 | 88.076 | 369 | 25 | 5 | 1 | 359 | 1 | 360 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115960 | sp|Q10LZ1|PHR1_ORYSJ | 48.551 | 138 | 64 | 5 | 203 | 339 | 208 | 339 | 1.43e-25 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115960 | G7KVB9 | 87.805 | 369 | 25 | 6 | 1 | 359 | 1 | 359 | 0.0 | 646 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1115960 | TF | GARP-G2-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1115960 | Msa1162510 | 0.800157 | 1.644076e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115960 | MtrunA17_Chr7g0258531 | 87.805 | 369 | 25 | 6 | 1 | 359 | 1 | 359 | 0.0 | 646 |
| Msa1115960 | MtrunA17_Chr1g0175071 | 40.663 | 332 | 163 | 10 | 35 | 357 | 9 | 315 | 1.94e-57 | 189 |
| Msa1115960 | MtrunA17_Chr1g0175091 | 44.898 | 147 | 77 | 3 | 201 | 345 | 245 | 389 | 2.23e-28 | 114 |
| Msa1115960 | MtrunA17_Chr7g0258551 | 44.361 | 133 | 71 | 2 | 214 | 344 | 212 | 343 | 1.52e-25 | 106 |
| Msa1115960 | MtrunA17_Chr1g0190301 | 43.478 | 138 | 75 | 3 | 203 | 339 | 165 | 300 | 4.36e-24 | 102 |
| Msa1115960 | MtrunA17_Chr7g0261911 | 39.130 | 161 | 93 | 4 | 182 | 339 | 229 | 387 | 8.50e-24 | 102 |
| Msa1115960 | MtrunA17_Chr7g0274471 | 44.094 | 127 | 69 | 2 | 214 | 339 | 218 | 343 | 1.34e-22 | 98.2 |
| Msa1115960 | MtrunA17_Chr2g0291021 | 42.647 | 136 | 68 | 4 | 214 | 343 | 49 | 180 | 1.92e-21 | 93.6 |
| Msa1115960 | MtrunA17_Chr7g0254981 | 36.601 | 153 | 80 | 4 | 203 | 343 | 35 | 182 | 6.77e-21 | 91.3 |
| Msa1115960 | MtrunA17_Chr5g0409731 | 35.099 | 151 | 71 | 3 | 214 | 344 | 25 | 168 | 2.06e-17 | 81.6 |
| Msa1115960 | MtrunA17_Chr8g0356501 | 37.500 | 128 | 75 | 3 | 214 | 337 | 37 | 163 | 2.97e-16 | 79.0 |
| Msa1115960 | MtrunA17_Chr2g0310011 | 36.719 | 128 | 76 | 3 | 214 | 337 | 35 | 161 | 1.08e-15 | 77.4 |
| Msa1115960 | MtrunA17_Chr7g0242521 | 36.719 | 128 | 77 | 2 | 212 | 336 | 11 | 137 | 3.02e-15 | 74.3 |
| Msa1115960 | MtrunA17_Chr2g0321461 | 34.014 | 147 | 73 | 4 | 213 | 337 | 44 | 188 | 4.79e-15 | 75.9 |
| Msa1115960 | MtrunA17_Chr6g0461641 | 33.103 | 145 | 73 | 4 | 213 | 337 | 41 | 181 | 1.05e-14 | 74.7 |
| Msa1115960 | MtrunA17_Chr1g0197171 | 36.220 | 127 | 79 | 2 | 214 | 340 | 44 | 168 | 3.54e-14 | 72.4 |
| Msa1115960 | MtrunA17_Chr2g0290991 | 32.215 | 149 | 87 | 3 | 214 | 356 | 39 | 179 | 2.22e-13 | 70.1 |
| Msa1115960 | MtrunA17_Chr4g0042451 | 31.111 | 135 | 82 | 1 | 214 | 337 | 17 | 151 | 3.96e-13 | 69.7 |
| Msa1115960 | MtrunA17_Chr8g0379121 | 60.377 | 53 | 21 | 0 | 216 | 268 | 113 | 165 | 9.53e-13 | 68.9 |
| Msa1115960 | MtrunA17_Chr1g0175081 | 46.479 | 71 | 37 | 1 | 198 | 267 | 5 | 75 | 3.25e-12 | 62.4 |
| Msa1115960 | MtrunA17_Chr3g0095611 | 53.704 | 54 | 25 | 0 | 216 | 269 | 21 | 74 | 1.60e-11 | 63.2 |
| Msa1115960 | MtrunA17_Chr2g0320231 | 56.604 | 53 | 23 | 0 | 216 | 268 | 99 | 151 | 2.61e-11 | 64.3 |
| Msa1115960 | MtrunA17_Chr5g0417521 | 29.412 | 136 | 84 | 1 | 214 | 337 | 15 | 150 | 3.17e-11 | 63.9 |
| Msa1115960 | MtrunA17_Chr1g0162931 | 43.750 | 80 | 33 | 2 | 216 | 283 | 20 | 99 | 3.66e-11 | 63.2 |
| Msa1115960 | MtrunA17_Chr2g0288601 | 55.102 | 49 | 22 | 0 | 216 | 264 | 73 | 121 | 4.60e-11 | 60.1 |
| Msa1115960 | MtrunA17_Chr7g0243081 | 56.604 | 53 | 23 | 0 | 216 | 268 | 73 | 125 | 4.93e-11 | 63.5 |
| Msa1115960 | MtrunA17_Chr1g0210911 | 39.000 | 100 | 49 | 2 | 216 | 304 | 24 | 122 | 6.63e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115960 | AT5G06800.1 | 40.714 | 140 | 82 | 1 | 214 | 353 | 192 | 330 | 5.98e-25 | 104 |
| Msa1115960 | AT2G01060.1 | 38.889 | 162 | 88 | 3 | 202 | 358 | 3 | 158 | 6.97e-25 | 102 |
| Msa1115960 | AT5G06800.2 | 41.892 | 148 | 74 | 4 | 214 | 353 | 192 | 335 | 3.02e-24 | 102 |
| Msa1115960 | AT3G13040.3 | 38.150 | 173 | 91 | 4 | 186 | 347 | 213 | 380 | 1.11e-22 | 99.0 |
| Msa1115960 | AT3G13040.1 | 38.150 | 173 | 91 | 4 | 186 | 347 | 213 | 380 | 1.11e-22 | 99.0 |
| Msa1115960 | AT3G13040.2 | 38.150 | 173 | 91 | 4 | 186 | 347 | 213 | 380 | 1.11e-22 | 99.0 |
| Msa1115960 | AT3G04450.1 | 38.961 | 154 | 83 | 4 | 205 | 349 | 229 | 380 | 1.23e-22 | 99.0 |
| Msa1115960 | AT3G04450.4 | 38.961 | 154 | 83 | 4 | 205 | 349 | 189 | 340 | 1.48e-22 | 98.2 |
| Msa1115960 | AT3G04450.2 | 38.961 | 154 | 83 | 4 | 205 | 349 | 189 | 340 | 1.48e-22 | 98.2 |
| Msa1115960 | AT5G29000.2 | 40.559 | 143 | 78 | 4 | 202 | 339 | 219 | 359 | 1.53e-22 | 98.2 |
| Msa1115960 | AT5G29000.1 | 40.559 | 143 | 78 | 4 | 202 | 339 | 176 | 316 | 1.75e-22 | 97.8 |
| Msa1115960 | AT5G29000.3 | 40.559 | 143 | 78 | 4 | 202 | 339 | 176 | 316 | 1.75e-22 | 97.8 |
| Msa1115960 | AT4G28610.1 | 41.216 | 148 | 81 | 4 | 194 | 339 | 208 | 351 | 4.79e-22 | 97.1 |
| Msa1115960 | AT1G79430.2 | 39.062 | 128 | 73 | 3 | 214 | 337 | 34 | 160 | 7.42e-18 | 84.3 |
| Msa1115960 | AT2G20400.1 | 35.811 | 148 | 85 | 2 | 214 | 356 | 231 | 373 | 8.34e-17 | 81.6 |
| Msa1115960 | AT4G13640.1 | 35.766 | 137 | 74 | 3 | 214 | 337 | 37 | 172 | 1.63e-16 | 79.3 |
| Msa1115960 | AT3G24120.1 | 35.294 | 136 | 76 | 2 | 214 | 337 | 41 | 176 | 3.13e-16 | 78.6 |
| Msa1115960 | AT2G20400.2 | 35.811 | 148 | 86 | 2 | 214 | 356 | 231 | 374 | 4.02e-16 | 79.3 |
| Msa1115960 | AT5G18240.1 | 35.461 | 141 | 74 | 3 | 213 | 337 | 44 | 183 | 7.86e-16 | 78.6 |
| Msa1115960 | AT5G18240.4 | 35.461 | 141 | 74 | 3 | 213 | 337 | 44 | 183 | 7.86e-16 | 78.6 |
| Msa1115960 | AT3G04030.3 | 34.266 | 143 | 73 | 3 | 213 | 337 | 44 | 183 | 1.30e-15 | 77.8 |
| Msa1115960 | AT1G69580.1 | 35.948 | 153 | 73 | 5 | 214 | 344 | 34 | 183 | 5.73e-15 | 75.5 |
| Msa1115960 | AT1G69580.2 | 35.294 | 153 | 75 | 4 | 214 | 344 | 34 | 184 | 5.88e-15 | 75.5 |
| Msa1115960 | AT4G13640.2 | 35.000 | 140 | 74 | 4 | 214 | 337 | 37 | 175 | 8.65e-15 | 74.3 |
| Msa1115960 | AT3G24120.2 | 34.532 | 139 | 76 | 3 | 214 | 337 | 41 | 179 | 1.85e-14 | 73.6 |
| Msa1115960 | AT5G06800.3 | 62.963 | 54 | 20 | 0 | 214 | 267 | 192 | 245 | 2.29e-14 | 73.2 |
| Msa1115960 | AT5G29000.4 | 48.529 | 68 | 35 | 0 | 202 | 269 | 219 | 286 | 4.94e-14 | 72.4 |
| Msa1115960 | AT5G18240.5 | 34.752 | 141 | 73 | 4 | 213 | 337 | 44 | 181 | 1.42e-13 | 71.6 |
| Msa1115960 | AT3G04450.3 | 47.692 | 65 | 34 | 0 | 205 | 269 | 229 | 293 | 1.57e-13 | 70.9 |
| Msa1115960 | AT2G42660.1 | 60.377 | 53 | 21 | 0 | 216 | 268 | 52 | 104 | 2.34e-13 | 69.7 |
| Msa1115960 | AT3G12730.1 | 33.108 | 148 | 90 | 3 | 214 | 352 | 23 | 170 | 3.29e-13 | 68.9 |
| Msa1115960 | AT3G04030.2 | 32.867 | 143 | 74 | 4 | 213 | 337 | 44 | 182 | 6.14e-13 | 69.7 |
| Msa1115960 | AT2G06020.1 | 31.387 | 137 | 80 | 3 | 139 | 267 | 9 | 139 | 2.29e-12 | 67.4 |
| Msa1115960 | AT4G04605.1 | 47.619 | 63 | 32 | 1 | 216 | 278 | 16 | 77 | 6.28e-12 | 65.1 |
| Msa1115960 | AT5G18240.2 | 31.724 | 145 | 77 | 4 | 213 | 336 | 44 | 187 | 9.03e-12 | 66.2 |
| Msa1115960 | AT5G18240.3 | 31.724 | 145 | 77 | 4 | 213 | 336 | 44 | 187 | 9.03e-12 | 66.2 |
| Msa1115960 | AT5G45580.2 | 33.099 | 142 | 75 | 3 | 214 | 336 | 23 | 163 | 1.05e-11 | 65.1 |
| Msa1115960 | AT5G45580.1 | 33.099 | 142 | 75 | 3 | 214 | 336 | 7 | 147 | 1.31e-11 | 64.7 |
| Msa1115960 | AT1G14600.1 | 45.455 | 77 | 38 | 1 | 197 | 269 | 2 | 78 | 1.55e-11 | 64.3 |
| Msa1115960 | AT2G40260.1 | 54.717 | 53 | 24 | 0 | 216 | 268 | 84 | 136 | 1.83e-11 | 65.5 |
| Msa1115960 | AT3G04030.1 | 32.540 | 126 | 64 | 3 | 213 | 320 | 44 | 166 | 1.85e-11 | 65.5 |
| Msa1115960 | AT4G04555.1 | 54.902 | 51 | 23 | 0 | 218 | 268 | 18 | 68 | 6.10e-11 | 59.3 |
| Msa1115960 | AT5G42630.2 | 40.506 | 79 | 45 | 1 | 193 | 269 | 82 | 160 | 6.60e-11 | 62.0 |
| Msa1115960 | AT2G38300.1 | 56.604 | 53 | 23 | 0 | 216 | 268 | 56 | 108 | 9.34e-11 | 62.8 |
Find 62 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAACAATTGACCTGTTATT+TGG | 0.089954 | 7_3:-63460427 | None:intergenic |
| AAGCAGACTCCTCAACTTTA+TGG | 0.179376 | 7_3:+63459394 | Msa1115960:CDS |
| CTTCTAACAACTCTGCTTCT+AGG | 0.281074 | 7_3:+63459428 | Msa1115960:CDS |
| AAGTATTTCGCAACAGTTAG+AGG | 0.311657 | 7_3:+63460162 | Msa1115960:CDS |
| AAACAATTGACCTGTTATTT+GGG | 0.315634 | 7_3:-63460426 | None:intergenic |
| CAAACATCTCATGATGGTTT+TGG | 0.318369 | 7_3:+63458194 | Msa1115960:CDS |
| ATTGGAGGGTCTGTTATCTT+TGG | 0.328987 | 7_3:-63458320 | None:intergenic |
| TCATGTTAAAAGCCATTTGC+AGG | 0.345777 | 7_3:+63459670 | Msa1115960:CDS |
| ACGCGTGCATAAAGCTTTGC+AGG | 0.361361 | 7_3:+63459817 | Msa1115960:CDS |
| GTGATTCCTCAATTTGCTTA+AGG | 0.361437 | 7_3:-63460114 | None:intergenic |
| TTCAAGGGGCTTCTCATCAA+TGG | 0.375794 | 7_3:-63458549 | None:intergenic |
| AACAACCTAGTTAAGGTTGT+TGG | 0.392826 | 7_3:+63458083 | Msa1115960:CDS |
| TTCTCTGAAAAGAAATTTCA+AGG | 0.402613 | 7_3:-63458565 | None:intergenic |
| TAGGTTGTTAATTCCTATGT+AGG | 0.408171 | 7_3:-63458069 | None:intergenic |
| AGGAATTAACAACCTAGTTA+AGG | 0.413307 | 7_3:+63458076 | Msa1115960:CDS |
| TGTAGTGACAATGTTGTTGC+AGG | 0.413465 | 7_3:-63458159 | None:intergenic |
| TGTGTTCTGATCCAACAATT+TGG | 0.429748 | 7_3:-63458112 | None:intergenic |
| ACAACCTAGTTAAGGTTGTT+GGG | 0.437913 | 7_3:+63458084 | Msa1115960:CDS |
| CAACATTGGTCAAAGATGTA+TGG | 0.453490 | 7_3:+63458032 | Msa1115960:CDS |
| GTTGGGTCAGACCAAATTGT+TGG | 0.464581 | 7_3:+63458101 | Msa1115960:CDS |
| CATACATCTTTGACCAATGT+TGG | 0.474221 | 7_3:-63458031 | None:intergenic |
| CAAAGATGTATGGAACTCAA+TGG | 0.475646 | 7_3:+63458042 | Msa1115960:CDS |
| GAGGATGAGATTGAAGTTCC+TGG | 0.496762 | 7_3:+63458278 | Msa1115960:CDS |
| AAAGATGTATGGAACTCAAT+GGG | 0.496984 | 7_3:+63458043 | Msa1115960:CDS |
| TCTGTTCTATGTCCTTCCTC+AGG | 0.498706 | 7_3:-63459936 | None:intergenic |
| ATGCTGAATTGTCAAGCCTA+TGG | 0.501729 | 7_3:+63458341 | Msa1115960:CDS |
| CTTTGACCAATGTTGGTACA+TGG | 0.506794 | 7_3:-63458024 | None:intergenic |
| TTGTTGCAGGGTGACTTGAT+TGG | 0.508916 | 7_3:-63458146 | None:intergenic |
| CAAGGTCAAACATCTCATGA+TGG | 0.511209 | 7_3:+63458188 | Msa1115960:CDS |
| GAACCAACCAAAGAAAATCA+TGG | 0.514020 | 7_3:+63460382 | Msa1115960:CDS |
| TGTAAAATTATCTCCTCCAT+AGG | 0.514916 | 7_3:-63458357 | None:intergenic |
| CTGACCCAACAACCTTAACT+AGG | 0.516049 | 7_3:-63458088 | None:intergenic |
| TAGCAGCCTTAAGCAAATTG+AGG | 0.522396 | 7_3:+63460108 | Msa1115960:intron |
| GCTTGACAATTCAGCATTGG+AGG | 0.527222 | 7_3:-63458335 | None:intergenic |
| CTCTGAAAAGAAATTTCAAG+GGG | 0.530710 | 7_3:-63458563 | None:intergenic |
| CATGTAAAAGAAGAGTAAGA+TGG | 0.531937 | 7_3:+63459461 | Msa1115960:CDS |
| AATCATGGACACAACGAGAA+AGG | 0.532795 | 7_3:+63460397 | Msa1115960:CDS |
| TCTCTGAAAAGAAATTTCAA+GGG | 0.533832 | 7_3:-63458564 | None:intergenic |
| AGAAGCAGAGTTGTTAGAAG+TGG | 0.539987 | 7_3:-63459425 | None:intergenic |
| TAGGCTTGACAATTCAGCAT+TGG | 0.547239 | 7_3:-63458338 | None:intergenic |
| AGATTCATCAACAGAGTACA+AGG | 0.551613 | 7_3:-63458399 | None:intergenic |
| AATTGCAGAGGCAAAGCCTA+AGG | 0.561046 | 7_3:+63459607 | Msa1115960:intron |
| ATGATAATCGTTGATCACCT+TGG | 0.567335 | 7_3:+63459508 | Msa1115960:CDS |
| ATCATATCTAGTATAGCCTT+AGG | 0.576046 | 7_3:-63459623 | None:intergenic |
| ACTCAATGGGAATCCTACAT+AGG | 0.576742 | 7_3:+63458056 | Msa1115960:CDS |
| CTTGACAATTCAGCATTGGA+GGG | 0.587253 | 7_3:-63458334 | None:intergenic |
| ATAATCGTTGATCACCTTGG+TGG | 0.592004 | 7_3:+63459511 | Msa1115960:CDS |
| AACCAACCATGTACCAACAT+TGG | 0.603963 | 7_3:+63458018 | None:intergenic |
| TTAAGCAAATTGAGGAATCA+CGG | 0.605256 | 7_3:+63460116 | Msa1115960:CDS |
| CGCGTGCATAAAGCTTTGCA+GGG | 0.611063 | 7_3:+63459818 | Msa1115960:CDS |
| CTGAATTGTCAAGCCTATGG+AGG | 0.616055 | 7_3:+63458344 | Msa1115960:CDS |
| AAGAAGAGTAAGATGGACAG+AGG | 0.623246 | 7_3:+63459468 | Msa1115960:CDS |
| ATCACGGCAGTTGCATCTAG+AGG | 0.629262 | 7_3:+63460132 | Msa1115960:CDS |
| GCACACATTCCATAAAGTTG+AGG | 0.636332 | 7_3:-63459403 | None:intergenic |
| CTTTCAGAAAGACCTGAGGA+AGG | 0.638784 | 7_3:+63459924 | Msa1115960:intron |
| ATGAGATTGAAGTTCCTGGT+TGG | 0.646002 | 7_3:+63458282 | Msa1115960:CDS |
| AGGTGAAGAATATTATGATG+AGG | 0.647413 | 7_3:+63458259 | Msa1115960:intron |
| GTAGTGACAATGTTGTTGCA+GGG | 0.658470 | 7_3:-63458158 | None:intergenic |
| CAAGGAGTTTGTGAACTGAG+AGG | 0.666646 | 7_3:-63458381 | None:intergenic |
| AACTGATCAAAACACCAACC+AGG | 0.670764 | 7_3:-63458296 | None:intergenic |
| TTATCTTTCAGAAAGACCTG+AGG | 0.675030 | 7_3:+63459920 | Msa1115960:intron |
| ACTTACTTTCAGGACCACCA+AGG | 0.705484 | 7_3:-63459525 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAAAAACAAATAAAA+AGG | - | chr7_3:63459315-63459334 | None:intergenic | 10.0% |
| !! | AAAAATAACAAATAAAAACA+AGG | - | chr7_3:63460282-63460301 | None:intergenic | 10.0% |
| !! | GAAAAAAAAAACAAATAAAA+AGG | - | chr7_3:63459315-63459334 | None:intergenic | 10.0% |
| !! | AAAAATAACAAATAAAAACA+AGG | - | chr7_3:63460282-63460301 | None:intergenic | 10.0% |
| !! | ATCTAATACTATAATTAAAC+AGG | - | chr7_3:63458757-63458776 | None:intergenic | 15.0% |
| !!! | TTCATGGATTTTTTTTTTAA+TGG | + | chr7_3:63458802-63458821 | Msa1115960:intron | 15.0% |
| !! | TGAATCTAATTATGAAATTT+AGG | + | chr7_3:63458939-63458958 | Msa1115960:intron | 15.0% |
| !! | GAATCTAATTATGAAATTTA+GGG | + | chr7_3:63458940-63458959 | Msa1115960:intron | 15.0% |
| !! | TCTAATAAAATTGATTAAAG+TGG | + | chr7_3:63459021-63459040 | Msa1115960:intron | 15.0% |
| !! | GAAAACTAAAAAAAAATCAA+TGG | + | chr7_3:63459076-63459095 | Msa1115960:intron | 15.0% |
| !! | TAACTAGTAATCTATTTATT+CGG | + | chr7_3:63459225-63459244 | Msa1115960:intron | 15.0% |
| !! | AAATTATTGAAATTGTTGAA+TGG | - | chr7_3:63459707-63459726 | None:intergenic | 15.0% |
| !! | ATCTAATACTATAATTAAAC+AGG | - | chr7_3:63458757-63458776 | None:intergenic | 15.0% |
| !!! | TTCATGGATTTTTTTTTTAA+TGG | + | chr7_3:63458802-63458821 | Msa1115960:intron | 15.0% |
| !! | TGAATCTAATTATGAAATTT+AGG | + | chr7_3:63458939-63458958 | Msa1115960:intron | 15.0% |
| !! | GAATCTAATTATGAAATTTA+GGG | + | chr7_3:63458940-63458959 | Msa1115960:intron | 15.0% |
| !! | TCTAATAAAATTGATTAAAG+TGG | + | chr7_3:63459021-63459040 | Msa1115960:intron | 15.0% |
| !! | GAAAACTAAAAAAAAATCAA+TGG | + | chr7_3:63459076-63459095 | Msa1115960:intron | 15.0% |
| !! | TAACTAGTAATCTATTTATT+CGG | + | chr7_3:63459225-63459244 | Msa1115960:intron | 15.0% |
| !! | AAATTATTGAAATTGTTGAA+TGG | - | chr7_3:63459707-63459726 | None:intergenic | 15.0% |
| !!! | ACTAACATTACTTTTGATTT+TGG | - | chr7_3:63458234-63458253 | None:intergenic | 20.0% |
| !!! | AAAAGTAATGTTAGTTTTCA+AGG | + | chr7_3:63458239-63458258 | Msa1115960:intron | 20.0% |
| !!! | AACAATTCATCATGTTTTTT+CGG | - | chr7_3:63458515-63458534 | None:intergenic | 20.0% |
| !! | AAAAACATGATGAATTGTTT+AGG | + | chr7_3:63458516-63458535 | Msa1115960:CDS | 20.0% |
| !! | CATTTCATATATAATTCAGA+TGG | - | chr7_3:63458646-63458665 | None:intergenic | 20.0% |
| !!! | AAGAATACTGTAACTTTTTT+TGG | - | chr7_3:63458721-63458740 | None:intergenic | 20.0% |
| !! | AAATCCATGAAATACTTAAA+AGG | - | chr7_3:63458793-63458812 | None:intergenic | 20.0% |
| !! | AATTAGATTCATTGCATATA+TGG | - | chr7_3:63458930-63458949 | None:intergenic | 20.0% |
| !!! | TCACATAAACATTCTTTTAA+CGG | + | chr7_3:63459044-63459063 | Msa1115960:intron | 20.0% |
| !!! | TAGTTGGGAATTTTTTTTAA+AGG | + | chr7_3:63459119-63459138 | Msa1115960:intron | 20.0% |
| !! | AACTAGTAATCTATTTATTC+GGG | + | chr7_3:63459226-63459245 | Msa1115960:intron | 20.0% |
| !! | TTAGTTAATTACTTACTTTC+AGG | - | chr7_3:63459538-63459557 | None:intergenic | 20.0% |
| !! | AATATACAATTATGCTTTGA+TGG | + | chr7_3:63460186-63460205 | Msa1115960:intron | 20.0% |
| !!! | ACTAACATTACTTTTGATTT+TGG | - | chr7_3:63458234-63458253 | None:intergenic | 20.0% |
| !!! | AAAAGTAATGTTAGTTTTCA+AGG | + | chr7_3:63458239-63458258 | Msa1115960:intron | 20.0% |
| !!! | AACAATTCATCATGTTTTTT+CGG | - | chr7_3:63458515-63458534 | None:intergenic | 20.0% |
| !! | AAAAACATGATGAATTGTTT+AGG | + | chr7_3:63458516-63458535 | Msa1115960:CDS | 20.0% |
| !! | CATTTCATATATAATTCAGA+TGG | - | chr7_3:63458646-63458665 | None:intergenic | 20.0% |
| !!! | AAGAATACTGTAACTTTTTT+TGG | - | chr7_3:63458721-63458740 | None:intergenic | 20.0% |
| !! | AAATCCATGAAATACTTAAA+AGG | - | chr7_3:63458793-63458812 | None:intergenic | 20.0% |
| !! | AATTAGATTCATTGCATATA+TGG | - | chr7_3:63458930-63458949 | None:intergenic | 20.0% |
| !!! | TCACATAAACATTCTTTTAA+CGG | + | chr7_3:63459044-63459063 | Msa1115960:intron | 20.0% |
| !!! | TAGTTGGGAATTTTTTTTAA+AGG | + | chr7_3:63459119-63459138 | Msa1115960:intron | 20.0% |
| !! | AACTAGTAATCTATTTATTC+GGG | + | chr7_3:63459226-63459245 | Msa1115960:intron | 20.0% |
| !! | TTAGTTAATTACTTACTTTC+AGG | - | chr7_3:63459538-63459557 | None:intergenic | 20.0% |
| !! | AATATACAATTATGCTTTGA+TGG | + | chr7_3:63460186-63460205 | Msa1115960:intron | 20.0% |
| !! | ATTGTCACTACAAATTTTCA+AGG | + | chr7_3:63458170-63458189 | Msa1115960:CDS | 25.0% |
| !! | GAATATAGTAATTTTCAGTC+TGG | + | chr7_3:63458464-63458483 | Msa1115960:CDS | 25.0% |
| !! | TCTCTGAAAAGAAATTTCAA+GGG | - | chr7_3:63458567-63458586 | None:intergenic | 25.0% |
| !! | TTCTCTGAAAAGAAATTTCA+AGG | - | chr7_3:63458568-63458587 | None:intergenic | 25.0% |
| !! | AATTTCTTTTCAGAGAACTA+AGG | + | chr7_3:63458571-63458590 | Msa1115960:CDS | 25.0% |
| !!! | TAGTCCTTTTAAGTATTTCA+TGG | + | chr7_3:63458786-63458805 | Msa1115960:intron | 25.0% |
| ! | AAGTTATGAGACTTATAGTT+GGG | + | chr7_3:63459104-63459123 | Msa1115960:intron | 25.0% |
| ! | TGGATTATAGCTTATTAGAA+AGG | - | chr7_3:63459337-63459356 | None:intergenic | 25.0% |
| ! | CAAATAAAAACAAGGTTGTA+AGG | - | chr7_3:63460274-63460293 | None:intergenic | 25.0% |
| !! | ATTGTCACTACAAATTTTCA+AGG | + | chr7_3:63458170-63458189 | Msa1115960:CDS | 25.0% |
| !! | GAATATAGTAATTTTCAGTC+TGG | + | chr7_3:63458464-63458483 | Msa1115960:CDS | 25.0% |
| !! | TCTCTGAAAAGAAATTTCAA+GGG | - | chr7_3:63458567-63458586 | None:intergenic | 25.0% |
| !! | TTCTCTGAAAAGAAATTTCA+AGG | - | chr7_3:63458568-63458587 | None:intergenic | 25.0% |
| !! | AATTTCTTTTCAGAGAACTA+AGG | + | chr7_3:63458571-63458590 | Msa1115960:CDS | 25.0% |
| !!! | TAGTCCTTTTAAGTATTTCA+TGG | + | chr7_3:63458786-63458805 | Msa1115960:intron | 25.0% |
| ! | AAGTTATGAGACTTATAGTT+GGG | + | chr7_3:63459104-63459123 | Msa1115960:intron | 25.0% |
| ! | TGGATTATAGCTTATTAGAA+AGG | - | chr7_3:63459337-63459356 | None:intergenic | 25.0% |
| ! | CAAATAAAAACAAGGTTGTA+AGG | - | chr7_3:63460274-63460293 | None:intergenic | 25.0% |
| AAAGATGTATGGAACTCAAT+GGG | + | chr7_3:63458043-63458062 | Msa1115960:CDS | 30.0% | |
| TAGGTTGTTAATTCCTATGT+AGG | - | chr7_3:63458072-63458091 | None:intergenic | 30.0% | |
| AGGAATTAACAACCTAGTTA+AGG | + | chr7_3:63458076-63458095 | Msa1115960:CDS | 30.0% | |
| AGGTGAAGAATATTATGATG+AGG | + | chr7_3:63458259-63458278 | Msa1115960:intron | 30.0% | |
| TGTAAAATTATCTCCTCCAT+AGG | - | chr7_3:63458360-63458379 | None:intergenic | 30.0% | |
| ! | CTCTGAAAAGAAATTTCAAG+GGG | - | chr7_3:63458566-63458585 | None:intergenic | 30.0% |
| TGGTTTCATCTATTTGTGAA+TGG | + | chr7_3:63458822-63458841 | Msa1115960:intron | 30.0% | |
| ! | AAATTTAGGGCTTTGTGAAA+GGG | + | chr7_3:63458953-63458972 | Msa1115960:intron | 30.0% |
| AAAGGGACAATAATGAATTG+CGG | + | chr7_3:63458970-63458989 | Msa1115960:intron | 30.0% | |
| ! | AAACATTCTTTTAACGGAGT+TGG | + | chr7_3:63459050-63459069 | Msa1115960:intron | 30.0% |
| CAACTATAAGTCTCATAACT+TGG | - | chr7_3:63459105-63459124 | None:intergenic | 30.0% | |
| CAAGTTATGAGACTTATAGT+TGG | + | chr7_3:63459103-63459122 | Msa1115960:intron | 30.0% | |
| CATGTAAAAGAAGAGTAAGA+TGG | + | chr7_3:63459461-63459480 | Msa1115960:CDS | 30.0% | |
| ! | TTCACTGATTATAATTGCAG+AGG | + | chr7_3:63459595-63459614 | Msa1115960:intron | 30.0% |
| ATCATATCTAGTATAGCCTT+AGG | - | chr7_3:63459626-63459645 | None:intergenic | 30.0% | |
| ! | ATGGCTTTTAACATGAGAAA+TGG | - | chr7_3:63459666-63459685 | None:intergenic | 30.0% |
| !! | GAAATAGTTTTACCTGCAAA+TGG | - | chr7_3:63459685-63459704 | None:intergenic | 30.0% |
| ACAATGTTAGAGTCAATTAC+CGG | - | chr7_3:63459759-63459778 | None:intergenic | 30.0% | |
| ACAACACTGCTTACTTATTA+AGG | + | chr7_3:63459869-63459888 | Msa1115960:intron | 30.0% | |
| !!! | TTTTTTCCTCTTCAGATTAC+TGG | + | chr7_3:63460050-63460069 | Msa1115960:intron | 30.0% |
| AAAAAACCAGTAATCTGAAG+AGG | - | chr7_3:63460059-63460078 | None:intergenic | 30.0% | |
| TTAAGCAAATTGAGGAATCA+CGG | + | chr7_3:63460116-63460135 | Msa1115960:CDS | 30.0% | |
| AAAGATGTATGGAACTCAAT+GGG | + | chr7_3:63458043-63458062 | Msa1115960:CDS | 30.0% | |
| TAGGTTGTTAATTCCTATGT+AGG | - | chr7_3:63458072-63458091 | None:intergenic | 30.0% | |
| AGGAATTAACAACCTAGTTA+AGG | + | chr7_3:63458076-63458095 | Msa1115960:CDS | 30.0% | |
| AGGTGAAGAATATTATGATG+AGG | + | chr7_3:63458259-63458278 | Msa1115960:intron | 30.0% | |
| TGTAAAATTATCTCCTCCAT+AGG | - | chr7_3:63458360-63458379 | None:intergenic | 30.0% | |
| ! | CTCTGAAAAGAAATTTCAAG+GGG | - | chr7_3:63458566-63458585 | None:intergenic | 30.0% |
| TGGTTTCATCTATTTGTGAA+TGG | + | chr7_3:63458822-63458841 | Msa1115960:intron | 30.0% | |
| ! | AAATTTAGGGCTTTGTGAAA+GGG | + | chr7_3:63458953-63458972 | Msa1115960:intron | 30.0% |
| AAAGGGACAATAATGAATTG+CGG | + | chr7_3:63458970-63458989 | Msa1115960:intron | 30.0% | |
| ! | AAACATTCTTTTAACGGAGT+TGG | + | chr7_3:63459050-63459069 | Msa1115960:intron | 30.0% |
| CAACTATAAGTCTCATAACT+TGG | - | chr7_3:63459105-63459124 | None:intergenic | 30.0% | |
| CAAGTTATGAGACTTATAGT+TGG | + | chr7_3:63459103-63459122 | Msa1115960:intron | 30.0% | |
| CATGTAAAAGAAGAGTAAGA+TGG | + | chr7_3:63459461-63459480 | Msa1115960:CDS | 30.0% | |
| ! | TTCACTGATTATAATTGCAG+AGG | + | chr7_3:63459595-63459614 | Msa1115960:intron | 30.0% |
| ATCATATCTAGTATAGCCTT+AGG | - | chr7_3:63459626-63459645 | None:intergenic | 30.0% | |
| ! | ATGGCTTTTAACATGAGAAA+TGG | - | chr7_3:63459666-63459685 | None:intergenic | 30.0% |
| !! | GAAATAGTTTTACCTGCAAA+TGG | - | chr7_3:63459685-63459704 | None:intergenic | 30.0% |
| ACAATGTTAGAGTCAATTAC+CGG | - | chr7_3:63459759-63459778 | None:intergenic | 30.0% | |
| ACAACACTGCTTACTTATTA+AGG | + | chr7_3:63459869-63459888 | Msa1115960:intron | 30.0% | |
| !!! | TTTTTTCCTCTTCAGATTAC+TGG | + | chr7_3:63460050-63460069 | Msa1115960:intron | 30.0% |
| AAAAAACCAGTAATCTGAAG+AGG | - | chr7_3:63460059-63460078 | None:intergenic | 30.0% | |
| TTAAGCAAATTGAGGAATCA+CGG | + | chr7_3:63460116-63460135 | Msa1115960:CDS | 30.0% | |
| CATACATCTTTGACCAATGT+TGG | - | chr7_3:63458034-63458053 | None:intergenic | 35.0% | |
| CAACATTGGTCAAAGATGTA+TGG | + | chr7_3:63458032-63458051 | Msa1115960:CDS | 35.0% | |
| CAAAGATGTATGGAACTCAA+TGG | + | chr7_3:63458042-63458061 | Msa1115960:CDS | 35.0% | |
| AACAACCTAGTTAAGGTTGT+TGG | + | chr7_3:63458083-63458102 | Msa1115960:CDS | 35.0% | |
| ACAACCTAGTTAAGGTTGTT+GGG | + | chr7_3:63458084-63458103 | Msa1115960:CDS | 35.0% | |
| TGTGTTCTGATCCAACAATT+TGG | - | chr7_3:63458115-63458134 | None:intergenic | 35.0% | |
| ! | CAAACATCTCATGATGGTTT+TGG | + | chr7_3:63458194-63458213 | Msa1115960:CDS | 35.0% |
| AGATTCATCAACAGAGTACA+AGG | - | chr7_3:63458402-63458421 | None:intergenic | 35.0% | |
| !!! | CATCATGTTTTTTCGGAAAG+TGG | - | chr7_3:63458508-63458527 | None:intergenic | 35.0% |
| TTGTGAATGGTGAATTGTGT+TGG | + | chr7_3:63458835-63458854 | Msa1115960:intron | 35.0% | |
| TGTGAATGGTGAATTGTGTT+GGG | + | chr7_3:63458836-63458855 | Msa1115960:intron | 35.0% | |
| !! | TGTTGGGTTGATTGTGATAT+GGG | + | chr7_3:63458852-63458871 | Msa1115960:intron | 35.0% |
| TTGTGATATGGGGAATAAGA+AGG | + | chr7_3:63458863-63458882 | Msa1115960:intron | 35.0% | |
| ! | GAAATTTAGGGCTTTGTGAA+AGG | + | chr7_3:63458952-63458971 | Msa1115960:intron | 35.0% |
| ! | ATTCTTTTAACGGAGTTGGA+TGG | + | chr7_3:63459054-63459073 | Msa1115960:intron | 35.0% |
| ATTTCTCCAACTCGTCAATT+AGG | + | chr7_3:63459274-63459293 | Msa1115960:intron | 35.0% | |
| CAATATCCTAATTGACGAGT+TGG | - | chr7_3:63459283-63459302 | None:intergenic | 35.0% | |
| ATCCATGACTTACTATAGTC+AGG | + | chr7_3:63459352-63459371 | Msa1115960:intron | 35.0% | |
| ATGATAATCGTTGATCACCT+TGG | + | chr7_3:63459508-63459527 | Msa1115960:CDS | 35.0% | |
| TCATGTTAAAAGCCATTTGC+AGG | + | chr7_3:63459670-63459689 | Msa1115960:CDS | 35.0% | |
| TTATCTTTCAGAAAGACCTG+AGG | + | chr7_3:63459920-63459939 | Msa1115960:intron | 35.0% | |
| ! | GTGATTCCTCAATTTGCTTA+AGG | - | chr7_3:63460117-63460136 | None:intergenic | 35.0% |
| AAGTATTTCGCAACAGTTAG+AGG | + | chr7_3:63460162-63460181 | Msa1115960:CDS | 35.0% | |
| GTTGTAAGGATATACGACTT+TGG | - | chr7_3:63460260-63460279 | None:intergenic | 35.0% | |
| GAACCAACCAAAGAAAATCA+TGG | + | chr7_3:63460382-63460401 | Msa1115960:CDS | 35.0% | |
| ! | TGTCCATGATTTTCTTTGGT+TGG | - | chr7_3:63460388-63460407 | None:intergenic | 35.0% |
| ! | GTTGTGTCCATGATTTTCTT+TGG | - | chr7_3:63460392-63460411 | None:intergenic | 35.0% |
| CATACATCTTTGACCAATGT+TGG | - | chr7_3:63458034-63458053 | None:intergenic | 35.0% | |
| CAACATTGGTCAAAGATGTA+TGG | + | chr7_3:63458032-63458051 | Msa1115960:CDS | 35.0% | |
| CAAAGATGTATGGAACTCAA+TGG | + | chr7_3:63458042-63458061 | Msa1115960:CDS | 35.0% | |
| AACAACCTAGTTAAGGTTGT+TGG | + | chr7_3:63458083-63458102 | Msa1115960:CDS | 35.0% | |
| ACAACCTAGTTAAGGTTGTT+GGG | + | chr7_3:63458084-63458103 | Msa1115960:CDS | 35.0% | |
| TGTGTTCTGATCCAACAATT+TGG | - | chr7_3:63458115-63458134 | None:intergenic | 35.0% | |
| ! | CAAACATCTCATGATGGTTT+TGG | + | chr7_3:63458194-63458213 | Msa1115960:CDS | 35.0% |
| AGATTCATCAACAGAGTACA+AGG | - | chr7_3:63458402-63458421 | None:intergenic | 35.0% | |
| !!! | CATCATGTTTTTTCGGAAAG+TGG | - | chr7_3:63458508-63458527 | None:intergenic | 35.0% |
| TTGTGAATGGTGAATTGTGT+TGG | + | chr7_3:63458835-63458854 | Msa1115960:intron | 35.0% | |
| TGTGAATGGTGAATTGTGTT+GGG | + | chr7_3:63458836-63458855 | Msa1115960:intron | 35.0% | |
| !! | TGTTGGGTTGATTGTGATAT+GGG | + | chr7_3:63458852-63458871 | Msa1115960:intron | 35.0% |
| TTGTGATATGGGGAATAAGA+AGG | + | chr7_3:63458863-63458882 | Msa1115960:intron | 35.0% | |
| ! | GAAATTTAGGGCTTTGTGAA+AGG | + | chr7_3:63458952-63458971 | Msa1115960:intron | 35.0% |
| ! | ATTCTTTTAACGGAGTTGGA+TGG | + | chr7_3:63459054-63459073 | Msa1115960:intron | 35.0% |
| ATTTCTCCAACTCGTCAATT+AGG | + | chr7_3:63459274-63459293 | Msa1115960:intron | 35.0% | |
| CAATATCCTAATTGACGAGT+TGG | - | chr7_3:63459283-63459302 | None:intergenic | 35.0% | |
| ATCCATGACTTACTATAGTC+AGG | + | chr7_3:63459352-63459371 | Msa1115960:intron | 35.0% | |
| ATGATAATCGTTGATCACCT+TGG | + | chr7_3:63459508-63459527 | Msa1115960:CDS | 35.0% | |
| TCATGTTAAAAGCCATTTGC+AGG | + | chr7_3:63459670-63459689 | Msa1115960:CDS | 35.0% | |
| TTATCTTTCAGAAAGACCTG+AGG | + | chr7_3:63459920-63459939 | Msa1115960:intron | 35.0% | |
| ! | GTGATTCCTCAATTTGCTTA+AGG | - | chr7_3:63460117-63460136 | None:intergenic | 35.0% |
| AAGTATTTCGCAACAGTTAG+AGG | + | chr7_3:63460162-63460181 | Msa1115960:CDS | 35.0% | |
| GTTGTAAGGATATACGACTT+TGG | - | chr7_3:63460260-63460279 | None:intergenic | 35.0% | |
| GAACCAACCAAAGAAAATCA+TGG | + | chr7_3:63460382-63460401 | Msa1115960:CDS | 35.0% | |
| ! | TGTCCATGATTTTCTTTGGT+TGG | - | chr7_3:63460388-63460407 | None:intergenic | 35.0% |
| ! | GTTGTGTCCATGATTTTCTT+TGG | - | chr7_3:63460392-63460411 | None:intergenic | 35.0% |
| ACTCAATGGGAATCCTACAT+AGG | + | chr7_3:63458056-63458075 | Msa1115960:CDS | 40.0% | |
| GTAGTGACAATGTTGTTGCA+GGG | - | chr7_3:63458161-63458180 | None:intergenic | 40.0% | |
| TGTAGTGACAATGTTGTTGC+AGG | - | chr7_3:63458162-63458181 | None:intergenic | 40.0% | |
| CAAGGTCAAACATCTCATGA+TGG | + | chr7_3:63458188-63458207 | Msa1115960:CDS | 40.0% | |
| ATGAGATTGAAGTTCCTGGT+TGG | + | chr7_3:63458282-63458301 | Msa1115960:CDS | 40.0% | |
| AACTGATCAAAACACCAACC+AGG | - | chr7_3:63458299-63458318 | None:intergenic | 40.0% | |
| ATTGGAGGGTCTGTTATCTT+TGG | - | chr7_3:63458323-63458342 | None:intergenic | 40.0% | |
| ! | CTTGACAATTCAGCATTGGA+GGG | - | chr7_3:63458337-63458356 | None:intergenic | 40.0% |
| TAGGCTTGACAATTCAGCAT+TGG | - | chr7_3:63458341-63458360 | None:intergenic | 40.0% | |
| ATGCTGAATTGTCAAGCCTA+TGG | + | chr7_3:63458341-63458360 | Msa1115960:CDS | 40.0% | |
| !! | GTGTTGGGTTGATTGTGATA+TGG | + | chr7_3:63458851-63458870 | Msa1115960:intron | 40.0% |
| !! | GTTGGGTTGATTGTGATATG+GGG | + | chr7_3:63458853-63458872 | Msa1115960:intron | 40.0% |
| GGACAATAATGAATTGCGGA+GGG | + | chr7_3:63458974-63458993 | Msa1115960:intron | 40.0% | |
| ATAATGAATTGCGGAGGGTA+AGG | + | chr7_3:63458979-63458998 | Msa1115960:intron | 40.0% | |
| TAATGAATTGCGGAGGGTAA+GGG | + | chr7_3:63458980-63458999 | Msa1115960:intron | 40.0% | |
| TAATCGACGTAATAGCGCTT+TGG | - | chr7_3:63459149-63459168 | None:intergenic | 40.0% | |
| ! | AGCGCTATTACGTCGATTAA+AGG | + | chr7_3:63459150-63459169 | Msa1115960:intron | 40.0% |
| ! | GCGCTATTACGTCGATTAAA+GGG | + | chr7_3:63459151-63459170 | Msa1115960:intron | 40.0% |
| ! | GACGAGTTGGAGAAATTGTT+AGG | - | chr7_3:63459270-63459289 | None:intergenic | 40.0% |
| AGCCTGACTATAGTAAGTCA+TGG | - | chr7_3:63459357-63459376 | None:intergenic | 40.0% | |
| AAGCAGACTCCTCAACTTTA+TGG | + | chr7_3:63459394-63459413 | Msa1115960:CDS | 40.0% | |
| GCACACATTCCATAAAGTTG+AGG | - | chr7_3:63459406-63459425 | None:intergenic | 40.0% | |
| AGAAGCAGAGTTGTTAGAAG+TGG | - | chr7_3:63459428-63459447 | None:intergenic | 40.0% | |
| CTTCTAACAACTCTGCTTCT+AGG | + | chr7_3:63459428-63459447 | Msa1115960:CDS | 40.0% | |
| AAGAAGAGTAAGATGGACAG+AGG | + | chr7_3:63459468-63459487 | Msa1115960:CDS | 40.0% | |
| ATAATCGTTGATCACCTTGG+TGG | + | chr7_3:63459511-63459530 | Msa1115960:CDS | 40.0% | |
| TGTAGATCGACATTTCTGCA+CGG | - | chr7_3:63459795-63459814 | None:intergenic | 40.0% | |
| ! | TCAATTTGCTTAAGGCTGCT+AGG | - | chr7_3:63460109-63460128 | None:intergenic | 40.0% |
| TAGCAGCCTTAAGCAAATTG+AGG | + | chr7_3:63460108-63460127 | Msa1115960:intron | 40.0% | |
| GCAACTTTCTTTGCGTCTAA+AGG | - | chr7_3:63460311-63460330 | None:intergenic | 40.0% | |
| AATCATGGACACAACGAGAA+AGG | + | chr7_3:63460397-63460416 | Msa1115960:CDS | 40.0% | |
| ACTCAATGGGAATCCTACAT+AGG | + | chr7_3:63458056-63458075 | Msa1115960:CDS | 40.0% | |
| GTAGTGACAATGTTGTTGCA+GGG | - | chr7_3:63458161-63458180 | None:intergenic | 40.0% | |
| TGTAGTGACAATGTTGTTGC+AGG | - | chr7_3:63458162-63458181 | None:intergenic | 40.0% | |
| CAAGGTCAAACATCTCATGA+TGG | + | chr7_3:63458188-63458207 | Msa1115960:CDS | 40.0% | |
| ATGAGATTGAAGTTCCTGGT+TGG | + | chr7_3:63458282-63458301 | Msa1115960:CDS | 40.0% | |
| AACTGATCAAAACACCAACC+AGG | - | chr7_3:63458299-63458318 | None:intergenic | 40.0% | |
| ATTGGAGGGTCTGTTATCTT+TGG | - | chr7_3:63458323-63458342 | None:intergenic | 40.0% | |
| ! | CTTGACAATTCAGCATTGGA+GGG | - | chr7_3:63458337-63458356 | None:intergenic | 40.0% |
| TAGGCTTGACAATTCAGCAT+TGG | - | chr7_3:63458341-63458360 | None:intergenic | 40.0% | |
| ATGCTGAATTGTCAAGCCTA+TGG | + | chr7_3:63458341-63458360 | Msa1115960:CDS | 40.0% | |
| !! | GTGTTGGGTTGATTGTGATA+TGG | + | chr7_3:63458851-63458870 | Msa1115960:intron | 40.0% |
| !! | GTTGGGTTGATTGTGATATG+GGG | + | chr7_3:63458853-63458872 | Msa1115960:intron | 40.0% |
| GGACAATAATGAATTGCGGA+GGG | + | chr7_3:63458974-63458993 | Msa1115960:intron | 40.0% | |
| ATAATGAATTGCGGAGGGTA+AGG | + | chr7_3:63458979-63458998 | Msa1115960:intron | 40.0% | |
| TAATGAATTGCGGAGGGTAA+GGG | + | chr7_3:63458980-63458999 | Msa1115960:intron | 40.0% | |
| TAATCGACGTAATAGCGCTT+TGG | - | chr7_3:63459149-63459168 | None:intergenic | 40.0% | |
| ! | AGCGCTATTACGTCGATTAA+AGG | + | chr7_3:63459150-63459169 | Msa1115960:intron | 40.0% |
| ! | GCGCTATTACGTCGATTAAA+GGG | + | chr7_3:63459151-63459170 | Msa1115960:intron | 40.0% |
| ! | GACGAGTTGGAGAAATTGTT+AGG | - | chr7_3:63459270-63459289 | None:intergenic | 40.0% |
| AGCCTGACTATAGTAAGTCA+TGG | - | chr7_3:63459357-63459376 | None:intergenic | 40.0% | |
| AAGCAGACTCCTCAACTTTA+TGG | + | chr7_3:63459394-63459413 | Msa1115960:CDS | 40.0% | |
| GCACACATTCCATAAAGTTG+AGG | - | chr7_3:63459406-63459425 | None:intergenic | 40.0% | |
| AGAAGCAGAGTTGTTAGAAG+TGG | - | chr7_3:63459428-63459447 | None:intergenic | 40.0% | |
| CTTCTAACAACTCTGCTTCT+AGG | + | chr7_3:63459428-63459447 | Msa1115960:CDS | 40.0% | |
| AAGAAGAGTAAGATGGACAG+AGG | + | chr7_3:63459468-63459487 | Msa1115960:CDS | 40.0% | |
| ATAATCGTTGATCACCTTGG+TGG | + | chr7_3:63459511-63459530 | Msa1115960:CDS | 40.0% | |
| TGTAGATCGACATTTCTGCA+CGG | - | chr7_3:63459795-63459814 | None:intergenic | 40.0% | |
| ! | TCAATTTGCTTAAGGCTGCT+AGG | - | chr7_3:63460109-63460128 | None:intergenic | 40.0% |
| TAGCAGCCTTAAGCAAATTG+AGG | + | chr7_3:63460108-63460127 | Msa1115960:intron | 40.0% | |
| GCAACTTTCTTTGCGTCTAA+AGG | - | chr7_3:63460311-63460330 | None:intergenic | 40.0% | |
| AATCATGGACACAACGAGAA+AGG | + | chr7_3:63460397-63460416 | Msa1115960:CDS | 40.0% | |
| CTGACCCAACAACCTTAACT+AGG | - | chr7_3:63458091-63458110 | None:intergenic | 45.0% | |
| GTTGGGTCAGACCAAATTGT+TGG | + | chr7_3:63458101-63458120 | Msa1115960:CDS | 45.0% | |
| TTGTTGCAGGGTGACTTGAT+TGG | - | chr7_3:63458149-63458168 | None:intergenic | 45.0% | |
| GAGGATGAGATTGAAGTTCC+TGG | + | chr7_3:63458278-63458297 | Msa1115960:CDS | 45.0% | |
| ! | GCTTGACAATTCAGCATTGG+AGG | - | chr7_3:63458338-63458357 | None:intergenic | 45.0% |
| CTGAATTGTCAAGCCTATGG+AGG | + | chr7_3:63458344-63458363 | Msa1115960:CDS | 45.0% | |
| CAAGGAGTTTGTGAACTGAG+AGG | - | chr7_3:63458384-63458403 | None:intergenic | 45.0% | |
| TTCAAGGGGCTTCTCATCAA+TGG | - | chr7_3:63458552-63458571 | None:intergenic | 45.0% | |
| GGGACAATAATGAATTGCGG+AGG | + | chr7_3:63458973-63458992 | Msa1115960:intron | 45.0% | |
| !!! | CTTTTGTTTTCGCACATGCG+TGG | - | chr7_3:63459201-63459220 | None:intergenic | 45.0% |
| ACTTACTTTCAGGACCACCA+AGG | - | chr7_3:63459528-63459547 | None:intergenic | 45.0% | |
| AATTGCAGAGGCAAAGCCTA+AGG | + | chr7_3:63459607-63459626 | Msa1115960:intron | 45.0% | |
| TTCTGTGAAGCCTCATTTGC+CGG | + | chr7_3:63459737-63459756 | Msa1115960:intron | 45.0% | |
| GAGTCAATTACCGGCAAATG+AGG | - | chr7_3:63459750-63459769 | None:intergenic | 45.0% | |
| CTTTCAGAAAGACCTGAGGA+AGG | + | chr7_3:63459924-63459943 | Msa1115960:intron | 45.0% | |
| TCTGTTCTATGTCCTTCCTC+AGG | - | chr7_3:63459939-63459958 | None:intergenic | 45.0% | |
| GCTTAAGGCTGCTAGGAAAT+AGG | - | chr7_3:63460102-63460121 | None:intergenic | 45.0% | |
| CTGACCCAACAACCTTAACT+AGG | - | chr7_3:63458091-63458110 | None:intergenic | 45.0% | |
| GTTGGGTCAGACCAAATTGT+TGG | + | chr7_3:63458101-63458120 | Msa1115960:CDS | 45.0% | |
| TTGTTGCAGGGTGACTTGAT+TGG | - | chr7_3:63458149-63458168 | None:intergenic | 45.0% | |
| GAGGATGAGATTGAAGTTCC+TGG | + | chr7_3:63458278-63458297 | Msa1115960:CDS | 45.0% | |
| ! | GCTTGACAATTCAGCATTGG+AGG | - | chr7_3:63458338-63458357 | None:intergenic | 45.0% |
| CTGAATTGTCAAGCCTATGG+AGG | + | chr7_3:63458344-63458363 | Msa1115960:CDS | 45.0% | |
| CAAGGAGTTTGTGAACTGAG+AGG | - | chr7_3:63458384-63458403 | None:intergenic | 45.0% | |
| TTCAAGGGGCTTCTCATCAA+TGG | - | chr7_3:63458552-63458571 | None:intergenic | 45.0% | |
| GGGACAATAATGAATTGCGG+AGG | + | chr7_3:63458973-63458992 | Msa1115960:intron | 45.0% | |
| !!! | CTTTTGTTTTCGCACATGCG+TGG | - | chr7_3:63459201-63459220 | None:intergenic | 45.0% |
| ACTTACTTTCAGGACCACCA+AGG | - | chr7_3:63459528-63459547 | None:intergenic | 45.0% | |
| AATTGCAGAGGCAAAGCCTA+AGG | + | chr7_3:63459607-63459626 | Msa1115960:intron | 45.0% | |
| TTCTGTGAAGCCTCATTTGC+CGG | + | chr7_3:63459737-63459756 | Msa1115960:intron | 45.0% | |
| GAGTCAATTACCGGCAAATG+AGG | - | chr7_3:63459750-63459769 | None:intergenic | 45.0% | |
| CTTTCAGAAAGACCTGAGGA+AGG | + | chr7_3:63459924-63459943 | Msa1115960:intron | 45.0% | |
| TCTGTTCTATGTCCTTCCTC+AGG | - | chr7_3:63459939-63459958 | None:intergenic | 45.0% | |
| GCTTAAGGCTGCTAGGAAAT+AGG | - | chr7_3:63460102-63460121 | None:intergenic | 45.0% | |
| TTTCGCACATGCGTGGCTTT+AGG | - | chr7_3:63459194-63459213 | None:intergenic | 50.0% | |
| ACGCGTGCATAAAGCTTTGC+AGG | + | chr7_3:63459817-63459836 | Msa1115960:CDS | 50.0% | |
| CGCGTGCATAAAGCTTTGCA+GGG | + | chr7_3:63459818-63459837 | Msa1115960:CDS | 50.0% | |
| ATCACGGCAGTTGCATCTAG+AGG | + | chr7_3:63460132-63460151 | Msa1115960:CDS | 50.0% | |
| TTTCGCACATGCGTGGCTTT+AGG | - | chr7_3:63459194-63459213 | None:intergenic | 50.0% | |
| ACGCGTGCATAAAGCTTTGC+AGG | + | chr7_3:63459817-63459836 | Msa1115960:CDS | 50.0% | |
| CGCGTGCATAAAGCTTTGCA+GGG | + | chr7_3:63459818-63459837 | Msa1115960:CDS | 50.0% | |
| ATCACGGCAGTTGCATCTAG+AGG | + | chr7_3:63460132-63460151 | Msa1115960:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 63458026 | 63460434 | 63458026 | ID=Msa1115960;Name=Msa1115960 |
| chr7_3 | mRNA | 63458026 | 63460434 | 63458026 | ID=Msa1115960-mRNA-1;Parent=Msa1115960;Name=Msa1115960-mRNA-1;_AED=0.07;_eAED=0.09;_QI=0|0|0|1|0.62|0.55|9|0|359 |
| chr7_3 | exon | 63458026 | 63458242 | 63458026 | ID=Msa1115960-mRNA-1:exon:14875;Parent=Msa1115960-mRNA-1 |
| chr7_3 | exon | 63458261 | 63458434 | 63458261 | ID=Msa1115960-mRNA-1:exon:14876;Parent=Msa1115960-mRNA-1 |
| chr7_3 | exon | 63458441 | 63458592 | 63458441 | ID=Msa1115960-mRNA-1:exon:14877;Parent=Msa1115960-mRNA-1 |
| chr7_3 | exon | 63459370 | 63459541 | 63459370 | ID=Msa1115960-mRNA-1:exon:14878;Parent=Msa1115960-mRNA-1 |
| chr7_3 | exon | 63459615 | 63459691 | 63459615 | ID=Msa1115960-mRNA-1:exon:14879;Parent=Msa1115960-mRNA-1 |
| chr7_3 | exon | 63459800 | 63459839 | 63459800 | ID=Msa1115960-mRNA-1:exon:14880;Parent=Msa1115960-mRNA-1 |
| chr7_3 | exon | 63459931 | 63459985 | 63459931 | ID=Msa1115960-mRNA-1:exon:14881;Parent=Msa1115960-mRNA-1 |
| chr7_3 | exon | 63460111 | 63460183 | 63460111 | ID=Msa1115960-mRNA-1:exon:14882;Parent=Msa1115960-mRNA-1 |
| chr7_3 | exon | 63460315 | 63460434 | 63460315 | ID=Msa1115960-mRNA-1:exon:14883;Parent=Msa1115960-mRNA-1 |
| chr7_3 | CDS | 63458026 | 63458242 | 63458026 | ID=Msa1115960-mRNA-1:cds;Parent=Msa1115960-mRNA-1 |
| chr7_3 | CDS | 63458261 | 63458434 | 63458261 | ID=Msa1115960-mRNA-1:cds;Parent=Msa1115960-mRNA-1 |
| chr7_3 | CDS | 63458441 | 63458592 | 63458441 | ID=Msa1115960-mRNA-1:cds;Parent=Msa1115960-mRNA-1 |
| chr7_3 | CDS | 63459370 | 63459541 | 63459370 | ID=Msa1115960-mRNA-1:cds;Parent=Msa1115960-mRNA-1 |
| chr7_3 | CDS | 63459615 | 63459691 | 63459615 | ID=Msa1115960-mRNA-1:cds;Parent=Msa1115960-mRNA-1 |
| chr7_3 | CDS | 63459800 | 63459839 | 63459800 | ID=Msa1115960-mRNA-1:cds;Parent=Msa1115960-mRNA-1 |
| chr7_3 | CDS | 63459931 | 63459985 | 63459931 | ID=Msa1115960-mRNA-1:cds;Parent=Msa1115960-mRNA-1 |
| chr7_3 | CDS | 63460111 | 63460183 | 63460111 | ID=Msa1115960-mRNA-1:cds;Parent=Msa1115960-mRNA-1 |
| chr7_3 | CDS | 63460315 | 63460434 | 63460315 | ID=Msa1115960-mRNA-1:cds;Parent=Msa1115960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
