AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1117190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1117190 MtrunA17_Chr7g0259711 94.268 157 9 0 5 161 295 451 1.60e-108 316
Msa1117190 MtrunA17_Chr2g0287901 54.225 142 60 2 5 144 301 439 3.37e-51 169
Msa1117190 MtrunA17_Chr4g0071391 41.497 147 79 3 5 149 312 453 1.06e-31 117
Msa1117190 MtrunA17_Chr1g0175671 41.216 148 80 4 1 145 369 512 1.25e-31 118
Msa1117190 MtrunA17_Chr7g0258851 41.250 160 86 5 1 157 447 601 1.75e-31 118
Msa1117190 MtrunA17_Chr5g0413271 40.385 156 68 3 1 144 336 478 2.79e-30 114
Msa1117190 MtrunA17_Chr8g0368461 39.735 151 74 3 2 144 389 530 1.34e-29 112
Msa1117190 MtrunA17_Chr7g0269991 39.568 139 75 2 9 147 343 472 1.45e-28 109
Msa1117190 MtrunA17_Chr4g0005491 37.736 159 79 5 1 145 258 410 1.11e-27 106
Msa1117190 MtrunA17_Chr1g0213281 39.855 138 65 5 15 143 388 516 1.86e-27 106
Msa1117190 MtrunA17_Chr4g0068111 39.286 140 78 3 6 143 320 454 5.81e-26 102
Msa1117190 MtrunA17_Chr7g0243301 36.025 161 79 6 1 145 260 412 2.76e-25 99.8
Msa1117190 MtrunA17_Chr3g0091031 39.007 141 72 3 2 140 218 346 3.39e-25 99.0
Msa1117190 MtrunA17_Chr8g0360521 35.714 154 77 5 5 144 266 411 4.88e-24 96.7
Msa1117190 MtrunA17_Chr3g0113671 33.784 148 87 4 5 143 305 450 2.38e-23 94.7
Msa1117190 MtrunA17_Chr5g0430371 32.911 158 73 5 9 143 253 400 2.60e-23 94.4
Msa1117190 MtrunA17_Chr3g0085081 38.298 141 73 3 2 140 218 346 4.73e-23 93.2
Msa1117190 MtrunA17_Chr4g0006991 35.570 149 79 4 5 142 285 427 5.20e-23 94.0
Msa1117190 MtrunA17_Chr4g0005481 38.776 147 75 6 6 142 305 446 1.00e-22 93.2
Msa1117190 MtrunA17_Chr3g0114101 32.877 146 89 4 5 143 288 431 1.75e-22 92.4
Msa1117190 MtrunA17_Chr3g0085071 34.752 141 78 3 2 140 233 361 1.77e-22 91.7
Msa1117190 MtrunA17_Chr5g0437291 33.557 149 90 3 5 145 367 514 2.31e-22 92.4
Msa1117190 MtrunA17_Chr4g0041011 38.971 136 68 5 9 142 241 363 3.42e-22 90.9
Msa1117190 MtrunA17_Chr5g0437601 33.562 146 88 4 5 143 282 425 2.49e-21 89.0
Msa1117190 MtrunA17_Chr8g0384151 34.416 154 84 5 5 156 294 432 6.47e-21 88.2
Msa1117190 MtrunA17_Chr2g0314791 36.364 143 72 5 2 144 224 347 6.68e-21 87.4
Msa1117190 MtrunA17_Chr7g0242701 36.242 149 78 5 5 142 285 427 8.96e-21 87.4
Msa1117190 MtrunA17_Chr5g0414081 34.752 141 79 5 20 151 72 208 1.20e-20 84.3
Msa1117190 MtrunA17_Chr2g0325481 39.416 137 68 5 9 143 244 367 1.50e-20 86.7
Msa1117190 MtrunA17_Chr1g0171171 36.111 144 82 3 1 142 240 375 3.40e-20 85.5
Msa1117190 MtrunA17_Chr1g0178081 39.815 108 59 3 40 146 243 345 4.79e-20 85.1
Msa1117190 MtrunA17_Chr4g0070341 35.036 137 76 4 7 142 347 471 1.38e-19 84.3
Msa1117190 MtrunA17_Chr2g0283581 38.462 143 74 5 2 142 228 358 2.23e-19 83.2
Msa1117190 MtrunA17_Chr4g0045951 37.956 137 71 4 9 143 239 363 2.32e-19 83.2
Msa1117190 MtrunA17_Chr2g0314801 36.111 144 78 4 2 142 221 353 2.43e-19 83.2
Msa1117190 MtrunA17_Chr8g0384421 32.168 143 84 3 1 142 342 472 2.50e-19 83.6
Msa1117190 MtrunA17_Chr4g0049421 32.450 151 87 5 1 143 250 393 3.81e-19 82.8
Msa1117190 MtrunA17_Chr4g0045941 36.170 141 68 5 9 143 227 351 1.41e-18 80.9
Msa1117190 MtrunA17_Chr3g0105301 33.333 144 83 5 9 143 238 377 1.95e-18 80.9
Msa1117190 MtrunA17_Chr6g0451321 31.818 154 86 6 3 145 315 460 2.72e-18 80.9
Msa1117190 MtrunA17_Chr5g0413851 34.694 147 74 6 5 144 230 361 3.32e-18 80.1
Msa1117190 MtrunA17_Chr3g0097891 35.811 148 75 5 2 143 218 351 3.38e-18 79.7
Msa1117190 MtrunA17_Chr1g0210771 35.616 146 73 5 5 142 250 382 3.80e-18 80.1
Msa1117190 MtrunA17_Chr3g0126021 34.266 143 79 4 3 145 335 462 1.17e-17 79.0
Msa1117190 MtrunA17_Chr3g0140371 34.507 142 77 7 16 146 228 364 1.96e-17 77.8
Msa1117190 MtrunA17_Chr1g0188191 29.221 154 92 4 5 145 435 584 2.08e-17 78.2
Msa1117190 MtrunA17_Chr7g0226991 31.210 157 93 7 1 148 258 408 5.28e-17 77.0
Msa1117190 MtrunA17_Chr6g0456691 34.028 144 75 3 24 156 299 433 1.26e-16 75.9
Msa1117190 MtrunA17_Chr6g0476041 28.931 159 101 5 5 153 368 524 1.29e-16 75.9
Msa1117190 MtrunA17_Chr8g0391481 33.094 139 80 6 20 149 245 379 3.39e-16 74.3
Msa1117190 MtrunA17_Chr8g0347321 34.694 147 84 6 5 143 298 440 8.22e-16 73.6
Msa1117190 MtrunA17_Chr3g0085101 34.959 123 66 3 2 122 4 114 8.35e-16 69.3
Msa1117190 MtrunA17_Chr6g0456681 31.496 127 73 4 24 142 288 408 2.09e-15 72.4
Msa1117190 MtrunA17_Chr8g0387921 31.973 147 88 5 5 143 278 420 2.48e-15 72.0
Msa1117190 MtrunA17_Chr1g0209931 39.604 101 48 5 48 148 11 98 1.04e-14 65.9
Msa1117190 MtrunA17_Chr6g0455901 29.787 141 80 4 9 142 288 416 1.79e-14 69.7
Msa1117190 MtrunA17_Chr5g0414091 31.884 138 79 7 16 142 298 431 4.56e-14 68.6
Msa1117190 MtrunA17_Chr5g0414051 31.429 140 81 8 16 144 287 422 2.69e-13 66.2
Msa1117190 MtrunA17_Chr7g0221281 31.452 124 77 3 24 142 116 236 8.70e-13 64.3
Msa1117190 MtrunA17_Chr5g0414041 33.333 138 81 7 16 144 300 435 5.01e-12 62.8
Msa1117190 MtrunA17_Chr5g0414061 28.767 146 88 8 9 144 301 440 3.33e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1117190 AT3G06080.2 56.552 145 60 2 5 147 307 450 4.68e-56 182
Msa1117190 AT5G19160.1 55.333 150 61 3 5 149 303 451 1.76e-53 176
Msa1117190 AT5G20590.1 45.714 140 71 2 5 143 345 480 1.78e-32 120
Msa1117190 AT5G06230.2 43.885 139 66 4 9 143 235 365 4.14e-31 115
Msa1117190 AT5G06230.1 43.885 139 66 4 9 143 276 406 5.95e-31 115
Msa1117190 AT1G60790.1 38.217 157 71 3 1 144 391 534 1.44e-30 115
Msa1117190 AT5G06700.1 38.514 148 80 3 1 143 454 595 1.70e-29 113
Msa1117190 AT3G12060.1 37.736 159 82 3 5 150 399 553 3.17e-29 112
Msa1117190 AT3G62390.1 41.549 142 77 2 5 146 340 475 6.05e-29 110
Msa1117190 AT5G49340.1 41.497 147 69 4 5 143 305 442 1.06e-28 110
Msa1117190 AT3G11570.1 38.194 144 83 4 1 143 282 420 1.10e-28 109
Msa1117190 AT1G78710.1 40.278 144 73 4 2 143 225 357 5.39e-27 104
Msa1117190 AT1G73140.1 38.217 157 69 6 5 144 262 407 3.87e-26 102
Msa1117190 AT2G40160.2 34.667 150 89 3 5 146 279 427 8.81e-25 99.4
Msa1117190 AT3G11030.1 34.899 149 83 5 5 143 305 449 3.00e-24 97.8
Msa1117190 AT2G40160.1 32.886 149 91 3 5 145 279 426 2.86e-23 94.7
Msa1117190 AT2G30900.1 36.242 149 74 4 2 143 232 366 1.79e-22 92.0
Msa1117190 AT2G38320.2 35.849 159 78 7 1 143 172 322 2.48e-22 91.3
Msa1117190 AT2G38320.1 35.849 159 78 7 1 143 255 405 4.73e-22 91.3
Msa1117190 AT3G55990.1 35.065 154 81 6 5 145 339 486 6.63e-22 91.3
Msa1117190 AT2G40150.1 32.258 155 92 3 5 146 270 424 6.75e-22 91.3
Msa1117190 AT5G64470.2 36.424 151 81 4 1 143 258 401 1.66e-21 89.7
Msa1117190 AT5G20680.4 38.793 116 59 3 27 142 448 551 1.85e-21 90.1
Msa1117190 AT5G20680.1 38.793 116 59 3 27 142 448 551 1.85e-21 90.1
Msa1117190 AT5G20680.3 38.793 116 59 3 27 142 448 551 1.85e-21 90.1
Msa1117190 AT5G20680.5 38.793 116 59 3 27 142 448 551 1.85e-21 90.1
Msa1117190 AT5G20680.2 38.793 116 59 3 27 142 430 533 1.86e-21 90.1
Msa1117190 AT5G20680.6 38.793 116 59 3 27 142 354 457 2.08e-21 89.7
Msa1117190 AT2G34070.2 39.161 143 72 5 2 142 120 249 2.17e-21 87.4
Msa1117190 AT5G01620.3 37.584 149 74 7 6 142 316 457 2.25e-21 89.7
Msa1117190 AT5G01620.2 37.584 149 74 7 6 142 308 449 2.29e-21 89.7
Msa1117190 AT5G01620.1 37.584 149 74 7 6 142 308 449 2.29e-21 89.7
Msa1117190 AT5G58600.1 36.552 145 77 4 9 143 262 401 3.47e-21 89.0
Msa1117190 AT5G01360.2 35.762 151 77 5 5 142 235 378 3.54e-21 88.6
Msa1117190 AT5G01360.1 35.762 151 77 5 5 142 291 434 4.98e-21 88.6
Msa1117190 AT1G48880.1 36.879 141 72 3 5 145 319 442 6.82e-21 88.6
Msa1117190 AT2G34070.1 39.161 143 72 5 2 142 254 383 1.01e-20 87.4
Msa1117190 AT2G30010.2 35.135 148 79 5 9 143 297 440 2.22e-20 87.0
Msa1117190 AT2G40320.1 33.108 148 86 6 5 143 280 423 2.38e-20 86.7
Msa1117190 AT2G30010.1 35.135 148 79 5 9 143 254 397 2.42e-20 86.7
Msa1117190 AT1G29050.1 39.706 136 67 4 9 142 256 378 3.09e-20 86.3
Msa1117190 AT1G01430.1 36.250 160 81 8 2 146 298 451 3.74e-20 86.3
Msa1117190 AT2G31110.1 35.664 143 78 4 2 142 84 214 4.38e-20 83.2
Msa1117190 AT5G64470.3 34.459 148 82 4 1 143 258 395 6.05e-20 85.5
Msa1117190 AT3G02440.2 37.500 128 71 3 24 145 355 479 2.18e-19 84.3
Msa1117190 AT3G02440.1 37.500 128 71 3 24 145 347 471 2.71e-19 84.0
Msa1117190 AT2G31110.2 35.664 143 78 4 2 142 232 362 3.37e-19 83.2
Msa1117190 AT1G78710.2 44.860 107 46 4 39 143 202 297 6.54e-19 81.6
Msa1117190 AT3G14850.1 31.507 146 87 4 2 144 118 253 2.21e-18 79.3
Msa1117190 AT4G01080.1 39.394 132 70 6 23 146 305 434 7.42e-18 79.7
Msa1117190 AT3G14850.2 31.507 146 87 4 2 144 221 356 7.80e-18 79.3
Msa1117190 AT5G51640.1 27.586 174 94 6 5 157 339 501 1.49e-17 79.0
Msa1117190 AT3G54260.1 33.333 147 77 5 5 143 242 375 2.65e-17 78.2
Msa1117190 AT2G42570.1 31.387 137 80 4 9 143 241 365 1.00e-16 76.3
Msa1117190 AT4G23790.1 33.333 147 88 5 5 143 284 428 2.94e-16 75.1
Msa1117190 AT4G25360.1 28.571 161 94 5 5 149 376 531 3.89e-16 75.1
Msa1117190 AT4G25360.2 28.571 161 94 5 5 149 376 531 3.89e-16 75.1
Msa1117190 AT4G11090.1 30.612 147 90 4 5 143 284 426 4.44e-16 74.7
Msa1117190 AT2G14530.1 32.215 149 79 6 9 148 277 412 6.72e-16 74.3
Msa1117190 AT5G64020.1 29.530 149 76 4 9 142 274 408 7.19e-16 73.9
Msa1117190 AT1G70230.1 33.333 132 83 4 18 147 288 416 1.96e-15 72.8
Msa1117190 AT5G15890.1 34.127 126 71 4 24 142 402 522 6.66e-15 71.6
Msa1117190 AT3G28150.1 35.338 133 67 7 19 142 288 410 8.10e-14 68.2
Msa1117190 AT5G15900.1 34.109 129 74 4 24 146 290 413 2.21e-12 64.3
Msa1117190 AT5G15900.2 34.109 129 74 4 24 146 309 432 2.33e-12 63.9

Find 142 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGGCAAGTTGCAATCTT+TGG 0.156314 7_3:-65477593 None:intergenic
TTCTTCAAATTGTTCCTTCT+TGG 0.158845 7_3:+65477504 Msa1117190:five_prime_UTR
CTTATGCTCCTGTCCATTTC+AGG 0.199718 7_3:+65479455 Msa1117190:CDS
CTCCTCATGGGGCACCTTAC+CGG 0.208657 7_3:+65478824 Msa1117190:five_prime_UTR
TCTTCACTTCCTCCCCTATT+TGG 0.229817 7_3:-65479323 None:intergenic
AAGCCTGTGTGCTTTGTAAT+TGG 0.240652 7_3:-65478724 None:intergenic
AGGGGTTGTTACTTCCAAAT+AGG 0.244168 7_3:+65479309 Msa1117190:intron
CATGAAGTTGGGAGCTAAAT+TGG 0.247825 7_3:+65480894 Msa1117190:three_prime_UTR
TTGTGGTCAGATTCACTAAT+TGG 0.249846 7_3:+65480923 Msa1117190:three_prime_UTR
CATCCCAAATTAATCTAAAA+TGG 0.260305 7_3:-65481415 None:intergenic
GATTGTTAAGGAAGGTTCTA+AGG 0.262383 7_3:-65477257 None:intergenic
CAATCACTTTGCATGAAATT+AGG 0.268387 7_3:-65481367 None:intergenic
CGCTCATACCCCTAAAATAA+AGG 0.275389 7_3:+65476877 Msa1117190:five_prime_UTR
TACAAAGCACACAGGCTTCT+TGG 0.292555 7_3:+65478729 Msa1117190:five_prime_UTR
CATGCATCTATTTACTATAT+CGG 0.301572 7_3:+65480635 Msa1117190:CDS
AAGTGAGAGGGTTATGAAAA+AGG 0.309629 7_3:-65476973 None:intergenic
AGCTCTGTCTATGAGGTTAA+TGG 0.310475 7_3:+65478697 Msa1117190:five_prime_UTR
GACTTTGAGGGTTGATCATA+TGG 0.322630 7_3:+65478855 Msa1117190:five_prime_UTR
ATAGAGGCTGGGCCCTTGTC+TGG 0.326336 7_3:-65480659 None:intergenic
GGGGTTGTTACTTCCAAATA+GGG 0.341619 7_3:+65479310 Msa1117190:intron
AAGAATATCGTTCCACGAAT+CGG 0.343996 7_3:-65480723 None:intergenic
AGTAAAGAAATTAACATGTT+TGG 0.349869 7_3:+65480985 Msa1117190:three_prime_UTR
TCGGAAACACTACCTGATTT+AGG 0.352974 7_3:+65480479 Msa1117190:CDS
CTTGGCAAGTTGCAATCTTT+GGG 0.354982 7_3:-65477592 None:intergenic
TCTTGGCGCTGCATAGAGGC+TGG 0.370982 7_3:-65480671 None:intergenic
GAACCTTCCTTAACAATCCT+TGG 0.374845 7_3:+65477262 Msa1117190:five_prime_UTR
GTAAAATCTCAGGTGACATT+TGG 0.376048 7_3:+65481522 Msa1117190:three_prime_UTR
CTTCTTCTATGTTGATTACA+AGG 0.376346 7_3:+65477318 Msa1117190:five_prime_UTR
GGGAGAGCAGATAAGCTTAT+AGG 0.376870 7_3:+65481448 Msa1117190:three_prime_UTR
AAATTTAGACAAACCTGAAA+TGG 0.377734 7_3:-65479468 None:intergenic
AGGGGTGGTGACTGGAATAC+TGG 0.380022 7_3:+65480443 Msa1117190:intron
GACTTGAGACAGTAGTTGAT+TGG 0.383155 7_3:+65479386 Msa1117190:CDS
GATGTGTTGGTTCTCAATGC+TGG 0.385997 7_3:+65478907 Msa1117190:five_prime_UTR
CGCCAACCCTTCTCAATCAT+TGG 0.394311 7_3:+65480864 Msa1117190:three_prime_UTR
TATACATCAAGTTTGTATCT+AGG 0.398288 7_3:-65481484 None:intergenic
TTTAAGGGTGTGGGATTTGT+TGG 0.399497 7_3:-65476910 None:intergenic
GCTCTGTCTATGAGGTTAAT+GGG 0.404836 7_3:+65478698 Msa1117190:five_prime_UTR
CCGGGTAAAATTGACTTTGA+GGG 0.407159 7_3:+65478843 Msa1117190:five_prime_UTR
AGAATATCGTTCCACGAATC+GGG 0.409551 7_3:-65480722 None:intergenic
TCCTCATGGGGCACCTTACC+GGG 0.416311 7_3:+65478825 Msa1117190:five_prime_UTR
TGAATAGGAGGAGGAGGAGA+AGG 0.416571 7_3:-65477403 None:intergenic
AATTGTTCCTTCTTGGATCA+AGG 0.417914 7_3:+65477511 Msa1117190:five_prime_UTR
AAATAGTCTTATACAGTTTG+CGG 0.417938 7_3:+65480816 Msa1117190:exon
TTCTCAATGCTGGGCATTGG+TGG 0.427971 7_3:+65478917 Msa1117190:five_prime_UTR
GCAGGCACAGAGCCTAAATC+AGG 0.428532 7_3:-65480491 None:intergenic
TCCCTGGTGTTCCCGATTCG+TGG 0.429355 7_3:+65480711 Msa1117190:CDS
AATTTGGGATGGTGAATTTG+AGG 0.431631 7_3:+65481427 Msa1117190:three_prime_UTR
GGATTGCCCGTGAAGTAAAC+AGG 0.441300 7_3:+65479407 Msa1117190:CDS
AGCCTGTGTGCTTTGTAATT+GGG 0.443643 7_3:-65478723 None:intergenic
ACTCTTCTCTTTGTTTGTTG+TGG 0.444679 7_3:+65477092 Msa1117190:five_prime_UTR
ATGCATCTATTTACTATATC+GGG 0.447777 7_3:+65480636 Msa1117190:CDS
TACTGGTGGTGGTTGTCATT+CGG 0.449065 7_3:+65480460 Msa1117190:CDS
AGAAGGTGAAAGGGTTAAAG+TGG 0.454049 7_3:-65477118 None:intergenic
TGCAAGGACGGCCTCCTCAT+GGG 0.454477 7_3:+65478812 Msa1117190:five_prime_UTR
ATATGGACTGGACTTCTCAT+AGG 0.456261 7_3:+65478872 Msa1117190:five_prime_UTR
GAAGAATCCAAGGATTGTTA+AGG 0.456736 7_3:-65477269 None:intergenic
CACTTAGTGTAGAAAGCATC+AGG 0.460883 7_3:-65477559 None:intergenic
ATTTGGGATGGTGAATTTGA+GGG 0.461507 7_3:+65481428 Msa1117190:three_prime_UTR
AGCTAAATTGGCCATCTTTG+TGG 0.463111 7_3:+65480906 Msa1117190:three_prime_UTR
GCTCATACCCCTAAAATAAA+GGG 0.463577 7_3:+65476878 Msa1117190:five_prime_UTR
TCAAGTGGGTCATCTATTGC+GGG 0.464177 7_3:-65481614 None:intergenic
ACCGGGTAAAATTGACTTTG+AGG 0.476150 7_3:+65478842 Msa1117190:five_prime_UTR
TTTGTTCCTGTTTACTTCAC+GGG 0.476371 7_3:-65479413 None:intergenic
CCAAAGATTGCAACTTGCCA+AGG 0.481233 7_3:+65477593 Msa1117190:five_prime_UTR
GATGTATCAGGGGTGGTGAC+TGG 0.482783 7_3:+65480435 Msa1117190:intron
AGTAGAAGAAGAAGGTGAAA+GGG 0.486952 7_3:-65477127 None:intergenic
TGTAGCCATTGGTGTCTCCC+TGG 0.487058 7_3:+65480695 Msa1117190:CDS
GACACCAATGGCTACAGTCT+TGG 0.489775 7_3:-65480688 None:intergenic
TGGTTCTCAATGCTGGGCAT+TGG 0.493620 7_3:+65478914 Msa1117190:five_prime_UTR
CATCAATGAATGGTAGGAAA+AGG 0.494535 7_3:-65477067 None:intergenic
TAGTAGAAGAAGAAGGTGAA+AGG 0.499065 7_3:-65477128 None:intergenic
ATTTGATGCAAGGAAGATGT+TGG 0.500294 7_3:+65478573 Msa1117190:five_prime_UTR
CACCAATGATTGAGAAGGGT+TGG 0.501479 7_3:-65480866 None:intergenic
CAGGAGCATAAGTTCGGAAA+AGG 0.503608 7_3:-65479444 None:intergenic
TGCTCTTCTTCTCAAGAGGA+AGG 0.505400 7_3:+65480748 Msa1117190:CDS
GAACAAGTAGTAGAAGAAGA+AGG 0.506836 7_3:-65477135 None:intergenic
AATAGGACCGGAGGGAGTAT+TGG 0.509944 7_3:+65481289 Msa1117190:intron
ATTGTTAAGGAAGGTTCTAA+GGG 0.513871 7_3:-65477256 None:intergenic
ATCAATAATGTGAAGTGAGA+GGG 0.515779 7_3:-65476985 None:intergenic
TTCAAGTGGGTCATCTATTG+CGG 0.516846 7_3:-65481615 None:intergenic
CAATTTGAAGAATGATAAAG+TGG 0.517535 7_3:-65477493 None:intergenic
TTCCACGAATCGGGAACACC+AGG 0.517793 7_3:-65480713 None:intergenic
ATTGGTGAATGACATGAAGT+TGG 0.522707 7_3:+65480882 Msa1117190:three_prime_UTR
AAACAAGAGCTCTGTCTATG+AGG 0.526156 7_3:+65478690 Msa1117190:five_prime_UTR
TTACTATATCGGGCCAGACA+AGG 0.528172 7_3:+65480646 Msa1117190:CDS
TACTATATCGGGCCAGACAA+GGG 0.530919 7_3:+65480647 Msa1117190:CDS
ATGTGTTGGTTCTCAATGCT+GGG 0.532135 7_3:+65478908 Msa1117190:five_prime_UTR
CTGATGCTTTCTACACTAAG+TGG 0.533298 7_3:+65477560 Msa1117190:five_prime_UTR
GAAGGTGAAAGGGTTAAAGT+GGG 0.534843 7_3:-65477117 None:intergenic
ACAGTCTTGGCGCTGCATAG+AGG 0.536761 7_3:-65480675 None:intergenic
GAGAAAATCCATGTGGGTCA+TGG 0.537388 7_3:-65477212 None:intergenic
AGTTGAAGTTTGAATGAATG+AGG 0.537808 7_3:-65477024 None:intergenic
TATATGACAGATTTGATGCA+AGG 0.539120 7_3:+65478563 Msa1117190:intron
AGTGAATCTGACCACAAAGA+TGG 0.540687 7_3:-65480917 None:intergenic
TCATTCACCAATGATTGAGA+AGG 0.540719 7_3:-65480871 None:intergenic
ACTGCACTGTTGAATACTAC+AGG 0.545690 7_3:+65478773 Msa1117190:five_prime_UTR
CTTTCTACACTAAGTGGAGA+TGG 0.546644 7_3:+65477566 Msa1117190:five_prime_UTR
GAGTAGCATCAATGAATGGT+AGG 0.549105 7_3:-65477073 None:intergenic
AAATGAATGTCGGAGAGTGC+AGG 0.550404 7_3:-65480509 None:intergenic
TTGTTGGTGATTCGATTGGA+AGG 0.550931 7_3:+65478623 Msa1117190:five_prime_UTR
AGAAGAGTAGCATCAATGAA+TGG 0.551102 7_3:-65477077 None:intergenic
GCAAGGACGGCCTCCTCATG+GGG 0.555175 7_3:+65478813 Msa1117190:five_prime_UTR
TTCTTCTATGTTGATTACAA+GGG 0.555726 7_3:+65477319 Msa1117190:five_prime_UTR
TTGAAACGAAGAAGAATCCA+AGG 0.555917 7_3:-65477279 None:intergenic
AATGGACAGGAGCATAAGTT+CGG 0.556094 7_3:-65479450 None:intergenic
TAGACAAACCTGAAATGGAC+AGG 0.558652 7_3:-65479463 None:intergenic
TTTATGCTCTTCTTCTCAAG+AGG 0.558774 7_3:+65480744 Msa1117190:CDS
ATTCGATTGGAAGGAACCAA+TGG 0.563465 7_3:+65478632 Msa1117190:five_prime_UTR
TTTCTTTACTTTGTAAAACA+AGG 0.564594 7_3:-65480972 None:intergenic
TTCGATTGGAAGGAACCAAT+GGG 0.567005 7_3:+65478633 Msa1117190:five_prime_UTR
TACAGAGAAGTGATTCCCAT+TGG 0.569163 7_3:-65478648 None:intergenic
TTGGTGAATGACATGAAGTT+GGG 0.571321 7_3:+65480883 Msa1117190:three_prime_UTR
GGTGACTGGAATACTGGTGG+TGG 0.575571 7_3:+65480449 Msa1117190:CDS
CATTCACCAATGATTGAGAA+GGG 0.579613 7_3:-65480870 None:intergenic
AAGGTAAAGTAGTGTTTGTG+AGG 0.583160 7_3:-65477048 None:intergenic
ACGAAAACCTTGATCCAAGA+AGG 0.586020 7_3:-65477518 None:intergenic
CGGTAAGGTGCCCCATGAGG+AGG 0.592296 7_3:-65478823 None:intergenic
GCTTAATGTCACACAAATGT+CGG 0.593319 7_3:+65480595 Msa1117190:CDS
TGAGGGTTGATCATATGGAC+TGG 0.593986 7_3:+65478860 Msa1117190:five_prime_UTR
AATCAATAATGTGAAGTGAG+AGG 0.598843 7_3:-65476986 None:intergenic
TTTGGTCTTGAAAATAGCAG+TGG 0.599066 7_3:+65481540 Msa1117190:three_prime_UTR
AGCGCCAAGACTGTAGCCAT+TGG 0.608820 7_3:+65480684 Msa1117190:CDS
AATCCAAGGATTGTTAAGGA+AGG 0.610850 7_3:-65477265 None:intergenic
GTGGAGAGATGCAGATGTGT+TGG 0.620711 7_3:+65478894 Msa1117190:five_prime_UTR
TGGACTGGACTTCTCATAGG+TGG 0.622128 7_3:+65478875 Msa1117190:five_prime_UTR
GAACACCAGGGAGACACCAA+TGG 0.632544 7_3:-65480700 None:intergenic
GGGTTGTTACTTCCAAATAG+GGG 0.643813 7_3:+65479311 Msa1117190:five_prime_UTR
AAGGGTATACTTCACTCTAG+AGG 0.647818 7_3:+65477337 Msa1117190:five_prime_UTR
ATGGCAGACCACTACAAAGA+GGG 0.649726 7_3:-65481396 None:intergenic
ATTTCTTGAGAAAATCCATG+TGG 0.650258 7_3:-65477219 None:intergenic
AATGGCAGACCACTACAAAG+AGG 0.652412 7_3:-65481397 None:intergenic
GGTGGTGACTGGAATACTGG+TGG 0.654167 7_3:+65480446 Msa1117190:CDS
ACCCGGTAAGGTGCCCCATG+AGG 0.655850 7_3:-65478826 None:intergenic
TTGTTACTTCCAAATAGGGG+AGG 0.656484 7_3:+65479314 Msa1117190:five_prime_UTR
TTTCTTGAGAAAATCCATGT+GGG 0.659658 7_3:-65477218 None:intergenic
GTGGGTCATCTATTGCGGGA+CGG 0.663375 7_3:-65481610 None:intergenic
TCACACAAATGTCGGCACGC+AGG 0.675220 7_3:+65480603 Msa1117190:CDS
TTGTTAAGGAAGGTTCTAAG+GGG 0.676553 7_3:-65477255 None:intergenic
GACAGTACTGAAATGAATGT+CGG 0.678806 7_3:-65480519 None:intergenic
AACCCAATTACAAAGCACAC+AGG 0.699405 7_3:+65478721 Msa1117190:five_prime_UTR
TCCACGAATCGGGAACACCA+GGG 0.710801 7_3:-65480712 None:intergenic
AAGGTGAAAGGGTTAAAGTG+GGG 0.731618 7_3:-65477116 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAGTGTTTTTTTTTTTT+TGG + chr7_3:65477867-65477886 Msa1117190:intron 10.0%
!!! AAAGGATTTTTTTTTTATTT+GGG + chr7_3:65478095-65478114 Msa1117190:intron 10.0%
!!! TTTGAACAAAAATTATTTTT+TGG + chr7_3:65478510-65478529 Msa1117190:intron 10.0%
!! AAAATCAAATAAAGATAAAA+GGG - chr7_3:65479511-65479530 None:intergenic 10.0%
!! AAAAATCAAATAAAGATAAA+AGG - chr7_3:65479512-65479531 None:intergenic 10.0%
!!! AGTTTTAGATTTTGTTTTAA+GGG - chr7_3:65476928-65476947 None:intergenic 15.0%
!!! TTTTTGTAGTTATTTTATTC+TGG + chr7_3:65477646-65477665 Msa1117190:intron 15.0%
!!! AAACCTTTTTTTTTGTTTAT+TGG + chr7_3:65477702-65477721 Msa1117190:intron 15.0%
!! TAACCAATAAACAAAAAAAA+AGG - chr7_3:65477708-65477727 None:intergenic 15.0%
!! GCAAAAATATATAAAATACA+AGG - chr7_3:65477794-65477813 None:intergenic 15.0%
!! ATTGTTGAATTTATATATGA+AGG + chr7_3:65477890-65477909 Msa1117190:intron 15.0%
!! ATAGTTAATCATAATGAAAT+TGG - chr7_3:65478007-65478026 None:intergenic 15.0%
!! TTATGATTAACTATTAACAT+TGG + chr7_3:65478013-65478032 Msa1117190:intron 15.0%
!!! GAAAGGATTTTTTTTTTATT+TGG + chr7_3:65478094-65478113 Msa1117190:intron 15.0%
!!! AAGGATTTTTTTTTTATTTG+GGG + chr7_3:65478096-65478115 Msa1117190:intron 15.0%
!! AATTATTAAAGGTAAAAAAG+AGG - chr7_3:65478169-65478188 None:intergenic 15.0%
!!! GATTTTATTTTATGTTTGTT+CGG + chr7_3:65478968-65478987 Msa1117190:intron 15.0%
!! TAAATACTTAAACACATATA+GGG - chr7_3:65479233-65479252 None:intergenic 15.0%
!! TTAAATACTTAAACACATAT+AGG - chr7_3:65479234-65479253 None:intergenic 15.0%
!! ACTGATAATAATTTGAAAAA+TGG + chr7_3:65479629-65479648 Msa1117190:intron 15.0%
!! ATAATAATTTGAAAAATGGA+AGG + chr7_3:65479633-65479652 Msa1117190:intron 15.0%
!! ATCTTCAAAAATAAGAAATA+AGG - chr7_3:65481063-65481082 None:intergenic 15.0%
!!! CAAAACTTTTTCTTATAAAT+AGG - chr7_3:65481193-65481212 None:intergenic 15.0%
!!! ATGTATACAACATATTTTTT+TGG + chr7_3:65481500-65481519 Msa1117190:three_prime_UTR 15.0%
!!! ATTTTTCTCCCTTTATTTTA+GGG - chr7_3:65476889-65476908 None:intergenic 20.0%
!!! TATTTTTCTCCCTTTATTTT+AGG - chr7_3:65476890-65476909 None:intergenic 20.0%
!!! GAGTTTTAGATTTTGTTTTA+AGG - chr7_3:65476929-65476948 None:intergenic 20.0%
!! AAAATGGAATGAAAAAAGTT+TGG - chr7_3:65477365-65477384 None:intergenic 20.0%
!!! TTTTGAGTCAAAAATTGAAT+AGG - chr7_3:65477421-65477440 None:intergenic 20.0%
!!! ATTCAATTTTTGACTCAAAA+AGG + chr7_3:65477421-65477440 Msa1117190:five_prime_UTR 20.0%
!! AAAACAAAATCAAAGCAAAA+GGG - chr7_3:65477630-65477649 None:intergenic 20.0%
!! AAAAACAAAATCAAAGCAAA+AGG - chr7_3:65477631-65477650 None:intergenic 20.0%
!!! TGTTAAGATTTTTCCTTTAT+TGG + chr7_3:65477936-65477955 Msa1117190:intron 20.0%
!!! TCTATTTTTCTTTCTCTATA+AGG + chr7_3:65478069-65478088 Msa1117190:intron 20.0%
!! TGCAAGTATGAAATTATTAA+AGG - chr7_3:65478180-65478199 None:intergenic 20.0%
!!! ATAAAATCCTTACATTTTGA+CGG - chr7_3:65478956-65478975 None:intergenic 20.0%
!! AAGTTGTCATTAAAAACATT+TGG + chr7_3:65480066-65480085 Msa1117190:intron 20.0%
!! AGTTGTCATTAAAAACATTT+GGG + chr7_3:65480067-65480086 Msa1117190:intron 20.0%
!!! TATAAAGCACAACTTAATTT+TGG - chr7_3:65480201-65480220 None:intergenic 20.0%
!! ATACATCAACAACAAATTAA+TGG - chr7_3:65480422-65480441 None:intergenic 20.0%
!! TTTCTTTACTTTGTAAAACA+AGG - chr7_3:65480975-65480994 None:intergenic 20.0%
!! AGTAAAGAAATTAACATGTT+TGG + chr7_3:65480985-65481004 Msa1117190:three_prime_UTR 20.0%
!!! CACTTTATTTCAAATTTTCA+AGG - chr7_3:65481133-65481152 None:intergenic 20.0%
!! CCTATTTATAAAAGAAAGTT+GGG - chr7_3:65481275-65481294 None:intergenic 20.0%
!! TCCTATTTATAAAAGAAAGT+TGG - chr7_3:65481276-65481295 None:intergenic 20.0%
!!! TATTTTTTTGGTAAAATCTC+AGG + chr7_3:65481512-65481531 Msa1117190:three_prime_UTR 20.0%
!!! TTTTTCTCCCTTTATTTTAG+GGG - chr7_3:65476888-65476907 None:intergenic 25.0%
! GTTATGAAAAAGGAAGTTAT+TGG - chr7_3:65476966-65476985 None:intergenic 25.0%
!! TTCTTCTATGTTGATTACAA+GGG + chr7_3:65477319-65477338 Msa1117190:five_prime_UTR 25.0%
! AAGAAGAAGAAGAAGAAAAA+TGG - chr7_3:65477381-65477400 None:intergenic 25.0%
! CAATTTGAAGAATGATAAAG+TGG - chr7_3:65477496-65477515 None:intergenic 25.0%
! AAACAAAATCAAAGCAAAAG+GGG - chr7_3:65477629-65477648 None:intergenic 25.0%
!!! TGTAGTTATTTTATTCTGGT+TGG + chr7_3:65477650-65477669 Msa1117190:intron 25.0%
! TATTAAAGGTAAAAAAGAGG+AGG - chr7_3:65478166-65478185 None:intergenic 25.0%
!!! TAGTGATTTGTTGAAAACAA+TGG - chr7_3:65478410-65478429 None:intergenic 25.0%
! TTGTGAAATAGCATACATAA+CGG + chr7_3:65478462-65478481 Msa1117190:intron 25.0%
! TTGGAATGTGATATATAACT+TGG + chr7_3:65478529-65478548 Msa1117190:intron 25.0%
!!! AACAAACGATTAGTTTTTGT+TGG + chr7_3:65478607-65478626 Msa1117190:five_prime_UTR 25.0%
! AAGACATTAATCATGTGATT+AGG + chr7_3:65479044-65479063 Msa1117190:intron 25.0%
! AGACATTAATCATGTGATTA+GGG + chr7_3:65479045-65479064 Msa1117190:intron 25.0%
! TTTAAACAGAGCATAAAGAT+GGG - chr7_3:65479162-65479181 None:intergenic 25.0%
! ATTTAAACAGAGCATAAAGA+TGG - chr7_3:65479163-65479182 None:intergenic 25.0%
! ATTATATGTGAGTTTGATGT+TGG + chr7_3:65479270-65479289 Msa1117190:intron 25.0%
!!! TTGGTCTTATTTTATTGCTT+AGG + chr7_3:65479289-65479308 Msa1117190:intron 25.0%
!!! TGGTCTTATTTTATTGCTTA+GGG + chr7_3:65479290-65479309 Msa1117190:intron 25.0%
! AAATTTAGACAAACCTGAAA+TGG - chr7_3:65479471-65479490 None:intergenic 25.0%
! TCAAATAAAGATAAAAGGGA+AGG - chr7_3:65479507-65479526 None:intergenic 25.0%
! TTCATAGCTAATGTATTTAC+TGG - chr7_3:65479569-65479588 None:intergenic 25.0%
! TCAGTGCTATAAAGAATATT+AGG + chr7_3:65479733-65479752 Msa1117190:intron 25.0%
! GCTATAAAGAATATTAGGAT+TGG + chr7_3:65479738-65479757 Msa1117190:intron 25.0%
!! AGAATATTAGGATTGGTAAA+AGG + chr7_3:65479745-65479764 Msa1117190:intron 25.0%
! GTTGTCATTAAAAACATTTG+GGG + chr7_3:65480068-65480087 Msa1117190:intron 25.0%
! AGTTCAAAATATAACCGTTT+AGG + chr7_3:65480153-65480172 Msa1117190:intron 25.0%
! TTGTGCTTTATAATAACCAA+CGG + chr7_3:65480209-65480228 Msa1117190:intron 25.0%
!! CTTGGTAATACTAATGTTAA+TGG + chr7_3:65480278-65480297 Msa1117190:intron 25.0%
! TCAACAACAAATTAATGGTA+AGG - chr7_3:65480417-65480436 None:intergenic 25.0%
!!! TAATTTGTTGTTGATGTATC+AGG + chr7_3:65480423-65480442 Msa1117190:intron 25.0%
!!! AATTTGTTGTTGATGTATCA+GGG + chr7_3:65480424-65480443 Msa1117190:intron 25.0%
! CATGCATCTATTTACTATAT+CGG + chr7_3:65480635-65480654 Msa1117190:CDS 25.0%
! ATGCATCTATTTACTATATC+GGG + chr7_3:65480636-65480655 Msa1117190:CDS 25.0%
!!! AAATAGTCTTATACAGTTTG+CGG + chr7_3:65480816-65480835 Msa1117190:exon 25.0%
!! CTTTTTCTTATAAATAGGAC+CGG - chr7_3:65481188-65481207 None:intergenic 25.0%
!! CCCAACTTTCTTTTATAAAT+AGG + chr7_3:65481272-65481291 Msa1117190:intron 25.0%
!! CTTTCTTTTATAAATAGGAC+CGG + chr7_3:65481277-65481296 Msa1117190:intron 25.0%
!!! TCTGCCATTTTAGATTAATT+TGG + chr7_3:65481411-65481430 Msa1117190:three_prime_UTR 25.0%
!!! CTGCCATTTTAGATTAATTT+GGG + chr7_3:65481412-65481431 Msa1117190:three_prime_UTR 25.0%
! CATCCCAAATTAATCTAAAA+TGG - chr7_3:65481418-65481437 None:intergenic 25.0%
!!! CATTTTAGATTAATTTGGGA+TGG + chr7_3:65481416-65481435 Msa1117190:three_prime_UTR 25.0%
! TATACATCAAGTTTGTATCT+AGG - chr7_3:65481487-65481506 None:intergenic 25.0%
!!! AGATTTTGTTTTAAGGGTGT+GGG - chr7_3:65476922-65476941 None:intergenic 30.0%
!!! TAGATTTTGTTTTAAGGGTG+TGG - chr7_3:65476923-65476942 None:intergenic 30.0%
ATCAATAATGTGAAGTGAGA+GGG - chr7_3:65476988-65477007 None:intergenic 30.0%
AATCAATAATGTGAAGTGAG+AGG - chr7_3:65476989-65477008 None:intergenic 30.0%
AGTTGAAGTTTGAATGAATG+AGG - chr7_3:65477027-65477046 None:intergenic 30.0%
TTTCTTGAGAAAATCCATGT+GGG - chr7_3:65477221-65477240 None:intergenic 30.0%
ATTTCTTGAGAAAATCCATG+TGG - chr7_3:65477222-65477241 None:intergenic 30.0%
! ATTGTTAAGGAAGGTTCTAA+GGG - chr7_3:65477259-65477278 None:intergenic 30.0%
! CTTCTTCTATGTTGATTACA+AGG + chr7_3:65477318-65477337 Msa1117190:five_prime_UTR 30.0%
TGAGTCAAAAATTGAATAGG+AGG - chr7_3:65477418-65477437 None:intergenic 30.0%
!! GATAACTGTGATGTTTTTGA+TGG + chr7_3:65477445-65477464 Msa1117190:five_prime_UTR 30.0%
!! TGATGTTTTTGATGGAAACT+GGG + chr7_3:65477453-65477472 Msa1117190:five_prime_UTR 30.0%
TTCTTCAAATTGTTCCTTCT+TGG + chr7_3:65477504-65477523 Msa1117190:five_prime_UTR 30.0%
TTCCTAGTACCAATTGATAA+GGG - chr7_3:65477841-65477860 None:intergenic 30.0%
!!! ATATGAAGGTGTTTTTGTGT+TGG + chr7_3:65477904-65477923 Msa1117190:intron 30.0%
TCTTTCTCTATAAGGAAGAA+AGG + chr7_3:65478077-65478096 Msa1117190:intron 30.0%
TATATGACAGATTTGATGCA+AGG + chr7_3:65478563-65478582 Msa1117190:intron 30.0%
CGACAATTCAATCTTTAACA+AGG + chr7_3:65479010-65479029 Msa1117190:intron 30.0%
GACATTAATCATGTGATTAG+GGG + chr7_3:65479046-65479065 Msa1117190:intron 30.0%
TTATGCTCTGTTTAAATCCT+TGG + chr7_3:65479166-65479185 Msa1117190:intron 30.0%
TATGCTCTGTTTAAATCCTT+GGG + chr7_3:65479167-65479186 Msa1117190:intron 30.0%
!!! GGTCTTATTTTATTGCTTAG+GGG + chr7_3:65479291-65479310 Msa1117190:intron 30.0%
! TTTTGTTCCTGTTTACTTCA+CGG - chr7_3:65479417-65479436 None:intergenic 30.0%
TTGAATGTAATCACACATGT+TGG + chr7_3:65479659-65479678 Msa1117190:intron 30.0%
! TTTCAAATTGAAGGCATGTT+CGG - chr7_3:65479711-65479730 None:intergenic 30.0%
!!! TACTGCATAGCTTTTTTTAG+AGG + chr7_3:65479799-65479818 Msa1117190:intron 30.0%
!! TACTTTGAAATAGCTTATGC+AGG + chr7_3:65479993-65480012 Msa1117190:intron 30.0%
TGTTATCAATGTAGAGAATC+TGG + chr7_3:65480022-65480041 Msa1117190:intron 30.0%
ATTCTACTCGTTATCCTAAA+CGG - chr7_3:65480170-65480189 None:intergenic 30.0%
!! ATTTGTTGTTGATGTATCAG+GGG + chr7_3:65480425-65480444 Msa1117190:intron 30.0%
!! CAAATCACATGTTTTGAATG+TGG + chr7_3:65480568-65480587 Msa1117190:CDS 30.0%
!! GAGAAACTTTTGTTGTATTG+CGG - chr7_3:65480784-65480803 None:intergenic 30.0%
TCAACAAAAGTTGACGTATT+TGG - chr7_3:65481252-65481271 None:intergenic 30.0%
CAATCACTTTGCATGAAATT+AGG - chr7_3:65481370-65481389 None:intergenic 30.0%
!!! CTTTATTTTAGGGGTATGAG+CGG - chr7_3:65476879-65476898 None:intergenic 35.0%
GCTCATACCCCTAAAATAAA+GGG + chr7_3:65476878-65476897 Msa1117190:five_prime_UTR 35.0%
AAGTGAGAGGGTTATGAAAA+AGG - chr7_3:65476976-65476995 None:intergenic 35.0%
AAGGTAAAGTAGTGTTTGTG+AGG - chr7_3:65477051-65477070 None:intergenic 35.0%
CATCAATGAATGGTAGGAAA+AGG - chr7_3:65477070-65477089 None:intergenic 35.0%
AGAAGAGTAGCATCAATGAA+TGG - chr7_3:65477080-65477099 None:intergenic 35.0%
! ACTCTTCTCTTTGTTTGTTG+TGG + chr7_3:65477092-65477111 Msa1117190:five_prime_UTR 35.0%
AGTAGAAGAAGAAGGTGAAA+GGG - chr7_3:65477130-65477149 None:intergenic 35.0%
TAGTAGAAGAAGAAGGTGAA+AGG - chr7_3:65477131-65477150 None:intergenic 35.0%
GAACAAGTAGTAGAAGAAGA+AGG - chr7_3:65477138-65477157 None:intergenic 35.0%
!! TTGTTAAGGAAGGTTCTAAG+GGG - chr7_3:65477258-65477277 None:intergenic 35.0%
GATTGTTAAGGAAGGTTCTA+AGG - chr7_3:65477260-65477279 None:intergenic 35.0%
AATCCAAGGATTGTTAAGGA+AGG - chr7_3:65477268-65477287 None:intergenic 35.0%
GAAGAATCCAAGGATTGTTA+AGG - chr7_3:65477272-65477291 None:intergenic 35.0%
TTGAAACGAAGAAGAATCCA+AGG - chr7_3:65477282-65477301 None:intergenic 35.0%
AAAAATTGAATAGGAGGAGG+AGG - chr7_3:65477412-65477431 None:intergenic 35.0%
GTCAAAAATTGAATAGGAGG+AGG - chr7_3:65477415-65477434 None:intergenic 35.0%
!! GTGATGTTTTTGATGGAAAC+TGG + chr7_3:65477452-65477471 Msa1117190:five_prime_UTR 35.0%
! TTTTTGATGGAAACTGGGTT+TGG + chr7_3:65477458-65477477 Msa1117190:five_prime_UTR 35.0%
! TTTTGATGGAAACTGGGTTT+GGG + chr7_3:65477459-65477478 Msa1117190:five_prime_UTR 35.0%
AATTGTTCCTTCTTGGATCA+AGG + chr7_3:65477511-65477530 Msa1117190:five_prime_UTR 35.0%
TACCCTTATCAATTGGTACT+AGG + chr7_3:65477836-65477855 Msa1117190:intron 35.0%
CTTCCTAGTACCAATTGATA+AGG - chr7_3:65477842-65477861 None:intergenic 35.0%
!! GTGTTTTTGTGTTGGTATGA+AGG + chr7_3:65477912-65477931 Msa1117190:intron 35.0%
CACTAGCACAAAACCAATAA+AGG - chr7_3:65477952-65477971 None:intergenic 35.0%
TGAAATTGGAAACACTGACA+AGG - chr7_3:65477993-65478012 None:intergenic 35.0%
TAAACTGTCACATTGAGAAC+AGG - chr7_3:65478141-65478160 None:intergenic 35.0%
! AAACAATGGCCTTAACCATT+CGG - chr7_3:65478396-65478415 None:intergenic 35.0%
TGTTATAGTAGTGTGCATAG+CGG + chr7_3:65478485-65478504 Msa1117190:intron 35.0%
ATTTGATGCAAGGAAGATGT+TGG + chr7_3:65478573-65478592 Msa1117190:five_prime_UTR 35.0%
!!! GTTTTTGTTGGTGATTCGAT+TGG + chr7_3:65478619-65478638 Msa1117190:five_prime_UTR 35.0%
! AAAGTCAATTTTACCCGGTA+AGG - chr7_3:65478841-65478860 None:intergenic 35.0%
!! TTTATGTTTGTTCGGTGTGA+TGG + chr7_3:65478976-65478995 Msa1117190:intron 35.0%
ATTAATCATGTGATTAGGGG+TGG + chr7_3:65479049-65479068 Msa1117190:intron 35.0%
TTAATCATGTGATTAGGGGT+GGG + chr7_3:65479050-65479069 Msa1117190:intron 35.0%
! AATGTTTTCAAAGCAGGTCA+GGG - chr7_3:65479107-65479126 None:intergenic 35.0%
! TAATGTTTTCAAAGCAGGTC+AGG - chr7_3:65479108-65479127 None:intergenic 35.0%
!! TGACCTGCTTTGAAAACATT+AGG + chr7_3:65479107-65479126 Msa1117190:intron 35.0%
TTTGTTCCTGTTTACTTCAC+GGG - chr7_3:65479416-65479435 None:intergenic 35.0%
TGTATTTACTGGAGAAGAAG+TGG - chr7_3:65479558-65479577 None:intergenic 35.0%
ATTGACACAAACAATGACAC+CGG + chr7_3:65479591-65479610 Msa1117190:intron 35.0%
! GCACTGACATTTCAAATTGA+AGG - chr7_3:65479720-65479739 None:intergenic 35.0%
! TAGGATTGGTAAAAGGACAT+TGG + chr7_3:65479752-65479771 Msa1117190:intron 35.0%
ATCACAGAACTTTCCACTTA+AGG + chr7_3:65479911-65479930 Msa1117190:intron 35.0%
TCACAGAACTTTCCACTTAA+GGG + chr7_3:65479912-65479931 Msa1117190:intron 35.0%
CTAAAAGGAATTCCCTTAAG+TGG - chr7_3:65479927-65479946 None:intergenic 35.0%
TATCAATGTAGAGAATCTGG+AGG + chr7_3:65480025-65480044 Msa1117190:intron 35.0%
! CATTAAAAACATTTGGGGCT+CGG + chr7_3:65480073-65480092 Msa1117190:intron 35.0%
! ATTAAAAACATTTGGGGCTC+GGG + chr7_3:65480074-65480093 Msa1117190:intron 35.0%
TGCTTTATAATAACCAACGG+TGG + chr7_3:65480212-65480231 Msa1117190:intron 35.0%
TCTTGCTCAGTATATTGATC+TGG + chr7_3:65480384-65480403 Msa1117190:intron 35.0%
! GACAGTACTGAAATGAATGT+CGG - chr7_3:65480522-65480541 None:intergenic 35.0%
GCTTAATGTCACACAAATGT+CGG + chr7_3:65480595-65480614 Msa1117190:CDS 35.0%
AAGAATATCGTTCCACGAAT+CGG - chr7_3:65480726-65480745 None:intergenic 35.0%
TTTATGCTCTTCTTCTCAAG+AGG + chr7_3:65480744-65480763 Msa1117190:CDS 35.0%
CATTCACCAATGATTGAGAA+GGG - chr7_3:65480873-65480892 None:intergenic 35.0%
TCATTCACCAATGATTGAGA+AGG - chr7_3:65480874-65480893 None:intergenic 35.0%
ATTGGTGAATGACATGAAGT+TGG + chr7_3:65480882-65480901 Msa1117190:three_prime_UTR 35.0%
TTGGTGAATGACATGAAGTT+GGG + chr7_3:65480883-65480902 Msa1117190:three_prime_UTR 35.0%
TTGTGGTCAGATTCACTAAT+TGG + chr7_3:65480923-65480942 Msa1117190:three_prime_UTR 35.0%
GTGTTAATAATTACTCCCTC+CGG + chr7_3:65481166-65481185 Msa1117190:intron 35.0%
TTCTTATAAATAGGACCGGA+GGG - chr7_3:65481184-65481203 None:intergenic 35.0%
TTTCTTATAAATAGGACCGG+AGG - chr7_3:65481185-65481204 None:intergenic 35.0%
AAAAGTTGACGTATTTGGAC+TGG - chr7_3:65481247-65481266 None:intergenic 35.0%
! TCTTTTATAAATAGGACCGG+AGG + chr7_3:65481280-65481299 Msa1117190:intron 35.0%
! CTTTTATAAATAGGACCGGA+GGG + chr7_3:65481281-65481300 Msa1117190:intron 35.0%
!! ATTTTAACCAATACTCCCTC+CGG - chr7_3:65481299-65481318 None:intergenic 35.0%
! AATTTGGGATGGTGAATTTG+AGG + chr7_3:65481427-65481446 Msa1117190:three_prime_UTR 35.0%
! ATTTGGGATGGTGAATTTGA+GGG + chr7_3:65481428-65481447 Msa1117190:three_prime_UTR 35.0%
GTAAAATCTCAGGTGACATT+TGG + chr7_3:65481522-65481541 Msa1117190:three_prime_UTR 35.0%
!! TTTGGTCTTGAAAATAGCAG+TGG + chr7_3:65481540-65481559 Msa1117190:three_prime_UTR 35.0%
CGCTCATACCCCTAAAATAA+AGG + chr7_3:65476877-65476896 Msa1117190:five_prime_UTR 40.0%
! TTTAAGGGTGTGGGATTTGT+TGG - chr7_3:65476913-65476932 None:intergenic 40.0%
GAGTAGCATCAATGAATGGT+AGG - chr7_3:65477076-65477095 None:intergenic 40.0%
AAGGTGAAAGGGTTAAAGTG+GGG - chr7_3:65477119-65477138 None:intergenic 40.0%
GAAGGTGAAAGGGTTAAAGT+GGG - chr7_3:65477120-65477139 None:intergenic 40.0%
AGAAGGTGAAAGGGTTAAAG+TGG - chr7_3:65477121-65477140 None:intergenic 40.0%
AAAAACTACCATGACCCACA+TGG + chr7_3:65477204-65477223 Msa1117190:five_prime_UTR 40.0%
GAACCTTCCTTAACAATCCT+TGG + chr7_3:65477262-65477281 Msa1117190:five_prime_UTR 40.0%
! AAGGGTATACTTCACTCTAG+AGG + chr7_3:65477337-65477356 Msa1117190:five_prime_UTR 40.0%
ACGAAAACCTTGATCCAAGA+AGG - chr7_3:65477521-65477540 None:intergenic 40.0%
!! CACTTAGTGTAGAAAGCATC+AGG - chr7_3:65477562-65477581 None:intergenic 40.0%
CTGATGCTTTCTACACTAAG+TGG + chr7_3:65477560-65477579 Msa1117190:five_prime_UTR 40.0%
CTTTCTACACTAAGTGGAGA+TGG + chr7_3:65477566-65477585 Msa1117190:five_prime_UTR 40.0%
CTTGGCAAGTTGCAATCTTT+GGG - chr7_3:65477595-65477614 None:intergenic 40.0%
GATGAGCTACCCTTATCAAT+TGG + chr7_3:65477829-65477848 Msa1117190:intron 40.0%
TTCCAGCTAGGATTCAAACT+CGG - chr7_3:65478306-65478325 None:intergenic 40.0%
! GGTCAATGATTTTTCCAGCT+AGG - chr7_3:65478318-65478337 None:intergenic 40.0%
!! TTGTTGGTGATTCGATTGGA+AGG + chr7_3:65478623-65478642 Msa1117190:five_prime_UTR 40.0%
ATTCGATTGGAAGGAACCAA+TGG + chr7_3:65478632-65478651 Msa1117190:five_prime_UTR 40.0%
TTCGATTGGAAGGAACCAAT+GGG + chr7_3:65478633-65478652 Msa1117190:five_prime_UTR 40.0%
TACAGAGAAGTGATTCCCAT+TGG - chr7_3:65478651-65478670 None:intergenic 40.0%
AAACAAGAGCTCTGTCTATG+AGG + chr7_3:65478690-65478709 Msa1117190:five_prime_UTR 40.0%
AGCTCTGTCTATGAGGTTAA+TGG + chr7_3:65478697-65478716 Msa1117190:five_prime_UTR 40.0%
GCTCTGTCTATGAGGTTAAT+GGG + chr7_3:65478698-65478717 Msa1117190:five_prime_UTR 40.0%
AACCCAATTACAAAGCACAC+AGG + chr7_3:65478721-65478740 Msa1117190:five_prime_UTR 40.0%
AGCCTGTGTGCTTTGTAATT+GGG - chr7_3:65478726-65478745 None:intergenic 40.0%
AAGCCTGTGTGCTTTGTAAT+TGG - chr7_3:65478727-65478746 None:intergenic 40.0%
ACTGCACTGTTGAATACTAC+AGG + chr7_3:65478773-65478792 Msa1117190:five_prime_UTR 40.0%
!!! TCTCCGTTTTTAGTAGTGCA+AGG + chr7_3:65478796-65478815 Msa1117190:five_prime_UTR 40.0%
CGTCCTTGCACTACTAAAAA+CGG - chr7_3:65478802-65478821 None:intergenic 40.0%
!!! CGTTTTTAGTAGTGCAAGGA+CGG + chr7_3:65478800-65478819 Msa1117190:five_prime_UTR 40.0%
! ACCGGGTAAAATTGACTTTG+AGG + chr7_3:65478842-65478861 Msa1117190:five_prime_UTR 40.0%
! CCCTCAAAGTCAATTTTACC+CGG - chr7_3:65478846-65478865 None:intergenic 40.0%
! CCGGGTAAAATTGACTTTGA+GGG + chr7_3:65478843-65478862 Msa1117190:five_prime_UTR 40.0%
! GACTTTGAGGGTTGATCATA+TGG + chr7_3:65478855-65478874 Msa1117190:five_prime_UTR 40.0%
!! ATATGGACTGGACTTCTCAT+AGG + chr7_3:65478872-65478891 Msa1117190:five_prime_UTR 40.0%
!! ATGTGTTGGTTCTCAATGCT+GGG + chr7_3:65478908-65478927 Msa1117190:five_prime_UTR 40.0%
GAGAAGACCGTCAAAATGTA+AGG + chr7_3:65478946-65478965 Msa1117190:intron 40.0%
! AGGCCTAATGTTTTCAAAGC+AGG - chr7_3:65479113-65479132 None:intergenic 40.0%
ACAGATAATAGGTCAGGCTA+AGG - chr7_3:65479133-65479152 None:intergenic 40.0%
CAAAGTAACTTATACGCCCA+AGG - chr7_3:65479186-65479205 None:intergenic 40.0%
! TGGGCGTATAAGTTACTTTG+TGG + chr7_3:65479186-65479205 Msa1117190:intron 40.0%
! AGGGGTTGTTACTTCCAAAT+AGG + chr7_3:65479309-65479328 Msa1117190:intron 40.0%
! GGGGTTGTTACTTCCAAATA+GGG + chr7_3:65479310-65479329 Msa1117190:intron 40.0%
! GGGTTGTTACTTCCAAATAG+GGG + chr7_3:65479311-65479330 Msa1117190:five_prime_UTR 40.0%
! TTGTTACTTCCAAATAGGGG+AGG + chr7_3:65479314-65479333 Msa1117190:five_prime_UTR 40.0%
GACTTGAGACAGTAGTTGAT+TGG + chr7_3:65479386-65479405 Msa1117190:CDS 40.0%
! AATGGACAGGAGCATAAGTT+CGG - chr7_3:65479453-65479472 None:intergenic 40.0%
TAGACAAACCTGAAATGGAC+AGG - chr7_3:65479466-65479485 None:intergenic 40.0%
GTAATCACACATGTTGGTGT+CGG + chr7_3:65479665-65479684 Msa1117190:intron 40.0%
! TTTCCTTTCACTGCAGCTTT+TGG + chr7_3:65479825-65479844 Msa1117190:intron 40.0%
ACACATACGTGTCTGCTAAA+AGG - chr7_3:65479942-65479961 None:intergenic 40.0%
ATGTAGAGAATCTGGAGGTT+TGG + chr7_3:65480030-65480049 Msa1117190:intron 40.0%
AAATCTAAGTACGCAGTGCT+TGG + chr7_3:65480107-65480126 Msa1117190:intron 40.0%
AGGTGAATTTGGCAGAATCA+CGG - chr7_3:65480242-65480261 None:intergenic 40.0%
! GTTTGGATCTGAGGTGAATT+TGG - chr7_3:65480253-65480272 None:intergenic 40.0%
ATTCACCTCAGATCCAAACA+TGG + chr7_3:65480254-65480273 Msa1117190:intron 40.0%
TTCACCTCAGATCCAAACAT+GGG + chr7_3:65480255-65480274 Msa1117190:intron 40.0%
AGTATTACCAAGCCCATGTT+TGG - chr7_3:65480270-65480289 None:intergenic 40.0%
GGATATCAGATTCAGTCCAT+TGG + chr7_3:65480299-65480318 Msa1117190:intron 40.0%
ATTCAGTCCATTGGATGCTA+GGG + chr7_3:65480308-65480327 Msa1117190:intron 40.0%
! TAGTTTTCCCTAGCATCCAA+TGG - chr7_3:65480318-65480337 None:intergenic 40.0%
TCGGAAACACTACCTGATTT+AGG + chr7_3:65480479-65480498 Msa1117190:CDS 40.0%
AGAATATCGTTCCACGAATC+GGG - chr7_3:65480725-65480744 None:intergenic 40.0%
! TCTCAAGAGGAAGGCTTTTT+CGG + chr7_3:65480757-65480776 Msa1117190:CDS 40.0%
CATGAAGTTGGGAGCTAAAT+TGG + chr7_3:65480894-65480913 Msa1117190:three_prime_UTR 40.0%
AGCTAAATTGGCCATCTTTG+TGG + chr7_3:65480906-65480925 Msa1117190:three_prime_UTR 40.0%
AGTGAATCTGACCACAAAGA+TGG - chr7_3:65480920-65480939 None:intergenic 40.0%
!!! TGTTTTGACCCTCTTTGTAG+TGG + chr7_3:65481388-65481407 Msa1117190:three_prime_UTR 40.0%
GAGAAAATCCATGTGGGTCA+TGG - chr7_3:65477215-65477234 None:intergenic 45.0%
!!! GGTTTTCGTTGCTCTGAGAA+TGG + chr7_3:65477532-65477551 Msa1117190:five_prime_UTR 45.0%
CCTTGGCAAGTTGCAATCTT+TGG - chr7_3:65477596-65477615 None:intergenic 45.0%
CCAAAGATTGCAACTTGCCA+AGG + chr7_3:65477593-65477612 Msa1117190:five_prime_UTR 45.0%
AAAGGGGTTGCTCAAAACCT+TGG - chr7_3:65477613-65477632 None:intergenic 45.0%
TCCAGCTAGGATTCAAACTC+GGG - chr7_3:65478305-65478324 None:intergenic 45.0%
TTGACCAGACTATTACCTCC+TGG + chr7_3:65478332-65478351 Msa1117190:intron 45.0%
TAAACTAGAGTTCGACCAGG+AGG - chr7_3:65478350-65478369 None:intergenic 45.0%
TGGTAAACTAGAGTTCGACC+AGG - chr7_3:65478353-65478372 None:intergenic 45.0%
! GGTCGAACTCTAGTTTACCA+AGG + chr7_3:65478353-65478372 Msa1117190:intron 45.0%
TACAAAGCACACAGGCTTCT+TGG + chr7_3:65478729-65478748 Msa1117190:five_prime_UTR 45.0%
! TGAGGGTTGATCATATGGAC+TGG + chr7_3:65478860-65478879 Msa1117190:five_prime_UTR 45.0%
!! GATGTGTTGGTTCTCAATGC+TGG + chr7_3:65478907-65478926 Msa1117190:five_prime_UTR 45.0%
ATGTGATTAGGGGTGGGAAT+AGG + chr7_3:65479056-65479075 Msa1117190:intron 45.0%
CCTACGACAGATAATAGGTC+AGG - chr7_3:65479139-65479158 None:intergenic 45.0%
CCTGACCTATTATCTGTCGT+AGG + chr7_3:65479136-65479155 Msa1117190:intron 45.0%
ATGGGCCTACGACAGATAAT+AGG - chr7_3:65479144-65479163 None:intergenic 45.0%
TCTTCACTTCCTCCCCTATT+TGG - chr7_3:65479326-65479345 None:intergenic 45.0%
! CAGGAGCATAAGTTCGGAAA+AGG - chr7_3:65479447-65479466 None:intergenic 45.0%
CTTATGCTCCTGTCCATTTC+AGG + chr7_3:65479455-65479474 Msa1117190:CDS 45.0%
CAGTGTCGTATATTCGTGTC+CGG - chr7_3:65479613-65479632 None:intergenic 45.0%
TAGCCAAAAGCTGCAGTGAA+AGG - chr7_3:65479831-65479850 None:intergenic 45.0%
AAGTACGCAGTGCTTGGAAT+CGG + chr7_3:65480113-65480132 Msa1117190:intron 45.0%
GTGAATTTGGCAGAATCACG+GGG - chr7_3:65480240-65480259 None:intergenic 45.0%
GGTGAATTTGGCAGAATCAC+GGG - chr7_3:65480241-65480260 None:intergenic 45.0%
GATTCAGTCCATTGGATGCT+AGG + chr7_3:65480307-65480326 Msa1117190:intron 45.0%
TGTTGTTGATGTATCAGGGG+TGG + chr7_3:65480428-65480447 Msa1117190:intron 45.0%
!! TACTGGTGGTGGTTGTCATT+CGG + chr7_3:65480460-65480479 Msa1117190:CDS 45.0%
! AAATGAATGTCGGAGAGTGC+AGG - chr7_3:65480512-65480531 None:intergenic 45.0%
TTACTATATCGGGCCAGACA+AGG + chr7_3:65480646-65480665 Msa1117190:CDS 45.0%
TACTATATCGGGCCAGACAA+GGG + chr7_3:65480647-65480666 Msa1117190:CDS 45.0%
TGCTCTTCTTCTCAAGAGGA+AGG + chr7_3:65480748-65480767 Msa1117190:CDS 45.0%
CACCAATGATTGAGAAGGGT+TGG - chr7_3:65480869-65480888 None:intergenic 45.0%
ATGGCAGACCACTACAAAGA+GGG - chr7_3:65481399-65481418 None:intergenic 45.0%
AATGGCAGACCACTACAAAG+AGG - chr7_3:65481400-65481419 None:intergenic 45.0%
GGGAGAGCAGATAAGCTTAT+AGG + chr7_3:65481448-65481467 Msa1117190:three_prime_UTR 45.0%
!!! ATTATATTTTGAAAATTATT+TGG + chr7_3:65478274-65478293 Msa1117190:intron 5.0%
!!! TTATATTTTGAAAATTATTT+GGG + chr7_3:65478275-65478294 Msa1117190:intron 5.0%
!!! ATATACAAAATAAATTTTTT+TGG + chr7_3:65481097-65481116 Msa1117190:three_prime_UTR 5.0%
TGAATAGGAGGAGGAGGAGA+AGG - chr7_3:65477406-65477425 None:intergenic 50.0%
ACCCGAGTTTGAATCCTAGC+TGG + chr7_3:65478301-65478320 Msa1117190:intron 50.0%
TCGACCAGGAGGTAATAGTC+TGG - chr7_3:65478339-65478358 None:intergenic 50.0%
!! TCCTGGGTACCGAATGGTTA+AGG + chr7_3:65478384-65478403 Msa1117190:intron 50.0%
! TGGACTGGACTTCTCATAGG+TGG + chr7_3:65478875-65478894 Msa1117190:five_prime_UTR 50.0%
GTGGAGAGATGCAGATGTGT+TGG + chr7_3:65478894-65478913 Msa1117190:five_prime_UTR 50.0%
TGGTTCTCAATGCTGGGCAT+TGG + chr7_3:65478914-65478933 Msa1117190:five_prime_UTR 50.0%
!! TTCTCAATGCTGGGCATTGG+TGG + chr7_3:65478917-65478936 Msa1117190:five_prime_UTR 50.0%
TTTCAAAGCAGGTCAGGGTC+AGG - chr7_3:65479102-65479121 None:intergenic 50.0%
GGATTGCCCGTGAAGTAAAC+AGG + chr7_3:65479407-65479426 Msa1117190:CDS 50.0%
CAAGCCCATGTTTGGATCTG+AGG - chr7_3:65480262-65480281 None:intergenic 50.0%
CTCAGATCCAAACATGGGCT+TGG + chr7_3:65480260-65480279 Msa1117190:intron 50.0%
GACACCAATGGCTACAGTCT+TGG - chr7_3:65480691-65480710 None:intergenic 50.0%
CGCCAACCCTTCTCAATCAT+TGG + chr7_3:65480864-65480883 Msa1117190:three_prime_UTR 50.0%
! AATAGGACCGGAGGGAGTAT+TGG + chr7_3:65481289-65481308 Msa1117190:intron 50.0%
ATTCGGTACCCAGGAGAAGG+GGG - chr7_3:65478379-65478398 None:intergenic 55.0%
CATTCGGTACCCAGGAGAAG+GGG - chr7_3:65478380-65478399 None:intergenic 55.0%
CCATTCGGTACCCAGGAGAA+GGG - chr7_3:65478381-65478400 None:intergenic 55.0%
ACCATTCGGTACCCAGGAGA+AGG - chr7_3:65478382-65478401 None:intergenic 55.0%
GCCTTAACCATTCGGTACCC+AGG - chr7_3:65478388-65478407 None:intergenic 55.0%
ACGCAGTGCTTGGAATCGGA+AGG + chr7_3:65480117-65480136 Msa1117190:intron 55.0%
GATGTATCAGGGGTGGTGAC+TGG + chr7_3:65480435-65480454 Msa1117190:intron 55.0%
AGGGGTGGTGACTGGAATAC+TGG + chr7_3:65480443-65480462 Msa1117190:intron 55.0%
GGTGGTGACTGGAATACTGG+TGG + chr7_3:65480446-65480465 Msa1117190:CDS 55.0%
GGTGACTGGAATACTGGTGG+TGG + chr7_3:65480449-65480468 Msa1117190:CDS 55.0%
GCAGGCACAGAGCCTAAATC+AGG - chr7_3:65480494-65480513 None:intergenic 55.0%
CGCGCGTTGTGACAAGACAT+TGG - chr7_3:65480546-65480565 None:intergenic 55.0%
TCACACAAATGTCGGCACGC+AGG + chr7_3:65480603-65480622 Msa1117190:CDS 55.0%
ATGTCGGCACGCAGGAAAGA+CGG + chr7_3:65480611-65480630 Msa1117190:CDS 55.0%
ACAGTCTTGGCGCTGCATAG+AGG - chr7_3:65480678-65480697 None:intergenic 55.0%
AGCGCCAAGACTGTAGCCAT+TGG + chr7_3:65480684-65480703 Msa1117190:CDS 55.0%
! TGTAGCCATTGGTGTCTCCC+TGG + chr7_3:65480695-65480714 Msa1117190:CDS 55.0%
GAACACCAGGGAGACACCAA+TGG - chr7_3:65480703-65480722 None:intergenic 55.0%
TCCACGAATCGGGAACACCA+GGG - chr7_3:65480715-65480734 None:intergenic 55.0%
TTCCACGAATCGGGAACACC+AGG - chr7_3:65480716-65480735 None:intergenic 55.0%
TTACCAAGGCCCCCTTCTCC+TGG + chr7_3:65478367-65478386 Msa1117190:intron 60.0%
TACCAAGGCCCCCTTCTCCT+GGG + chr7_3:65478368-65478387 Msa1117190:intron 60.0%
!! CCCTTCTCCTGGGTACCGAA+TGG + chr7_3:65478378-65478397 Msa1117190:intron 60.0%
TGCAAGGACGGCCTCCTCAT+GGG + chr7_3:65478812-65478831 Msa1117190:five_prime_UTR 60.0%
! CTCCTCATGGGGCACCTTAC+CGG + chr7_3:65478824-65478843 Msa1117190:five_prime_UTR 60.0%
! TCCTCATGGGGCACCTTACC+GGG + chr7_3:65478825-65478844 Msa1117190:five_prime_UTR 60.0%
GAATCACGGGGTTCCACCGT+TGG - chr7_3:65480228-65480247 None:intergenic 60.0%
ATAGAGGCTGGGCCCTTGTC+TGG - chr7_3:65480662-65480681 None:intergenic 60.0%
CTTGGCGCTGCATAGAGGCT+GGG - chr7_3:65480673-65480692 None:intergenic 60.0%
TCTTGGCGCTGCATAGAGGC+TGG - chr7_3:65480674-65480693 None:intergenic 60.0%
! TCCCTGGTGTTCCCGATTCG+TGG + chr7_3:65480711-65480730 Msa1117190:CDS 60.0%
TACCCAGGAGAAGGGGGCCT+TGG - chr7_3:65478373-65478392 None:intergenic 65.0%
GTGCAAGGACGGCCTCCTCA+TGG + chr7_3:65478811-65478830 Msa1117190:five_prime_UTR 65.0%
GCAAGGACGGCCTCCTCATG+GGG + chr7_3:65478813-65478832 Msa1117190:five_prime_UTR 65.0%
! CGGTAAGGTGCCCCATGAGG+AGG - chr7_3:65478826-65478845 None:intergenic 65.0%
! ACCCGGTAAGGTGCCCCATG+AGG - chr7_3:65478829-65478848 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 65476875 65481628 65476875 ID=Msa1117190;Name=Msa1117190
chr7_3 mRNA 65476875 65481628 65476875 ID=Msa1117190-mRNA-1;Parent=Msa1117190;Name=Msa1117190-mRNA-1;_AED=0.05;_eAED=0.05;_QI=1183|1|1|1|0.5|0.2|5|681|161
chr7_3 exon 65476875 65477614 65476875 ID=Msa1117190-mRNA-1:exon:15543;Parent=Msa1117190-mRNA-1
chr7_3 exon 65478573 65478962 65478573 ID=Msa1117190-mRNA-1:exon:15544;Parent=Msa1117190-mRNA-1
chr7_3 exon 65479311 65479476 65479311 ID=Msa1117190-mRNA-1:exon:15545;Parent=Msa1117190-mRNA-1
chr7_3 exon 65480445 65481171 65480445 ID=Msa1117190-mRNA-1:exon:15546;Parent=Msa1117190-mRNA-1
chr7_3 exon 65481302 65481628 65481302 ID=Msa1117190-mRNA-1:exon:15547;Parent=Msa1117190-mRNA-1
chr7_3 five_prime_UTR 65476875 65477614 65476875 ID=Msa1117190-mRNA-1:five_prime_utr;Parent=Msa1117190-mRNA-1
chr7_3 five_prime_UTR 65478573 65478962 65478573 ID=Msa1117190-mRNA-1:five_prime_utr;Parent=Msa1117190-mRNA-1
chr7_3 five_prime_UTR 65479311 65479363 65479311 ID=Msa1117190-mRNA-1:five_prime_utr;Parent=Msa1117190-mRNA-1
chr7_3 CDS 65479364 65479476 65479364 ID=Msa1117190-mRNA-1:cds;Parent=Msa1117190-mRNA-1
chr7_3 CDS 65480445 65480817 65480445 ID=Msa1117190-mRNA-1:cds;Parent=Msa1117190-mRNA-1
chr7_3 three_prime_UTR 65480818 65481171 65480818 ID=Msa1117190-mRNA-1:three_prime_utr;Parent=Msa1117190-mRNA-1
chr7_3 three_prime_UTR 65481302 65481628 65481302 ID=Msa1117190-mRNA-1:three_prime_utr;Parent=Msa1117190-mRNA-1
Gene Sequence

>Msa1117190

ATGCTTTCAGATTATCAGTTGAGACTTGAGACAGTAGTTGATTGGATTGCCCGTGAAGTAAACAGGAACAAAACATATGTCCTTTTCCGAACTTATGCTCCTGTCCATTTCAGGGGTGGTGACTGGAATACTGGTGGTGGTTGTCATTCGGAAACACTACCTGATTTAGGCTCTGTGCCTGCACTCTCCGACATTCATTTCAGTACTGTCACCAATGTCTTGTCACAACGCGCGAGCAAATCACATGTTTTGAATGTGGACTTGCTTAATGTCACACAAATGTCGGCACGCAGGAAAGACGGTCATGCATCTATTTACTATATCGGGCCAGACAAGGGCCCAGCCTCTATGCAGCGCCAAGACTGTAGCCATTGGTGTCTCCCTGGTGTTCCCGATTCGTGGAACGATATTCTTTATGCTCTTCTTCTCAAGAGGAAGGCTTTTTCGGACCGCAATACAACAAAAGTTTCTCAAGTTACTCTATAA
Protein sequence

>Msa1117190

MLSDYQLRLETVVDWIAREVNRNKTYVLFRTYAPVHFRGGDWNTGGGCHSETLPDLGSVPALSDIHFSTVTNVLSQRASKSHVLNVDLLNVTQMSARRKDGHASIYYIGPDKGPASMQRQDCSHWCLPGVPDSWNDILYALLLKRKAFSDRNTTKVSQVTL*