Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117250 | XP_039683517.1 | 98.656 | 521 | 6 | 1 | 1 | 520 | 1 | 521 | 0.0 | 1052 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117250 | sp|Q9SY03|FB219_ARATH | 39.254 | 456 | 223 | 9 | 9 | 449 | 12 | 428 | 5.25e-84 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117250 | A0A396H436 | 98.656 | 521 | 6 | 1 | 1 | 520 | 1 | 521 | 0.0 | 1052 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1076090 | Msa1117250 | 0.880239 | 6.462952e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117250 | MtrunA17_Chr7g0259911 | 98.656 | 521 | 6 | 1 | 1 | 520 | 1 | 521 | 0.0 | 1052 |
| Msa1117250 | MtrunA17_Chr8g0359461 | 64.167 | 120 | 4 | 2 | 361 | 453 | 1 | 108 | 3.92e-41 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117250 | AT4G02760.2 | 39.254 | 456 | 223 | 9 | 9 | 449 | 12 | 428 | 5.34e-85 | 272 |
| Msa1117250 | AT4G02760.6 | 38.696 | 460 | 225 | 9 | 9 | 449 | 12 | 433 | 3.67e-84 | 269 |
| Msa1117250 | AT4G02760.1 | 38.696 | 460 | 225 | 9 | 9 | 449 | 12 | 433 | 3.67e-84 | 269 |
| Msa1117250 | AT4G02760.4 | 38.696 | 460 | 225 | 9 | 9 | 449 | 12 | 433 | 3.67e-84 | 269 |
| Msa1117250 | AT4G02760.8 | 38.696 | 460 | 225 | 9 | 9 | 449 | 12 | 433 | 3.67e-84 | 269 |
| Msa1117250 | AT4G02760.9 | 38.696 | 460 | 225 | 9 | 9 | 449 | 12 | 433 | 3.67e-84 | 269 |
| Msa1117250 | AT4G02760.5 | 38.696 | 460 | 225 | 9 | 9 | 449 | 12 | 433 | 3.67e-84 | 269 |
| Msa1117250 | AT4G02740.1 | 38.578 | 464 | 235 | 10 | 12 | 462 | 3 | 429 | 1.96e-83 | 267 |
| Msa1117250 | AT4G02760.7 | 38.696 | 460 | 225 | 9 | 9 | 449 | 12 | 433 | 2.57e-83 | 269 |
| Msa1117250 | AT4G02760.3 | 38.696 | 460 | 225 | 9 | 9 | 449 | 12 | 433 | 2.57e-83 | 269 |
| Msa1117250 | AT4G02740.2 | 38.578 | 464 | 235 | 10 | 12 | 462 | 40 | 466 | 7.09e-83 | 267 |
| Msa1117250 | AT4G08535.1 | 39.583 | 288 | 149 | 6 | 113 | 393 | 1 | 270 | 1.75e-49 | 172 |
| Msa1117250 | AT4G02733.1 | 40.310 | 258 | 132 | 6 | 52 | 301 | 45 | 288 | 6.60e-45 | 160 |
| Msa1117250 | AT4G08535.2 | 39.098 | 266 | 137 | 6 | 135 | 393 | 2 | 249 | 3.37e-43 | 155 |
| Msa1117250 | AT4G02735.1 | 29.104 | 402 | 167 | 9 | 33 | 411 | 33 | 339 | 2.20e-37 | 142 |
| Msa1117250 | AT4G08535.3 | 36.752 | 234 | 123 | 6 | 113 | 339 | 1 | 216 | 1.26e-30 | 120 |
Find 142 sgRNAs with CRISPR-Local
Find 455 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCGATCGCGCTCTCAAAA+TGG | 0.178457 | 7_3:+65539294 | Msa1117250:CDS |
| GCCTCCAAAACCTGCTTTAT+AGG | 0.199316 | 7_3:-65544407 | None:intergenic |
| GCACCACCATCCCCACTTAA+AGG | 0.231839 | 7_3:-65541763 | None:intergenic |
| TTAATGGCGACATTGAAAAT+TGG | 0.263402 | 7_3:-65544774 | None:intergenic |
| CCATATACATTCTGCAAATA+TGG | 0.269568 | 7_3:-65545361 | None:intergenic |
| CCATATTTGCAGAATGTATA+TGG | 0.272736 | 7_3:+65545361 | Msa1117250:three_prime_UTR |
| TAATAATAATGTATTGATTC+GGG | 0.274849 | 7_3:+65539063 | Msa1117250:five_prime_UTR |
| CGACATTGAAAATTGGTTAC+AGG | 0.281324 | 7_3:-65544767 | None:intergenic |
| CCTGTTACTGCTTGTCCTCT+TGG | 0.285440 | 7_3:+65541616 | Msa1117250:CDS |
| TATGCCTATAAAGCAGGTTT+TGG | 0.288911 | 7_3:+65544403 | Msa1117250:CDS |
| ACATGTTCGACTTCCATTCT+AGG | 0.295669 | 7_3:-65539175 | None:intergenic |
| ATTTGCATTTGCAGGGATTT+CGG | 0.306302 | 7_3:+65543766 | Msa1117250:intron |
| ACATGCTAAGCCTTCCCTAT+TGG | 0.311650 | 7_3:-65544242 | None:intergenic |
| TCCTCCTGACCTCACCTTCA+AGG | 0.313422 | 7_3:+65539393 | Msa1117250:CDS |
| GAAGAAGAAGAAGATGGAAT+TGG | 0.331391 | 7_3:-65539115 | None:intergenic |
| ATAATCATAATTCAATTGTT+TGG | 0.335769 | 7_3:+65539365 | Msa1117250:CDS |
| CCAAGAGGACAAGCAGTAAC+AGG | 0.340204 | 7_3:-65541616 | None:intergenic |
| TAAAGTTCGTATACTGGTTA+AGG | 0.346097 | 7_3:+65542613 | Msa1117250:CDS |
| GACAAGATGCGGTGATTTAC+GGG | 0.350617 | 7_3:+65544715 | Msa1117250:CDS |
| CTCCTTGATCTGGAAATTGT+TGG | 0.353311 | 7_3:+65541963 | Msa1117250:CDS |
| GGACAAGATGCGGTGATTTA+CGG | 0.361607 | 7_3:+65544714 | Msa1117250:CDS |
| ATAATAATAATGTATTGATT+CGG | 0.372347 | 7_3:+65539062 | Msa1117250:five_prime_UTR |
| CAATCACAGGAAGTTTCTTA+AGG | 0.375965 | 7_3:+65543823 | Msa1117250:CDS |
| TGATTGTAAAGTTCGTATAC+TGG | 0.377222 | 7_3:+65542607 | Msa1117250:CDS |
| ATCGATCGCGCTCTCAAAAT+GGG | 0.390635 | 7_3:+65539295 | Msa1117250:CDS |
| TTATCATTCCATGAATAGTT+AGG | 0.393527 | 7_3:-65541688 | None:intergenic |
| TAATGTATTGATTCGGGGTA+TGG | 0.399226 | 7_3:+65539069 | Msa1117250:exon |
| TAGAGGTGCCTAACTATTCA+TGG | 0.405469 | 7_3:+65541680 | Msa1117250:CDS |
| GAAGATGGAATTGGAATCTC+AGG | 0.417083 | 7_3:-65539106 | None:intergenic |
| AGTGGGGATGGTGGTGCACC+AGG | 0.423655 | 7_3:+65541769 | Msa1117250:CDS |
| AATGTCGCCATTAATTGAAA+AGG | 0.424590 | 7_3:+65544783 | Msa1117250:three_prime_UTR |
| TTAAACAGGACATATCCAAT+AGG | 0.424849 | 7_3:+65544227 | Msa1117250:intron |
| CTAACTTCTTTATCTCTTCG+AGG | 0.427099 | 7_3:+65542572 | Msa1117250:CDS |
| ATTGTTTACTAGCTCGGAAC+AGG | 0.428334 | 7_3:-65542540 | None:intergenic |
| CCTTTACAATATTGAGAGAA+TGG | 0.435585 | 7_3:+65541899 | Msa1117250:CDS |
| TGATTGAAGAAGATTCTCTA+AGG | 0.437839 | 7_3:-65539251 | None:intergenic |
| CACCACCATCCCCACTTAAA+GGG | 0.440950 | 7_3:-65541762 | None:intergenic |
| TTCCAACAATTTCCAGATCA+AGG | 0.442939 | 7_3:-65541965 | None:intergenic |
| AGGGGAGCAGTAGGGGAAGA+AGG | 0.451067 | 7_3:+65545209 | Msa1117250:intron |
| GCCTGGTATGCGTGTGGTGG+CGG | 0.454462 | 7_3:+65544433 | Msa1117250:CDS |
| AACTACTGCATTGTTAACCT+TGG | 0.462943 | 7_3:-65540205 | None:intergenic |
| GGACAATAATCTAGTGAAGT+TGG | 0.463367 | 7_3:+65544804 | Msa1117250:three_prime_UTR |
| ACTACTGCATTGTTAACCTT+GGG | 0.465125 | 7_3:-65540204 | None:intergenic |
| CAGTATTATGCCTATAAAGC+AGG | 0.469910 | 7_3:+65544397 | Msa1117250:intron |
| TCCGCAGTTGGCGTTGATCC+TGG | 0.470428 | 7_3:-65545244 | None:intergenic |
| TACTACAGCGACCATGTTAG+TGG | 0.471907 | 7_3:+65544681 | Msa1117250:CDS |
| GTGCCCTTCTCTCCTTGATC+TGG | 0.474698 | 7_3:+65541953 | Msa1117250:CDS |
| TTAATAAGGTCTATTAAACT+TGG | 0.478191 | 7_3:+65541586 | Msa1117250:intron |
| CATGTTCGACTTCCATTCTA+GGG | 0.484619 | 7_3:-65539174 | None:intergenic |
| AGGACAATTGTTTACTAGCT+CGG | 0.488474 | 7_3:-65542546 | None:intergenic |
| TAAACAGGACATATCCAATA+GGG | 0.490183 | 7_3:+65544228 | Msa1117250:intron |
| GCGTTTGCGAGAGGAGTGTT+TGG | 0.490991 | 7_3:-65539338 | None:intergenic |
| AACCTTGGAGGCTGCAATGG+TGG | 0.491012 | 7_3:+65543942 | Msa1117250:CDS |
| ATTGATTCGGGGTATGGATA+CGG | 0.492399 | 7_3:+65539075 | Msa1117250:exon |
| TTGGCGTTGATCCTGGTGAC+CGG | 0.492764 | 7_3:-65545237 | None:intergenic |
| TCCATCACAAAACCCTAGAA+TGG | 0.493841 | 7_3:+65539162 | Msa1117250:CDS |
| ACTATTCATGGAATGATAAG+AGG | 0.495965 | 7_3:+65541692 | Msa1117250:CDS |
| TCAACGCCAACTGCGGACCT+TGG | 0.499744 | 7_3:+65545250 | Msa1117250:three_prime_UTR |
| AGAACCTTGAAGGTGAGGTC+AGG | 0.501213 | 7_3:-65539397 | None:intergenic |
| AAGGTGAGGTCAGGAGGAAG+AGG | 0.502601 | 7_3:-65539388 | None:intergenic |
| CTCTCTTGAGTTCATCATTG+TGG | 0.502856 | 7_3:+65545305 | Msa1117250:three_prime_UTR |
| ATATCTAACCTTCCTTCTGA+TGG | 0.503752 | 7_3:-65544461 | None:intergenic |
| CCATTCTCTCAATATTGTAA+AGG | 0.506658 | 7_3:-65541899 | None:intergenic |
| GCTTAGCATGTGAAGCTGAC+TGG | 0.507952 | 7_3:+65544254 | Msa1117250:CDS |
| TTGTTGATAGCGATTCTTGA+AGG | 0.508373 | 7_3:+65544109 | Msa1117250:CDS |
| GGGGTTGGACTGGGATGGAG+TGG | 0.508979 | 7_3:-65545384 | None:intergenic |
| AGGAACCTTGGAGGCTGCAA+TGG | 0.512358 | 7_3:+65543939 | Msa1117250:intron |
| TTAAGCCCTTTAAGTGGGGA+TGG | 0.512787 | 7_3:+65541757 | Msa1117250:CDS |
| ACCTTGGAGGCTGCAATGGT+GGG | 0.514057 | 7_3:+65543943 | Msa1117250:CDS |
| TAACTTCTTTATCTCTTCGA+GGG | 0.515520 | 7_3:+65542573 | Msa1117250:CDS |
| TCTTATTGGCTCTAATGTGC+AGG | 0.515614 | 7_3:+65545451 | Msa1117250:three_prime_UTR |
| TGCTGTTTAAGCCCTTTAAG+TGG | 0.515758 | 7_3:+65541751 | Msa1117250:CDS |
| TCCAGCTCGTTGAATCATAG+TGG | 0.517832 | 7_3:-65540229 | None:intergenic |
| AAATAGACAGCTAGTGTCAA+AGG | 0.519129 | 7_3:-65545502 | None:intergenic |
| TCATCATCATATTCAATCAC+AGG | 0.520643 | 7_3:+65543810 | Msa1117250:CDS |
| AGAATCTGAGAGAACCTTGA+AGG | 0.527773 | 7_3:-65539407 | None:intergenic |
| AGAAGGATATGCCGGTCACC+AGG | 0.532158 | 7_3:+65545226 | Msa1117250:three_prime_UTR |
| ATCCACTAGGGGAGCAGTAG+GGG | 0.534418 | 7_3:+65545202 | Msa1117250:intron |
| TTTAGCAACCACACGTCAGA+TGG | 0.539699 | 7_3:+65544627 | Msa1117250:CDS |
| TCCCACCATTGCAGCCTCCA+AGG | 0.539878 | 7_3:-65543944 | None:intergenic |
| CTTCCTCATTGCCACTAACA+TGG | 0.543836 | 7_3:-65544692 | None:intergenic |
| TCGATGAGATCGGTGTCAGC+AGG | 0.545296 | 7_3:-65539277 | None:intergenic |
| ACCTTGAAGGTGAGGTCAGG+AGG | 0.545718 | 7_3:-65539394 | None:intergenic |
| GCCACTATGATTCAACGAGC+TGG | 0.546622 | 7_3:+65540228 | Msa1117250:CDS |
| ATGCGCAGATCGAAGTTGCT+AGG | 0.547186 | 7_3:+65544086 | Msa1117250:intron |
| TATCCACTAGGGGAGCAGTA+GGG | 0.547501 | 7_3:+65545201 | Msa1117250:intron |
| TTATCCACTAGGGGAGCAGT+AGG | 0.550223 | 7_3:+65545200 | Msa1117250:intron |
| TTTGAGAACACTTGTTCCCA+AGG | 0.550522 | 7_3:+65540188 | Msa1117250:CDS |
| ATGATCGCATGATCAAAACT+TGG | 0.550522 | 7_3:-65545631 | None:intergenic |
| GCTGTTTAAGCCCTTTAAGT+GGG | 0.563261 | 7_3:+65541752 | Msa1117250:CDS |
| AATAGACAGCTAGTGTCAAA+GGG | 0.564218 | 7_3:-65545501 | None:intergenic |
| TATGATTCAACGAGCTGGAA+AGG | 0.564442 | 7_3:+65540233 | Msa1117250:CDS |
| GAGAGAAGGACGATCGGAGA+GGG | 0.565531 | 7_3:-65539215 | None:intergenic |
| ATTTCCAGATCAAGGAGAGA+AGG | 0.567819 | 7_3:-65541957 | None:intergenic |
| CATGTTAGTGGCAATGAGGA+AGG | 0.570563 | 7_3:+65544693 | Msa1117250:CDS |
| AACGAGCTGGAAAGGCACTA+AGG | 0.570675 | 7_3:+65540241 | Msa1117250:CDS |
| AGCCCTTTAAGTGGGGATGG+TGG | 0.573480 | 7_3:+65541760 | Msa1117250:CDS |
| ATTATAAGCGCGTTTGCGAG+AGG | 0.574554 | 7_3:-65539347 | None:intergenic |
| CTGTTTAAGCCCTTTAAGTG+GGG | 0.579312 | 7_3:+65541753 | Msa1117250:CDS |
| ATTAAAGTTGAGAAGATCCA+AGG | 0.584473 | 7_3:-65545267 | None:intergenic |
| ATCACAGGTGCTACAACTCT+AGG | 0.586080 | 7_3:+65544278 | Msa1117250:CDS |
| AAGCAGCGGATACAAAGCAC+AGG | 0.586758 | 7_3:-65540113 | None:intergenic |
| TTTCCAGATCAAGGAGAGAA+GGG | 0.588022 | 7_3:-65541956 | None:intergenic |
| AAGGCCTGGTATGCGTGTGG+TGG | 0.594456 | 7_3:+65544430 | Msa1117250:CDS |
| CTGAGAGAACCTTGAAGGTG+AGG | 0.594574 | 7_3:-65539402 | None:intergenic |
| CGGAGTATCCATCAGAAGGA+AGG | 0.602557 | 7_3:+65544453 | Msa1117250:CDS |
| ATGATAAGAGGTCTCGTCAA+GGG | 0.604431 | 7_3:+65541704 | Msa1117250:CDS |
| AAAACAAACGCTCAATCAAG+TGG | 0.605290 | 7_3:-65542398 | None:intergenic |
| GTAGGGGAAGAAGGATATGC+CGG | 0.606894 | 7_3:+65545218 | Msa1117250:three_prime_UTR |
| GTGAAGCTGACTGGTATCAC+AGG | 0.611859 | 7_3:+65544263 | Msa1117250:CDS |
| ATTCTCTAAGGAGAGATCGA+TGG | 0.611987 | 7_3:-65539239 | None:intergenic |
| GAGAGCGCGATCGATGAGAT+CGG | 0.612038 | 7_3:-65539287 | None:intergenic |
| GTGGGGATGGTGGTGCACCA+GGG | 0.612058 | 7_3:+65541770 | Msa1117250:CDS |
| AGAGATAAAGAAGTTAGATG+AGG | 0.613288 | 7_3:-65542566 | None:intergenic |
| GTGGCGGAGTATCCATCAGA+AGG | 0.617393 | 7_3:+65544449 | Msa1117250:CDS |
| TCCAACCCCTAAAAGAGAGG+TGG | 0.617422 | 7_3:+65545398 | Msa1117250:three_prime_UTR |
| GGCAAGGCCTGGTATGCGTG+TGG | 0.617823 | 7_3:+65544427 | Msa1117250:CDS |
| ACCAGGATCAACGCCAACTG+CGG | 0.620844 | 7_3:+65545243 | Msa1117250:three_prime_UTR |
| CGACCATGTTAGTGGCAATG+AGG | 0.621373 | 7_3:+65544689 | Msa1117250:CDS |
| TTACGGGGAAAGTTCAGATG+AGG | 0.621590 | 7_3:+65544731 | Msa1117250:CDS |
| GATGGAGAGAGAAGGACGAT+CGG | 0.623334 | 7_3:-65539221 | None:intergenic |
| TTTCTGACTGTAGAAACCGA+TGG | 0.624897 | 7_3:-65541649 | None:intergenic |
| AATAATAATGTATTGATTCG+GGG | 0.625695 | 7_3:+65539064 | Msa1117250:five_prime_UTR |
| GAAGATCCAAGGTCCGCAGT+TGG | 0.631346 | 7_3:-65545256 | None:intergenic |
| CAAGAGGACAAGCAGTAACA+GGG | 0.637270 | 7_3:-65541615 | None:intergenic |
| CAGGACATATCCAATAGGGA+AGG | 0.637784 | 7_3:+65544232 | Msa1117250:intron |
| AAATCGATCCATCTGACGTG+TGG | 0.639294 | 7_3:-65544635 | None:intergenic |
| CTTCTAGTCATGTTGAGCTG+AGG | 0.639397 | 7_3:+65542346 | Msa1117250:intron |
| CAGTCCAACCCCTAAAAGAG+AGG | 0.641615 | 7_3:+65545395 | Msa1117250:three_prime_UTR |
| GAGAGATCGATGGAGAGAGA+AGG | 0.643568 | 7_3:-65539229 | None:intergenic |
| AATGATAAGAGGTCTCGTCA+AGG | 0.647648 | 7_3:+65541703 | Msa1117250:CDS |
| AGAGGGAGAGAAATTCTTCG+AGG | 0.649454 | 7_3:-65539198 | None:intergenic |
| CCCTTAAAATTAAGACCTCG+AGG | 0.650083 | 7_3:-65543971 | None:intergenic |
| AATGATGAACTCAAGAGAGT+CGG | 0.654903 | 7_3:-65545301 | None:intergenic |
| AGTCAGAAAAGCTATTGTAG+AGG | 0.660901 | 7_3:+65541663 | Msa1117250:CDS |
| CAATGAGGAAGGACAAGATG+CGG | 0.667114 | 7_3:+65544704 | Msa1117250:CDS |
| TCAAGATTCTCATAGCACAA+AGG | 0.675686 | 7_3:-65540165 | None:intergenic |
| GGATTGCATGCATCTCAAAG+AGG | 0.675810 | 7_3:+65543992 | Msa1117250:CDS |
| ACAAGATGCGGTGATTTACG+GGG | 0.689697 | 7_3:+65544716 | Msa1117250:CDS |
| CAATGGTGGGAATTTCCTCG+AGG | 0.701306 | 7_3:+65543956 | Msa1117250:CDS |
| AGAGAGAAGGACGATCGGAG+AGG | 0.701741 | 7_3:-65539216 | None:intergenic |
| GATGGTTGACAAAATCCAAG+AGG | 0.724008 | 7_3:-65541631 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATAATAATGTATTGATT+CGG | + | chr7_3:65539062-65539081 | Msa1117250:five_prime_UTR | 10.0% |
| !! | TAAAATTAAACAAAAAACAA+AGG | - | chr7_3:65539469-65539488 | None:intergenic | 10.0% |
| !!! | TATTTATTTTTAATAACGAA+AGG | + | chr7_3:65542149-65542168 | Msa1117250:intron | 10.0% |
| !! | TTTCAACAAATATATTTAAA+AGG | - | chr7_3:65542936-65542955 | None:intergenic | 10.0% |
| !!! | TAATAATAATGTATTGATTC+GGG | + | chr7_3:65539063-65539082 | Msa1117250:five_prime_UTR | 15.0% |
| !! | ATAATCATAATTCAATTGTT+TGG | + | chr7_3:65539365-65539384 | Msa1117250:CDS | 15.0% |
| !! | AACAAATTATTATTGTTCTA+TGG | + | chr7_3:65539903-65539922 | Msa1117250:intron | 15.0% |
| !! | AAATATAACATTGAAGTAAA+AGG | - | chr7_3:65540291-65540310 | None:intergenic | 15.0% |
| !! | AATATAATAACAACATAGAT+TGG | + | chr7_3:65540591-65540610 | Msa1117250:intron | 15.0% |
| !!! | TTTTTGAAGAAAAATTCAAA+TGG | - | chr7_3:65541094-65541113 | None:intergenic | 15.0% |
| !! | TTAAAAAAGTTATAACAAAC+GGG | - | chr7_3:65541135-65541154 | None:intergenic | 15.0% |
| !! | CTTAAAAAAGTTATAACAAA+CGG | - | chr7_3:65541136-65541155 | None:intergenic | 15.0% |
| !!! | AACAAATAATTAAGTTTGTT+TGG | - | chr7_3:65541366-65541385 | None:intergenic | 15.0% |
| !!! | CTGTTTTGTTTTTTTTAATA+AGG | + | chr7_3:65541572-65541591 | Msa1117250:intron | 15.0% |
| !! | TATTTAATGATATCATTGTT+AGG | + | chr7_3:65543040-65543059 | Msa1117250:intron | 15.0% |
| !! | ATAGAATCTAAATTAATTGA+AGG | - | chr7_3:65543070-65543089 | None:intergenic | 15.0% |
| !!! | AAGTAATTTTCTAGTATTAA+TGG | - | chr7_3:65543681-65543700 | None:intergenic | 15.0% |
| !! | TTGAAATTAATGCAAAATAT+GGG | - | chr7_3:65543747-65543766 | None:intergenic | 15.0% |
| !! | ATTGAAATTAATGCAAAATA+TGG | - | chr7_3:65543748-65543767 | None:intergenic | 15.0% |
| !! | TGTATTTAATTACATATTTC+TGG | + | chr7_3:65544364-65544383 | Msa1117250:intron | 15.0% |
| !! | CAAATATATGTAAATAGAAA+AGG | - | chr7_3:65544842-65544861 | None:intergenic | 15.0% |
| !! | GATTTACAAAAATAGATATA+TGG | + | chr7_3:65544876-65544895 | Msa1117250:intron | 15.0% |
| !! | TAAAGCAAATAACAAATATT+AGG | - | chr7_3:65545176-65545195 | None:intergenic | 15.0% |
| !!! | AATAATAATGTATTGATTCG+GGG | + | chr7_3:65539064-65539083 | Msa1117250:five_prime_UTR | 20.0% |
| !! | AAACAAAGGATAAAAAGTAA+AGG | - | chr7_3:65539455-65539474 | None:intergenic | 20.0% |
| !!! | TTTCTACTCTAAATCTTTTT+TGG | - | chr7_3:65539707-65539726 | None:intergenic | 20.0% |
| !!! | TATTTAATTTAATGTTGCCA+AGG | + | chr7_3:65540306-65540325 | Msa1117250:intron | 20.0% |
| !! | GTTGGAAATATATAGAAAAA+TGG | + | chr7_3:65540481-65540500 | Msa1117250:intron | 20.0% |
| !!! | TTTTTTCTTTCTGTTTTACA+GGG | - | chr7_3:65540838-65540857 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTTTCTGTTTTAC+AGG | - | chr7_3:65540839-65540858 | None:intergenic | 20.0% |
| !!! | CAGAAAATAGATTTTTTTAG+AGG | + | chr7_3:65541273-65541292 | Msa1117250:intron | 20.0% |
| !! | TTGGATACAACTATATAAAA+GGG | - | chr7_3:65541347-65541366 | None:intergenic | 20.0% |
| !! | TTTGGATACAACTATATAAA+AGG | - | chr7_3:65541348-65541367 | None:intergenic | 20.0% |
| !! | ATTTATGTTAGGATACAATA+AGG | - | chr7_3:65541552-65541571 | None:intergenic | 20.0% |
| !! | AAACAAAACAGATTTATGTT+AGG | - | chr7_3:65541563-65541582 | None:intergenic | 20.0% |
| !! | TTAATAAGGTCTATTAAACT+TGG | + | chr7_3:65541586-65541605 | Msa1117250:intron | 20.0% |
| !!! | TCTTAAATTCTATTTTTGCA+GGG | + | chr7_3:65541857-65541876 | Msa1117250:intron | 20.0% |
| !!! | ATGTTGGAATTTTATTGTAT+GGG | - | chr7_3:65542893-65542912 | None:intergenic | 20.0% |
| !!! | ATTGAATTTTGCCTATATTT+TGG | - | chr7_3:65543009-65543028 | None:intergenic | 20.0% |
| !!! | GTATTCTCTTTTAACTTTAT+TGG | - | chr7_3:65543173-65543192 | None:intergenic | 20.0% |
| !! | ATAATTTACGCTTATTAGTA+AGG | - | chr7_3:65543195-65543214 | None:intergenic | 20.0% |
| !!! | TCTGAATAATAATTTTGCAA+TGG | + | chr7_3:65543478-65543497 | Msa1117250:intron | 20.0% |
| !!! | TTATTGTCCTTTTCAATTAA+TGG | - | chr7_3:65544793-65544812 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTAAGAAGCAAAT+AGG | + | chr7_3:65545023-65545042 | Msa1117250:intron | 20.0% |
| !!! | CAGTTAACATTTATTTTGTT+CGG | - | chr7_3:65545585-65545604 | None:intergenic | 20.0% |
| !!! | AAATGTTAACTGATTTTTTC+AGG | + | chr7_3:65545593-65545612 | Msa1117250:three_prime_UTR | 20.0% |
| !! | CTTTTATTGTAGTCAATTGA+TGG | + | chr7_3:65539780-65539799 | Msa1117250:intron | 25.0% |
| ! | TGTTAAAAAGTGAAATCTCT+GGG | + | chr7_3:65540038-65540057 | Msa1117250:intron | 25.0% |
| ! | TTACATGAATCACTTATGAA+GGG | - | chr7_3:65540930-65540949 | None:intergenic | 25.0% |
| ! | ATTACATGAATCACTTATGA+AGG | - | chr7_3:65540931-65540950 | None:intergenic | 25.0% |
| ! | TGATTCATGTAATATGACAT+AGG | + | chr7_3:65540938-65540957 | Msa1117250:intron | 25.0% |
| !! | ATACTCCTAACACTATATTT+TGG | + | chr7_3:65540963-65540982 | Msa1117250:intron | 25.0% |
| !! | TTTGCGCATAATTAGTTTAA+TGG | + | chr7_3:65540999-65541018 | Msa1117250:intron | 25.0% |
| !!! | TATTTTAATCCGTAACAAAC+AGG | + | chr7_3:65541491-65541510 | Msa1117250:intron | 25.0% |
| ! | CAAAAGTTAATACACATTCA+GGG | - | chr7_3:65541517-65541536 | None:intergenic | 25.0% |
| ! | TTATCATTCCATGAATAGTT+AGG | - | chr7_3:65541691-65541710 | None:intergenic | 25.0% |
| ! | CTGCAAAAATAGAATTTAAG+AGG | - | chr7_3:65541858-65541877 | None:intergenic | 25.0% |
| !!! | CTCTTAAATTCTATTTTTGC+AGG | + | chr7_3:65541856-65541875 | Msa1117250:intron | 25.0% |
| ! | ATAAGTAATAAGGAAGAGAA+AGG | - | chr7_3:65542023-65542042 | None:intergenic | 25.0% |
| ! | GGAAACACTTATAAGTAATA+AGG | - | chr7_3:65542033-65542052 | None:intergenic | 25.0% |
| ! | CTTATCTCGATTTAATCATT+AGG | + | chr7_3:65542491-65542510 | Msa1117250:intron | 25.0% |
| ! | AGTTCATCAAAATCTCAAAT+GGG | - | chr7_3:65542699-65542718 | None:intergenic | 25.0% |
| ! | CTAAAATGTTTACAAGGAAA+AGG | + | chr7_3:65542775-65542794 | Msa1117250:intron | 25.0% |
| ! | CAAAAATTTGAACCAACAAA+TGG | - | chr7_3:65542812-65542831 | None:intergenic | 25.0% |
| !!! | CATTTGTTGGTTCAAATTTT+TGG | + | chr7_3:65542810-65542829 | Msa1117250:intron | 25.0% |
| !! | CATGTTGGAATTTTATTGTA+TGG | - | chr7_3:65542894-65542913 | None:intergenic | 25.0% |
| ! | AAATTCCAACATGTTAATCT+TGG | + | chr7_3:65542901-65542920 | Msa1117250:intron | 25.0% |
| ! | AATTCCAACATGTTAATCTT+GGG | + | chr7_3:65542902-65542921 | Msa1117250:intron | 25.0% |
| !! | TGTTTATATTTGAAACCAGA+GGG | - | chr7_3:65542963-65542982 | None:intergenic | 25.0% |
| !! | TTGTTTATATTTGAAACCAG+AGG | - | chr7_3:65542964-65542983 | None:intergenic | 25.0% |
| ! | TTGTTTCGTAGAAATAAAAG+AGG | - | chr7_3:65543102-65543121 | None:intergenic | 25.0% |
| ! | TAATTTCAATTTGCATTTGC+AGG | + | chr7_3:65543758-65543777 | Msa1117250:intron | 25.0% |
| ! | AATTTCAATTTGCATTTGCA+GGG | + | chr7_3:65543759-65543778 | Msa1117250:intron | 25.0% |
| !! | ACATAAAACCTTGATTTTTC+AGG | + | chr7_3:65543919-65543938 | Msa1117250:intron | 25.0% |
| ! | AAATTGCTTAAACATCTTGT+GGG | + | chr7_3:65544139-65544158 | Msa1117250:intron | 25.0% |
| ! | GTTAGATATTCTTTCGAATA+GGG | + | chr7_3:65544475-65544494 | Msa1117250:intron | 25.0% |
| ! | TATATTTGTGCAGAAAATGA+CGG | + | chr7_3:65544854-65544873 | Msa1117250:intron | 25.0% |
| ! | TAGGGATGAATTTAAAAGTT+AGG | + | chr7_3:65545075-65545094 | Msa1117250:intron | 25.0% |
| !!! | TGCTTTAAAATTTATCCACT+AGG | + | chr7_3:65545189-65545208 | Msa1117250:intron | 25.0% |
| !!! | GCTTTAAAATTTATCCACTA+GGG | + | chr7_3:65545190-65545209 | Msa1117250:intron | 25.0% |
| !!! | CTTTAAAATTTATCCACTAG+GGG | + | chr7_3:65545191-65545210 | Msa1117250:intron | 25.0% |
| !!! | CTGATTTTTTCAGGTATTAT+TGG | + | chr7_3:65545602-65545621 | Msa1117250:three_prime_UTR | 25.0% |
| !!! | ATTTTTTCAGGTATTATTGG+TGG | + | chr7_3:65545605-65545624 | Msa1117250:three_prime_UTR | 25.0% |
| TTCTTCTTCTTCTTCATCAA+TGG | + | chr7_3:65539126-65539145 | Msa1117250:CDS | 30.0% | |
| TGATTGAAGAAGATTCTCTA+AGG | - | chr7_3:65539254-65539273 | None:intergenic | 30.0% | |
| ATAAAAAGTAAAGGTAGCGT+AGG | - | chr7_3:65539446-65539465 | None:intergenic | 30.0% | |
| CAGTGAAAAAGTAAATCGAA+AGG | - | chr7_3:65539572-65539591 | None:intergenic | 30.0% | |
| AGTTCATGAACTACACTAAA+TGG | - | chr7_3:65539620-65539639 | None:intergenic | 30.0% | |
| TTAGTGTAGTTCATGAACTT+TGG | + | chr7_3:65539621-65539640 | Msa1117250:intron | 30.0% | |
| GTAGAAACTAAACGTGTTTA+TGG | + | chr7_3:65539720-65539739 | Msa1117250:intron | 30.0% | |
| CTGTTAAAAAGTGAAATCTC+TGG | + | chr7_3:65540037-65540056 | Msa1117250:intron | 30.0% | |
| AGCATGATAAGGAAATGATA+TGG | - | chr7_3:65540411-65540430 | None:intergenic | 30.0% | |
| ATCATTTCCTTATCATGCTT+AGG | + | chr7_3:65540412-65540431 | Msa1117250:intron | 30.0% | |
| ATAAAAAATCCCCCTCATTT+GGG | - | chr7_3:65540685-65540704 | None:intergenic | 30.0% | |
| AATAAAAAATCCCCCTCATT+TGG | - | chr7_3:65540686-65540705 | None:intergenic | 30.0% | |
| TGGAAGAAATAGAAGACATT+GGG | - | chr7_3:65540743-65540762 | None:intergenic | 30.0% | |
| TCGAACCAAAATATAGTGTT+AGG | - | chr7_3:65540971-65540990 | None:intergenic | 30.0% | |
| ! | TTTTACCCTGTAAACTTTGT+TGG | + | chr7_3:65541033-65541052 | Msa1117250:intron | 30.0% |
| TTTAGAGGAGAGAGAAAATA+AGG | + | chr7_3:65541288-65541307 | Msa1117250:intron | 30.0% | |
| TTAGAGGAGAGAGAAAATAA+GGG | + | chr7_3:65541289-65541308 | Msa1117250:intron | 30.0% | |
| CCAAAAGTTAATACACATTC+AGG | - | chr7_3:65541518-65541537 | None:intergenic | 30.0% | |
| ! | CCTGAATGTGTATTAACTTT+TGG | + | chr7_3:65541515-65541534 | Msa1117250:intron | 30.0% |
| ACTATTCATGGAATGATAAG+AGG | + | chr7_3:65541692-65541711 | Msa1117250:CDS | 30.0% | |
| ! | CTTTTCAGTTTTCAGTGATT+TGG | + | chr7_3:65541823-65541842 | Msa1117250:intron | 30.0% |
| CCATTCTCTCAATATTGTAA+AGG | - | chr7_3:65541902-65541921 | None:intergenic | 30.0% | |
| CCTTTACAATATTGAGAGAA+TGG | + | chr7_3:65541899-65541918 | Msa1117250:CDS | 30.0% | |
| AAAGGGAAAGGAAACAAATA+CGG | - | chr7_3:65542098-65542117 | None:intergenic | 30.0% | |
| TGATTAAATCGAGATAAGCA+GGG | - | chr7_3:65542489-65542508 | None:intergenic | 30.0% | |
| ATGATTAAATCGAGATAAGC+AGG | - | chr7_3:65542490-65542509 | None:intergenic | 30.0% | |
| AGAGATAAAGAAGTTAGATG+AGG | - | chr7_3:65542569-65542588 | None:intergenic | 30.0% | |
| TAACTTCTTTATCTCTTCGA+GGG | + | chr7_3:65542573-65542592 | Msa1117250:CDS | 30.0% | |
| TGATTGTAAAGTTCGTATAC+TGG | + | chr7_3:65542607-65542626 | Msa1117250:CDS | 30.0% | |
| ! | TAAAGTTCGTATACTGGTTA+AGG | + | chr7_3:65542613-65542632 | Msa1117250:CDS | 30.0% |
| CAGTTCATCAAAATCTCAAA+TGG | - | chr7_3:65542700-65542719 | None:intergenic | 30.0% | |
| !! | TTTGAGATTTTGATGAACTG+TGG | + | chr7_3:65542700-65542719 | Msa1117250:intron | 30.0% |
| TTCTCTATTCTACCAAATGT+GGG | - | chr7_3:65542753-65542772 | None:intergenic | 30.0% | |
| AGAAGGCTAAAATGTTTACA+AGG | + | chr7_3:65542769-65542788 | Msa1117250:intron | 30.0% | |
| !! | TATATTTTGGACCATCAAAC+TGG | - | chr7_3:65542996-65543015 | None:intergenic | 30.0% |
| ! | AGTTTGATGGTCCAAAATAT+AGG | + | chr7_3:65542995-65543014 | Msa1117250:intron | 30.0% |
| ! | TTGTTACTTATATTCGAAGC+TGG | + | chr7_3:65543217-65543236 | Msa1117250:intron | 30.0% |
| TAGACATCAACATCGTATAT+TGG | - | chr7_3:65543261-65543280 | None:intergenic | 30.0% | |
| !! | CATTTGACTTAAGTTTGTTG+AGG | + | chr7_3:65543281-65543300 | Msa1117250:intron | 30.0% |
| ! | TCTTTTCACCTTTTAATAGC+TGG | + | chr7_3:65543438-65543457 | Msa1117250:intron | 30.0% |
| TTTGCATACCAGCTATTAAA+AGG | - | chr7_3:65543449-65543468 | None:intergenic | 30.0% | |
| TTACTATCTCCTTCCTAATT+TGG | - | chr7_3:65543534-65543553 | None:intergenic | 30.0% | |
| CTTCTTGATATCTACTTATG+TGG | + | chr7_3:65543620-65543639 | Msa1117250:intron | 30.0% | |
| !! | TATGGGACTTTACTTTTACT+CGG | - | chr7_3:65543730-65543749 | None:intergenic | 30.0% |
| TCATCATCATATTCAATCAC+AGG | + | chr7_3:65543810-65543829 | Msa1117250:CDS | 30.0% | |
| !! | GGTTATAATAGATTTCTGGT+GGG | + | chr7_3:65544018-65544037 | Msa1117250:intron | 30.0% |
| CAAATTGCTTAAACATCTTG+TGG | + | chr7_3:65544138-65544157 | Msa1117250:intron | 30.0% | |
| ATTGGATATGTCCTGTTTAA+TGG | - | chr7_3:65544227-65544246 | None:intergenic | 30.0% | |
| TTAAACAGGACATATCCAAT+AGG | + | chr7_3:65544227-65544246 | Msa1117250:intron | 30.0% | |
| TAAACAGGACATATCCAATA+GGG | + | chr7_3:65544228-65544247 | Msa1117250:intron | 30.0% | |
| GGTTAGATATTCTTTCGAAT+AGG | + | chr7_3:65544474-65544493 | Msa1117250:intron | 30.0% | |
| TTAATGGCGACATTGAAAAT+TGG | - | chr7_3:65544777-65544796 | None:intergenic | 30.0% | |
| AATGTCGCCATTAATTGAAA+AGG | + | chr7_3:65544783-65544802 | Msa1117250:three_prime_UTR | 30.0% | |
| ! | AATAATCTAGTGAAGTTGGT+TGG | + | chr7_3:65544808-65544827 | Msa1117250:intron | 30.0% |
| TAGGCATATAGTAAATCTGT+TGG | + | chr7_3:65545042-65545061 | Msa1117250:intron | 30.0% | |
| ATCTGTTGGAAATTAGAGAT+AGG | + | chr7_3:65545056-65545075 | Msa1117250:intron | 30.0% | |
| TCTGTTGGAAATTAGAGATA+GGG | + | chr7_3:65545057-65545076 | Msa1117250:intron | 30.0% | |
| CTAAGAAACATTGAATCACA+AGG | - | chr7_3:65545117-65545136 | None:intergenic | 30.0% | |
| GTTGAACAAAACTGATGAAA+TGG | - | chr7_3:65545143-65545162 | None:intergenic | 30.0% | |
| ATTAAAGTTGAGAAGATCCA+AGG | - | chr7_3:65545270-65545289 | None:intergenic | 30.0% | |
| !!! | AGCAATTTTGTTATTGCTCT+TGG | + | chr7_3:65545335-65545354 | Msa1117250:three_prime_UTR | 30.0% |
| CCATATACATTCTGCAAATA+TGG | - | chr7_3:65545364-65545383 | None:intergenic | 30.0% | |
| CCATATTTGCAGAATGTATA+TGG | + | chr7_3:65545361-65545380 | Msa1117250:three_prime_UTR | 30.0% | |
| ! | GAAATTTTGTGCTCTCTTAT+TGG | + | chr7_3:65545437-65545456 | Msa1117250:three_prime_UTR | 30.0% |
| !! | TAATGTATTGATTCGGGGTA+TGG | + | chr7_3:65539069-65539088 | Msa1117250:exon | 35.0% |
| GAAGAAGAAGAAGATGGAAT+TGG | - | chr7_3:65539118-65539137 | None:intergenic | 35.0% | |
| GATGAAGAAGAAGAAGAAGA+TGG | - | chr7_3:65539124-65539143 | None:intergenic | 35.0% | |
| !! | AATTTGTTTTCACTCAGCAC+CGG | - | chr7_3:65539819-65539838 | None:intergenic | 35.0% |
| CTACTGTTGTTGTGAAATTG+TGG | + | chr7_3:65539858-65539877 | Msa1117250:intron | 35.0% | |
| TCAAGATTCTCATAGCACAA+AGG | - | chr7_3:65540168-65540187 | None:intergenic | 35.0% | |
| ACTACTGCATTGTTAACCTT+GGG | - | chr7_3:65540207-65540226 | None:intergenic | 35.0% | |
| AACTACTGCATTGTTAACCT+TGG | - | chr7_3:65540208-65540227 | None:intergenic | 35.0% | |
| !! | GATCATTTTGAGGACATAAC+TGG | + | chr7_3:65540352-65540371 | Msa1117250:intron | 35.0% |
| TGATAAGGAAATGATATGGC+TGG | - | chr7_3:65540407-65540426 | None:intergenic | 35.0% | |
| AACAAAGCCTAAGCATGATA+AGG | - | chr7_3:65540422-65540441 | None:intergenic | 35.0% | |
| !! | TATCATGCTTAGGCTTTGTT+TGG | + | chr7_3:65540422-65540441 | Msa1117250:intron | 35.0% |
| !! | ATCATGCTTAGGCTTTGTTT+GGG | + | chr7_3:65540423-65540442 | Msa1117250:intron | 35.0% |
| GAACTCAAAAATTGCATTGG+GGG | - | chr7_3:65540661-65540680 | None:intergenic | 35.0% | |
| GGAACTCAAAAATTGCATTG+GGG | - | chr7_3:65540662-65540681 | None:intergenic | 35.0% | |
| GGGAACTCAAAAATTGCATT+GGG | - | chr7_3:65540663-65540682 | None:intergenic | 35.0% | |
| TAAAAAATCCCCCTCATTTG+GGG | - | chr7_3:65540684-65540703 | None:intergenic | 35.0% | |
| AAGAAATAGAAGACATTGGG+AGG | - | chr7_3:65540740-65540759 | None:intergenic | 35.0% | |
| GTGGAAGAAATAGAAGACAT+TGG | - | chr7_3:65540744-65540763 | None:intergenic | 35.0% | |
| !! | GAAAGGTTAAGGCTTTGTTT+GGG | - | chr7_3:65540816-65540835 | None:intergenic | 35.0% |
| ! | TGTTTTACAGGGAAAGGTTA+AGG | - | chr7_3:65540827-65540846 | None:intergenic | 35.0% |
| ! | TCTTTCTGTTTTACAGGGAA+AGG | - | chr7_3:65540833-65540852 | None:intergenic | 35.0% |
| ! | ATAACAAACGGGCTCTTAAA+TGG | - | chr7_3:65541124-65541143 | None:intergenic | 35.0% |
| ACTTCAAATGAGAAGCTGTT+AGG | + | chr7_3:65541240-65541259 | Msa1117250:intron | 35.0% | |
| ! | TCTTGGATTTTGTCAACCAT+CGG | + | chr7_3:65541633-65541652 | Msa1117250:CDS | 35.0% |
| AGTCAGAAAAGCTATTGTAG+AGG | + | chr7_3:65541663-65541682 | Msa1117250:CDS | 35.0% | |
| TTCCAACAATTTCCAGATCA+AGG | - | chr7_3:65541968-65541987 | None:intergenic | 35.0% | |
| ATCCATGTCAGAGCTTAAAA+GGG | - | chr7_3:65542115-65542134 | None:intergenic | 35.0% | |
| TATCCATGTCAGAGCTTAAA+AGG | - | chr7_3:65542116-65542135 | None:intergenic | 35.0% | |
| AAAACAAACGCTCAATCAAG+TGG | - | chr7_3:65542401-65542420 | None:intergenic | 35.0% | |
| AGGACAATTGTTTACTAGCT+CGG | - | chr7_3:65542549-65542568 | None:intergenic | 35.0% | |
| CTAACTTCTTTATCTCTTCG+AGG | + | chr7_3:65542572-65542591 | Msa1117250:CDS | 35.0% | |
| GTACACAATGCAAAAACTGT+TGG | - | chr7_3:65542677-65542696 | None:intergenic | 35.0% | |
| TTAGAAACAAGTCCCACATT+TGG | + | chr7_3:65542738-65542757 | Msa1117250:intron | 35.0% | |
| CTTCTCTATTCTACCAAATG+TGG | - | chr7_3:65542754-65542773 | None:intergenic | 35.0% | |
| CACATTTGGTAGAATAGAGA+AGG | + | chr7_3:65542752-65542771 | Msa1117250:intron | 35.0% | |
| GAGATCTAGTATCCATTTGT+TGG | + | chr7_3:65542797-65542816 | Msa1117250:intron | 35.0% | |
| !! | TGGTTCAAATTTTTGGACCA+TGG | + | chr7_3:65542817-65542836 | Msa1117250:intron | 35.0% |
| ! | ATTTTATTGTATGGGCCAGT+TGG | - | chr7_3:65542885-65542904 | None:intergenic | 35.0% |
| AACTCCCAAGATTAACATGT+TGG | - | chr7_3:65542909-65542928 | None:intergenic | 35.0% | |
| ! | ATTTGTTGAAATAGACCCTC+TGG | + | chr7_3:65542945-65542964 | Msa1117250:intron | 35.0% |
| TTCTACGAAACAACTCTCTA+CGG | + | chr7_3:65543109-65543128 | Msa1117250:intron | 35.0% | |
| TTACTTATATTCGAAGCTGG+AGG | + | chr7_3:65543220-65543239 | Msa1117250:intron | 35.0% | |
| TACTTATATTCGAAGCTGGA+GGG | + | chr7_3:65543221-65543240 | Msa1117250:intron | 35.0% | |
| CATCAACATCGTATATTGGT+GGG | - | chr7_3:65543257-65543276 | None:intergenic | 35.0% | |
| ACATCAACATCGTATATTGG+TGG | - | chr7_3:65543258-65543277 | None:intergenic | 35.0% | |
| AGCTATGTATGCACTCAATT+TGG | + | chr7_3:65543360-65543379 | Msa1117250:intron | 35.0% | |
| AAATTGCCTCAAGCCAAATT+AGG | + | chr7_3:65543518-65543537 | Msa1117250:intron | 35.0% | |
| ! | CTTTGGTTCAAATGAGGAAA+GGG | - | chr7_3:65543570-65543589 | None:intergenic | 35.0% |
| ! | TCTTTGGTTCAAATGAGGAA+AGG | - | chr7_3:65543571-65543590 | None:intergenic | 35.0% |
| ! | GATACTCTTTGGTTCAAATG+AGG | - | chr7_3:65543576-65543595 | None:intergenic | 35.0% |
| !! | TTTGAACCAAAGAGTATCAG+AGG | + | chr7_3:65543578-65543597 | Msa1117250:intron | 35.0% |
| ATTTGCATTTGCAGGGATTT+CGG | + | chr7_3:65543766-65543785 | Msa1117250:intron | 35.0% | |
| CAATCACAGGAAGTTTCTTA+AGG | + | chr7_3:65543823-65543842 | Msa1117250:CDS | 35.0% | |
| ! | TCCTCGAGGTCTTAATTTTA+AGG | + | chr7_3:65543970-65543989 | Msa1117250:CDS | 35.0% |
| ! | CCTCGAGGTCTTAATTTTAA+GGG | + | chr7_3:65543971-65543990 | Msa1117250:CDS | 35.0% |
| GTGGGGTTATAATAGATTTC+TGG | + | chr7_3:65544014-65544033 | Msa1117250:intron | 35.0% | |
| ! | GGGTTATAATAGATTTCTGG+TGG | + | chr7_3:65544017-65544036 | Msa1117250:intron | 35.0% |
| ! | TAGCATTTCAGAGACAGTTT+TGG | - | chr7_3:65544059-65544078 | None:intergenic | 35.0% |
| !! | TTGTTGATAGCGATTCTTGA+AGG | + | chr7_3:65544109-65544128 | Msa1117250:CDS | 35.0% |
| TTAAACATCTTGTGGGTACA+TGG | + | chr7_3:65544146-65544165 | Msa1117250:intron | 35.0% | |
| CAGTATTATGCCTATAAAGC+AGG | + | chr7_3:65544397-65544416 | Msa1117250:intron | 35.0% | |
| ! | TATGCCTATAAAGCAGGTTT+TGG | + | chr7_3:65544403-65544422 | Msa1117250:CDS | 35.0% |
| ATATCTAACCTTCCTTCTGA+TGG | - | chr7_3:65544464-65544483 | None:intergenic | 35.0% | |
| TATTCTTTCGAATAGGGTCA+AGG | + | chr7_3:65544481-65544500 | Msa1117250:intron | 35.0% | |
| ATTCTTTCGAATAGGGTCAA+GGG | + | chr7_3:65544482-65544501 | Msa1117250:intron | 35.0% | |
| CGACATTGAAAATTGGTTAC+AGG | - | chr7_3:65544770-65544789 | None:intergenic | 35.0% | |
| GGACAATAATCTAGTGAAGT+TGG | + | chr7_3:65544804-65544823 | Msa1117250:three_prime_UTR | 35.0% | |
| AAATAGATATATGGTGCCCT+TGG | + | chr7_3:65544885-65544904 | Msa1117250:intron | 35.0% | |
| AATAGATATATGGTGCCCTT+GGG | + | chr7_3:65544886-65544905 | Msa1117250:intron | 35.0% | |
| ! | GCTTTTGTAGATGATTGTGA+AGG | + | chr7_3:65544925-65544944 | Msa1117250:intron | 35.0% |
| ATTGTGAAGGAATAGATGCA+TGG | + | chr7_3:65544938-65544957 | Msa1117250:intron | 35.0% | |
| ATGGTTGACATGTGACAAAT+AGG | + | chr7_3:65544985-65545004 | Msa1117250:intron | 35.0% | |
| AATGATGAACTCAAGAGAGT+CGG | - | chr7_3:65545304-65545323 | None:intergenic | 35.0% | |
| ! | AAAATCCACCTCTCTTTTAG+GGG | - | chr7_3:65545406-65545425 | None:intergenic | 35.0% |
| ! | GAAAATCCACCTCTCTTTTA+GGG | - | chr7_3:65545407-65545426 | None:intergenic | 35.0% |
| ! | TGAAAATCCACCTCTCTTTT+AGG | - | chr7_3:65545408-65545427 | None:intergenic | 35.0% |
| !! | AGGTGGATTTTCATATAACG+CGG | + | chr7_3:65545415-65545434 | Msa1117250:three_prime_UTR | 35.0% |
| AATAGACAGCTAGTGTCAAA+GGG | - | chr7_3:65545504-65545523 | None:intergenic | 35.0% | |
| AAATAGACAGCTAGTGTCAA+AGG | - | chr7_3:65545505-65545524 | None:intergenic | 35.0% | |
| !! | ATTGATTCGGGGTATGGATA+CGG | + | chr7_3:65539075-65539094 | Msa1117250:exon | 40.0% |
| GAAGATGGAATTGGAATCTC+AGG | - | chr7_3:65539109-65539128 | None:intergenic | 40.0% | |
| TCCATCACAAAACCCTAGAA+TGG | + | chr7_3:65539162-65539181 | Msa1117250:CDS | 40.0% | |
| !!! | TCCATTCTAGGGTTTTGTGA+TGG | - | chr7_3:65539166-65539185 | None:intergenic | 40.0% |
| CATGTTCGACTTCCATTCTA+GGG | - | chr7_3:65539177-65539196 | None:intergenic | 40.0% | |
| ACATGTTCGACTTCCATTCT+AGG | - | chr7_3:65539178-65539197 | None:intergenic | 40.0% | |
| ! | ATTCTCTAAGGAGAGATCGA+TGG | - | chr7_3:65539242-65539261 | None:intergenic | 40.0% |
| AGAATCTGAGAGAACCTTGA+AGG | - | chr7_3:65539410-65539429 | None:intergenic | 40.0% | |
| TGATGGTTGTACTTGTTTGC+CGG | + | chr7_3:65539797-65539816 | Msa1117250:intron | 40.0% | |
| GCTAAAAAATGAGCAAGCAG+CGG | - | chr7_3:65540130-65540149 | None:intergenic | 40.0% | |
| TTTGAGAACACTTGTTCCCA+AGG | + | chr7_3:65540188-65540207 | Msa1117250:CDS | 40.0% | |
| TATGATTCAACGAGCTGGAA+AGG | + | chr7_3:65540233-65540252 | Msa1117250:CDS | 40.0% | |
| GGCACTAAGGTATGAAAGTT+TGG | + | chr7_3:65540254-65540273 | Msa1117250:intron | 40.0% | |
| GCAGTTACTTGAAGTTTCCT+TGG | - | chr7_3:65540326-65540345 | None:intergenic | 40.0% | |
| ! | CTGCACAACTGATCATTTTG+AGG | + | chr7_3:65540342-65540361 | Msa1117250:intron | 40.0% |
| AAGGAAATGATATGGCTGGT+AGG | - | chr7_3:65540403-65540422 | None:intergenic | 40.0% | |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | + | chr7_3:65540430-65540449 | Msa1117250:intron | 40.0% |
| TCAAAAATTGCATTGGGGGA+GGG | - | chr7_3:65540657-65540676 | None:intergenic | 40.0% | |
| GGGGAACTCAAAAATTGCAT+TGG | - | chr7_3:65540664-65540683 | None:intergenic | 40.0% | |
| !!! | TTTTTGAGTTCCCCCAAATG+AGG | + | chr7_3:65540670-65540689 | Msa1117250:intron | 40.0% |
| !!! | TTTTGAGTTCCCCCAAATGA+GGG | + | chr7_3:65540671-65540690 | Msa1117250:intron | 40.0% |
| AAAAAATCCCCCTCATTTGG+GGG | - | chr7_3:65540683-65540702 | None:intergenic | 40.0% | |
| !!! | GAGGGTTTTGGAAAAAAGGA+AGG | - | chr7_3:65540772-65540791 | None:intergenic | 40.0% |
| !! | GGAAAGGTTAAGGCTTTGTT+TGG | - | chr7_3:65540817-65540836 | None:intergenic | 40.0% |
| GGAGAAAATCATTGCAGATG+AGG | - | chr7_3:65540909-65540928 | None:intergenic | 40.0% | |
| AAGCGCCAACAAAGTTTACA+GGG | - | chr7_3:65541041-65541060 | None:intergenic | 40.0% | |
| ! | AAAGCGCCAACAAAGTTTAC+AGG | - | chr7_3:65541042-65541061 | None:intergenic | 40.0% |
| GATGGTTGACAAAATCCAAG+AGG | - | chr7_3:65541634-65541653 | None:intergenic | 40.0% | |
| TTTCTGACTGTAGAAACCGA+TGG | - | chr7_3:65541652-65541671 | None:intergenic | 40.0% | |
| !! | TAGAGGTGCCTAACTATTCA+TGG | + | chr7_3:65541680-65541699 | Msa1117250:CDS | 40.0% |
| AATGATAAGAGGTCTCGTCA+AGG | + | chr7_3:65541703-65541722 | Msa1117250:CDS | 40.0% | |
| ATGATAAGAGGTCTCGTCAA+GGG | + | chr7_3:65541704-65541723 | Msa1117250:CDS | 40.0% | |
| ! | TGCTGTTTAAGCCCTTTAAG+TGG | + | chr7_3:65541751-65541770 | Msa1117250:CDS | 40.0% |
| GCTGTTTAAGCCCTTTAAGT+GGG | + | chr7_3:65541752-65541771 | Msa1117250:CDS | 40.0% | |
| CTGTTTAAGCCCTTTAAGTG+GGG | + | chr7_3:65541753-65541772 | Msa1117250:CDS | 40.0% | |
| TTTCCAGATCAAGGAGAGAA+GGG | - | chr7_3:65541959-65541978 | None:intergenic | 40.0% | |
| ATTTCCAGATCAAGGAGAGA+AGG | - | chr7_3:65541960-65541979 | None:intergenic | 40.0% | |
| CTCCTTGATCTGGAAATTGT+TGG | + | chr7_3:65541963-65541982 | Msa1117250:CDS | 40.0% | |
| GTTCATAAGCAACTAGCAGT+GGG | - | chr7_3:65542054-65542073 | None:intergenic | 40.0% | |
| AGTTCATAAGCAACTAGCAG+TGG | - | chr7_3:65542055-65542074 | None:intergenic | 40.0% | |
| TGTCAGAGCTTAAAAGGGAA+AGG | - | chr7_3:65542110-65542129 | None:intergenic | 40.0% | |
| !! | TTCCCTTTTAAGCTCTGACA+TGG | + | chr7_3:65542110-65542129 | Msa1117250:intron | 40.0% |
| ! | ATGAACTAGCAGAAAGCATG+AGG | - | chr7_3:65542266-65542285 | None:intergenic | 40.0% |
| !!! | TTTTTCGAGTCTTCGAGAAC+AGG | + | chr7_3:65542417-65542436 | Msa1117250:CDS | 40.0% |
| ATTGTTTACTAGCTCGGAAC+AGG | - | chr7_3:65542543-65542562 | None:intergenic | 40.0% | |
| !!! | TTTTATGGACTGGGCTTCAA+TGG | - | chr7_3:65542857-65542876 | None:intergenic | 40.0% |
| !! | TTGGTGGAGTTTTATGGACT+GGG | - | chr7_3:65542866-65542885 | None:intergenic | 40.0% |
| ACTTATATTCGAAGCTGGAG+GGG | + | chr7_3:65543222-65543241 | Msa1117250:intron | 40.0% | |
| !! | ATTTGGCTTGAGGCAATTTC+TGG | - | chr7_3:65543517-65543536 | None:intergenic | 40.0% |
| TGCTTTCCTCTGATACTCTT+TGG | - | chr7_3:65543587-65543606 | None:intergenic | 40.0% | |
| AAGAGACGGATAGAATCTGA+AGG | - | chr7_3:65543880-65543899 | None:intergenic | 40.0% | |
| TATCCGTCTCTTGAGATAGT+CGG | + | chr7_3:65543888-65543907 | Msa1117250:intron | 40.0% | |
| CCAAGGTTCCTGAAAAATCA+AGG | - | chr7_3:65543930-65543949 | None:intergenic | 40.0% | |
| !!! | CCTTGATTTTTCAGGAACCT+TGG | + | chr7_3:65543927-65543946 | Msa1117250:intron | 40.0% |
| !!! | TGATTTTTCAGGAACCTTGG+AGG | + | chr7_3:65543930-65543949 | Msa1117250:intron | 40.0% |
| CCCTTAAAATTAAGACCTCG+AGG | - | chr7_3:65543974-65543993 | None:intergenic | 40.0% | |
| TCTCACTCTTGCCATTAAAC+AGG | + | chr7_3:65544213-65544232 | Msa1117250:intron | 40.0% | |
| ! | GTTGCTAATTTTTATCGCGC+TGG | + | chr7_3:65544537-65544556 | Msa1117250:intron | 40.0% |
| TCTACAAAAGCTTGTACCCT+AGG | - | chr7_3:65544916-65544935 | None:intergenic | 40.0% | |
| ! | TGACCTTTTGGTGAATGTCA+TGG | + | chr7_3:65544966-65544985 | Msa1117250:intron | 40.0% |
| CAACCATGACATTCACCAAA+AGG | - | chr7_3:65544972-65544991 | None:intergenic | 40.0% | |
| TCACAAGGAAAACAAGCTTC+TGG | - | chr7_3:65545102-65545121 | None:intergenic | 40.0% | |
| CTCTCTTGAGTTCATCATTG+TGG | + | chr7_3:65545305-65545324 | Msa1117250:three_prime_UTR | 40.0% | |
| !! | TCTTATTGGCTCTAATGTGC+AGG | + | chr7_3:65545451-65545470 | Msa1117250:three_prime_UTR | 40.0% |
| !!! | CTAGGGTTTTGTGATGGACA+AGG | - | chr7_3:65539160-65539179 | None:intergenic | 45.0% |
| AGAGGGAGAGAAATTCTTCG+AGG | - | chr7_3:65539201-65539220 | None:intergenic | 45.0% | |
| ATCGATCGCGCTCTCAAAAT+GGG | + | chr7_3:65539295-65539314 | Msa1117250:CDS | 45.0% | |
| ATTATAAGCGCGTTTGCGAG+AGG | - | chr7_3:65539350-65539369 | None:intergenic | 45.0% | |
| GTTGTGAAATTGTGGCGCTA+TGG | + | chr7_3:65539866-65539885 | Msa1117250:intron | 45.0% | |
| TTGACAACAGTGAATAGCGC+TGG | + | chr7_3:65539979-65539998 | Msa1117250:intron | 45.0% | |
| TGACAACAGTGAATAGCGCT+GGG | + | chr7_3:65539980-65539999 | Msa1117250:intron | 45.0% | |
| CTGGGGGAAACTGCTAATTT+AGG | + | chr7_3:65539998-65540017 | Msa1117250:intron | 45.0% | |
| TCCAGCTCGTTGAATCATAG+TGG | - | chr7_3:65540232-65540251 | None:intergenic | 45.0% | |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr7_3:65540434-65540453 | Msa1117250:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr7_3:65540435-65540454 | Msa1117250:intron | 45.0% |
| CTCAAAAATTGCATTGGGGG+AGG | - | chr7_3:65540658-65540677 | None:intergenic | 45.0% | |
| ! | TTTGAGTTCCCCCAAATGAG+GGG | + | chr7_3:65540672-65540691 | Msa1117250:intron | 45.0% |
| TAGAAGACATTGGGAGGAGA+GGG | - | chr7_3:65540734-65540753 | None:intergenic | 45.0% | |
| ATAGAAGACATTGGGAGGAG+AGG | - | chr7_3:65540735-65540754 | None:intergenic | 45.0% | |
| GGAAAAAAGGAAGGAGCAAG+TGG | - | chr7_3:65540763-65540782 | None:intergenic | 45.0% | |
| !!! | AGGGGAGGGTTTTGGAAAAA+AGG | - | chr7_3:65540776-65540795 | None:intergenic | 45.0% |
| !! | TAAGGCTTTGTTTGGGAGCT+TGG | - | chr7_3:65540809-65540828 | None:intergenic | 45.0% |
| ! | CATTCAGGGCCTGTTTGTTA+CGG | - | chr7_3:65541503-65541522 | None:intergenic | 45.0% |
| CAAGAGGACAAGCAGTAACA+GGG | - | chr7_3:65541618-65541637 | None:intergenic | 45.0% | |
| TTAAGCCCTTTAAGTGGGGA+TGG | + | chr7_3:65541757-65541776 | Msa1117250:CDS | 45.0% | |
| AGTCCATGAGAAACATACCC+TGG | - | chr7_3:65541790-65541809 | None:intergenic | 45.0% | |
| CTTCTAGTCATGTTGAGCTG+AGG | + | chr7_3:65542346-65542365 | Msa1117250:intron | 45.0% | |
| GGCTTCAATGGTCAAAGCTT+GGG | - | chr7_3:65542845-65542864 | None:intergenic | 45.0% | |
| !! | GTTGGTGGAGTTTTATGGAC+TGG | - | chr7_3:65542867-65542886 | None:intergenic | 45.0% |
| GTCCATAAAACTCCACCAAC+TGG | + | chr7_3:65542867-65542886 | Msa1117250:intron | 45.0% | |
| TTATTGTATGGGCCAGTTGG+TGG | - | chr7_3:65542882-65542901 | None:intergenic | 45.0% | |
| TACGAAACAACTCTCTACGG+AGG | + | chr7_3:65543112-65543131 | Msa1117250:intron | 45.0% | |
| CTTATATTCGAAGCTGGAGG+GGG | + | chr7_3:65543223-65543242 | Msa1117250:intron | 45.0% | |
| !! | AGTTTGTTGAGGCATCTGTG+AGG | + | chr7_3:65543292-65543311 | Msa1117250:intron | 45.0% |
| ! | GTTTGTTGAGGCATCTGTGA+GGG | + | chr7_3:65543293-65543312 | Msa1117250:intron | 45.0% |
| TGCCTCAAGCCAAATTAGGA+AGG | + | chr7_3:65543522-65543541 | Msa1117250:intron | 45.0% | |
| !! | CTCCTTCCTAATTTGGCTTG+AGG | - | chr7_3:65543527-65543546 | None:intergenic | 45.0% |
| ! | AGAGTATCAGAGGAAAGCAG+TGG | + | chr7_3:65543588-65543607 | Msa1117250:intron | 45.0% |
| GAACCGACTATCTCAAGAGA+CGG | - | chr7_3:65543894-65543913 | None:intergenic | 45.0% | |
| GGATTGCATGCATCTCAAAG+AGG | + | chr7_3:65543992-65544011 | Msa1117250:CDS | 45.0% | |
| TTGCATGCATCTCAAAGAGG+TGG | + | chr7_3:65543995-65544014 | Msa1117250:intron | 45.0% | |
| TGCATGCATCTCAAAGAGGT+GGG | + | chr7_3:65543996-65544015 | Msa1117250:intron | 45.0% | |
| CAGGACATATCCAATAGGGA+AGG | + | chr7_3:65544232-65544251 | Msa1117250:intron | 45.0% | |
| ACATGCTAAGCCTTCCCTAT+TGG | - | chr7_3:65544245-65544264 | None:intergenic | 45.0% | |
| ! | ATCACAGGTGCTACAACTCT+AGG | + | chr7_3:65544278-65544297 | Msa1117250:CDS | 45.0% |
| !! | GCCTATAAAGCAGGTTTTGG+AGG | + | chr7_3:65544406-65544425 | Msa1117250:CDS | 45.0% |
| GCCTCCAAAACCTGCTTTAT+AGG | - | chr7_3:65544410-65544429 | None:intergenic | 45.0% | |
| !!! | TAAAGCAGGTTTTGGAGGCA+AGG | + | chr7_3:65544411-65544430 | Msa1117250:CDS | 45.0% |
| TTTAGCAACCACACGTCAGA+TGG | + | chr7_3:65544627-65544646 | Msa1117250:CDS | 45.0% | |
| AAATCGATCCATCTGACGTG+TGG | - | chr7_3:65544638-65544657 | None:intergenic | 45.0% | |
| TACTACAGCGACCATGTTAG+TGG | + | chr7_3:65544681-65544700 | Msa1117250:CDS | 45.0% | |
| CTTCCTCATTGCCACTAACA+TGG | - | chr7_3:65544695-65544714 | None:intergenic | 45.0% | |
| CATGTTAGTGGCAATGAGGA+AGG | + | chr7_3:65544693-65544712 | Msa1117250:CDS | 45.0% | |
| CAATGAGGAAGGACAAGATG+CGG | + | chr7_3:65544704-65544723 | Msa1117250:CDS | 45.0% | |
| GGACAAGATGCGGTGATTTA+CGG | + | chr7_3:65544714-65544733 | Msa1117250:CDS | 45.0% | |
| GACAAGATGCGGTGATTTAC+GGG | + | chr7_3:65544715-65544734 | Msa1117250:CDS | 45.0% | |
| ACAAGATGCGGTGATTTACG+GGG | + | chr7_3:65544716-65544735 | Msa1117250:CDS | 45.0% | |
| TTACGGGGAAAGTTCAGATG+AGG | + | chr7_3:65544731-65544750 | Msa1117250:CDS | 45.0% | |
| ! | TGCATGGTGTTCTGACCTTT+TGG | + | chr7_3:65544954-65544973 | Msa1117250:intron | 45.0% |
| !! | TCTCTTTTAGGGGTTGGACT+GGG | - | chr7_3:65545396-65545415 | None:intergenic | 45.0% |
| GATGGAGAGAGAAGGACGAT+CGG | - | chr7_3:65539224-65539243 | None:intergenic | 50.0% | |
| GAGAGATCGATGGAGAGAGA+AGG | - | chr7_3:65539232-65539251 | None:intergenic | 50.0% | |
| CATCGATCGCGCTCTCAAAA+TGG | + | chr7_3:65539294-65539313 | Msa1117250:CDS | 50.0% | |
| AGAACCTTGAAGGTGAGGTC+AGG | - | chr7_3:65539400-65539419 | None:intergenic | 50.0% | |
| CTGAGAGAACCTTGAAGGTG+AGG | - | chr7_3:65539405-65539424 | None:intergenic | 50.0% | |
| GACAACAGTGAATAGCGCTG+GGG | + | chr7_3:65539981-65540000 | Msa1117250:intron | 50.0% | |
| ! | ACAACAGTGAATAGCGCTGG+GGG | + | chr7_3:65539982-65540001 | Msa1117250:intron | 50.0% |
| AAGCAGCGGATACAAAGCAC+AGG | - | chr7_3:65540116-65540135 | None:intergenic | 50.0% | |
| GCCACTATGATTCAACGAGC+TGG | + | chr7_3:65540228-65540247 | Msa1117250:CDS | 50.0% | |
| !! | AACGAGCTGGAAAGGCACTA+AGG | + | chr7_3:65540241-65540260 | Msa1117250:CDS | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr7_3:65540433-65540452 | Msa1117250:intron | 50.0% |
| TTTGGGAGTTTGGAGGGGAA+GGG | + | chr7_3:65540440-65540459 | Msa1117250:intron | 50.0% | |
| GGGTTATGGAGGGTTACGAA+GGG | - | chr7_3:65540637-65540656 | None:intergenic | 50.0% | |
| AGGGTTATGGAGGGTTACGA+AGG | - | chr7_3:65540638-65540657 | None:intergenic | 50.0% | |
| ATTGCATTGGGGGAGGGTTA+TGG | - | chr7_3:65540651-65540670 | None:intergenic | 50.0% | |
| TTGAGTTCCCCCAAATGAGG+GGG | + | chr7_3:65540673-65540692 | Msa1117250:intron | 50.0% | |
| ! | CTTTGTTTGGGAGCTTGGAG+GGG | - | chr7_3:65540804-65540823 | None:intergenic | 50.0% |
| !! | GCTTTGTTTGGGAGCTTGGA+GGG | - | chr7_3:65540805-65540824 | None:intergenic | 50.0% |
| CCAAGAGGACAAGCAGTAAC+AGG | - | chr7_3:65541619-65541638 | None:intergenic | 50.0% | |
| CCTGTTACTGCTTGTCCTCT+TGG | + | chr7_3:65541616-65541635 | Msa1117250:CDS | 50.0% | |
| CACCACCATCCCCACTTAAA+GGG | - | chr7_3:65541765-65541784 | None:intergenic | 50.0% | |
| GCACCAGGGTATGTTTCTCA+TGG | + | chr7_3:65541784-65541803 | Msa1117250:intron | 50.0% | |
| ! | GCAGAAAGCATGAGGAGACA+GGG | - | chr7_3:65542258-65542277 | None:intergenic | 50.0% |
| ! | AGCAGAAAGCATGAGGAGAC+AGG | - | chr7_3:65542259-65542278 | None:intergenic | 50.0% |
| ! | GGGACGCAAAGTGTCTTCAA+AGG | - | chr7_3:65542469-65542488 | None:intergenic | 50.0% |
| GATGAACTGTGGCAGTGTCT+TGG | + | chr7_3:65542711-65542730 | Msa1117250:intron | 50.0% | |
| TGGTCAAAGCTTGGGATCCA+TGG | - | chr7_3:65542837-65542856 | None:intergenic | 50.0% | |
| GGGCTTCAATGGTCAAAGCT+TGG | - | chr7_3:65542846-65542865 | None:intergenic | 50.0% | |
| !!! | GGCCAGTTGGTGGAGTTTTA+TGG | - | chr7_3:65542872-65542891 | None:intergenic | 50.0% |
| ! | TTGAGGCATCTGTGAGGGAA+AGG | + | chr7_3:65543298-65543317 | Msa1117250:intron | 50.0% |
| ! | CAATGGTGGGAATTTCCTCG+AGG | + | chr7_3:65543956-65543975 | Msa1117250:CDS | 50.0% |
| GCATGCATCTCAAAGAGGTG+GGG | + | chr7_3:65543997-65544016 | Msa1117250:intron | 50.0% | |
| ATGCGCAGATCGAAGTTGCT+AGG | + | chr7_3:65544086-65544105 | Msa1117250:intron | 50.0% | |
| GCTTAGCATGTGAAGCTGAC+TGG | + | chr7_3:65544254-65544273 | Msa1117250:CDS | 50.0% | |
| GTGAAGCTGACTGGTATCAC+AGG | + | chr7_3:65544263-65544282 | Msa1117250:CDS | 50.0% | |
| ! | CGGAGTATCCATCAGAAGGA+AGG | + | chr7_3:65544453-65544472 | Msa1117250:CDS | 50.0% |
| CGACCATGTTAGTGGCAATG+AGG | + | chr7_3:65544689-65544708 | Msa1117250:CDS | 50.0% | |
| TGTACCCTAGGTCAACCCAA+GGG | - | chr7_3:65544904-65544923 | None:intergenic | 50.0% | |
| TTGTACCCTAGGTCAACCCA+AGG | - | chr7_3:65544905-65544924 | None:intergenic | 50.0% | |
| TTATCCACTAGGGGAGCAGT+AGG | + | chr7_3:65545200-65545219 | Msa1117250:intron | 50.0% | |
| TATCCACTAGGGGAGCAGTA+GGG | + | chr7_3:65545201-65545220 | Msa1117250:intron | 50.0% | |
| GTAGGGGAAGAAGGATATGC+CGG | + | chr7_3:65545218-65545237 | Msa1117250:three_prime_UTR | 50.0% | |
| !! | TTTTAGGGGTTGGACTGGGA+TGG | - | chr7_3:65545392-65545411 | None:intergenic | 50.0% |
| !! | CTCTCTTTTAGGGGTTGGAC+TGG | - | chr7_3:65545397-65545416 | None:intergenic | 50.0% |
| CAGTCCAACCCCTAAAAGAG+AGG | + | chr7_3:65545395-65545414 | Msa1117250:three_prime_UTR | 50.0% | |
| TCCAACCCCTAAAAGAGAGG+TGG | + | chr7_3:65545398-65545417 | Msa1117250:three_prime_UTR | 50.0% | |
| !! | TCCACCTCTCTTTTAGGGGT+TGG | - | chr7_3:65545402-65545421 | None:intergenic | 50.0% |
| GAGAGAAGGACGATCGGAGA+GGG | - | chr7_3:65539218-65539237 | None:intergenic | 55.0% | |
| AGAGAGAAGGACGATCGGAG+AGG | - | chr7_3:65539219-65539238 | None:intergenic | 55.0% | |
| !! | TCGATGAGATCGGTGTCAGC+AGG | - | chr7_3:65539280-65539299 | None:intergenic | 55.0% |
| ! | GAGAGCGCGATCGATGAGAT+CGG | - | chr7_3:65539290-65539309 | None:intergenic | 55.0% |
| !! | GCGTTTGCGAGAGGAGTGTT+TGG | - | chr7_3:65539341-65539360 | None:intergenic | 55.0% |
| AAGGTGAGGTCAGGAGGAAG+AGG | - | chr7_3:65539391-65539410 | None:intergenic | 55.0% | |
| TCCTCCTGACCTCACCTTCA+AGG | + | chr7_3:65539393-65539412 | Msa1117250:CDS | 55.0% | |
| ACCTTGAAGGTGAGGTCAGG+AGG | - | chr7_3:65539397-65539416 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+AGG | + | chr7_3:65540439-65540458 | Msa1117250:intron | 55.0% | |
| CATTGGGGGAGGGTTATGGA+GGG | - | chr7_3:65540647-65540666 | None:intergenic | 55.0% | |
| ACATTGGGAGGAGAGGGCTT+TGG | - | chr7_3:65540728-65540747 | None:intergenic | 55.0% | |
| !! | GGCTTTGTTTGGGAGCTTGG+AGG | - | chr7_3:65540806-65540825 | None:intergenic | 55.0% |
| AGCCCTTTAAGTGGGGATGG+TGG | + | chr7_3:65541760-65541779 | Msa1117250:CDS | 55.0% | |
| GCACCACCATCCCCACTTAA+AGG | - | chr7_3:65541766-65541785 | None:intergenic | 55.0% | |
| GTGCCCTTCTCTCCTTGATC+TGG | + | chr7_3:65541953-65541972 | Msa1117250:CDS | 55.0% | |
| AGGAACCTTGGAGGCTGCAA+TGG | + | chr7_3:65543939-65543958 | Msa1117250:intron | 55.0% | |
| AACCTTGGAGGCTGCAATGG+TGG | + | chr7_3:65543942-65543961 | Msa1117250:CDS | 55.0% | |
| ACCTTGGAGGCTGCAATGGT+GGG | + | chr7_3:65543943-65543962 | Msa1117250:CDS | 55.0% | |
| ! | GTGGCGGAGTATCCATCAGA+AGG | + | chr7_3:65544449-65544468 | Msa1117250:CDS | 55.0% |
| ATCCACTAGGGGAGCAGTAG+GGG | + | chr7_3:65545202-65545221 | Msa1117250:intron | 55.0% | |
| AGAAGGATATGCCGGTCACC+AGG | + | chr7_3:65545226-65545245 | Msa1117250:three_prime_UTR | 55.0% | |
| !! | TTGGCGTTGATCCTGGTGAC+CGG | - | chr7_3:65545240-65545259 | None:intergenic | 55.0% |
| ACCAGGATCAACGCCAACTG+CGG | + | chr7_3:65545243-65545262 | Msa1117250:three_prime_UTR | 55.0% | |
| GAAGATCCAAGGTCCGCAGT+TGG | - | chr7_3:65545259-65545278 | None:intergenic | 55.0% | |
| GGAGTTTGGAGGGGAAGGGA+GGG | + | chr7_3:65540444-65540463 | Msa1117250:intron | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | + | chr7_3:65540445-65540464 | Msa1117250:intron | 60.0% | |
| GCATTGGGGGAGGGTTATGG+AGG | - | chr7_3:65540648-65540667 | None:intergenic | 60.0% | |
| ! | TTGGGAGGAGAGGGCTTTGG+AGG | - | chr7_3:65540725-65540744 | None:intergenic | 60.0% |
| TTTGGGAGCTTGGAGGGGAG+GGG | - | chr7_3:65540799-65540818 | None:intergenic | 60.0% | |
| GTTTGGGAGCTTGGAGGGGA+GGG | - | chr7_3:65540800-65540819 | None:intergenic | 60.0% | |
| TGTTTGGGAGCTTGGAGGGG+AGG | - | chr7_3:65540801-65540820 | None:intergenic | 60.0% | |
| TCCCACCATTGCAGCCTCCA+AGG | - | chr7_3:65543947-65543966 | None:intergenic | 60.0% | |
| !!! | CAGGTTTTGGAGGCAAGGCC+TGG | + | chr7_3:65544416-65544435 | Msa1117250:CDS | 60.0% |
| AAGGCCTGGTATGCGTGTGG+TGG | + | chr7_3:65544430-65544449 | Msa1117250:CDS | 60.0% | |
| !! | TGGTGCCCTTGGGTTGACCT+AGG | + | chr7_3:65544896-65544915 | Msa1117250:intron | 60.0% |
| !! | GGTGCCCTTGGGTTGACCTA+GGG | + | chr7_3:65544897-65544916 | Msa1117250:intron | 60.0% |
| TTCCCCTACTGCTCCCCTAG+TGG | - | chr7_3:65545207-65545226 | None:intergenic | 60.0% | |
| AGGGGAGCAGTAGGGGAAGA+AGG | + | chr7_3:65545209-65545228 | Msa1117250:intron | 60.0% | |
| !! | TCCGCAGTTGGCGTTGATCC+TGG | - | chr7_3:65545247-65545266 | None:intergenic | 60.0% |
| TCAACGCCAACTGCGGACCT+TGG | + | chr7_3:65545250-65545269 | Msa1117250:three_prime_UTR | 60.0% | |
| GGGAGTTTGGAGGGGAAGGG+AGG | + | chr7_3:65540443-65540462 | Msa1117250:intron | 65.0% | |
| TTTGGAGGGGAAGGGAGGGG+AGG | + | chr7_3:65540448-65540467 | Msa1117250:intron | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+GGG | + | chr7_3:65540449-65540468 | Msa1117250:intron | 65.0% | |
| GGAAGGGAGGGGAGGGCTTT+GGG | + | chr7_3:65540456-65540475 | Msa1117250:intron | 65.0% | |
| GAAGGGAGGGGAGGGCTTTG+GGG | + | chr7_3:65540457-65540476 | Msa1117250:intron | 65.0% | |
| ! | AAGGGAGGGGAGGGCTTTGG+GGG | + | chr7_3:65540458-65540477 | Msa1117250:intron | 65.0% |
| ! | AGTGGGGATGGTGGTGCACC+AGG | + | chr7_3:65541769-65541788 | Msa1117250:CDS | 65.0% |
| ! | GTGGGGATGGTGGTGCACCA+GGG | + | chr7_3:65541770-65541789 | Msa1117250:CDS | 65.0% |
| GGCAAGGCCTGGTATGCGTG+TGG | + | chr7_3:65544427-65544446 | Msa1117250:CDS | 65.0% | |
| GCCTGGTATGCGTGTGGTGG+CGG | + | chr7_3:65544433-65544452 | Msa1117250:CDS | 65.0% | |
| TCCGCCACCACACGCATACC+AGG | - | chr7_3:65544437-65544456 | None:intergenic | 65.0% | |
| ! | GGGGTTGGACTGGGATGGAG+TGG | - | chr7_3:65545387-65545406 | None:intergenic | 65.0% |
| GGGAAGGGAGGGGAGGGCTT+TGG | + | chr7_3:65540455-65540474 | Msa1117250:intron | 70.0% | |
| !! | AGGGAGGGGAGGGCTTTGGG+GGG | + | chr7_3:65540459-65540478 | Msa1117250:intron | 70.0% |
| !! | AGGGGAGGGCTTTGGGGGGT+TGG | + | chr7_3:65540463-65540482 | Msa1117250:intron | 70.0% |
| ! | GGGAGGGGAGGGGAGGGTTT+TGG | - | chr7_3:65540784-65540803 | None:intergenic | 70.0% |
| TTGGAGGGGAGGGGAGGGGA+GGG | - | chr7_3:65540790-65540809 | None:intergenic | 70.0% | |
| GAGCTTGGAGGGGAGGGGAG+GGG | - | chr7_3:65540794-65540813 | None:intergenic | 70.0% | |
| GGAGCTTGGAGGGGAGGGGA+GGG | - | chr7_3:65540795-65540814 | None:intergenic | 70.0% | |
| CTTGGAGGGGAGGGGAGGGG+AGG | - | chr7_3:65540791-65540810 | None:intergenic | 75.0% | |
| GGGAGCTTGGAGGGGAGGGG+AGG | - | chr7_3:65540796-65540815 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 65538985 | 65545648 | 65538985 | ID=Msa1117250;Name=Msa1117250 |
| chr7_3 | mRNA | 65538985 | 65545648 | 65538985 | ID=Msa1117250-mRNA-1;Parent=Msa1117250;Name=Msa1117250-mRNA-1;_AED=0.11;_eAED=0.11;_QI=103|1|1|1|0.91|0.92|13|490|520 |
| chr7_3 | exon | 65538985 | 65539414 | 65538985 | ID=Msa1117250-mRNA-1:exon:15626;Parent=Msa1117250-mRNA-1 |
| chr7_3 | exon | 65540087 | 65540262 | 65540087 | ID=Msa1117250-mRNA-1:exon:15627;Parent=Msa1117250-mRNA-1 |
| chr7_3 | exon | 65541594 | 65541791 | 65541594 | ID=Msa1117250-mRNA-1:exon:15628;Parent=Msa1117250-mRNA-1 |
| chr7_3 | exon | 65541878 | 65541988 | 65541878 | ID=Msa1117250-mRNA-1:exon:15629;Parent=Msa1117250-mRNA-1 |
| chr7_3 | exon | 65542353 | 65542438 | 65542353 | ID=Msa1117250-mRNA-1:exon:15630;Parent=Msa1117250-mRNA-1 |
| chr7_3 | exon | 65542513 | 65542634 | 65542513 | ID=Msa1117250-mRNA-1:exon:15631;Parent=Msa1117250-mRNA-1 |
| chr7_3 | exon | 65543780 | 65543844 | 65543780 | ID=Msa1117250-mRNA-1:exon:15632;Parent=Msa1117250-mRNA-1 |
| chr7_3 | exon | 65543941 | 65544013 | 65543941 | ID=Msa1117250-mRNA-1:exon:15633;Parent=Msa1117250-mRNA-1 |
| chr7_3 | exon | 65544094 | 65544156 | 65544094 | ID=Msa1117250-mRNA-1:exon:15634;Parent=Msa1117250-mRNA-1 |
| chr7_3 | exon | 65544235 | 65544299 | 65544235 | ID=Msa1117250-mRNA-1:exon:15635;Parent=Msa1117250-mRNA-1 |
| chr7_3 | exon | 65544400 | 65544474 | 65544400 | ID=Msa1117250-mRNA-1:exon:15636;Parent=Msa1117250-mRNA-1 |
| chr7_3 | exon | 65544572 | 65544825 | 65544572 | ID=Msa1117250-mRNA-1:exon:15637;Parent=Msa1117250-mRNA-1 |
| chr7_3 | exon | 65545211 | 65545648 | 65545211 | ID=Msa1117250-mRNA-1:exon:15638;Parent=Msa1117250-mRNA-1 |
| chr7_3 | five_prime_UTR | 65538985 | 65539087 | 65538985 | ID=Msa1117250-mRNA-1:five_prime_utr;Parent=Msa1117250-mRNA-1 |
| chr7_3 | CDS | 65539088 | 65539414 | 65539088 | ID=Msa1117250-mRNA-1:cds;Parent=Msa1117250-mRNA-1 |
| chr7_3 | CDS | 65540087 | 65540262 | 65540087 | ID=Msa1117250-mRNA-1:cds;Parent=Msa1117250-mRNA-1 |
| chr7_3 | CDS | 65541594 | 65541791 | 65541594 | ID=Msa1117250-mRNA-1:cds;Parent=Msa1117250-mRNA-1 |
| chr7_3 | CDS | 65541878 | 65541988 | 65541878 | ID=Msa1117250-mRNA-1:cds;Parent=Msa1117250-mRNA-1 |
| chr7_3 | CDS | 65542353 | 65542438 | 65542353 | ID=Msa1117250-mRNA-1:cds;Parent=Msa1117250-mRNA-1 |
| chr7_3 | CDS | 65542513 | 65542634 | 65542513 | ID=Msa1117250-mRNA-1:cds;Parent=Msa1117250-mRNA-1 |
| chr7_3 | CDS | 65543780 | 65543844 | 65543780 | ID=Msa1117250-mRNA-1:cds;Parent=Msa1117250-mRNA-1 |
| chr7_3 | CDS | 65543941 | 65544013 | 65543941 | ID=Msa1117250-mRNA-1:cds;Parent=Msa1117250-mRNA-1 |
| chr7_3 | CDS | 65544094 | 65544156 | 65544094 | ID=Msa1117250-mRNA-1:cds;Parent=Msa1117250-mRNA-1 |
| chr7_3 | CDS | 65544235 | 65544299 | 65544235 | ID=Msa1117250-mRNA-1:cds;Parent=Msa1117250-mRNA-1 |
| chr7_3 | CDS | 65544400 | 65544474 | 65544400 | ID=Msa1117250-mRNA-1:cds;Parent=Msa1117250-mRNA-1 |
| chr7_3 | CDS | 65544572 | 65544773 | 65544572 | ID=Msa1117250-mRNA-1:cds;Parent=Msa1117250-mRNA-1 |
| chr7_3 | three_prime_UTR | 65544774 | 65544825 | 65544774 | ID=Msa1117250-mRNA-1:three_prime_utr;Parent=Msa1117250-mRNA-1 |
| chr7_3 | three_prime_UTR | 65545211 | 65545648 | 65545211 | ID=Msa1117250-mRNA-1:three_prime_utr;Parent=Msa1117250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
