Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076090 | sp|Q9SY03|FB219_ARATH | 39.121 | 455 | 224 | 8 | 9 | 448 | 12 | 428 | 1.05e-84 | 274 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076090 | A0A396H436 | 98.656 | 521 | 5 | 1 | 1 | 519 | 1 | 521 | 0.0 | 1052 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0740640 | Msa1076090 | 0.807246 | 5.549997e-50 | -8.615850e-47 |
| Msa1076090 | Msa1117250 | 0.880239 | 6.462952e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076090 | MtrunA17_Chr7g0259911 | 98.656 | 521 | 5 | 1 | 1 | 519 | 1 | 521 | 0.0 | 1052 |
| Msa1076090 | MtrunA17_Chr8g0359461 | 64.167 | 120 | 4 | 2 | 360 | 452 | 1 | 108 | 3.99e-41 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076090 | AT4G02760.2 | 39.121 | 455 | 224 | 8 | 9 | 448 | 12 | 428 | 1.06e-85 | 274 |
| Msa1076090 | AT4G02760.6 | 38.562 | 459 | 226 | 8 | 9 | 448 | 12 | 433 | 4.66e-85 | 271 |
| Msa1076090 | AT4G02760.1 | 38.562 | 459 | 226 | 8 | 9 | 448 | 12 | 433 | 4.66e-85 | 271 |
| Msa1076090 | AT4G02760.4 | 38.562 | 459 | 226 | 8 | 9 | 448 | 12 | 433 | 4.66e-85 | 271 |
| Msa1076090 | AT4G02760.8 | 38.562 | 459 | 226 | 8 | 9 | 448 | 12 | 433 | 4.66e-85 | 271 |
| Msa1076090 | AT4G02760.9 | 38.562 | 459 | 226 | 8 | 9 | 448 | 12 | 433 | 4.66e-85 | 271 |
| Msa1076090 | AT4G02760.5 | 38.562 | 459 | 226 | 8 | 9 | 448 | 12 | 433 | 4.66e-85 | 271 |
| Msa1076090 | AT4G02760.7 | 38.562 | 459 | 226 | 8 | 9 | 448 | 12 | 433 | 4.99e-84 | 271 |
| Msa1076090 | AT4G02760.3 | 38.562 | 459 | 226 | 8 | 9 | 448 | 12 | 433 | 4.99e-84 | 271 |
| Msa1076090 | AT4G02740.1 | 38.661 | 463 | 234 | 10 | 12 | 461 | 4 | 429 | 1.22e-83 | 268 |
| Msa1076090 | AT4G02740.2 | 38.661 | 463 | 234 | 10 | 12 | 461 | 41 | 466 | 4.56e-83 | 267 |
| Msa1076090 | AT4G08535.1 | 39.236 | 288 | 150 | 5 | 112 | 392 | 1 | 270 | 9.50e-50 | 173 |
| Msa1076090 | AT4G02733.1 | 40.310 | 258 | 132 | 6 | 51 | 300 | 45 | 288 | 7.20e-45 | 160 |
| Msa1076090 | AT4G08535.2 | 38.722 | 266 | 138 | 5 | 134 | 392 | 2 | 249 | 1.84e-43 | 155 |
| Msa1076090 | AT4G02735.1 | 29.104 | 402 | 167 | 9 | 32 | 410 | 33 | 339 | 2.09e-37 | 142 |
| Msa1076090 | AT4G08535.3 | 36.325 | 234 | 124 | 5 | 112 | 338 | 1 | 216 | 7.09e-31 | 121 |
Find 145 sgRNAs with CRISPR-Local
Find 481 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCGATCGCGCTCTCAAAA+TGG | 0.178457 | 7_2:+74497353 | Msa1076090:CDS |
| CACAAAATTTCCTCGTTATA+TGG | 0.197993 | 7_2:-74504066 | None:intergenic |
| GCCTCCAAAACCTGCTTTAT+AGG | 0.199316 | 7_2:-74503049 | None:intergenic |
| GCACCACCATCCCCACTTAA+AGG | 0.231839 | 7_2:-74500405 | None:intergenic |
| TTAATGGCGACATTGAAAAT+TGG | 0.263402 | 7_2:-74503416 | None:intergenic |
| CCATATACATTCTGCAAATA+TGG | 0.269568 | 7_2:-74504001 | None:intergenic |
| CCATATTTGCAGAATGTATA+TGG | 0.272736 | 7_2:+74504001 | Msa1076090:three_prime_UTR |
| TAATAATAATGTATTGATTC+GGG | 0.274849 | 7_2:+74497125 | Msa1076090:five_prime_UTR |
| CGACATTGAAAATTGGTTAC+AGG | 0.281324 | 7_2:-74503409 | None:intergenic |
| CCTGTTACTGCTTGTCCTCT+TGG | 0.285440 | 7_2:+74500258 | Msa1076090:CDS |
| TATGCCTATAAAGCAGGTTT+TGG | 0.288911 | 7_2:+74503045 | Msa1076090:CDS |
| ACATGTTCGACTTCCATTCT+AGG | 0.295669 | 7_2:-74497234 | None:intergenic |
| ATTTGCATTTGCAGGGATTT+CGG | 0.306302 | 7_2:+74502408 | Msa1076090:intron |
| ACATGCTAAGCCTTCCCTAT+TGG | 0.311650 | 7_2:-74502884 | None:intergenic |
| TCCTCCTGACCTCACCTTCA+AGG | 0.313422 | 7_2:+74497452 | Msa1076090:CDS |
| ATAATCATAATTCAATTGTT+TGG | 0.335769 | 7_2:+74497424 | Msa1076090:CDS |
| CCAAGAGGACAAGCAGTAAC+AGG | 0.340204 | 7_2:-74500258 | None:intergenic |
| TAAAGTTCGTATACTGGTTA+AGG | 0.346097 | 7_2:+74501255 | Msa1076090:CDS |
| GACAAGATGCGGTGATTTAC+GGG | 0.350617 | 7_2:+74503357 | Msa1076090:CDS |
| CTCCTTGATCTGGAAATTGT+TGG | 0.353311 | 7_2:+74500605 | Msa1076090:CDS |
| GGACAAGATGCGGTGATTTA+CGG | 0.361607 | 7_2:+74503356 | Msa1076090:CDS |
| GAAGAAGAAGAAGATGGAAT+TGG | 0.367942 | 7_2:-74497177 | None:intergenic |
| ATAATAATAATGTATTGATT+CGG | 0.372347 | 7_2:+74497124 | Msa1076090:five_prime_UTR |
| ATCTTCTTCTTCTTCATCAA+TGG | 0.372460 | 7_2:+74497185 | Msa1076090:CDS |
| CAATCACAGGAAGTTTCTTA+AGG | 0.375965 | 7_2:+74502465 | Msa1076090:CDS |
| TGATTGTAAAGTTCGTATAC+TGG | 0.377222 | 7_2:+74501249 | Msa1076090:CDS |
| ATCGATCGCGCTCTCAAAAT+GGG | 0.390635 | 7_2:+74497354 | Msa1076090:CDS |
| TTATCATTCCATGAATAGTT+AGG | 0.393527 | 7_2:-74500330 | None:intergenic |
| TAATGTATTGATTCGGGGTA+TGG | 0.399226 | 7_2:+74497131 | Msa1076090:exon |
| TAGAGGCGCCTAACTATTCA+TGG | 0.413652 | 7_2:+74500322 | Msa1076090:CDS |
| GAAGATGGAATTGGAATCTC+AGG | 0.417083 | 7_2:-74497168 | None:intergenic |
| AGTGGGGATGGTGGTGCACC+AGG | 0.423655 | 7_2:+74500411 | Msa1076090:CDS |
| AATGTCGCCATTAATTGAAA+AGG | 0.424590 | 7_2:+74503425 | Msa1076090:three_prime_UTR |
| TTAAACAGGACATATCCAAT+AGG | 0.424849 | 7_2:+74502869 | Msa1076090:intron |
| CTAACTTCTTTATCTCTTCG+AGG | 0.427099 | 7_2:+74501214 | Msa1076090:CDS |
| ATTGTTTACTAGCTCGGAAC+AGG | 0.428334 | 7_2:-74501182 | None:intergenic |
| CCTTTACAATATTGAGAGAA+TGG | 0.435585 | 7_2:+74500541 | Msa1076090:CDS |
| TGATTGAAGAAGATTCTCTA+AGG | 0.437839 | 7_2:-74497310 | None:intergenic |
| CACCACCATCCCCACTTAAA+GGG | 0.440950 | 7_2:-74500404 | None:intergenic |
| TTCCAACAATTTCCAGATCA+AGG | 0.442939 | 7_2:-74500607 | None:intergenic |
| AGGGGAGCAGTAGGGGAAGA+AGG | 0.451067 | 7_2:+74503849 | Msa1076090:intron |
| GCCTGGTATGCGTGTGGTGG+CGG | 0.454462 | 7_2:+74503075 | Msa1076090:CDS |
| AACTACTGCATTGTTAACCT+TGG | 0.462943 | 7_2:-74498262 | None:intergenic |
| GGACAATAATCTAGTGAAGT+TGG | 0.463367 | 7_2:+74503446 | Msa1076090:three_prime_UTR |
| ACTACTGCATTGTTAACCTT+GGG | 0.465125 | 7_2:-74498261 | None:intergenic |
| CAGTATTATGCCTATAAAGC+AGG | 0.469910 | 7_2:+74503039 | Msa1076090:intron |
| TCCGCAGTTGGCGTTGATCC+TGG | 0.470428 | 7_2:-74503884 | None:intergenic |
| TACTACAGCGACCATGTTAG+TGG | 0.471907 | 7_2:+74503323 | Msa1076090:CDS |
| GTGCCCTTCTCTCCTTGATC+TGG | 0.474698 | 7_2:+74500595 | Msa1076090:CDS |
| TTAATAAGGTCTATTAAACT+TGG | 0.478191 | 7_2:+74500228 | Msa1076090:intron |
| CATGTTCGACTTCCATTCTA+GGG | 0.484619 | 7_2:-74497233 | None:intergenic |
| AGGACAATTGTTTACTAGCT+CGG | 0.488474 | 7_2:-74501188 | None:intergenic |
| TAAACAGGACATATCCAATA+GGG | 0.490183 | 7_2:+74502870 | Msa1076090:intron |
| GCGTTTGCGAGAGGAGTGTT+TGG | 0.490991 | 7_2:-74497397 | None:intergenic |
| AACCTTGGAGGCTGCAATGG+TGG | 0.491012 | 7_2:+74502584 | Msa1076090:CDS |
| ATTGATTCGGGGTATGGATA+CGG | 0.492399 | 7_2:+74497137 | Msa1076090:exon |
| TTGGCGTTGATCCTGGTGAC+CGG | 0.492764 | 7_2:-74503877 | None:intergenic |
| TCCATCACAAAACCCTAGAA+TGG | 0.493841 | 7_2:+74497221 | Msa1076090:CDS |
| ACTATTCATGGAATGATAAG+AGG | 0.495965 | 7_2:+74500334 | Msa1076090:CDS |
| TCAACGCCAACTGCGGACCT+TGG | 0.499744 | 7_2:+74503890 | Msa1076090:three_prime_UTR |
| AGAACCTTGAAGGTGAGGTC+AGG | 0.501213 | 7_2:-74497456 | None:intergenic |
| AAGGTGAGGTCAGGAGGAAG+AGG | 0.502601 | 7_2:-74497447 | None:intergenic |
| CTCTCTTGAGTTCATCATTG+TGG | 0.502856 | 7_2:+74503945 | Msa1076090:three_prime_UTR |
| ATATCTAACCTTCCTTCTGA+TGG | 0.503752 | 7_2:-74503103 | None:intergenic |
| CCATTCTCTCAATATTGTAA+AGG | 0.506658 | 7_2:-74500541 | None:intergenic |
| GCTTAGCATGTGAAGCTGAC+TGG | 0.507952 | 7_2:+74502896 | Msa1076090:CDS |
| TTGTTGATAGCGATTCTTGA+AGG | 0.508373 | 7_2:+74502751 | Msa1076090:CDS |
| GGGGTTGGACTGGGATGGAG+TGG | 0.508979 | 7_2:-74504024 | None:intergenic |
| AGGAACCTTGGAGGCTGCAA+TGG | 0.512358 | 7_2:+74502581 | Msa1076090:intron |
| TTAAGCCCTTTAAGTGGGGA+TGG | 0.512787 | 7_2:+74500399 | Msa1076090:CDS |
| ACCTTGGAGGCTGCAATGGT+GGG | 0.514057 | 7_2:+74502585 | Msa1076090:CDS |
| TAACTTCTTTATCTCTTCGA+GGG | 0.515520 | 7_2:+74501215 | Msa1076090:CDS |
| TCTTATTGGCTCTAATGTGC+AGG | 0.515614 | 7_2:+74504092 | Msa1076090:three_prime_UTR |
| TGCTGTTTAAGCCCTTTAAG+TGG | 0.515758 | 7_2:+74500393 | Msa1076090:CDS |
| TCCAGCTCGTTGAATCATAG+TGG | 0.517832 | 7_2:-74498286 | None:intergenic |
| AAATAGACAGCTAGTGTCAA+AGG | 0.519129 | 7_2:-74504143 | None:intergenic |
| TCATCATCATATTCAATCAC+AGG | 0.520643 | 7_2:+74502452 | Msa1076090:CDS |
| ATTGATGAAGAAGAAGAAGA+TGG | 0.520938 | 7_2:-74497183 | None:intergenic |
| AGAATCTGAGAGAACCTTGA+AGG | 0.527773 | 7_2:-74497466 | None:intergenic |
| AGAAGGATATGCCGGTCACC+AGG | 0.532158 | 7_2:+74503866 | Msa1076090:three_prime_UTR |
| ATCCACTAGGGGAGCAGTAG+GGG | 0.534418 | 7_2:+74503842 | Msa1076090:intron |
| TTTAGCAACCACACGTCAGA+TGG | 0.539699 | 7_2:+74503269 | Msa1076090:CDS |
| TCCCACCATTGCAGCCTCCA+AGG | 0.539878 | 7_2:-74502586 | None:intergenic |
| CTTCCTCATTGCCACTAACA+TGG | 0.543836 | 7_2:-74503334 | None:intergenic |
| TCGATGAGATCGGTGTCAGC+AGG | 0.545296 | 7_2:-74497336 | None:intergenic |
| ACCTTGAAGGTGAGGTCAGG+AGG | 0.545718 | 7_2:-74497453 | None:intergenic |
| GCCACTATGATTCAACGAGC+TGG | 0.546622 | 7_2:+74498285 | Msa1076090:CDS |
| ATGCGCAGATCGAAGTTGCT+AGG | 0.547186 | 7_2:+74502728 | Msa1076090:intron |
| TATCCACTAGGGGAGCAGTA+GGG | 0.547501 | 7_2:+74503841 | Msa1076090:intron |
| TTATCCACTAGGGGAGCAGT+AGG | 0.550223 | 7_2:+74503840 | Msa1076090:intron |
| TTTGAGAACACTTGTTCCCA+AGG | 0.550522 | 7_2:+74498245 | Msa1076090:CDS |
| ATGATCGCATGATCAAAACT+TGG | 0.550522 | 7_2:-74504272 | None:intergenic |
| GCTGTTTAAGCCCTTTAAGT+GGG | 0.563261 | 7_2:+74500394 | Msa1076090:CDS |
| AATAGACAGCTAGTGTCAAA+GGG | 0.564218 | 7_2:-74504142 | None:intergenic |
| TATGATTCAACGAGCTGGAA+AGG | 0.564442 | 7_2:+74498290 | Msa1076090:CDS |
| GAGAGAAGGACGATCGGAGA+GGG | 0.565531 | 7_2:-74497274 | None:intergenic |
| ATTTCCAGATCAAGGAGAGA+AGG | 0.567819 | 7_2:-74500599 | None:intergenic |
| CATGTTAGTGGCAATGAGGA+AGG | 0.570563 | 7_2:+74503335 | Msa1076090:CDS |
| AACGAGCTGGAAAGGCACTA+AGG | 0.570675 | 7_2:+74498298 | Msa1076090:CDS |
| AGCCCTTTAAGTGGGGATGG+TGG | 0.573480 | 7_2:+74500402 | Msa1076090:CDS |
| ATTATAAGCGCGTTTGCGAG+AGG | 0.574554 | 7_2:-74497406 | None:intergenic |
| CTGTTTAAGCCCTTTAAGTG+GGG | 0.579312 | 7_2:+74500395 | Msa1076090:CDS |
| ATTAAAGTTGAGAAGATCCA+AGG | 0.584473 | 7_2:-74503907 | None:intergenic |
| ATCACAGGTGCTACAACTCT+AGG | 0.586080 | 7_2:+74502920 | Msa1076090:CDS |
| AAGCAGCGGATACAAAGCAC+AGG | 0.586758 | 7_2:-74498170 | None:intergenic |
| TTTCCAGATCAAGGAGAGAA+GGG | 0.588022 | 7_2:-74500598 | None:intergenic |
| AAGGCCTGGTATGCGTGTGG+TGG | 0.594456 | 7_2:+74503072 | Msa1076090:CDS |
| CTGAGAGAACCTTGAAGGTG+AGG | 0.594574 | 7_2:-74497461 | None:intergenic |
| CGGAGTATCCATCAGAAGGA+AGG | 0.602557 | 7_2:+74503095 | Msa1076090:CDS |
| ATGATAAGAGGTCTCGTCAA+GGG | 0.604431 | 7_2:+74500346 | Msa1076090:CDS |
| AAAACAAACGCTCAATCAAG+TGG | 0.605290 | 7_2:-74501040 | None:intergenic |
| GTAGGGGAAGAAGGATATGC+CGG | 0.606894 | 7_2:+74503858 | Msa1076090:three_prime_UTR |
| GTGAAGCTGACTGGTATCAC+AGG | 0.611859 | 7_2:+74502905 | Msa1076090:CDS |
| ATTCTCTAAGGAGAGATCGA+TGG | 0.611987 | 7_2:-74497298 | None:intergenic |
| GAGAGCGCGATCGATGAGAT+CGG | 0.612038 | 7_2:-74497346 | None:intergenic |
| GTGGGGATGGTGGTGCACCA+GGG | 0.612058 | 7_2:+74500412 | Msa1076090:CDS |
| AGAGATAAAGAAGTTAGATG+AGG | 0.613288 | 7_2:-74501208 | None:intergenic |
| GTGGCGGAGTATCCATCAGA+AGG | 0.617393 | 7_2:+74503091 | Msa1076090:CDS |
| TCCAACCCCTAAAAGAGAGG+TGG | 0.617422 | 7_2:+74504038 | Msa1076090:three_prime_UTR |
| GGCAAGGCCTGGTATGCGTG+TGG | 0.617823 | 7_2:+74503069 | Msa1076090:CDS |
| ACCAGGATCAACGCCAACTG+CGG | 0.620844 | 7_2:+74503883 | Msa1076090:three_prime_UTR |
| CGACCATGTTAGTGGCAATG+AGG | 0.621373 | 7_2:+74503331 | Msa1076090:CDS |
| TTACGGGGAAAGTTCAGATG+AGG | 0.621590 | 7_2:+74503373 | Msa1076090:CDS |
| GATGGAGAGAGAAGGACGAT+CGG | 0.623334 | 7_2:-74497280 | None:intergenic |
| TTTCTGACTGTAGAAACCGA+TGG | 0.624897 | 7_2:-74500291 | None:intergenic |
| AATAATAATGTATTGATTCG+GGG | 0.625695 | 7_2:+74497126 | Msa1076090:five_prime_UTR |
| GAAGATCCAAGGTCCGCAGT+TGG | 0.631346 | 7_2:-74503896 | None:intergenic |
| CAAGAGGACAAGCAGTAACA+GGG | 0.637270 | 7_2:-74500257 | None:intergenic |
| CAGGACATATCCAATAGGGA+AGG | 0.637784 | 7_2:+74502874 | Msa1076090:intron |
| AAATCGATCCATCTGACGTG+TGG | 0.639294 | 7_2:-74503277 | None:intergenic |
| CTTCTAGTCATGTTGAGCTG+AGG | 0.639397 | 7_2:+74500988 | Msa1076090:intron |
| CAGTCCAACCCCTAAAAGAG+AGG | 0.641615 | 7_2:+74504035 | Msa1076090:three_prime_UTR |
| GAGAGATCGATGGAGAGAGA+AGG | 0.643568 | 7_2:-74497288 | None:intergenic |
| AATGATAAGAGGTCTCGTCA+AGG | 0.647648 | 7_2:+74500345 | Msa1076090:CDS |
| AGAGGGAGAGAAATTCTTCG+AGG | 0.649454 | 7_2:-74497257 | None:intergenic |
| CCCTTAAAATTAAGACCTCG+AGG | 0.650083 | 7_2:-74502613 | None:intergenic |
| AATGATGAACTCAAGAGAGT+CGG | 0.654903 | 7_2:-74503941 | None:intergenic |
| CAATGAGGAAGGACAAGATG+CGG | 0.667114 | 7_2:+74503346 | Msa1076090:CDS |
| TCAAGATTCTCATAGCACAA+AGG | 0.675686 | 7_2:-74498222 | None:intergenic |
| GGATTGCATGCATCTCAAAG+AGG | 0.675810 | 7_2:+74502634 | Msa1076090:CDS |
| ACAAGATGCGGTGATTTACG+GGG | 0.689697 | 7_2:+74503358 | Msa1076090:CDS |
| CAATGGTGGGAATTTCCTCG+AGG | 0.701306 | 7_2:+74502598 | Msa1076090:CDS |
| AGAGAGAAGGACGATCGGAG+AGG | 0.701741 | 7_2:-74497275 | None:intergenic |
| AGTCAGAAAAGCTATCGTAG+AGG | 0.711886 | 7_2:+74500305 | Msa1076090:CDS |
| GATGGTTGACAAAATCCAAG+AGG | 0.724008 | 7_2:-74500273 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATAATAATGTATTGATT+CGG | + | chr7_2:74497124-74497143 | Msa1076090:five_prime_UTR | 10.0% |
| !! | TAAAATTAAACAAAAAACAA+AGG | - | chr7_2:74497528-74497547 | None:intergenic | 10.0% |
| !!! | ATTATTTTTTAATTCACAAA+GGG | - | chr7_2:74499370-74499389 | None:intergenic | 10.0% |
| !!! | TATTATTTTTTAATTCACAA+AGG | - | chr7_2:74499371-74499390 | None:intergenic | 10.0% |
| !!! | TTAAAAAATAATAATTTGCT+AGG | + | chr7_2:74499378-74499397 | Msa1076090:intron | 10.0% |
| !!! | TATTTATTTTTAATAACGAA+AGG | + | chr7_2:74500791-74500810 | Msa1076090:intron | 10.0% |
| !! | TTTCAACAAATATATTTAAA+AGG | - | chr7_2:74501578-74501597 | None:intergenic | 10.0% |
| !!! | TAATAATAATGTATTGATTC+GGG | + | chr7_2:74497125-74497144 | Msa1076090:five_prime_UTR | 15.0% |
| !! | ATAATCATAATTCAATTGTT+TGG | + | chr7_2:74497424-74497443 | Msa1076090:CDS | 15.0% |
| !! | AAATATAACATTGAAGTAAA+AGG | - | chr7_2:74498348-74498367 | None:intergenic | 15.0% |
| !!! | TTTTTGAAGAAAAATTCAAA+TGG | - | chr7_2:74498777-74498796 | None:intergenic | 15.0% |
| !! | TTAAAAAAGTTATAACAAAC+GGG | - | chr7_2:74498818-74498837 | None:intergenic | 15.0% |
| !! | CTTAAAAAAGTTATAACAAA+CGG | - | chr7_2:74498819-74498838 | None:intergenic | 15.0% |
| !!! | GCTTCTAAAAAAAATTATAT+AGG | + | chr7_2:74499084-74499103 | Msa1076090:intron | 15.0% |
| !! | GTACAATTGATATAATAATA+TGG | + | chr7_2:74499267-74499286 | Msa1076090:intron | 15.0% |
| !!! | AACAAATAATTAAGTTTGTT+TGG | - | chr7_2:74500006-74500025 | None:intergenic | 15.0% |
| !!! | CTGTTTTGTTTTTTTTAATA+AGG | + | chr7_2:74500214-74500233 | Msa1076090:intron | 15.0% |
| !! | TATTTAATGATATCATTGTT+CGG | + | chr7_2:74501682-74501701 | Msa1076090:intron | 15.0% |
| !! | ATAGAATCTAAATTAATTGA+AGG | - | chr7_2:74501712-74501731 | None:intergenic | 15.0% |
| !!! | AAGTAATTTTCTAGTATTAA+TGG | - | chr7_2:74502323-74502342 | None:intergenic | 15.0% |
| !! | TTGAAATTAATGCAAAATAT+GGG | - | chr7_2:74502389-74502408 | None:intergenic | 15.0% |
| !! | ATTGAAATTAATGCAAAATA+TGG | - | chr7_2:74502390-74502409 | None:intergenic | 15.0% |
| !! | TGTATTTAATTACATATTTC+TGG | + | chr7_2:74503006-74503025 | Msa1076090:intron | 15.0% |
| !! | GATTTACAAAAATAGATATA+TGG | + | chr7_2:74503518-74503537 | Msa1076090:intron | 15.0% |
| !!! | AATAATAATGTATTGATTCG+GGG | + | chr7_2:74497126-74497145 | Msa1076090:five_prime_UTR | 20.0% |
| !!! | TTTCTACTCTAAATCTTTTT+TGG | - | chr7_2:74497766-74497785 | None:intergenic | 20.0% |
| !!! | TATTTAATTTAATGTTGCCA+AGG | + | chr7_2:74498363-74498382 | Msa1076090:intron | 20.0% |
| !!! | TTTTTTCTTTCTGTTTTACA+GGG | - | chr7_2:74498499-74498518 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTTTCTGTTTTAC+AGG | - | chr7_2:74498500-74498519 | None:intergenic | 20.0% |
| !!! | GAGTTTTTTAGAACTTTTTA+TGG | - | chr7_2:74499142-74499161 | None:intergenic | 20.0% |
| !! | ACTGTGAAAGAAAAAAAAAA+CGG | - | chr7_2:74499678-74499697 | None:intergenic | 20.0% |
| !!! | CAGAAAATAGATTTTTTTAG+AGG | + | chr7_2:74499912-74499931 | Msa1076090:intron | 20.0% |
| !! | TTGGATACAACTATATAAAA+GGG | - | chr7_2:74499987-74500006 | None:intergenic | 20.0% |
| !! | TTTGGATACAACTATATAAA+AGG | - | chr7_2:74499988-74500007 | None:intergenic | 20.0% |
| !! | ATTTATGTTAGGATACAATA+AGG | - | chr7_2:74500194-74500213 | None:intergenic | 20.0% |
| !! | AAACAAAACAGATTTATGTT+AGG | - | chr7_2:74500205-74500224 | None:intergenic | 20.0% |
| !! | TTAATAAGGTCTATTAAACT+TGG | + | chr7_2:74500228-74500247 | Msa1076090:intron | 20.0% |
| !!! | TCTTAAATTCTATTTTTGCA+GGG | + | chr7_2:74500499-74500518 | Msa1076090:intron | 20.0% |
| !!! | ATTGAATTTTGCCTATATTT+TGG | - | chr7_2:74501651-74501670 | None:intergenic | 20.0% |
| !!! | GTATTCTCTTTTAACTTTAT+TGG | - | chr7_2:74501815-74501834 | None:intergenic | 20.0% |
| !! | ATAATTTACGCTTATTAGTA+AGG | - | chr7_2:74501837-74501856 | None:intergenic | 20.0% |
| !!! | TCTGAATAATAATTTTGCAA+TGG | + | chr7_2:74502120-74502139 | Msa1076090:intron | 20.0% |
| !!! | TTATTGTCCTTTTCAATTAA+TGG | - | chr7_2:74503435-74503454 | None:intergenic | 20.0% |
| !! | CAAATATGTGTAAATAGAAA+AGG | - | chr7_2:74503484-74503503 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTAAGAAGCAAAT+AGG | + | chr7_2:74503664-74503683 | Msa1076090:intron | 20.0% |
| !!! | CAGTTAACATTTATTTTGTT+CGG | - | chr7_2:74504226-74504245 | None:intergenic | 20.0% |
| !!! | AAATGTTAACTGATTTTTTC+AGG | + | chr7_2:74504234-74504253 | Msa1076090:three_prime_UTR | 20.0% |
| ! | ATAAAAAGTAAAAGTAGCGT+AGG | - | chr7_2:74497505-74497524 | None:intergenic | 25.0% |
| !! | CTTTTATTGTAGTCAATTGA+TGG | + | chr7_2:74497839-74497858 | Msa1076090:intron | 25.0% |
| ! | TGTTAAAAAGTGAAATCTCT+GGG | + | chr7_2:74498095-74498114 | Msa1076090:intron | 25.0% |
| ! | TTACATGAATCACTTATGAA+GGG | - | chr7_2:74498592-74498611 | None:intergenic | 25.0% |
| ! | ATTACATGAATCACTTATGA+AGG | - | chr7_2:74498593-74498612 | None:intergenic | 25.0% |
| ! | TGATTCATGTAATATGACAT+AGG | + | chr7_2:74498600-74498619 | Msa1076090:intron | 25.0% |
| !! | ATACTCCTAACACTATATTT+TGG | + | chr7_2:74498625-74498644 | Msa1076090:intron | 25.0% |
| !! | TTTGCGCATAATTAGTTTAA+TGG | + | chr7_2:74498661-74498680 | Msa1076090:intron | 25.0% |
| ! | GGTATTAAACCAAATTAAAC+CGG | + | chr7_2:74499105-74499124 | Msa1076090:intron | 25.0% |
| ! | GCTAGTTATTCATTGTAAAT+AGG | - | chr7_2:74499223-74499242 | None:intergenic | 25.0% |
| ! | TTATGCACTTATGTTTCAAT+TGG | - | chr7_2:74499410-74499429 | None:intergenic | 25.0% |
| ! | CATCATACTTCTTATAGATT+AGG | + | chr7_2:74499590-74499609 | Msa1076090:intron | 25.0% |
| ! | AAAAAAAACGGAAAAGAAGA+TGG | - | chr7_2:74499666-74499685 | None:intergenic | 25.0% |
| !!! | TATTTTAATCCGTAACAAAC+AGG | + | chr7_2:74500133-74500152 | Msa1076090:intron | 25.0% |
| ! | CAAAAGTTAATACACATTCA+GGG | - | chr7_2:74500159-74500178 | None:intergenic | 25.0% |
| ! | TTATCATTCCATGAATAGTT+AGG | - | chr7_2:74500333-74500352 | None:intergenic | 25.0% |
| ! | CTGCAAAAATAGAATTTAAG+AGG | - | chr7_2:74500500-74500519 | None:intergenic | 25.0% |
| !!! | CTCTTAAATTCTATTTTTGC+AGG | + | chr7_2:74500498-74500517 | Msa1076090:intron | 25.0% |
| ! | ATAAGTAATAAGGAAGAGAA+AGG | - | chr7_2:74500665-74500684 | None:intergenic | 25.0% |
| ! | GGAAACACTTATAAGTAATA+AGG | - | chr7_2:74500675-74500694 | None:intergenic | 25.0% |
| ! | CTTATCTCGATTTAATCATT+AGG | + | chr7_2:74501133-74501152 | Msa1076090:intron | 25.0% |
| ! | AGTTCATCAAAATCTCAAAT+GGG | - | chr7_2:74501341-74501360 | None:intergenic | 25.0% |
| ! | CTAAAATGTTTACAAGGAAA+AGG | + | chr7_2:74501417-74501436 | Msa1076090:intron | 25.0% |
| ! | CAAAAATTTGAACCAACAAA+TGG | - | chr7_2:74501454-74501473 | None:intergenic | 25.0% |
| !!! | CATTTGTTGGTTCAAATTTT+TGG | + | chr7_2:74501452-74501471 | Msa1076090:intron | 25.0% |
| !! | ATGTTGGAATTTTATTGCAT+GGG | - | chr7_2:74501535-74501554 | None:intergenic | 25.0% |
| ! | AAATTCCAACATGTTAATCT+AGG | + | chr7_2:74501543-74501562 | Msa1076090:intron | 25.0% |
| ! | AATTCCAACATGTTAATCTA+GGG | + | chr7_2:74501544-74501563 | Msa1076090:intron | 25.0% |
| !! | TGTTTATATTTGAAACCAGA+GGG | - | chr7_2:74501605-74501624 | None:intergenic | 25.0% |
| !! | TTGTTTATATTTGAAACCAG+AGG | - | chr7_2:74501606-74501625 | None:intergenic | 25.0% |
| ! | TTGTTTCGTAGAAATAAAAG+AGG | - | chr7_2:74501744-74501763 | None:intergenic | 25.0% |
| !!! | TATGGGAATTTACTTTTACT+CGG | - | chr7_2:74502372-74502391 | None:intergenic | 25.0% |
| ! | TAATTTCAATTTGCATTTGC+AGG | + | chr7_2:74502400-74502419 | Msa1076090:intron | 25.0% |
| ! | AATTTCAATTTGCATTTGCA+GGG | + | chr7_2:74502401-74502420 | Msa1076090:intron | 25.0% |
| !! | ACATAAAACCTTGATTTTTC+AGG | + | chr7_2:74502561-74502580 | Msa1076090:intron | 25.0% |
| ! | AAATTGCTTAAACATCTTGT+GGG | + | chr7_2:74502781-74502800 | Msa1076090:intron | 25.0% |
| ! | GTTAGATATTCTTTCGAATA+GGG | + | chr7_2:74503117-74503136 | Msa1076090:intron | 25.0% |
| ! | AAAACAATATTAAGAAACGC+AGG | - | chr7_2:74503808-74503827 | None:intergenic | 25.0% |
| !!! | TGCTTTAAAATTTATCCACT+AGG | + | chr7_2:74503829-74503848 | Msa1076090:intron | 25.0% |
| !!! | GCTTTAAAATTTATCCACTA+GGG | + | chr7_2:74503830-74503849 | Msa1076090:intron | 25.0% |
| !!! | CTTTAAAATTTATCCACTAG+GGG | + | chr7_2:74503831-74503850 | Msa1076090:intron | 25.0% |
| !!! | CTGATTTTTTCAGGTATTAT+TGG | + | chr7_2:74504243-74504262 | Msa1076090:three_prime_UTR | 25.0% |
| !!! | ATTTTTTCAGGTATTATTGG+TGG | + | chr7_2:74504246-74504265 | Msa1076090:three_prime_UTR | 25.0% |
| ATTGATGAAGAAGAAGAAGA+TGG | - | chr7_2:74497186-74497205 | None:intergenic | 30.0% | |
| ATCTTCTTCTTCTTCATCAA+TGG | + | chr7_2:74497185-74497204 | Msa1076090:CDS | 30.0% | |
| TGATTGAAGAAGATTCTCTA+AGG | - | chr7_2:74497313-74497332 | None:intergenic | 30.0% | |
| CAGTGAAAAAGTAAATCGAA+AGG | - | chr7_2:74497631-74497650 | None:intergenic | 30.0% | |
| AGTTCATGAACTACACTAAA+TGG | - | chr7_2:74497679-74497698 | None:intergenic | 30.0% | |
| TTAGTGTAGTTCATGAACTT+TGG | + | chr7_2:74497680-74497699 | Msa1076090:intron | 30.0% | |
| GTAGAAACTAAACGTGTTTA+TGG | + | chr7_2:74497779-74497798 | Msa1076090:intron | 30.0% | |
| CTGTTAAAAAGTGAAATCTC+TGG | + | chr7_2:74498094-74498113 | Msa1076090:intron | 30.0% | |
| AGCATGATAAGGAAATGATA+TGG | - | chr7_2:74498468-74498487 | None:intergenic | 30.0% | |
| TCGAACCAAAATATAGTGTT+AGG | - | chr7_2:74498633-74498652 | None:intergenic | 30.0% | |
| ! | TTTTACCCTGTAAACTTTGT+TGG | + | chr7_2:74498695-74498714 | Msa1076090:intron | 30.0% |
| ! | TTAGCTCTTTCTATCACAAA+AGG | + | chr7_2:74498739-74498758 | Msa1076090:intron | 30.0% |
| !!! | AGGAGCATAGTTTTAAAAAC+CGG | + | chr7_2:74498943-74498962 | Msa1076090:intron | 30.0% |
| GTAGATCAAATTTATCGATC+TGG | - | chr7_2:74499478-74499497 | None:intergenic | 30.0% | |
| TTGAAAGATTAGTGAACTGT+AGG | - | chr7_2:74499525-74499544 | None:intergenic | 30.0% | |
| !!! | CTAACCATAGTTTTAAAACC+CGG | - | chr7_2:74499881-74499900 | None:intergenic | 30.0% |
| TTTAGAGGAGAGAGAAAATA+AGG | + | chr7_2:74499927-74499946 | Msa1076090:intron | 30.0% | |
| TTAGAGGAGAGAGAAAATAA+GGG | + | chr7_2:74499928-74499947 | Msa1076090:intron | 30.0% | |
| CCAAAAGTTAATACACATTC+AGG | - | chr7_2:74500160-74500179 | None:intergenic | 30.0% | |
| ! | CCTGAATGTGTATTAACTTT+TGG | + | chr7_2:74500157-74500176 | Msa1076090:intron | 30.0% |
| ACTATTCATGGAATGATAAG+AGG | + | chr7_2:74500334-74500353 | Msa1076090:CDS | 30.0% | |
| ! | CTTTTCAGTTTTCAGTGATT+TGG | + | chr7_2:74500465-74500484 | Msa1076090:intron | 30.0% |
| CCATTCTCTCAATATTGTAA+AGG | - | chr7_2:74500544-74500563 | None:intergenic | 30.0% | |
| CCTTTACAATATTGAGAGAA+TGG | + | chr7_2:74500541-74500560 | Msa1076090:CDS | 30.0% | |
| AAAGGGAAAGGAAACAAATA+CGG | - | chr7_2:74500740-74500759 | None:intergenic | 30.0% | |
| TGATTAAATCGAGATAAGCA+GGG | - | chr7_2:74501131-74501150 | None:intergenic | 30.0% | |
| ATGATTAAATCGAGATAAGC+AGG | - | chr7_2:74501132-74501151 | None:intergenic | 30.0% | |
| AGAGATAAAGAAGTTAGATG+AGG | - | chr7_2:74501211-74501230 | None:intergenic | 30.0% | |
| TAACTTCTTTATCTCTTCGA+GGG | + | chr7_2:74501215-74501234 | Msa1076090:CDS | 30.0% | |
| TGATTGTAAAGTTCGTATAC+TGG | + | chr7_2:74501249-74501268 | Msa1076090:CDS | 30.0% | |
| ! | TAAAGTTCGTATACTGGTTA+AGG | + | chr7_2:74501255-74501274 | Msa1076090:CDS | 30.0% |
| CAGTTCATCAAAATCTCAAA+TGG | - | chr7_2:74501342-74501361 | None:intergenic | 30.0% | |
| !! | TTTGAGATTTTGATGAACTG+TGG | + | chr7_2:74501342-74501361 | Msa1076090:intron | 30.0% |
| TTCTCTATTCTACCAAATGT+GGG | - | chr7_2:74501395-74501414 | None:intergenic | 30.0% | |
| AGAAGGCTAAAATGTTTACA+AGG | + | chr7_2:74501411-74501430 | Msa1076090:intron | 30.0% | |
| ! | CATGTTGGAATTTTATTGCA+TGG | - | chr7_2:74501536-74501555 | None:intergenic | 30.0% |
| AACAACAAAAATCACCAGTT+TGG | + | chr7_2:74501621-74501640 | Msa1076090:intron | 30.0% | |
| ! | TTGTTACTTATATTCGAAGC+TGG | + | chr7_2:74501859-74501878 | Msa1076090:intron | 30.0% |
| TAGACATCAACATCGTATAT+TGG | - | chr7_2:74501903-74501922 | None:intergenic | 30.0% | |
| !! | CATTTGACTTAAGTTTGTTG+AGG | + | chr7_2:74501923-74501942 | Msa1076090:intron | 30.0% |
| ! | TCTTTTCACCTTTTAATAGC+TGG | + | chr7_2:74502080-74502099 | Msa1076090:intron | 30.0% |
| TTTGCATACCAGCTATTAAA+AGG | - | chr7_2:74502091-74502110 | None:intergenic | 30.0% | |
| TTACTATCTCCTTCCTAATT+TGG | - | chr7_2:74502176-74502195 | None:intergenic | 30.0% | |
| CTTCTTGATATCTACTTATG+TGG | + | chr7_2:74502262-74502281 | Msa1076090:intron | 30.0% | |
| TCATCATCATATTCAATCAC+AGG | + | chr7_2:74502452-74502471 | Msa1076090:CDS | 30.0% | |
| !! | GGTTATAATAGATTTCTGGT+GGG | + | chr7_2:74502660-74502679 | Msa1076090:intron | 30.0% |
| CAAATTGCTTAAACATCTTG+TGG | + | chr7_2:74502780-74502799 | Msa1076090:intron | 30.0% | |
| ATTGGATATGTCCTGTTTAA+TGG | - | chr7_2:74502869-74502888 | None:intergenic | 30.0% | |
| TTAAACAGGACATATCCAAT+AGG | + | chr7_2:74502869-74502888 | Msa1076090:intron | 30.0% | |
| TAAACAGGACATATCCAATA+GGG | + | chr7_2:74502870-74502889 | Msa1076090:intron | 30.0% | |
| GGTTAGATATTCTTTCGAAT+AGG | + | chr7_2:74503116-74503135 | Msa1076090:intron | 30.0% | |
| TTAATGGCGACATTGAAAAT+TGG | - | chr7_2:74503419-74503438 | None:intergenic | 30.0% | |
| AATGTCGCCATTAATTGAAA+AGG | + | chr7_2:74503425-74503444 | Msa1076090:three_prime_UTR | 30.0% | |
| ! | AATAATCTAGTGAAGTTGGT+TGG | + | chr7_2:74503450-74503469 | Msa1076090:intron | 30.0% |
| CATATTTGTGCAGAAAATGA+CGG | + | chr7_2:74503496-74503515 | Msa1076090:intron | 30.0% | |
| TAGGCATATAGTAAATCTGT+TGG | + | chr7_2:74503683-74503702 | Msa1076090:intron | 30.0% | |
| ATCTGTTGGAAATTAGAGAT+AGG | + | chr7_2:74503697-74503716 | Msa1076090:intron | 30.0% | |
| TCTGTTGGAAATTAGAGATA+GGG | + | chr7_2:74503698-74503717 | Msa1076090:intron | 30.0% | |
| TAGGGATGAATCTAAAAGTT+AGG | + | chr7_2:74503716-74503735 | Msa1076090:intron | 30.0% | |
| CTAAGAAACATTGAATCACA+AGG | - | chr7_2:74503758-74503777 | None:intergenic | 30.0% | |
| GTTGAACAAAACTGATGAAA+TGG | - | chr7_2:74503784-74503803 | None:intergenic | 30.0% | |
| ATTAAAGTTGAGAAGATCCA+AGG | - | chr7_2:74503910-74503929 | None:intergenic | 30.0% | |
| !!! | AGCAATTTTGTTATTGCTCT+TGG | + | chr7_2:74503975-74503994 | Msa1076090:three_prime_UTR | 30.0% |
| CCATATACATTCTGCAAATA+TGG | - | chr7_2:74504004-74504023 | None:intergenic | 30.0% | |
| CCATATTTGCAGAATGTATA+TGG | + | chr7_2:74504001-74504020 | Msa1076090:three_prime_UTR | 30.0% | |
| CACAAAATTTCCTCGTTATA+TGG | - | chr7_2:74504069-74504088 | None:intergenic | 30.0% | |
| ! | GAAATTTTGTGCTCTCTTAT+TGG | + | chr7_2:74504078-74504097 | Msa1076090:three_prime_UTR | 30.0% |
| !! | TAATGTATTGATTCGGGGTA+TGG | + | chr7_2:74497131-74497150 | Msa1076090:exon | 35.0% |
| GAAGAAGAAGAAGATGGAAT+TGG | - | chr7_2:74497180-74497199 | None:intergenic | 35.0% | |
| !! | AATTTGTTTTCACTCAGCAC+CGG | - | chr7_2:74497878-74497897 | None:intergenic | 35.0% |
| CTACTGTTGTTGTGAAATTG+TGG | + | chr7_2:74497915-74497934 | Msa1076090:intron | 35.0% | |
| TCAAGATTCTCATAGCACAA+AGG | - | chr7_2:74498225-74498244 | None:intergenic | 35.0% | |
| ACTACTGCATTGTTAACCTT+GGG | - | chr7_2:74498264-74498283 | None:intergenic | 35.0% | |
| AACTACTGCATTGTTAACCT+TGG | - | chr7_2:74498265-74498284 | None:intergenic | 35.0% | |
| !! | GATCATTTTGAGGACATAAC+TGG | + | chr7_2:74498409-74498428 | Msa1076090:intron | 35.0% |
| TGATAAGGAAATGATATGGC+TGG | - | chr7_2:74498464-74498483 | None:intergenic | 35.0% | |
| ! | TCTTTCTGTTTTACAGGGAA+AGG | - | chr7_2:74498494-74498513 | None:intergenic | 35.0% |
| ACTTCAAATGAGAAGCTGTT+AGG | + | chr7_2:74498923-74498942 | Msa1076090:intron | 35.0% | |
| !!! | CATAGTTTTAAAAACCGGAC+CGG | + | chr7_2:74498948-74498967 | Msa1076090:intron | 35.0% |
| AGTTATACAACCGAGTAATC+CGG | - | chr7_2:74499062-74499081 | None:intergenic | 35.0% | |
| GATTACTCGGTTGTATAACT+CGG | + | chr7_2:74499062-74499081 | Msa1076090:intron | 35.0% | |
| CAAATTTATCGATCTGGAGA+AGG | - | chr7_2:74499472-74499491 | None:intergenic | 35.0% | |
| ! | GATTAGTGAACTGTAGGTTT+TGG | - | chr7_2:74499519-74499538 | None:intergenic | 35.0% |
| !!! | CGGGTTTTAAAACTATGGTT+AGG | + | chr7_2:74499879-74499898 | Msa1076090:intron | 35.0% |
| ! | TCTTGGATTTTGTCAACCAT+CGG | + | chr7_2:74500275-74500294 | Msa1076090:CDS | 35.0% |
| TTCCAACAATTTCCAGATCA+AGG | - | chr7_2:74500610-74500629 | None:intergenic | 35.0% | |
| ATCCATGTCAGAGCTTAAAA+GGG | - | chr7_2:74500757-74500776 | None:intergenic | 35.0% | |
| TATCCATGTCAGAGCTTAAA+AGG | - | chr7_2:74500758-74500777 | None:intergenic | 35.0% | |
| AAAACAAACGCTCAATCAAG+TGG | - | chr7_2:74501043-74501062 | None:intergenic | 35.0% | |
| AGGACAATTGTTTACTAGCT+CGG | - | chr7_2:74501191-74501210 | None:intergenic | 35.0% | |
| CTAACTTCTTTATCTCTTCG+AGG | + | chr7_2:74501214-74501233 | Msa1076090:CDS | 35.0% | |
| GTACACAATGCAAAAACTGT+TGG | - | chr7_2:74501319-74501338 | None:intergenic | 35.0% | |
| TTAGAAACAAGTCCCACATT+TGG | + | chr7_2:74501380-74501399 | Msa1076090:intron | 35.0% | |
| CTTCTCTATTCTACCAAATG+TGG | - | chr7_2:74501396-74501415 | None:intergenic | 35.0% | |
| CACATTTGGTAGAATAGAGA+AGG | + | chr7_2:74501394-74501413 | Msa1076090:intron | 35.0% | |
| GAGATCTAGTATCCATTTGT+TGG | + | chr7_2:74501439-74501458 | Msa1076090:intron | 35.0% | |
| !! | TGGTTCAAATTTTTGGACCA+TGG | + | chr7_2:74501459-74501478 | Msa1076090:intron | 35.0% |
| AACTCCCTAGATTAACATGT+TGG | - | chr7_2:74501551-74501570 | None:intergenic | 35.0% | |
| ! | ATTTGTTGAAATAGACCCTC+TGG | + | chr7_2:74501587-74501606 | Msa1076090:intron | 35.0% |
| AACAAAAATCACCAGTTTGG+TGG | + | chr7_2:74501624-74501643 | Msa1076090:intron | 35.0% | |
| !! | TATATTTTGGACCACCAAAC+TGG | - | chr7_2:74501638-74501657 | None:intergenic | 35.0% |
| ! | AGTTTGGTGGTCCAAAATAT+AGG | + | chr7_2:74501637-74501656 | Msa1076090:intron | 35.0% |
| TTACTTATATTCGAAGCTGG+AGG | + | chr7_2:74501862-74501881 | Msa1076090:intron | 35.0% | |
| TACTTATATTCGAAGCTGGA+GGG | + | chr7_2:74501863-74501882 | Msa1076090:intron | 35.0% | |
| CATCAACATCGTATATTGGT+GGG | - | chr7_2:74501899-74501918 | None:intergenic | 35.0% | |
| ACATCAACATCGTATATTGG+TGG | - | chr7_2:74501900-74501919 | None:intergenic | 35.0% | |
| AGCTATGTATGCACTCAATT+TGG | + | chr7_2:74502002-74502021 | Msa1076090:intron | 35.0% | |
| AAATTGCCTCAAGCCAAATT+AGG | + | chr7_2:74502160-74502179 | Msa1076090:intron | 35.0% | |
| ! | CTTTGGTTCAAATGAGGAAA+GGG | - | chr7_2:74502212-74502231 | None:intergenic | 35.0% |
| ! | TCTTTGGTTCAAATGAGGAA+AGG | - | chr7_2:74502213-74502232 | None:intergenic | 35.0% |
| ! | GATACTCTTTGGTTCAAATG+AGG | - | chr7_2:74502218-74502237 | None:intergenic | 35.0% |
| !! | TTTGAACCAAAGAGTATCAG+AGG | + | chr7_2:74502220-74502239 | Msa1076090:intron | 35.0% |
| ATTTGCATTTGCAGGGATTT+CGG | + | chr7_2:74502408-74502427 | Msa1076090:intron | 35.0% | |
| CAATCACAGGAAGTTTCTTA+AGG | + | chr7_2:74502465-74502484 | Msa1076090:CDS | 35.0% | |
| ! | TCCTCGAGGTCTTAATTTTA+AGG | + | chr7_2:74502612-74502631 | Msa1076090:CDS | 35.0% |
| ! | CCTCGAGGTCTTAATTTTAA+GGG | + | chr7_2:74502613-74502632 | Msa1076090:CDS | 35.0% |
| GTGGGGTTATAATAGATTTC+TGG | + | chr7_2:74502656-74502675 | Msa1076090:intron | 35.0% | |
| ! | GGGTTATAATAGATTTCTGG+TGG | + | chr7_2:74502659-74502678 | Msa1076090:intron | 35.0% |
| ! | TAGCATTTCAGAGACAGTTT+TGG | - | chr7_2:74502701-74502720 | None:intergenic | 35.0% |
| !! | TTGTTGATAGCGATTCTTGA+AGG | + | chr7_2:74502751-74502770 | Msa1076090:CDS | 35.0% |
| TTAAACATCTTGTGGGTACA+TGG | + | chr7_2:74502788-74502807 | Msa1076090:intron | 35.0% | |
| CAGTATTATGCCTATAAAGC+AGG | + | chr7_2:74503039-74503058 | Msa1076090:intron | 35.0% | |
| ! | TATGCCTATAAAGCAGGTTT+TGG | + | chr7_2:74503045-74503064 | Msa1076090:CDS | 35.0% |
| ATATCTAACCTTCCTTCTGA+TGG | - | chr7_2:74503106-74503125 | None:intergenic | 35.0% | |
| TATTCTTTCGAATAGGGTCA+TGG | + | chr7_2:74503123-74503142 | Msa1076090:intron | 35.0% | |
| ATTCTTTCGAATAGGGTCAT+GGG | + | chr7_2:74503124-74503143 | Msa1076090:intron | 35.0% | |
| CGACATTGAAAATTGGTTAC+AGG | - | chr7_2:74503412-74503431 | None:intergenic | 35.0% | |
| GGACAATAATCTAGTGAAGT+TGG | + | chr7_2:74503446-74503465 | Msa1076090:three_prime_UTR | 35.0% | |
| AAATAGATATATGGTGCCCT+TGG | + | chr7_2:74503527-74503546 | Msa1076090:intron | 35.0% | |
| AATAGATATATGGTGCCCTT+GGG | + | chr7_2:74503528-74503547 | Msa1076090:intron | 35.0% | |
| ! | GCTTTTGTAGATGATTGTGA+AGG | + | chr7_2:74503567-74503586 | Msa1076090:intron | 35.0% |
| ATTGTGAAGGAATAGATGCA+TGG | + | chr7_2:74503580-74503599 | Msa1076090:intron | 35.0% | |
| ATGGTTGACATGTGACAAAT+AGG | + | chr7_2:74503627-74503646 | Msa1076090:intron | 35.0% | |
| AATGATGAACTCAAGAGAGT+CGG | - | chr7_2:74503944-74503963 | None:intergenic | 35.0% | |
| ! | AAAATCCACCTCTCTTTTAG+GGG | - | chr7_2:74504046-74504065 | None:intergenic | 35.0% |
| ! | GAAAATCCACCTCTCTTTTA+GGG | - | chr7_2:74504047-74504066 | None:intergenic | 35.0% |
| AATAGACAGCTAGTGTCAAA+GGG | - | chr7_2:74504145-74504164 | None:intergenic | 35.0% | |
| AAATAGACAGCTAGTGTCAA+AGG | - | chr7_2:74504146-74504165 | None:intergenic | 35.0% | |
| !! | ATTGATTCGGGGTATGGATA+CGG | + | chr7_2:74497137-74497156 | Msa1076090:exon | 40.0% |
| GAAGATGGAATTGGAATCTC+AGG | - | chr7_2:74497171-74497190 | None:intergenic | 40.0% | |
| TCCATCACAAAACCCTAGAA+TGG | + | chr7_2:74497221-74497240 | Msa1076090:CDS | 40.0% | |
| !!! | TCCATTCTAGGGTTTTGTGA+TGG | - | chr7_2:74497225-74497244 | None:intergenic | 40.0% |
| CATGTTCGACTTCCATTCTA+GGG | - | chr7_2:74497236-74497255 | None:intergenic | 40.0% | |
| ACATGTTCGACTTCCATTCT+AGG | - | chr7_2:74497237-74497256 | None:intergenic | 40.0% | |
| ! | ATTCTCTAAGGAGAGATCGA+TGG | - | chr7_2:74497301-74497320 | None:intergenic | 40.0% |
| AGAATCTGAGAGAACCTTGA+AGG | - | chr7_2:74497469-74497488 | None:intergenic | 40.0% | |
| TGATGGTTGTACTTGTTTGC+CGG | + | chr7_2:74497856-74497875 | Msa1076090:intron | 40.0% | |
| !! | GAAATCTCTGGGTACTGATT+AGG | + | chr7_2:74498106-74498125 | Msa1076090:intron | 40.0% |
| GCTAAAAAATGAGCAAGCAG+CGG | - | chr7_2:74498187-74498206 | None:intergenic | 40.0% | |
| TTTGAGAACACTTGTTCCCA+AGG | + | chr7_2:74498245-74498264 | Msa1076090:CDS | 40.0% | |
| TATGATTCAACGAGCTGGAA+AGG | + | chr7_2:74498290-74498309 | Msa1076090:CDS | 40.0% | |
| GGCACTAAGGTATGAAAGTT+TGG | + | chr7_2:74498311-74498330 | Msa1076090:intron | 40.0% | |
| GCAGTTACTTGAAGTTTCCT+TGG | - | chr7_2:74498383-74498402 | None:intergenic | 40.0% | |
| ! | CTGCACAACTGATCATTTTG+AGG | + | chr7_2:74498399-74498418 | Msa1076090:intron | 40.0% |
| AAGGAAATGATATGGCTGGT+AGG | - | chr7_2:74498460-74498479 | None:intergenic | 40.0% | |
| GGGAAAGGTTAAGCATGATA+AGG | - | chr7_2:74498479-74498498 | None:intergenic | 40.0% | |
| GGAGAAAATCATTGCAGATG+AGG | - | chr7_2:74498571-74498590 | None:intergenic | 40.0% | |
| AAGCGCCAACAAAGTTTACA+GGG | - | chr7_2:74498703-74498722 | None:intergenic | 40.0% | |
| ! | AAAGCGCCAACAAAGTTTAC+AGG | - | chr7_2:74498704-74498723 | None:intergenic | 40.0% |
| ! | ATAACAAACGGGCTCTCAAA+TGG | - | chr7_2:74498807-74498826 | None:intergenic | 40.0% |
| TTTCATCCGGTTTAGTCATG+CGG | - | chr7_2:74499039-74499058 | None:intergenic | 40.0% | |
| ATGACTAAACCGGATGAAAC+CGG | + | chr7_2:74499040-74499059 | Msa1076090:intron | 40.0% | |
| CCAAATTAAACCGGTTGACT+CGG | + | chr7_2:74499114-74499133 | Msa1076090:intron | 40.0% | |
| ! | TTTTATGGATCCGAGTCAAC+CGG | - | chr7_2:74499127-74499146 | None:intergenic | 40.0% |
| CTGCTGCAATGAGAAAAGTA+GGG | - | chr7_2:74499433-74499452 | None:intergenic | 40.0% | |
| CAAAACGCTGCTTATTAACC+CGG | + | chr7_2:74499699-74499718 | Msa1076090:intron | 40.0% | |
| !!! | TTTTCACCGGTTCAATTGCA+CGG | + | chr7_2:74499782-74499801 | Msa1076090:intron | 40.0% |
| !!! | CATAGTTTTAAAACCCGGCT+CGG | - | chr7_2:74499876-74499895 | None:intergenic | 40.0% |
| GATGGTTGACAAAATCCAAG+AGG | - | chr7_2:74500276-74500295 | None:intergenic | 40.0% | |
| TTTCTGACTGTAGAAACCGA+TGG | - | chr7_2:74500294-74500313 | None:intergenic | 40.0% | |
| AGTCAGAAAAGCTATCGTAG+AGG | + | chr7_2:74500305-74500324 | Msa1076090:CDS | 40.0% | |
| AATGATAAGAGGTCTCGTCA+AGG | + | chr7_2:74500345-74500364 | Msa1076090:CDS | 40.0% | |
| ATGATAAGAGGTCTCGTCAA+GGG | + | chr7_2:74500346-74500365 | Msa1076090:CDS | 40.0% | |
| ! | TGCTGTTTAAGCCCTTTAAG+TGG | + | chr7_2:74500393-74500412 | Msa1076090:CDS | 40.0% |
| GCTGTTTAAGCCCTTTAAGT+GGG | + | chr7_2:74500394-74500413 | Msa1076090:CDS | 40.0% | |
| CTGTTTAAGCCCTTTAAGTG+GGG | + | chr7_2:74500395-74500414 | Msa1076090:CDS | 40.0% | |
| TTTCCAGATCAAGGAGAGAA+GGG | - | chr7_2:74500601-74500620 | None:intergenic | 40.0% | |
| ATTTCCAGATCAAGGAGAGA+AGG | - | chr7_2:74500602-74500621 | None:intergenic | 40.0% | |
| CTCCTTGATCTGGAAATTGT+TGG | + | chr7_2:74500605-74500624 | Msa1076090:CDS | 40.0% | |
| GTTCATAAGCAACTAGCAGT+GGG | - | chr7_2:74500696-74500715 | None:intergenic | 40.0% | |
| AGTTCATAAGCAACTAGCAG+TGG | - | chr7_2:74500697-74500716 | None:intergenic | 40.0% | |
| TGTCAGAGCTTAAAAGGGAA+AGG | - | chr7_2:74500752-74500771 | None:intergenic | 40.0% | |
| !! | TTCCCTTTTAAGCTCTGACA+TGG | + | chr7_2:74500752-74500771 | Msa1076090:intron | 40.0% |
| !!! | TTTTTCGAGTCTTCGAGAAC+AGG | + | chr7_2:74501059-74501078 | Msa1076090:CDS | 40.0% |
| ATTGTTTACTAGCTCGGAAC+AGG | - | chr7_2:74501185-74501204 | None:intergenic | 40.0% | |
| !!! | TTTTATGGACTGGGCTTCAA+TGG | - | chr7_2:74501499-74501518 | None:intergenic | 40.0% |
| !! | TTGGTGGAGTTTTATGGACT+GGG | - | chr7_2:74501508-74501527 | None:intergenic | 40.0% |
| ! | ATTTTATTGCATGGGCCAGT+TGG | - | chr7_2:74501527-74501546 | None:intergenic | 40.0% |
| TTCTACGAAACAACTCTCCA+CGG | + | chr7_2:74501751-74501770 | Msa1076090:intron | 40.0% | |
| ACTTATATTCGAAGCTGGAG+GGG | + | chr7_2:74501864-74501883 | Msa1076090:intron | 40.0% | |
| !! | ATTTGGCTTGAGGCAATTTC+TGG | - | chr7_2:74502159-74502178 | None:intergenic | 40.0% |
| TGCTTTCCTCTGATACTCTT+TGG | - | chr7_2:74502229-74502248 | None:intergenic | 40.0% | |
| AAGAGACGGATAGAATCTGA+AGG | - | chr7_2:74502522-74502541 | None:intergenic | 40.0% | |
| TATCCGTCTCTTGAGATAGT+CGG | + | chr7_2:74502530-74502549 | Msa1076090:intron | 40.0% | |
| CCAAGGTTCCTGAAAAATCA+AGG | - | chr7_2:74502572-74502591 | None:intergenic | 40.0% | |
| !!! | CCTTGATTTTTCAGGAACCT+TGG | + | chr7_2:74502569-74502588 | Msa1076090:intron | 40.0% |
| !!! | TGATTTTTCAGGAACCTTGG+AGG | + | chr7_2:74502572-74502591 | Msa1076090:intron | 40.0% |
| CCCTTAAAATTAAGACCTCG+AGG | - | chr7_2:74502616-74502635 | None:intergenic | 40.0% | |
| TCTCACTCTTGCCATTAAAC+AGG | + | chr7_2:74502855-74502874 | Msa1076090:intron | 40.0% | |
| ! | GTTGCTAATTTTTATCGCGC+TGG | + | chr7_2:74503179-74503198 | Msa1076090:intron | 40.0% |
| TCTACAAAAGCTTGTACCCT+AGG | - | chr7_2:74503558-74503577 | None:intergenic | 40.0% | |
| ! | TGACCTTTTGGTGAATGTCA+TGG | + | chr7_2:74503608-74503627 | Msa1076090:intron | 40.0% |
| CAACCATGACATTCACCAAA+AGG | - | chr7_2:74503614-74503633 | None:intergenic | 40.0% | |
| TCACAAGGAAAACAAGCTTC+TGG | - | chr7_2:74503743-74503762 | None:intergenic | 40.0% | |
| CTCTCTTGAGTTCATCATTG+TGG | + | chr7_2:74503945-74503964 | Msa1076090:three_prime_UTR | 40.0% | |
| ! | GGAAAATCCACCTCTCTTTT+AGG | - | chr7_2:74504048-74504067 | None:intergenic | 40.0% |
| !! | GGTGGATTTTCCATATAACG+AGG | + | chr7_2:74504056-74504075 | Msa1076090:three_prime_UTR | 40.0% |
| !! | TCTTATTGGCTCTAATGTGC+AGG | + | chr7_2:74504092-74504111 | Msa1076090:three_prime_UTR | 40.0% |
| !!! | CTAGGGTTTTGTGATGGACA+AGG | - | chr7_2:74497219-74497238 | None:intergenic | 45.0% |
| AGAGGGAGAGAAATTCTTCG+AGG | - | chr7_2:74497260-74497279 | None:intergenic | 45.0% | |
| ATCGATCGCGCTCTCAAAAT+GGG | + | chr7_2:74497354-74497373 | Msa1076090:CDS | 45.0% | |
| ATTATAAGCGCGTTTGCGAG+AGG | - | chr7_2:74497409-74497428 | None:intergenic | 45.0% | |
| GTTGTGAAATTGTGGCGCTA+TGG | + | chr7_2:74497923-74497942 | Msa1076090:intron | 45.0% | |
| TTGACAACAGTGAATAGCGC+TGG | + | chr7_2:74498036-74498055 | Msa1076090:intron | 45.0% | |
| TGACAACAGTGAATAGCGCT+GGG | + | chr7_2:74498037-74498056 | Msa1076090:intron | 45.0% | |
| CTGGGGGAAACTGCTAATTT+AGG | + | chr7_2:74498055-74498074 | Msa1076090:intron | 45.0% | |
| TCCAGCTCGTTGAATCATAG+TGG | - | chr7_2:74498289-74498308 | None:intergenic | 45.0% | |
| GTTGAACCGCATGACTAAAC+CGG | + | chr7_2:74499030-74499049 | Msa1076090:intron | 45.0% | |
| ! | CCGAGTCAACCGGTTTAATT+TGG | - | chr7_2:74499117-74499136 | None:intergenic | 45.0% |
| ATTCACAAAGGGAACACGTG+AGG | - | chr7_2:74499359-74499378 | None:intergenic | 45.0% | |
| GCTGCTGCAATGAGAAAAGT+AGG | - | chr7_2:74499434-74499453 | None:intergenic | 45.0% | |
| TTTATCGATCTGGAGAAGGC+AGG | - | chr7_2:74499468-74499487 | None:intergenic | 45.0% | |
| ATGGAGAGATCAGCAAGGAT+AGG | - | chr7_2:74499639-74499658 | None:intergenic | 45.0% | |
| TATCCTTGCTGATCTCTCCA+TGG | + | chr7_2:74499638-74499657 | Msa1076090:intron | 45.0% | |
| CGGAAAAGAAGATGGTTCCA+TGG | - | chr7_2:74499658-74499677 | None:intergenic | 45.0% | |
| CGGTAAAAATCGGTGGAAAC+CGG | - | chr7_2:74499751-74499770 | None:intergenic | 45.0% | |
| !! | CATGACTCGGTAAAAATCGG+TGG | - | chr7_2:74499758-74499777 | None:intergenic | 45.0% |
| !! | CGGCATGACTCGGTAAAAAT+CGG | - | chr7_2:74499761-74499780 | None:intergenic | 45.0% |
| ! | CGATTTTTACCGAGTCATGC+CGG | + | chr7_2:74499759-74499778 | Msa1076090:intron | 45.0% |
| GCAATTGAACCGGTGAAAAC+CGG | - | chr7_2:74499781-74499800 | None:intergenic | 45.0% | |
| GTTCGAGCTGATCATTGGAT+CGG | - | chr7_2:74499808-74499827 | None:intergenic | 45.0% | |
| ATCCAATGATCAGCTCGAAC+CGG | + | chr7_2:74499808-74499827 | Msa1076090:intron | 45.0% | |
| !!! | CGAGCCGGGTTTTAAAACTA+TGG | + | chr7_2:74499874-74499893 | Msa1076090:intron | 45.0% |
| ! | CATTCAGGGCCTGTTTGTTA+CGG | - | chr7_2:74500145-74500164 | None:intergenic | 45.0% |
| CAAGAGGACAAGCAGTAACA+GGG | - | chr7_2:74500260-74500279 | None:intergenic | 45.0% | |
| !! | TAGAGGCGCCTAACTATTCA+TGG | + | chr7_2:74500322-74500341 | Msa1076090:CDS | 45.0% |
| TTAAGCCCTTTAAGTGGGGA+TGG | + | chr7_2:74500399-74500418 | Msa1076090:CDS | 45.0% | |
| AGTCCATGAGAAACATACCC+TGG | - | chr7_2:74500432-74500451 | None:intergenic | 45.0% | |
| CTTCTAGTCATGTTGAGCTG+AGG | + | chr7_2:74500988-74501007 | Msa1076090:intron | 45.0% | |
| GGCTTCAATGGTCAAAGCTT+GGG | - | chr7_2:74501487-74501506 | None:intergenic | 45.0% | |
| !! | GTTGGTGGAGTTTTATGGAC+TGG | - | chr7_2:74501509-74501528 | None:intergenic | 45.0% |
| GTCCATAAAACTCCACCAAC+TGG | + | chr7_2:74501509-74501528 | Msa1076090:intron | 45.0% | |
| ATTCTGCAAAATGTCCTCCG+TGG | - | chr7_2:74501771-74501790 | None:intergenic | 45.0% | |
| CTTATATTCGAAGCTGGAGG+GGG | + | chr7_2:74501865-74501884 | Msa1076090:intron | 45.0% | |
| !! | AGTTTGTTGAGGCATCTGTG+AGG | + | chr7_2:74501934-74501953 | Msa1076090:intron | 45.0% |
| ! | GTTTGTTGAGGCATCTGTGA+GGG | + | chr7_2:74501935-74501954 | Msa1076090:intron | 45.0% |
| TGCCTCAAGCCAAATTAGGA+AGG | + | chr7_2:74502164-74502183 | Msa1076090:intron | 45.0% | |
| !! | CTCCTTCCTAATTTGGCTTG+AGG | - | chr7_2:74502169-74502188 | None:intergenic | 45.0% |
| ! | AGAGTATCAGAGGAAAGCAG+TGG | + | chr7_2:74502230-74502249 | Msa1076090:intron | 45.0% |
| GAACCGACTATCTCAAGAGA+CGG | - | chr7_2:74502536-74502555 | None:intergenic | 45.0% | |
| GGATTGCATGCATCTCAAAG+AGG | + | chr7_2:74502634-74502653 | Msa1076090:CDS | 45.0% | |
| TTGCATGCATCTCAAAGAGG+TGG | + | chr7_2:74502637-74502656 | Msa1076090:intron | 45.0% | |
| TGCATGCATCTCAAAGAGGT+GGG | + | chr7_2:74502638-74502657 | Msa1076090:intron | 45.0% | |
| CAGGACATATCCAATAGGGA+AGG | + | chr7_2:74502874-74502893 | Msa1076090:intron | 45.0% | |
| ACATGCTAAGCCTTCCCTAT+TGG | - | chr7_2:74502887-74502906 | None:intergenic | 45.0% | |
| ! | ATCACAGGTGCTACAACTCT+AGG | + | chr7_2:74502920-74502939 | Msa1076090:CDS | 45.0% |
| !! | GCCTATAAAGCAGGTTTTGG+AGG | + | chr7_2:74503048-74503067 | Msa1076090:CDS | 45.0% |
| GCCTCCAAAACCTGCTTTAT+AGG | - | chr7_2:74503052-74503071 | None:intergenic | 45.0% | |
| !!! | TAAAGCAGGTTTTGGAGGCA+AGG | + | chr7_2:74503053-74503072 | Msa1076090:CDS | 45.0% |
| TTTAGCAACCACACGTCAGA+TGG | + | chr7_2:74503269-74503288 | Msa1076090:CDS | 45.0% | |
| AAATCGATCCATCTGACGTG+TGG | - | chr7_2:74503280-74503299 | None:intergenic | 45.0% | |
| TACTACAGCGACCATGTTAG+TGG | + | chr7_2:74503323-74503342 | Msa1076090:CDS | 45.0% | |
| CTTCCTCATTGCCACTAACA+TGG | - | chr7_2:74503337-74503356 | None:intergenic | 45.0% | |
| CATGTTAGTGGCAATGAGGA+AGG | + | chr7_2:74503335-74503354 | Msa1076090:CDS | 45.0% | |
| CAATGAGGAAGGACAAGATG+CGG | + | chr7_2:74503346-74503365 | Msa1076090:CDS | 45.0% | |
| GGACAAGATGCGGTGATTTA+CGG | + | chr7_2:74503356-74503375 | Msa1076090:CDS | 45.0% | |
| GACAAGATGCGGTGATTTAC+GGG | + | chr7_2:74503357-74503376 | Msa1076090:CDS | 45.0% | |
| ACAAGATGCGGTGATTTACG+GGG | + | chr7_2:74503358-74503377 | Msa1076090:CDS | 45.0% | |
| TTACGGGGAAAGTTCAGATG+AGG | + | chr7_2:74503373-74503392 | Msa1076090:CDS | 45.0% | |
| ! | TGCATGGTGTTCTGACCTTT+TGG | + | chr7_2:74503596-74503615 | Msa1076090:intron | 45.0% |
| !! | TCTCTTTTAGGGGTTGGACT+GGG | - | chr7_2:74504036-74504055 | None:intergenic | 45.0% |
| GATGGAGAGAGAAGGACGAT+CGG | - | chr7_2:74497283-74497302 | None:intergenic | 50.0% | |
| GAGAGATCGATGGAGAGAGA+AGG | - | chr7_2:74497291-74497310 | None:intergenic | 50.0% | |
| CATCGATCGCGCTCTCAAAA+TGG | + | chr7_2:74497353-74497372 | Msa1076090:CDS | 50.0% | |
| AGAACCTTGAAGGTGAGGTC+AGG | - | chr7_2:74497459-74497478 | None:intergenic | 50.0% | |
| CTGAGAGAACCTTGAAGGTG+AGG | - | chr7_2:74497464-74497483 | None:intergenic | 50.0% | |
| GACAACAGTGAATAGCGCTG+GGG | + | chr7_2:74498038-74498057 | Msa1076090:intron | 50.0% | |
| ! | ACAACAGTGAATAGCGCTGG+GGG | + | chr7_2:74498039-74498058 | Msa1076090:intron | 50.0% |
| AAGCAGCGGATACAAAGCAC+AGG | - | chr7_2:74498173-74498192 | None:intergenic | 50.0% | |
| GCCACTATGATTCAACGAGC+TGG | + | chr7_2:74498285-74498304 | Msa1076090:CDS | 50.0% | |
| !! | AACGAGCTGGAAAGGCACTA+AGG | + | chr7_2:74498298-74498317 | Msa1076090:CDS | 50.0% |
| TCACTGGGTCACTGAGTCAT+TGG | + | chr7_2:74498988-74499007 | Msa1076090:intron | 50.0% | |
| CCGAGTAATCCGGTTTCATC+CGG | - | chr7_2:74499052-74499071 | None:intergenic | 50.0% | |
| CCGGATGAAACCGGATTACT+CGG | + | chr7_2:74499049-74499068 | Msa1076090:intron | 50.0% | |
| TGGAGAAGGCAGGAAGGAAA+CGG | - | chr7_2:74499458-74499477 | None:intergenic | 50.0% | |
| TCAGCAAGGATAGGAAGCAG+AGG | - | chr7_2:74499630-74499649 | None:intergenic | 50.0% | |
| GTTCCATGGAGAGATCAGCA+AGG | - | chr7_2:74499644-74499663 | None:intergenic | 50.0% | |
| TCCAATGATCAGCTCGAACC+GGG | + | chr7_2:74499809-74499828 | Msa1076090:intron | 50.0% | |
| !!! | TTTTAAAACCCGGCTCGGAC+CGG | - | chr7_2:74499871-74499890 | None:intergenic | 50.0% |
| CCAAGAGGACAAGCAGTAAC+AGG | - | chr7_2:74500261-74500280 | None:intergenic | 50.0% | |
| CCTGTTACTGCTTGTCCTCT+TGG | + | chr7_2:74500258-74500277 | Msa1076090:CDS | 50.0% | |
| CACCACCATCCCCACTTAAA+GGG | - | chr7_2:74500407-74500426 | None:intergenic | 50.0% | |
| GCACCAGGGTATGTTTCTCA+TGG | + | chr7_2:74500426-74500445 | Msa1076090:intron | 50.0% | |
| ! | GCAGAAAGCATGAGCAGACA+GGG | - | chr7_2:74500900-74500919 | None:intergenic | 50.0% |
| ! | AGCAGAAAGCATGAGCAGAC+AGG | - | chr7_2:74500901-74500920 | None:intergenic | 50.0% |
| ! | GGGACGCAAAGTGTCTTCAA+AGG | - | chr7_2:74501111-74501130 | None:intergenic | 50.0% |
| GATGAACTGTGGCAGTGTCT+TGG | + | chr7_2:74501353-74501372 | Msa1076090:intron | 50.0% | |
| TGGTCAAAGCTTGGGATCCA+TGG | - | chr7_2:74501479-74501498 | None:intergenic | 50.0% | |
| GGGCTTCAATGGTCAAAGCT+TGG | - | chr7_2:74501488-74501507 | None:intergenic | 50.0% | |
| !!! | GGCCAGTTGGTGGAGTTTTA+TGG | - | chr7_2:74501514-74501533 | None:intergenic | 50.0% |
| TTATTGCATGGGCCAGTTGG+TGG | - | chr7_2:74501524-74501543 | None:intergenic | 50.0% | |
| TACGAAACAACTCTCCACGG+AGG | + | chr7_2:74501754-74501773 | Msa1076090:intron | 50.0% | |
| ! | TTGAGGCATCTGTGAGGGAA+AGG | + | chr7_2:74501940-74501959 | Msa1076090:intron | 50.0% |
| ! | CAATGGTGGGAATTTCCTCG+AGG | + | chr7_2:74502598-74502617 | Msa1076090:CDS | 50.0% |
| GCATGCATCTCAAAGAGGTG+GGG | + | chr7_2:74502639-74502658 | Msa1076090:intron | 50.0% | |
| ATGCGCAGATCGAAGTTGCT+AGG | + | chr7_2:74502728-74502747 | Msa1076090:intron | 50.0% | |
| GCTTAGCATGTGAAGCTGAC+TGG | + | chr7_2:74502896-74502915 | Msa1076090:CDS | 50.0% | |
| GTGAAGCTGACTGGTATCAC+AGG | + | chr7_2:74502905-74502924 | Msa1076090:CDS | 50.0% | |
| ! | CGGAGTATCCATCAGAAGGA+AGG | + | chr7_2:74503095-74503114 | Msa1076090:CDS | 50.0% |
| CGACCATGTTAGTGGCAATG+AGG | + | chr7_2:74503331-74503350 | Msa1076090:CDS | 50.0% | |
| TGTACCCTAGGTCAACCCAA+GGG | - | chr7_2:74503546-74503565 | None:intergenic | 50.0% | |
| TTGTACCCTAGGTCAACCCA+AGG | - | chr7_2:74503547-74503566 | None:intergenic | 50.0% | |
| TTATCCACTAGGGGAGCAGT+AGG | + | chr7_2:74503840-74503859 | Msa1076090:intron | 50.0% | |
| TATCCACTAGGGGAGCAGTA+GGG | + | chr7_2:74503841-74503860 | Msa1076090:intron | 50.0% | |
| GTAGGGGAAGAAGGATATGC+CGG | + | chr7_2:74503858-74503877 | Msa1076090:three_prime_UTR | 50.0% | |
| !! | TTTTAGGGGTTGGACTGGGA+TGG | - | chr7_2:74504032-74504051 | None:intergenic | 50.0% |
| !! | CTCTCTTTTAGGGGTTGGAC+TGG | - | chr7_2:74504037-74504056 | None:intergenic | 50.0% |
| CAGTCCAACCCCTAAAAGAG+AGG | + | chr7_2:74504035-74504054 | Msa1076090:three_prime_UTR | 50.0% | |
| TCCAACCCCTAAAAGAGAGG+TGG | + | chr7_2:74504038-74504057 | Msa1076090:three_prime_UTR | 50.0% | |
| !! | TCCACCTCTCTTTTAGGGGT+TGG | - | chr7_2:74504042-74504061 | None:intergenic | 50.0% |
| GAGAGAAGGACGATCGGAGA+GGG | - | chr7_2:74497277-74497296 | None:intergenic | 55.0% | |
| AGAGAGAAGGACGATCGGAG+AGG | - | chr7_2:74497278-74497297 | None:intergenic | 55.0% | |
| !! | TCGATGAGATCGGTGTCAGC+AGG | - | chr7_2:74497339-74497358 | None:intergenic | 55.0% |
| ! | GAGAGCGCGATCGATGAGAT+CGG | - | chr7_2:74497349-74497368 | None:intergenic | 55.0% |
| !! | GCGTTTGCGAGAGGAGTGTT+TGG | - | chr7_2:74497400-74497419 | None:intergenic | 55.0% |
| AAGGTGAGGTCAGGAGGAAG+AGG | - | chr7_2:74497450-74497469 | None:intergenic | 55.0% | |
| TCCTCCTGACCTCACCTTCA+AGG | + | chr7_2:74497452-74497471 | Msa1076090:CDS | 55.0% | |
| ACCTTGAAGGTGAGGTCAGG+AGG | - | chr7_2:74497456-74497475 | None:intergenic | 55.0% | |
| TGGTCGAACCACTGAGTCAC+TGG | + | chr7_2:74499008-74499027 | Msa1076090:intron | 55.0% | |
| CGGTTCAACCAGTGACTCAG+TGG | - | chr7_2:74499019-74499038 | None:intergenic | 55.0% | |
| TCGATCTGGAGAAGGCAGGA+AGG | - | chr7_2:74499464-74499483 | None:intergenic | 55.0% | |
| CGCTGCTTATTAACCCGGTC+CGG | + | chr7_2:74499704-74499723 | Msa1076090:intron | 55.0% | |
| ATCGGTGGAAACCGGTGACT+CGG | - | chr7_2:74499743-74499762 | None:intergenic | 55.0% | |
| CGGTGAAAACCGGCATGACT+CGG | - | chr7_2:74499771-74499790 | None:intergenic | 55.0% | |
| !!! | CGAGTCATGCCGGTTTTCAC+CGG | + | chr7_2:74499769-74499788 | Msa1076090:intron | 55.0% |
| GATCGGCCGTGCAATTGAAC+CGG | - | chr7_2:74499791-74499810 | None:intergenic | 55.0% | |
| ! | ACCCGGTTCGAGCTGATCAT+TGG | - | chr7_2:74499813-74499832 | None:intergenic | 55.0% |
| AGCCCTTTAAGTGGGGATGG+TGG | + | chr7_2:74500402-74500421 | Msa1076090:CDS | 55.0% | |
| GCACCACCATCCCCACTTAA+AGG | - | chr7_2:74500408-74500427 | None:intergenic | 55.0% | |
| GTGCCCTTCTCTCCTTGATC+TGG | + | chr7_2:74500595-74500614 | Msa1076090:CDS | 55.0% | |
| AGGAACCTTGGAGGCTGCAA+TGG | + | chr7_2:74502581-74502600 | Msa1076090:intron | 55.0% | |
| AACCTTGGAGGCTGCAATGG+TGG | + | chr7_2:74502584-74502603 | Msa1076090:CDS | 55.0% | |
| ACCTTGGAGGCTGCAATGGT+GGG | + | chr7_2:74502585-74502604 | Msa1076090:CDS | 55.0% | |
| ! | GTGGCGGAGTATCCATCAGA+AGG | + | chr7_2:74503091-74503110 | Msa1076090:CDS | 55.0% |
| ATCCACTAGGGGAGCAGTAG+GGG | + | chr7_2:74503842-74503861 | Msa1076090:intron | 55.0% | |
| AGAAGGATATGCCGGTCACC+AGG | + | chr7_2:74503866-74503885 | Msa1076090:three_prime_UTR | 55.0% | |
| !! | TTGGCGTTGATCCTGGTGAC+CGG | - | chr7_2:74503880-74503899 | None:intergenic | 55.0% |
| ACCAGGATCAACGCCAACTG+CGG | + | chr7_2:74503883-74503902 | Msa1076090:three_prime_UTR | 55.0% | |
| GAAGATCCAAGGTCCGCAGT+TGG | - | chr7_2:74503899-74503918 | None:intergenic | 55.0% | |
| !! | GTCGACTCGGCAAGGTCACT+GGG | + | chr7_2:74498973-74498992 | Msa1076090:intron | 60.0% |
| GCTCGAACCGGGTATACCAC+CGG | + | chr7_2:74499820-74499839 | Msa1076090:intron | 60.0% | |
| CCGTGAACCGGTGGTATACC+CGG | - | chr7_2:74499830-74499849 | None:intergenic | 60.0% | |
| !! | CCGGGTATACCACCGGTTCA+CGG | + | chr7_2:74499827-74499846 | Msa1076090:intron | 60.0% |
| TCCCACCATTGCAGCCTCCA+AGG | - | chr7_2:74502589-74502608 | None:intergenic | 60.0% | |
| !!! | CAGGTTTTGGAGGCAAGGCC+TGG | + | chr7_2:74503058-74503077 | Msa1076090:CDS | 60.0% |
| AAGGCCTGGTATGCGTGTGG+TGG | + | chr7_2:74503072-74503091 | Msa1076090:CDS | 60.0% | |
| !! | TGGTGCCCTTGGGTTGACCT+AGG | + | chr7_2:74503538-74503557 | Msa1076090:intron | 60.0% |
| !! | GGTGCCCTTGGGTTGACCTA+GGG | + | chr7_2:74503539-74503558 | Msa1076090:intron | 60.0% |
| TTCCCCTACTGCTCCCCTAG+TGG | - | chr7_2:74503847-74503866 | None:intergenic | 60.0% | |
| AGGGGAGCAGTAGGGGAAGA+AGG | + | chr7_2:74503849-74503868 | Msa1076090:intron | 60.0% | |
| !! | TCCGCAGTTGGCGTTGATCC+TGG | - | chr7_2:74503887-74503906 | None:intergenic | 60.0% |
| TCAACGCCAACTGCGGACCT+TGG | + | chr7_2:74503890-74503909 | Msa1076090:three_prime_UTR | 60.0% | |
| ! | AACCGGACCGGTCGTCGACT+CGG | + | chr7_2:74498960-74498979 | Msa1076090:intron | 65.0% |
| GACCTTGCCGAGTCGACGAC+CGG | - | chr7_2:74498970-74498989 | None:intergenic | 65.0% | |
| !! | CGTCGACTCGGCAAGGTCAC+TGG | + | chr7_2:74498972-74498991 | Msa1076090:intron | 65.0% |
| !! | ACTCGGCCGGTTTGGCGAAC+CGG | - | chr7_2:74499726-74499745 | None:intergenic | 65.0% |
| ! | AACCGGTGACTCGGCCGGTT+TGG | - | chr7_2:74499734-74499753 | None:intergenic | 65.0% |
| ! | GTGGAAACCGGTGACTCGGC+CGG | - | chr7_2:74499739-74499758 | None:intergenic | 65.0% |
| !! | CCACCGGTTCACGGTCCAAC+CGG | + | chr7_2:74499836-74499855 | Msa1076090:intron | 65.0% |
| CGACCGGTTGGACCGTGAAC+CGG | - | chr7_2:74499842-74499861 | None:intergenic | 65.0% | |
| CGGTTCACGGTCCAACCGGT+CGG | + | chr7_2:74499840-74499859 | Msa1076090:intron | 65.0% | |
| ! | AGTGGGGATGGTGGTGCACC+AGG | + | chr7_2:74500411-74500430 | Msa1076090:CDS | 65.0% |
| ! | GTGGGGATGGTGGTGCACCA+GGG | + | chr7_2:74500412-74500431 | Msa1076090:CDS | 65.0% |
| GGCAAGGCCTGGTATGCGTG+TGG | + | chr7_2:74503069-74503088 | Msa1076090:CDS | 65.0% | |
| GCCTGGTATGCGTGTGGTGG+CGG | + | chr7_2:74503075-74503094 | Msa1076090:CDS | 65.0% | |
| TCCGCCACCACACGCATACC+AGG | - | chr7_2:74503079-74503098 | None:intergenic | 65.0% | |
| ! | GGGGTTGGACTGGGATGGAG+TGG | - | chr7_2:74504027-74504046 | None:intergenic | 65.0% |
| TGCCGAGTCGACGACCGGTC+CGG | - | chr7_2:74498965-74498984 | None:intergenic | 70.0% | |
| !! | GACCGGTCGTCGACTCGGCA+AGG | + | chr7_2:74498965-74498984 | Msa1076090:intron | 70.0% |
| !! | CCGGTTTGGCGAACCGGACC+GGG | - | chr7_2:74499720-74499739 | None:intergenic | 70.0% |
| ! | CCCGGTCCGGTTCGCCAAAC+CGG | + | chr7_2:74499717-74499736 | Msa1076090:intron | 70.0% |
| !! | GCCGGTTTGGCGAACCGGAC+CGG | - | chr7_2:74499721-74499740 | None:intergenic | 70.0% |
| CGCCAAACCGGCCGAGTCAC+CGG | + | chr7_2:74499729-74499748 | Msa1076090:intron | 70.0% | |
| CCGGTTGGACCGTGAACCGG+TGG | - | chr7_2:74499839-74499858 | None:intergenic | 70.0% | |
| CACGGTCCAACCGGTCGGAC+CGG | + | chr7_2:74499845-74499864 | Msa1076090:intron | 70.0% | |
| !! | AAAACCCGGCTCGGACCGGC+CGG | - | chr7_2:74499867-74499886 | None:intergenic | 70.0% |
| GTCCAACCGGTCGGACCGGC+CGG | + | chr7_2:74499849-74499868 | Msa1076090:intron | 75.0% | |
| ! | GACCGGCCGGTCCGACCGGT+TGG | - | chr7_2:74499854-74499873 | None:intergenic | 80.0% |
| ! | CTCGGACCGGCCGGTCCGAC+CGG | - | chr7_2:74499858-74499877 | None:intergenic | 80.0% |
| ! | TCGGACCGGCCGGTCCGAGC+CGG | + | chr7_2:74499859-74499878 | Msa1076090:intron | 80.0% |
| ! | CGGACCGGCCGGTCCGAGCC+GGG | + | chr7_2:74499860-74499879 | Msa1076090:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 74497047 | 74504289 | 74497047 | ID=Msa1076090;Name=Msa1076090 |
| chr7_2 | mRNA | 74497047 | 74504289 | 74497047 | ID=Msa1076090-mRNA-1;Parent=Msa1076090;Name=Msa1076090-mRNA-1;_AED=0.10;_eAED=0.10;_QI=103|1|1|1|0.91|0.92|13|491|519 |
| chr7_2 | exon | 74497047 | 74497473 | 74497047 | ID=Msa1076090-mRNA-1:exon:17582;Parent=Msa1076090-mRNA-1 |
| chr7_2 | exon | 74498144 | 74498319 | 74498144 | ID=Msa1076090-mRNA-1:exon:17583;Parent=Msa1076090-mRNA-1 |
| chr7_2 | exon | 74500236 | 74500433 | 74500236 | ID=Msa1076090-mRNA-1:exon:17584;Parent=Msa1076090-mRNA-1 |
| chr7_2 | exon | 74500520 | 74500630 | 74500520 | ID=Msa1076090-mRNA-1:exon:17585;Parent=Msa1076090-mRNA-1 |
| chr7_2 | exon | 74500995 | 74501080 | 74500995 | ID=Msa1076090-mRNA-1:exon:17586;Parent=Msa1076090-mRNA-1 |
| chr7_2 | exon | 74501155 | 74501276 | 74501155 | ID=Msa1076090-mRNA-1:exon:17587;Parent=Msa1076090-mRNA-1 |
| chr7_2 | exon | 74502422 | 74502486 | 74502422 | ID=Msa1076090-mRNA-1:exon:17588;Parent=Msa1076090-mRNA-1 |
| chr7_2 | exon | 74502583 | 74502655 | 74502583 | ID=Msa1076090-mRNA-1:exon:17589;Parent=Msa1076090-mRNA-1 |
| chr7_2 | exon | 74502736 | 74502798 | 74502736 | ID=Msa1076090-mRNA-1:exon:17590;Parent=Msa1076090-mRNA-1 |
| chr7_2 | exon | 74502877 | 74502941 | 74502877 | ID=Msa1076090-mRNA-1:exon:17591;Parent=Msa1076090-mRNA-1 |
| chr7_2 | exon | 74503042 | 74503116 | 74503042 | ID=Msa1076090-mRNA-1:exon:17592;Parent=Msa1076090-mRNA-1 |
| chr7_2 | exon | 74503214 | 74503467 | 74503214 | ID=Msa1076090-mRNA-1:exon:17593;Parent=Msa1076090-mRNA-1 |
| chr7_2 | exon | 74503851 | 74504289 | 74503851 | ID=Msa1076090-mRNA-1:exon:17594;Parent=Msa1076090-mRNA-1 |
| chr7_2 | five_prime_UTR | 74497047 | 74497149 | 74497047 | ID=Msa1076090-mRNA-1:five_prime_utr;Parent=Msa1076090-mRNA-1 |
| chr7_2 | CDS | 74497150 | 74497473 | 74497150 | ID=Msa1076090-mRNA-1:cds;Parent=Msa1076090-mRNA-1 |
| chr7_2 | CDS | 74498144 | 74498319 | 74498144 | ID=Msa1076090-mRNA-1:cds;Parent=Msa1076090-mRNA-1 |
| chr7_2 | CDS | 74500236 | 74500433 | 74500236 | ID=Msa1076090-mRNA-1:cds;Parent=Msa1076090-mRNA-1 |
| chr7_2 | CDS | 74500520 | 74500630 | 74500520 | ID=Msa1076090-mRNA-1:cds;Parent=Msa1076090-mRNA-1 |
| chr7_2 | CDS | 74500995 | 74501080 | 74500995 | ID=Msa1076090-mRNA-1:cds;Parent=Msa1076090-mRNA-1 |
| chr7_2 | CDS | 74501155 | 74501276 | 74501155 | ID=Msa1076090-mRNA-1:cds;Parent=Msa1076090-mRNA-1 |
| chr7_2 | CDS | 74502422 | 74502486 | 74502422 | ID=Msa1076090-mRNA-1:cds;Parent=Msa1076090-mRNA-1 |
| chr7_2 | CDS | 74502583 | 74502655 | 74502583 | ID=Msa1076090-mRNA-1:cds;Parent=Msa1076090-mRNA-1 |
| chr7_2 | CDS | 74502736 | 74502798 | 74502736 | ID=Msa1076090-mRNA-1:cds;Parent=Msa1076090-mRNA-1 |
| chr7_2 | CDS | 74502877 | 74502941 | 74502877 | ID=Msa1076090-mRNA-1:cds;Parent=Msa1076090-mRNA-1 |
| chr7_2 | CDS | 74503042 | 74503116 | 74503042 | ID=Msa1076090-mRNA-1:cds;Parent=Msa1076090-mRNA-1 |
| chr7_2 | CDS | 74503214 | 74503415 | 74503214 | ID=Msa1076090-mRNA-1:cds;Parent=Msa1076090-mRNA-1 |
| chr7_2 | three_prime_UTR | 74503416 | 74503467 | 74503416 | ID=Msa1076090-mRNA-1:three_prime_utr;Parent=Msa1076090-mRNA-1 |
| chr7_2 | three_prime_UTR | 74503851 | 74504289 | 74503851 | ID=Msa1076090-mRNA-1:three_prime_utr;Parent=Msa1076090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
